Bhi01G002213 (gene) Wax gourd

NameBhi01G002213
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 70302580 .. 70303179 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGATCTCTTATTTCAAATCTCGAAAAAGATTGGCGACGTATATGATGCATGGCTAAAAACTAGGAAGACAAAAGACGAAATTCGTCGAGTCCTTCACAGCGACAGGCCAAAACTTTTCTTTAAAAAATTCTCACTGCAAGAGTGGGTTACTTCGAAGGTAATATGACTACCTTACTAATTTATTAATTCATCAGGCACACAGTTGAAGTCTGTTGAGTTTTGGAATTTCATGTTGTAGGACATTAATATATTATTGATGTTCATGATGCGTAAGTTACAATCCAGACCGGACCTCTGTAAACACACGTTCACGATTGTTGACACCGCTTTTATAGTACGTTTTTATTCTTCATGGAATTGTATTACTGCATTGGTATCCCTAAATTATTTTTTTCGGCTCCAACTGGAATTCTTTCTTTCGCCCGAGGCTCTTGCAAAGGTAGCTGCATCGAGGGACATAGCGGGAATGTTGGAGTGGTGGGGCAGTAGAGATCAAGCATTTCTAGACCACGTTCTTGGGGAGGTTAAGGGATATGAACCTGCATGGCTTGAGGTAACGTATATGTACGACTCCATCAATGTTAGGAGACATTAG

mRNA sequence

ATGTATGATCTCTTATTTCAAATCTCGAAAAAGATTGGCGACGTATATGATGCATGGCTAAAAACTAGGAAGACAAAAGACGAAATTCGTCGAGTCCTTCACAGCGACAGGCCAAAACTTTTCTTTAAAAAATTCTCACTGCAAGAGTGGGTTACTTCGAAGGACATTAATATATTATTGATGTTCATGATGCGTAAGTTACAATCCAGACCGGACCTCTGTAAACACACGTTCACGATTGTTGACACCGCTTTTATAGTACGTTTTTATTCTTCATGGAATTGTATTACTGCATTGGTATCCCTAAATTATTTTTTTCGGCTCCAACTGGAATTCTTTCTTTCGCCCGAGGCTCTTGCAAAGGTAGCTGCATCGAGGGACATAGCGGGAATGTTGGAGTGGTGGGGCAGTAGAGATCAAGCATTTCTAGACCACGTTCTTGGGGAGGTTAAGGGATATGAACCTGCATGGCTTGAGGTAACGTATATGTACGACTCCATCAATGTTAGGAGACATTAG

Coding sequence (CDS)

ATGTATGATCTCTTATTTCAAATCTCGAAAAAGATTGGCGACGTATATGATGCATGGCTAAAAACTAGGAAGACAAAAGACGAAATTCGTCGAGTCCTTCACAGCGACAGGCCAAAACTTTTCTTTAAAAAATTCTCACTGCAAGAGTGGGTTACTTCGAAGGACATTAATATATTATTGATGTTCATGATGCGTAAGTTACAATCCAGACCGGACCTCTGTAAACACACGTTCACGATTGTTGACACCGCTTTTATAGTACGTTTTTATTCTTCATGGAATTGTATTACTGCATTGGTATCCCTAAATTATTTTTTTCGGCTCCAACTGGAATTCTTTCTTTCGCCCGAGGCTCTTGCAAAGGTAGCTGCATCGAGGGACATAGCGGGAATGTTGGAGTGGTGGGGCAGTAGAGATCAAGCATTTCTAGACCACGTTCTTGGGGAGGTTAAGGGATATGAACCTGCATGGCTTGAGGTAACGTATATGTACGACTCCATCAATGTTAGGAGACATTAG

