Bhi01G001966 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G001966
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Alpha/beta-Hydrolases superfamily protein
Location	chr1 : 62515810 .. 62516016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCGTTTGATGTTCGGAAGGTGAATGTCACTAGAATTAGCTACAATGGCTTTGTATTGAACAATATAGTCGTTAAATTTTCTGAGCAATTGGAGAAATTGGTGCTTTATTGTGTTGGAGTTTGCTTAGAAGATAAAGATATGACAGACATAATGTTCATCGTGAAAATTGTTTATGGGGTCGTTAGCATTTTACTGCCTTAA

mRNA sequence

ATGGTTTCGTTTGATGTTCGGAAGGTGAATGTCACTAGAATTAGCTACAATGGCTTTGTATTGAACAATATAGTCGTTAAATTTTCTGAGCAATTGGAGAAATTGGTGCTTTATTGTGTTGGAGTTTGCTTAGAAGATAAAGATATGACAGACATAATGTTCATCGTGAAAATTGTTTATGGGGTCGTTAGCATTTTACTGCCTTAA

Coding sequence (CDS)

ATGGTTTCGTTTGATGTTCGGAAGGTGAATGTCACTAGAATTAGCTACAATGGCTTTGTATTGAACAATATAGTCGTTAAATTTTCTGAGCAATTGGAGAAATTGGTGCTTTATTGTGTTGGAGTTTGCTTAGAAGATAAAGATATGACAGACATAATGTTCATCGTGAAAATTGTTTATGGGGTCGTTAGCATTTTACTGCCTTAA

Protein sequence

MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVYGVVSILLP

Homology

[Close]

BLAST of Bhi01G001966 vs. TAIR10
Match: AT5G09430.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-09
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M +  V+++N+  ISY GFV  ++  +F E +EKLVL C GVCLE+KDM D +F V  + 
Sbjct: 121 MEAHGVQRMNIVGISYGGFVGYSLAAQFPENVEKLVLCCAGVCLEEKDMEDGLFKVPNLE 180

Query: 61  GVVSILLP 69
               IL+P
Sbjct: 181 EATGILIP 188

[Close]

BLAST of Bhi01G001966 vs. TAIR10
Match: AT4G39955.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 9.9e-08
Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M ++ VR + V  +SY GFV  ++  +F E+++++VL C GV LE+KD  D MF VK   
Sbjct: 110 MDAYGVRTMTVAGLSYGGFVAYSLAAQFKERVDRVVLICAGVALEEKDSEDGMFKVKSPE 169

Query: 61  GVVSILLP 69
              ++L P
Sbjct: 170 EAAAVLFP 177

[Close]

BLAST of Bhi01G001966 vs. TAIR10
Match: AT1G78210.1 (alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 41.2 bits (95), Expect = 3.0e-04
Identity = 22/63 (34.92%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 6   VRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVYGVVSI 65
           V+K ++  +SY GFV   +   +++ +EK+V+ C  VC+E+KDM   +F V  +     I
Sbjct: 117 VKKFSLVGLSYGGFVGYRMASMYADAVEKVVICCAAVCVEEKDMKAGVFKVSDLDEASKI 176

Query: 66  LLP 69
           L+P
Sbjct: 177 LVP 179

[Close]

BLAST of Bhi01G001966 vs. TrEMBL
Match: tr|A0A1S3BXZ7|A0A1S3BXZ7_CUCME (2-hydroxy-6-oxo-2,4-heptadienoate hydrolase-like OS=Cucumis melo OX=3656 GN=LOC103494432 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-11
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M SF V+KVNV  ISY GFV  ++ V+F E+LEKLVL C GVCLE+KDM D MF+VK V 
Sbjct: 110 MDSFGVQKVNVVGISYGGFVSYSMAVQFPERLEKLVLCCAGVCLEEKDMADGMFVVKNVD 169

Query: 61  GVVSILLP 69
              SILLP
Sbjct: 170 EAASILLP 177

[Close]

BLAST of Bhi01G001966 vs. TrEMBL
Match: tr|A0A0A0KWE2|A0A0A0KWE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026270 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-11
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M SF V+KVNV  ISY GFV  ++ V+F E+LEKLVL C GVCLE+KDM D MF+VK V 
Sbjct: 110 MDSFGVQKVNVVGISYGGFVSYSMAVQFPERLEKLVLCCAGVCLEEKDMADGMFVVKNVD 169

Query: 61  GVVSILLP 69
              SILLP
Sbjct: 170 EAASILLP 177

[Close]

