Bhi02G000123 (gene) Wax gourd

Overview
NameBhi02G000123
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionBeta-glucosidase
Locationchr2 : 3152167 .. 3152414 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTACTACCATCCTCAATGCTATGAAGAATATGGTCGATCCTGCGACAAAGGTCATGTACAATGAGAATGCGGATGCGGGATTTGTCAAGTCGAACGGGTTCTCATATGCCATTGTCGTTTTGGGGGAGCCTCCTTATATTGAAATGTTTGGTGACGGCATGAATCTCTCCATTCCTGAACGTAGTCCAAGCACCATAAGAAATGTGTGCAGCAATATCAAATGTGTCATTATCATCATCTTTCGGTGA

mRNA sequence

GTACTACCATCCTCAATGCTATGAAGAATATGGTCGATCCTGCGACAAAGGTCATGTACAATGAGAATGCGGATGCGGGATTTGTCAAGTCGAACGGGTTCTCATATGCCATTGTCGTTTTGGGGGAGCCTCCTTATATTGAAATGTTTGGTGACGGCATGAATCTCTCCATTCCTGAACGTAGTCCAAGCACCATAAGAAATGTGTGCAGCAATATCAAATGTGTCATTATCATCATCTTTCGGTGA

Coding sequence (CDS)

GTACTACCATCCTCAATGCTATGAAGAATATGGTCGATCCTGCGACAAAGGTCATGTACAATGAGAATGCGGATGCGGGATTTGTCAAGTCGAACGGGTTCTCATATGCCATTGTCGTTTTGGGGGAGCCTCCTTATATTGAAATGTTTGGTGACGGCATGAATCTCTCCATTCCTGAACGTAGTCCAAGCACCATAAGAAATGTGTGCAGCAATATCAAATGTGTCATTATCATCATCTTTCGGTGA

Protein sequence

TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPERSPSTIRNVCSNIKCVIIIIFR
Homology
[Close]
BLAST of Bhi02G000123 vs. TAIR10
Match: AT5G20950.1 (Glycosyl hydrolase family protein)

HSP 1 Score: 103.2 bits (256), Expect = 7.6e-23
Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTIL A+KN V P T+V+Y++N DA FVKS  F YAIVV+GEPPY EMFGD  NL+I + 
Sbjct: 465 TTILAAVKNTVAPTTQVVYSQNPDANFVKSGKFDYAIVVVGEPPYAEMFGDTTNLTISDP 524

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PS I NVC ++KCV++++
Sbjct: 525 GPSIIGNVCGSVKCVVVVV 543

[Close]
BLAST of Bhi02G000123 vs. TAIR10
Match: AT5G20940.1 (Glycosyl hydrolase family protein)

HSP 1 Score: 100.1 bits (248), Expect = 6.5e-22
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTIL A+K  VDP T+V+YN+N D  FVK+  F YAIV +GE PY E FGD  NL+I E 
Sbjct: 471 TTILAAVKKTVDPKTQVIYNQNPDTNFVKAGDFDYAIVAVGEKPYAEGFGDSTNLTISEP 530

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI NVC+++KCV++++
Sbjct: 531 GPSTIGNVCASVKCVVVVV 549

[Close]
BLAST of Bhi02G000123 vs. TAIR10
Match: AT5G04885.1 (Glycosyl hydrolase family protein)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-18
Identity = 37/79 (46.84%), Postives = 58/79 (73.42%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TT+L+A+K+ VD +T+V++ EN DA F+KSN F+YAI+ +GEPPY E  GD   L++ + 
Sbjct: 469 TTLLSAVKSAVDQSTEVVFRENPDAEFIKSNNFAYAIIAVGEPPYAETAGDSDKLTMLDP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            P+ I + C  +KCV+++I
Sbjct: 529 GPAIISSTCQAVKCVVVVI 547

[Close]
BLAST of Bhi02G000123 vs. TAIR10
Match: AT3G62710.1 (Glycosyl hydrolase family protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.3e-11
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNG-FSYAIVVLGEPPYIEMFGDGMNLSIPE 60
           TTIL A++  VDP T+V+Y E  +    K +   +Y IVV+GE PY E FGD   L I +
Sbjct: 494 TTILEAIQKAVDPTTEVVYVEEPNQDTAKLHADAAYTIVVVGETPYAETFGDSPTLGITK 553

Query: 61  RSPSTIRNVC-SNIKCVIIII 80
             P T+ + C S +KC++I++
Sbjct: 554 PGPDTLSHTCGSGMKCLVILV 574

[Close]
BLAST of Bhi02G000123 vs. TAIR10
Match: AT3G47000.1 (Glycosyl hydrolase family protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-09
Identity = 32/80 (40.00%), Postives = 44/80 (55.00%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNEN-ADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPE 60
           TT+L+A+K  V   T+V+Y +  +      S GFSYAIV +GEPPY E  GD   L IP 
Sbjct: 449 TTLLDAIKEAVGDETEVIYEKTPSKETLASSEGFSYAIVAVGEPPYAETMGDNSELRIPF 508

