Bhi01G002502 (gene) Wax gourd

Overview
NameBhi01G002502
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 80302244 .. 80302646 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCGACGAGAAGGGAGTCGTGAGATTCGGACCAAGAGANNNNNNTGTCGTTCGTCCGTCAGTCTCCATCACGTTTGGGTCTCTCCTGGTCATGGGTCTCTCCATGGTGGATCCTGGTTCTCGCACATCCCAAATGCGAACGGTGCAATCGCCAGAGGCGGAAGCAAAGACATTGTCGTGACGAGGGTTGTTATAAAGCTTGACAGGGCCATCGGCGATGGTGGCGACGAGAAGGGAGTCGTGAGATTCGGACCAAGAGATGTTGTAGATTCCATCGGCGGTGTCAAAGGCGATGTGCTCGGATATGGGACCGGCGGGATTGAGATTGAGGACGTGAAGGCGACCATTGCCAAGGATTCCAAAATTTTGAGTGGTGGCAACGGCGATGCGGGTTTGTAG

mRNA sequence

ATGGTGGCGACGAGAAGGGAGTCTCTCCATCACGTTTGGGTCTCTCCTGGTCATGGGTCTCTCCATGGTGGATCCTGGTTCTCGCACATCCCAAATGCGAACGGTGCAATCGCCAGAGGCGGAAGCAAAGACATTGTCGTGACGAGGGTTGTTATAAAGCTTGACAGGGCCATCGGCGATGGTGGCGACGAGAAGGGAGTCGTGAGATTCGGACCAAGAGATGTTGTAGATTCCATCGGCGGTGTCAAAGGCGATGTGCTCGGATATGGGACCGGCGGGATTGAGATTGAGGACGTGAAGGCGACCATTGCCAAGGATTCCAAAATTTTGAGTGGTGGCAACGGCGATGCGGGTTTGTAG

Coding sequence (CDS)

ATGGTGGCGACGAGAAGGGAGTCTCTCCATCACGTTTGGGTCTCTCCTGGTCATGGGTCTCTCCATGGTGGATCCTGGTTCTCGCACATCCCAAATGCGAACGGTGCAATCGCCAGAGGCGGAAGCAAAGACATTGTCGTGACGAGGGTTGTTATAAAGCTTGACAGGGCCATCGGCGATGGTGGCGACGAGAAGGGAGTCGTGAGATTCGGACCAAGAGATGTTGTAGATTCCATCGGCGGTGTCAAAGGCGATGTGCTCGGATATGGGACCGGCGGGATTGAGATTGAGGACGTGAAGGCGACCATTGCCAAGGATTCCAAAATTTTGAGTGGTGGCAACGGCGATGCGGGTTTGTAG

Protein sequence

MVATRRESLHHVWVSPGHGSLHGGSWFSHIPNANGAIARGGSKDIVVTRVVIKLDRAIGDGGDEKGVVRFGPRDVVDSIGGVKGDVLGYGTGGIEIEDVKATIAKDSKILSGGNGDAGL
Homology
[Close]
BLAST of Bhi01G002502 vs. TrEMBL
Match: tr|A0A2P5EP52|A0A2P5EP52_9ROSA (Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_169520 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-07
Identity = 49/171 (28.65%), Postives = 72/171 (42.11%), Query Frame = 0 

Query: 22  HGGSWFSHIPNANGAIARGGSKDIVVTRV------------------------------- 81
           HGG+  +H+P+A+GA+ RGG + I +TRV                               
Sbjct: 94  HGGTGLTHVPDADGAVPRGGGEHIPMTRVPDGAIHAVSVLLECPHAGXXXXXXXXXXXXX 153

Query: 82  -------------------------------------VIKLDRAIGDGGDEKGVVRFGPR 120
                                                V++LD AIG GG+++ VV  GP 
Sbjct: 154 XXXXXXXXXXXXXXXXXXXXXXXXXXANWVGGRGQGEVVELDGAIGYGGNDEVVVGLGPG 213

[Close]
BLAST of Bhi01G002502 vs. TrEMBL
Match: tr|A0A2P5DUM7|A0A2P5DUM7_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_030120 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.1e-07
Identity = 49/171 (28.65%), Postives = 77/171 (45.03%), Query Frame = 0 

Query: 22  HGGSWFSHIPNANGAIARGGSKDIVVTRV------------------------------- 81
           HG +  +H+P+A+GA+ RGG + I +TRV                               
Sbjct: 94  HGRAGLTHVPDADGAVPRGGGEHISMTRVPDGAVHAVSVLLECPXXXXXXXXXXXXXXXX 153