BLAST of Bhi01G001966 vs. TrEMBL
Match: tr|A0A068TYX9|A0A068TYX9_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036546001 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.5e-10
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M +  V+K++V  ISY GFV  N+ V+F E +EKLVL C GVCLE+KDM + MF+VK V 
Sbjct: 110 MEALGVKKMSVVGISYGGFVGYNLAVQFPEAVEKLVLGCAGVCLEEKDMEEGMFLVKSVE 169

Query: 61  GVVSILLP 69
             VSILLP
Sbjct: 170 DAVSILLP 177

[Close]

BLAST of Bhi01G001966 vs. TrEMBL
Match: tr|A0A059B8V5|A0A059B8V5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04767 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-09
Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M +  V+++NV  +SY GFV  ++ V+F E+++KLVL C GVCLEDKDM + MF V+ V 
Sbjct: 110 MEAIGVKRMNVVGMSYGGFVAYSVAVQFGERVDKLVLICAGVCLEDKDMEEGMFRVRSVD 169

Query: 61  GVVSILLP 69
             VS+LLP
Sbjct: 170 EAVSVLLP 177

[Close]

BLAST of Bhi01G001966 vs. TrEMBL
Match: tr|A0A059AKN4|A0A059AKN4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00502 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-08
Identity = 37/63 (58.73%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 6   VRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVYGVVSI 65
           VRK NV  ISY GFV  ++  +F E +EKLVL C GVC+EDKDM D MF VK V   VS 
Sbjct: 115 VRKTNVVGISYGGFVSYSLAAQFPEMVEKLVLCCAGVCMEDKDMEDGMFPVKSVDEAVSF 174

Query: 66  LLP 69
           L P
Sbjct: 175 LFP 177

[Close]

BLAST of Bhi01G001966 vs. NCBI nr
Match: XP_004146882.1 (PREDICTED: monoacylglycerol lipase ABHD6 [Cucumis sativus] >KGN53199.1 hypothetical protein Csa_4G026270 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M SF V+KVNV  ISY GFV  ++ V+F E+LEKLVL C GVCLE+KDM D MF+VK V 
Sbjct: 110 MDSFGVQKVNVVGISYGGFVSYSMAVQFPERLEKLVLCCAGVCLEEKDMADGMFVVKNVD 169

Query: 61  GVVSILLP 69
              SILLP
Sbjct: 170 EAASILLP 177

[Close]

BLAST of Bhi01G001966 vs. NCBI nr
Match: XP_008453821.1 (PREDICTED: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase-like [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M SF V+KVNV  ISY GFV  ++ V+F E+LEKLVL C GVCLE+KDM D MF+VK V 
Sbjct: 110 MDSFGVQKVNVVGISYGGFVSYSMAVQFPERLEKLVLCCAGVCLEEKDMADGMFVVKNVD 169

Query: 61  GVVSILLP 69
              SILLP
Sbjct: 170 EAASILLP 177

[Close]

BLAST of Bhi01G001966 vs. NCBI nr
Match: XP_022929431.1 (uncharacterized protein LOC111436005 isoform X1 [Cucurbita moschata])

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-10
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M S DV+ VNV  ISY GFV  ++  +F E+LEKLVL C GVCLE+KDM D MF+VK + 
Sbjct: 110 MDSLDVQTVNVVGISYGGFVAYSMAAQFPERLEKLVLCCTGVCLEEKDMADGMFVVKNID 169

Query: 61  GVVSILLP 69
             V ILLP
Sbjct: 170 EAVDILLP 177

[Close]

BLAST of Bhi01G001966 vs. NCBI nr
Match: XP_022929432.1 (uncharacterized protein LOC111436005 isoform X2 [Cucurbita moschata])

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-10
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M S DV+ VNV  ISY GFV  ++  +F E+LEKLVL C GVCLE+KDM D MF+VK + 
Sbjct: 110 MDSLDVQTVNVVGISYGGFVAYSMAAQFPERLEKLVLCCTGVCLEEKDMADGMFVVKNID 169

Query: 61  GVVSILLP 69
             V ILLP
Sbjct: 170 EAVDILLP 177

[Close]

BLAST of Bhi01G001966 vs. NCBI nr
Match: XP_023553073.1 (uncharacterized protein LOC111810579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-10
Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   MVSFDVRKVNVTRISYNGFVLNNIVVKFSEQLEKLVLYCVGVCLEDKDMTDIMFIVKIVY 60
           M S DV+ VNV  ISY GFV  +I  +F E+LEKLVL C GVCLE+KDM D MF+VK + 
Sbjct: 110 MDSLDVQTVNVVGISYGGFVAYSIAAQFPERLEKLVLCCTGVCLEEKDMADGMFVVKNID 169