Query: 61  RSPSTIRNVCSNIKCVIIII 80
                +  V   I  ++I+I
Sbjct: 509 NGTDIVTAVAEIIPTLVILI 528

[Close]
BLAST of Bhi02G000123 vs. TrEMBL
Match: tr|A0A1S3BXL6|A0A1S3BXL6_CUCME (beta-glucosidase BoGH3B-like OS=Cucumis melo OX=3656 GN=LOC103494201 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.3e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DAGFVKSN FSYAIVV+GEPPY E+ GD MNLSI E 
Sbjct: 469 TTILNAVKNTVDPVTQVVYNENPDAGFVKSNEFSYAIVVVGEPPYAEISGDSMNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]
BLAST of Bhi02G000123 vs. TrEMBL
Match: tr|A0A0A0LV53|A0A0A0LV53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025780 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-25
Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP+T+V+YNEN DAGFVKSN FSYAIVV+GEPPY E+ GD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPSTQVVYNENPDAGFVKSNEFSYAIVVVGEPPYAEISGDSTNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+ CV++++
Sbjct: 529 GPSTIKNVCSNVNCVVVVV 547

[Close]
BLAST of Bhi02G000123 vs. TrEMBL
Match: tr|A0A1U8BPC5|A0A1U8BPC5_NELNU (uncharacterized protein LOC104613042 OS=Nelumbo nucifera OX=4432 GN=LOC104613042 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.9e-25
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP+T+V+Y EN DA FVKSN FS+AIVV+GEPPY E FGD MNL IPE 
Sbjct: 468 TTILNAIKNTVDPSTQVVYKENPDANFVKSNKFSFAIVVVGEPPYAETFGDSMNLIIPEP 527

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI NVCS++KCV+I+I
Sbjct: 528 GPSTITNVCSSVKCVVILI 546

[Close]
BLAST of Bhi02G000123 vs. TrEMBL
Match: tr|A0A2C9V1F5|A0A2C9V1F5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G105100 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24
Identity = 55/79 (69.62%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TT+LNA+KN VDP+T+V+YNEN DA FVKSN FSYAIVV+GEPPY E FGD +NL+IPE 
Sbjct: 471 TTVLNAIKNTVDPSTQVVYNENPDANFVKSNKFSYAIVVVGEPPYAETFGDSLNLTIPEP 530

Query: 61  SPSTIRNVCSNIKCVIIII 80
             STI NVC+++KCV+I+I
Sbjct: 531 GSSTITNVCTSVKCVVIVI 549

[Close]
BLAST of Bhi02G000123 vs. TrEMBL
Match: tr|A0A059ABH4|A0A059ABH4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00605 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-24
Identity = 54/79 (68.35%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+K+ V P T+V+YNEN DA FVKSN F+YAIVV+GEPPY E FGD +NL+IPE 
Sbjct: 472 TTILNAVKSTVHPDTQVVYNENPDANFVKSNNFAYAIVVVGEPPYAETFGDSLNLTIPEP 531

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTIRNVC ++KCV+++I
Sbjct: 532 GPSTIRNVCGSVKCVVVVI 550

[Close]
BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_022988494.1 (uncharacterized protein LOC111485719 [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDPAT+V+YNEN DA FVKSN FSYAIVV+GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPATEVVYNENPDASFVKSNKFSYAIVVVGEPPYAEMFGDSSNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]
BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_008453517.1 (PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo] >XP_008453518.1 PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo])

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DAGFVKSN FSYAIVV+GEPPY E+ GD MNLSI E 
Sbjct: 469 TTILNAVKNTVDPVTQVVYNENPDAGFVKSNEFSYAIVVVGEPPYAEISGDSMNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI+NVCSN+KCV++++
Sbjct: 529 GPSTIKNVCSNVKCVVVVV 547

[Close]
BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_021692652.1 (uncharacterized protein LOC110673764 [Hevea brasiliensis] >XP_021692658.1 uncharacterized protein LOC110673764 [Hevea brasiliensis])

HSP 1 Score: 125.6 bits (314), Expect = 7.9e-26
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TT+LNA+KN VDPATKV+YN+N DA FVKSN FSYAIVV+GEPPY E FGD +NL+IPE 
Sbjct: 471 TTVLNAIKNTVDPATKVVYNKNPDANFVKSNKFSYAIVVVGEPPYAETFGDSLNLTIPEP 530

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTI NVC+++KCV+III
Sbjct: 531 GPSTITNVCTSVKCVVIII 549

[Close]
BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_022135118.1 (uncharacterized protein LOC111007174 [Momordica charantia] >XP_022135119.1 uncharacterized protein LOC111007174 [Momordica charantia])

HSP 1 Score: 125.6 bits (314), Expect = 7.9e-26
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDP T+V+YNEN DA FVKSN FSYAIV++GEPPY EMFGD  NLSI E 
Sbjct: 469 TTILNAVKNTVDPTTQVVYNENPDASFVKSNQFSYAIVIVGEPPYAEMFGDSTNLSISEP 528

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PSTIRNVCSN+ CV++++
Sbjct: 529 GPSTIRNVCSNVNCVVVVV 547