Protein sequence

MYDLLFQISKKIGDVYDAWLKTRKTKDEIRRVLHSDRPKLFFKKFSLQEWVTSKDINILLMFMMRKLQSRPDLCKHTFTIVDTAFIVRFYSSWNCITALVSLNYFFRLQLEFFLSPEALAKVAASRDIAGMLEWWGSRDQAFLDHVLGEVKGYEPAWLEVTYMYDSINVRRH
BLAST of Bhi01G002213 vs. TrEMBL
Match: tr|A0A1S4E5W8|A0A1S4E5W8_CUCME (uncharacterized protein LOC107992262 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107992262 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-07
Identity = 44/173 (25.43%), Postives = 82/173 (47.40%), Query Frame = 0

Query: 2   YDLLFQISKKIGDVYDAWLKTRKTKDEIRRVLHSDRPKLFFKK-FSLQEWVTSKDINILL 61
           YD + +I     D   AW+   +T DE+R   H  + K+FF+  F  + W+  + +++L 
Sbjct: 15  YDPMHKILDVDLDRLRAWITDERTNDEVRETFHGKKSKIFFRDLFICRRWLVDEHLDVLF 74

Query: 62  MFMMRKLQSRPDLCKHTFTIVDTAFIVRFYSSWNCITALVSLNYFFRLQL---EFFLSPE 121
           +F+  K+++        FT V+T FIV   +   C+   + L + FR  +    F L   
Sbjct: 75  LFIRFKIKAARIPSAQNFTTVETIFIVCNRNITLCM--YLRLIFVFRFDICVSIFSLQRL 134

Query: 122 ALAKVAASRDIAGMLEWWGSRDQ-AFLDHVLGEVKGYEPAWLEVTYMYDSINV 170
            +AK    ++       + S+++   +D+V G  + ++  W  V Y+Y   NV
Sbjct: 135 LIAKWPRYKECIKDSRSFDSKEEYRLVDYVAGSKEDFQDPWTSVDYVYSPFNV 185

BLAST of Bhi01G002213 vs. NCBI nr
Match: XP_016903636.1 (PREDICTED: uncharacterized protein LOC107992262 isoform X1 [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-07
Identity = 44/173 (25.43%), Postives = 82/173 (47.40%), Query Frame = 0

Query: 2   YDLLFQISKKIGDVYDAWLKTRKTKDEIRRVLHSDRPKLFFKK-FSLQEWVTSKDINILL 61
           YD + +I     D   AW+   +T DE+R   H  + K+FF+  F  + W+  + +++L 
Sbjct: 15  YDPMHKILDVDLDRLRAWITDERTNDEVRETFHGKKSKIFFRDLFICRRWLVDEHLDVLF 74

Query: 62  MFMMRKLQSRPDLCKHTFTIVDTAFIVRFYSSWNCITALVSLNYFFRLQL---EFFLSPE 121
           +F+  K+++        FT V+T FIV   +   C+   + L + FR  +    F L   
Sbjct: 75  LFIRFKIKAARIPSAQNFTTVETIFIVCNRNITLCM--YLRLIFVFRFDICVSIFSLQRL 134

Query: 122 ALAKVAASRDIAGMLEWWGSRDQ-AFLDHVLGEVKGYEPAWLEVTYMYDSINV 170
            +AK    ++       + S+++   +D+V G  + ++  W  V Y+Y   NV
Sbjct: 135 LIAKWPRYKECIKDSRSFDSKEEYRLVDYVAGSKEDFQDPWTSVDYVYSPFNV 185

BLAST of Bhi01G002213 vs. NCBI nr
Match: XP_022148308.1 (uncharacterized protein LOC111016993 [Momordica charantia])

HSP 1 Score: 54.7 bits (130), Expect = 3.6e-04
Identity = 42/145 (28.97%), Postives = 64/145 (44.14%), Query Frame = 0

Query: 30  RRVLHSDRPKLFFKKFSLQ-EWVTSKDINILLMFMMRKLQSRPDLCKHTFTIVDTAFIVR 89
           R+ ++S + K +F+       W T++ ++ L M + +KL+ RPDLC   FT  D      
Sbjct: 111 RKTVYSIKNKAWFRNLLRPGNWCTAEVVDELFMLLRKKLEQRPDLCSRKFTTGD------ 170