Query: 82  -------------------------------------VIKLDRAIGDGGDEKGVVRFGPR 120
                                                V++LD AIG GG+++ VV  GP 
Sbjct: 154 XXXXXXXXXXXXXXXXXXXXXXXXXXXNWVGGRGQGEVVELDGAIGYGGNDEVVVGLGPG 213

[Close]
BLAST of Bhi01G002502 vs. NCBI nr
Match: PON87316.1 (hypothetical protein TorRG33x02_169520, partial [Trema orientalis])

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-07
Identity = 49/171 (28.65%), Postives = 72/171 (42.11%), Query Frame = 0 

Query: 22  HGGSWFSHIPNANGAIARGGSKDIVVTRV------------------------------- 81
           HGG+  +H+P+A+GA+ RGG + I +TRV                               
Sbjct: 94  HGGTGLTHVPDADGAVPRGGGEHIPMTRVPDGAIHAVSVLLECPHAGXXXXXXXXXXXXX 153

Query: 82  -------------------------------------VIKLDRAIGDGGDEKGVVRFGPR 120
                                                V++LD AIG GG+++ VV  GP 
Sbjct: 154 XXXXXXXXXXXXXXXXXXXXXXXXXXANWVGGRGQGEVVELDGAIGYGGNDEVVVGLGPG 213

[Close]
BLAST of Bhi01G002502 vs. NCBI nr
Match: PON77003.1 (hypothetical protein PanWU01x14_030120 [Parasponia andersonii])

HSP 1 Score: 62.8 bits (151), Expect = 9.2e-07
Identity = 49/171 (28.65%), Postives = 77/171 (45.03%), Query Frame = 0 

Query: 22  HGGSWFSHIPNANGAIARGGSKDIVVTRV------------------------------- 81
           HG +  +H+P+A+GA+ RGG + I +TRV                               
Sbjct: 94  HGRAGLTHVPDADGAVPRGGGEHISMTRVPDGAVHAVSVLLECPXXXXXXXXXXXXXXXX 153

Query: 82  -------------------------------------VIKLDRAIGDGGDEKGVVRFGPR 120
                                                V++LD AIG GG+++ VV  GP 
Sbjct: 154 XXXXXXXXXXXXXXXXXXXXXXXXXXXNWVGGRGQGEVVELDGAIGYGGNDEVVVGLGPG 213

The following BLAST results are available for this feature:
BLAST of Bhi01G002502 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G002502 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G002502 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2P5EP52|A0A2P5EP52_9ROSA2.7e-0728.65Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_16... [more]
tr|A0A2P5DUM7|A0A2P5DUM7_PARAD6.1e-0728.65Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_030120 PE... [more]
BLAST of Bhi01G002502 vs. NCBI nr
Match NameE-valueIdentityDescription
PON87316.14.1e-0728.65hypothetical protein TorRG33x02_169520, partial [Trema orientalis][more]
PON77003.19.2e-0728.65hypothetical protein PanWU01x14_030120 [Parasponia andersonii][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002502Bhi01M002502mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G002502Cucumber (Gy14) v1cgywgoB554
Bhi01G002502Cucumber (Gy14) v2cgybwgoB352
Bhi01G002502Cucurbita maxima (Rimu)cmawgoB0437
Bhi01G002502Cucurbita maxima (Rimu)cmawgoB0851
Bhi01G002502Cucurbita moschata (Rifu)cmowgoB0848
Bhi01G002502Cucurbita moschata (Rifu)cmowgoB0433
Bhi01G002502Cucurbita pepo (Zucchini)cpewgoB0294
Bhi01G002502Cucurbita pepo (Zucchini)cpewgoB0515
Bhi01G002502Wild cucumber (PI 183967)cpiwgoB367
Bhi01G002502Cucumber (Chinese Long) v3cucwgoB370
Bhi01G002502Cucumber (Chinese Long) v2cuwgoB365
Bhi01G002502Bottle gourd (USVL1VR-Ls)lsiwgoB551
Bhi01G002502Melon (DHL92) v3.6.1medwgoB582
Bhi01G002502Melon (DHL92) v3.5.1mewgoB577
Bhi01G002502Watermelon (Charleston Gray)wcgwgoB572
Bhi01G002502Watermelon (97103) v2wgowmbB219
Bhi01G002502Watermelon (97103) v1wgowmB199
Bhi01G002502Silver-seed gourdcarwgoB0770