[Close]
BLAST of Bhi02G000123 vs. NCBI nr
Match: XP_023515716.1 (uncharacterized protein LOC111779796 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.6 bits (314), Expect = 7.9e-26
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 1   TTILNAMKNMVDPATKVMYNENADAGFVKSNGFSYAIVVLGEPPYIEMFGDGMNLSIPER 60
           TTILNA+KN VDPAT+V+YNEN DA +VKSN FSYAIVV+GEPPY EMFGD  NLSI E 
Sbjct: 470 TTILNAVKNTVDPATEVVYNENPDASYVKSNKFSYAIVVVGEPPYAEMFGDSSNLSISEP 529

Query: 61  SPSTIRNVCSNIKCVIIII 80
            PS I+NVCSN+KCV+I++
Sbjct: 530 GPSAIKNVCSNVKCVVIVV 548

The following BLAST results are available for this feature:
BLAST of Bhi02G000123 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi02G000123 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20950.17.6e-2359.49Glycosyl hydrolase family protein[more]
AT5G20940.16.5e-2256.96Glycosyl hydrolase family protein[more]
AT5G04885.15.7e-1846.84Glycosyl hydrolase family protein[more]
AT3G62710.12.3e-1141.98Glycosyl hydrolase family protein[more]
AT3G47000.11.6e-0940.00Glycosyl hydrolase family protein[more]
BLAST of Bhi02G000123 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BXL6|A0A1S3BXL6_CUCME2.3e-2673.42beta-glucosidase BoGH3B-like OS=Cucumis melo OX=3656 GN=LOC103494201 PE=4 SV=1[more]
tr|A0A0A0LV53|A0A0A0LV53_CUCSA3.4e-2570.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025780 PE=4 SV=1[more]
tr|A0A1U8BPC5|A0A1U8BPC5_NELNU9.9e-2572.15uncharacterized protein LOC104613042 OS=Nelumbo nucifera OX=4432 GN=LOC104613042... [more]
tr|A0A2C9V1F5|A0A2C9V1F5_MANES1.3e-2469.62Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G105100 PE=4 SV=... [more]
tr|A0A059ABH4|A0A059ABH4_EUCGR2.9e-2468.35Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00605 PE=4 SV... [more]
BLAST of Bhi02G000123 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988494.11.2e-2674.68uncharacterized protein LOC111485719 [Cucurbita maxima][more]
XP_008453517.13.5e-2673.42PREDICTED: beta-glucosidase BoGH3B-like [Cucumis melo] >XP_008453518.1 PREDICTED... [more]
XP_021692652.17.9e-2673.42uncharacterized protein LOC110673764 [Hevea brasiliensis] >XP_021692658.1 unchar... [more]
XP_022135118.17.9e-2672.15uncharacterized protein LOC111007174 [Momordica charantia] >XP_022135119.1 uncha... [more]
XP_023515716.17.9e-2673.42uncharacterized protein LOC111779796 [Cucurbita pepo subsp. pepo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR036881Glyco_hydro_3_C_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000123Bhi02M000123mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036881Glycoside hydrolase family 3 C-terminal domain superfamilyGENE3DG3DSA:3.40.50.1700coord: 1..80
e-value: 9.0E-16
score: 60.1
IPR036881Glycoside hydrolase family 3 C-terminal domain superfamilySUPERFAMILYSSF52279Beta-D-glucan exohydrolase, C-terminal domaincoord: 1..79
NoneNo IPR availablePANTHERPTHR30620PERIPLASMIC BETA-GLUCOSIDASE-RELATEDcoord: 1..79
NoneNo IPR availablePANTHERPTHR30620:SF58SUBFAMILY NOT NAMEDcoord: 1..79

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G000123Cucumber (Gy14) v1cgywgoB186
Bhi02G000123Cucumber (Gy14) v2cgybwgoB075
Bhi02G000123Cucurbita maxima (Rimu)cmawgoB0077
Bhi02G000123Cucurbita maxima (Rimu)cmawgoB0152
Bhi02G000123Cucurbita moschata (Rifu)cmowgoB0071
Bhi02G000123Cucurbita moschata (Rifu)cmowgoB0146
Bhi02G000123Cucurbita pepo (Zucchini)cpewgoB0467
Bhi02G000123Cucurbita pepo (Zucchini)cpewgoB0897
Bhi02G000123Wild cucumber (PI 183967)cpiwgoB079
Bhi02G000123Cucumber (Chinese Long) v3cucwgoB085
Bhi02G000123Cucumber (Chinese Long) v2cuwgoB077
Bhi02G000123Bottle gourd (USVL1VR-Ls)lsiwgoB519
Bhi02G000123Melon (DHL92) v3.6.1medwgoB304
Bhi02G000123Melon (DHL92) v3.5.1mewgoB306
Bhi02G000123Watermelon (Charleston Gray)wcgwgoB548
Bhi02G000123Watermelon (97103) v2wgowmbB656
Bhi02G000123Watermelon (97103) v1wgowmB685
Bhi02G000123Silver-seed gourdcarwgoB0710
Bhi02G000123Silver-seed gourdcarwgoB0924