Query: 90  FYSSWNCITALVSLNYFFRLQ--LEFFLSPEAL-AKVAASRDIAGMLEWWGSRDQAFLDH 149
                     LV  NYF R         S  +L +KVAA  D       W  RD++ + +
Sbjct: 171 ----------LVLANYFRRKDDJYACMQSDSSLPSKVAAEYD-------WDGRDESIMGY 230

Query: 150 VLGEVKGYEPAWLEVTYMYDSINVR 171
             G    Y   W+EV  +Y   N+R
Sbjct: 231 TDGTHTDYPLRWMEVDAIYIPFNIR 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4E5W8|A0A1S4E5W8_CUCME1.8e-0725.43uncharacterized protein LOC107992262 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
XP_016903636.12.7e-0725.43PREDICTED: uncharacterized protein LOC107992262 isoform X1 [Cucumis melo][more]
XP_022148308.13.6e-0428.97uncharacterized protein LOC111016993 [Momordica charantia][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M002213Bhi01M002213mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G002213Wax gourdwgowgoB061
Bhi01G002213Cucumber (Gy14) v1cgywgoB292
Bhi01G002213Cucumber (Gy14) v1cgywgoB716
Bhi01G002213Cucumber (Gy14) v2cgybwgoB276
Bhi01G002213Cucumber (Gy14) v2cgybwgoB624
Bhi01G002213Cucurbita maxima (Rimu)cmawgoB0330
Bhi01G002213Cucurbita maxima (Rimu)cmawgoB0476
Bhi01G002213Cucurbita maxima (Rimu)cmawgoB0564
Bhi01G002213Cucurbita maxima (Rimu)cmawgoB1110
Bhi01G002213Cucurbita moschata (Rifu)cmowgoB0319
Bhi01G002213Cucurbita moschata (Rifu)cmowgoB0475
Bhi01G002213Cucurbita moschata (Rifu)cmowgoB0561
Bhi01G002213Cucurbita moschata (Rifu)cmowgoB1109
Bhi01G002213Cucurbita pepo (Zucchini)cpewgoB0191
Bhi01G002213Cucurbita pepo (Zucchini)cpewgoB0399
Bhi01G002213Cucurbita pepo (Zucchini)cpewgoB0675
Bhi01G002213Cucurbita pepo (Zucchini)cpewgoB0785
Bhi01G002213Wild cucumber (PI 183967)cpiwgoB288
Bhi01G002213Wild cucumber (PI 183967)cpiwgoB664
Bhi01G002213Cucumber (Chinese Long) v3cucwgoB292
Bhi01G002213Cucumber (Chinese Long) v3cucwgoB679
Bhi01G002213Cucumber (Chinese Long) v2cuwgoB288
Bhi01G002213Cucumber (Chinese Long) v2cuwgoB655
Bhi01G002213Bottle gourd (USVL1VR-Ls)lsiwgoB216
Bhi01G002213Bottle gourd (USVL1VR-Ls)lsiwgoB544
Bhi01G002213Melon (DHL92) v3.6.1medwgoB206
Bhi01G002213Melon (DHL92) v3.6.1medwgoB399
Bhi01G002213Melon (DHL92) v3.5.1mewgoB205
Bhi01G002213Melon (DHL92) v3.5.1mewgoB398
Bhi01G002213Watermelon (Charleston Gray)wcgwgoB028
Bhi01G002213Watermelon (Charleston Gray)wcgwgoB561
Bhi01G002213Watermelon (97103) v2wgowmbB208
Bhi01G002213Watermelon (97103) v2wgowmbB232
Bhi01G002213Watermelon (97103) v1wgowmB169
Bhi01G002213Watermelon (97103) v1wgowmB189
Bhi01G002213Silver-seed gourdcarwgoB0142
Bhi01G002213Silver-seed gourdcarwgoB0245
Bhi01G002213Silver-seed gourdcarwgoB0715
Bhi01G002213Silver-seed gourdcarwgoB0900