Bhi01G001478 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G001478
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr1 : 42773291 .. 42774688 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGAGGCCCCAATTCTTCCTCCTTCCCGATCATCTTTTCCTTTCACGTCGTGGCCGATACCAACATCAAAACCTAGCCACGATGATGGCCACCACGACATTTATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTTATCCCGGCTGGTTGTGATGCTTTTACAGCTTCCAAACCAGTTTTCAACCTAACTTCCGGTGAGTTTGAAGTAATTCTTTGGGAAGATAGGAAGAGTTTATAATTATTTGAAATATACGTCTTTTAAAAAGAAAAAAATTGGTCTGATTATTTATACTTGGGATATAGAGGGATAATTTAAATAGAATTTGATATTTGTTATAACCCATGAAATAGAATTTTGAAATCCCAGTTGATTCCCAGTTGATATCAACGGTTTTTATATAGAATTTTAAGATAAGTAGCTAATGTAACATTTTCATTTATCAGCAGTGAAAATATCATTTTGGTCTTGTAATTTATTTGAAGTTTGTTGAATTTTAGTCGTTGTATTTTAGAAATGGTCCAATGTATTTTCAAGAAATCTTAAATTTAGAACATACTACTGGTTGATTTTTTTAAAGAAAATTTTTTATTTATTAACATTTTCATTCTAAATTTTGAAAATATATTCACATATTATATATTCTTGTATAAAAAAATATTTTTTTTATTTAGCCAATTTCCATTCAGATTAATTTTGAAAAAATAAATTTAAGATTATTAAAAGTATCGCGAGTAAAATTGAATAAACATCAAAGTACATAAACTAAAAGGGTATTTTTATCGAAATTAATACAATATTAATTAATAAATTAGGATTGATATGTTTCATTAAAATTATTTAGGGTGTTCAAGATCACAAACTCTGAAACCATTTTGTTAATTTTTTCCCTCCCTAATTTGGCAATTATTATATAGTTATATGATCAGACATCCTTTTGAAAATTCTAAAATTAATTAAAAAAGATGTTTAGTACATTTTATCAAAAATCATCTTCAAACTCACTAACAAATGTTGCATGCCCTAGACCCTGGGAAAGACCTCATTAGAGATATCGATACGGAGTTTCTAATGGAATCGCACGTGAGTCGAATTCTAGCCGAGCTGAGATTTGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGGCCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCGCCGCCGGAAAACTGTGACCCCTTCAATCGCGTCAATCCCTGTTAATTACAATGAAAAGAAAGAATAAGGACATCCAACAACTTCATTGTGATTTAGGGTTTACTTTACATTATCATTTAGGAATTAATGTAATCAACACATATGTTAGTAGTATGTAATATCGGTTTCATATATGTTGTTT

mRNA sequence

CAAAGAGGCCCCAATTCTTCCTCCTTCCCGATCATCTTTTCCTTTCACGTCGTGGCCGATACCAACATCAAAACCTAGCCACGATGATGGCCACCACGACATTTATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTTATCCCGGCTGGTTGTGATGCTTTTACAGCTTCCAAACCAGTTTTCAACCTAACTTCCGACCCTGGGAAAGACCTCATTAGAGATATCGATACGGAGTTTCTAATGGAATCGCACGTGAGTCGAATTCTAGCCGAGCTGAGATTTGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGGCCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCGCCGCCGGAAAACTGTGACCCCTTCAATCGCGTCAATCCCTGTTAATTACAATGAAAAGAAAGAATAAGGACATCCAACAACTTCATTGTGATTTAGGGTTTACTTTACATTATCATTTAGGAATTAATGTAATCAACACATATGTTAGTAGTATGTAATATCGGTTTCATATATGTTGTTT

Coding sequence (CDS)

ATGATGGCCACCACGACATTTATGATACCCGCCACCATAGCCGTCGTGATTTTGCTGCTTATCCCGGCTGGTTGTGATGCTTTTACAGCTTCCAAACCAGTTTTCAACCTAACTTCCGACCCTGGGAAAGACCTCATTAGAGATATCGATACGGAGTTTCTAATGGAATCGCACGTGAGTCGAATTCTAGCCGAGCTGAGATTTGAAACTATGAGGACACCGAATGCCAACTCGGCTTCAGTGGTCAATTGCGAACGGCCGCCACGCTACGACAGTTGCCTCGGTGAAGCAAGGGATAATCCGCCGCCGGAAAACTGTGACCCCTTCAATCGCGTCAATCCCTGTTAA

Protein sequence

MMATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLIRDIDTEFLMESHVSRILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC

Homology

[Close]

BLAST of Bhi01G001478 vs. TrEMBL
Match: tr|A0A0A0L9X5|A0A0A0L9X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.1e-45
Identity = 93/114 (81.58%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLIRDIDTEFLMESHVSR 61
           MA  T  I  T+A+V LLL+  GCDAF ASKPVFNL+SD GK LI DIDT+FLMESHVSR
Sbjct: 1   MAAATLSIRTTLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGDIDTDFLMESHVSR 60

Query: 62  ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPP ENCDP+NR NPC
Sbjct: 61  ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]