Query: 61  GVVSILLP 69
              +ILLP
Sbjct: 170 EAANILLP 177

The following BLAST results are available for this feature:

BLAST of Bhi01G001966 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09430.1	1.4e-09	45.59	alpha/beta-Hydrolases superfamily protein	[more]
AT4G39955.1	9.9e-08	39.71	alpha/beta-Hydrolases superfamily protein	[more]
AT1G78210.1	3.0e-04	34.92	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Bhi01G001966 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G001966 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXZ7\|A0A1S3BXZ7_CUCME	1.0e-11	63.24	2-hydroxy-6-oxo-2,4-heptadienoate hydrolase-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0KWE2\|A0A0A0KWE2_CUCSA	1.0e-11	63.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026270 PE=4 SV=1	[more]
tr\|A0A068TYX9\|A0A068TYX9_COFCA	7.5e-10	57.35	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00036546001 PE=4 ...	[more]
tr\|A0A059B8V5\|A0A059B8V5_EUCGR	4.9e-09	51.47	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H04767 PE=4 SV...	[more]
tr\|A0A059AKN4\|A0A059AKN4_EUCGR	1.1e-08	58.73	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I00502 PE=4 SV...	[more]

BLAST of Bhi01G001966 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146882.1	1.6e-11	63.24	PREDICTED: monoacylglycerol lipase ABHD6 [Cucumis sativus] >KGN53199.1 hypotheti...	[more]
XP_008453821.1	1.6e-11	63.24	PREDICTED: 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase-like [Cucumis melo]	[more]
XP_022929431.1	1.8e-10	58.82	uncharacterized protein LOC111436005 isoform X1 [Cucurbita moschata]	[more]
XP_022929432.1	1.8e-10	58.82	uncharacterized protein LOC111436005 isoform X2 [Cucurbita moschata]	[more]
XP_023553073.1	1.8e-10	58.82	uncharacterized protein LOC111810579 [Cucurbita pepo subsp. pepo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001966	Bhi01M001966	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43139	FAMILY NOT NAMED	coord: 4..68
None	No IPR available	PANTHER	PTHR43139:SF10	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 4..68

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G001966	Cucumber (Gy14) v1	cgywgoB126
Bhi01G001966	Cucumber (Gy14) v1	cgywgoB244
Bhi01G001966	Cucumber (Gy14) v2	cgybwgoB361
Bhi01G001966	Cucumber (Gy14) v2	cgybwgoB461
Bhi01G001966	Cucurbita maxima (Rimu)	cmawgoB0440
Bhi01G001966	Cucurbita maxima (Rimu)	cmawgoB0854
Bhi01G001966	Cucurbita moschata (Rifu)	cmowgoB0438
Bhi01G001966	Cucurbita moschata (Rifu)	cmowgoB0851
Bhi01G001966	Cucurbita pepo (Zucchini)	cpewgoB0299
Bhi01G001966	Cucurbita pepo (Zucchini)	cpewgoB0519
Bhi01G001966	Wild cucumber (PI 183967)	cpiwgoB378
Bhi01G001966	Wild cucumber (PI 183967)	cpiwgoB488
Bhi01G001966	Cucumber (Chinese Long) v3	cucwgoB381
Bhi01G001966	Cucumber (Chinese Long) v3	cucwgoB497
Bhi01G001966	Cucumber (Chinese Long) v2	cuwgoB376
Bhi01G001966	Cucumber (Chinese Long) v2	cuwgoB485
Bhi01G001966	Bottle gourd (USVL1VR-Ls)	lsiwgoB555
Bhi01G001966	Melon (DHL92) v3.6.1	medwgoB038
Bhi01G001966	Melon (DHL92) v3.6.1	medwgoB573
Bhi01G001966	Melon (DHL92) v3.5.1	mewgoB568
Bhi01G001966	Watermelon (Charleston Gray)	wcgwgoB575
Bhi01G001966	Watermelon (97103) v2	wgowmbB171
Bhi01G001966	Watermelon (97103) v2	wgowmbB222
Bhi01G001966	Watermelon (97103) v1	wgowmB176
Bhi01G001966	Silver-seed gourd	carwgoB0460
Bhi01G001966	Silver-seed gourd	carwgoB0837
Bhi01G001966	Silver-seed gourd	carwgoB1020