BLAST of Bhi01G001478 vs. TrEMBL
Match: tr|A0A0A0LCJ4|A0A0A0LCJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20
Identity = 59/119 (49.58%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLL-IPAGCDAFTASKPVFNLTSDPGKDLI---RDIDTEFLMES 61
           M  +  MIPA +  +ILLL IP+ CDA T  +P+ +  S  G  L+    D++ EFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 62  HVSRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           H+SRILA  + ++T  T NAN AS   C+RPPRYDSCLG+ R+     NC P+NR NPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNXXXXPNCSPYNRANPC 119

[Close]

BLAST of Bhi01G001478 vs. TrEMBL
Match: tr|A0A0A0L711|A0A0A0L711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-19
Identity = 58/120 (48.33%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 1   MMATTTFMIPATIAVVILLLIPAGC-DAFTASKPVFNLTSDP-GKDLI--RDIDTEFLME 60
           M      MIPA +A+++++LIP  C  A T+ KP+ N TS    K ++   DI + F+ME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHVSRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           SH+SR+LA+ + FET  T NA   S   C+RPPRYDSCLG  R+ PPP+NC  FNR +PC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]

BLAST of Bhi01G001478 vs. TrEMBL
Match: tr|A0A0A0KVZ2|A0A0A0KVZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-12
Identity = 54/118 (45.76%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 5   TTFMIPATIAVVILLLI--PAGCDAFTASKPVFNLTSDPGKDLIRD--IDTEFLMESHVS 64
           TTF IP T+A++IL L+  P  C+  T ++            L+ D  +D+EFLME+  S
Sbjct: 3   TTFSIP-TMAILILTLLFNPTRCNT-TVNETTSEWCYGSENCLVGDESLDSEFLMETETS 62

Query: 65  RILAELRFETMRTP---NANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           R+L  L F+ ++TP   + N  SV  C RPPRYDSC GE R  P PENCD  NR NPC
Sbjct: 63  RML--LDFQNLQTPGTIDPNRQSVAECGRPPRYDSCTGEERQIPNPENCDVRNRANPC 116

[Close]

BLAST of Bhi01G001478 vs. TrEMBL
Match: tr|A0A0A0KW62|A0A0A0KW62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-08
Identity = 47/119 (39.50%), Postives = 65/119 (54.62%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDA-FTASKPVFNLTSDPGKDLIRDID--TEFLMESH 61
           MA T  M      + ILLL P   +A    ++  +  ++     L+ D++  +EFLM + 
Sbjct: 9   MAATLTMPSMAFLITILLLNPIISNAGMNDTESKWCDSTGLENCLVGDLNSHSEFLMLTE 68

Query: 62  VSRILAE--LRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
            S +L +  L F+T +  +AN  SV +C RPPRYDSCLG  R  P PE C   NRVNPC
Sbjct: 69  SSGMLVDQFLTFQTPKANDANKESVPDCSRPPRYDSCLGSKRSIPNPEPCSTLNRVNPC 127

[Close]

BLAST of Bhi01G001478 vs. NCBI nr
Match: KGN57779.1 (hypothetical protein Csa_3G298070 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 93/114 (81.58%), Postives = 99/114 (86.84%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLIRDIDTEFLMESHVSR 61
           MA  T  I  T+A+V LLL+  GCDAF ASKPVFNL+SD GK LI DIDT+FLMESHVSR
Sbjct: 1   MAAATLSIRTTLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIGDIDTDFLMESHVSR 60

Query: 62  ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPP ENCDP+NR NPC
Sbjct: 61  ILAELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

[Close]

BLAST of Bhi01G001478 vs. NCBI nr
Match: XP_022998176.1 (uncharacterized protein LOC111492901 [Cucurbita maxima])

HSP 1 Score: 166.0 bits (419), Expect = 7.5e-38
Identity = 85/118 (72.03%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLI-RDIDTEFLMESHVS 61
           MA T  M PATIAVVILLL+   CDAF  +KP+FN T  PGK +I  DIDTEFLMESH+S
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 62  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           R+LA   ELRFETMR+PN N ASVV+CERPPRYDSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

[Close]

BLAST of Bhi01G001478 vs. NCBI nr
Match: XP_022948337.1 (uncharacterized protein LOC111452043 [Cucurbita moschata])

HSP 1 Score: 164.5 bits (415), Expect = 2.2e-37
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLI-RDIDTEFLMESHVS 61
           MA T  M P TIAVVILLL+  GCDAF  +KP+FN T  PGK +I  DIDTEFLMESH+S
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 62  RILA---ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           R+LA   ELRFETMR+PN N ASVV+CERPPR+DSCLGE ++NPP ENCDPFNR NPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

[Close]

BLAST of Bhi01G001478 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-26
Identity = 71/117 (60.68%), Postives = 84/117 (71.79%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLI--RDIDTEFLMESHV 61
           MA    MIPA +A++ILLL P   DA T  KP+ N TS  GK LI  +DID+EFLMESH+
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 62  SRILAELR-FETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           SRILA  + F+T +T +AN AS   CERPPRYDSCLG+  +NPPPENC  FNR NPC
Sbjct: 61  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of Bhi01G001478 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.5 bits (319), Expect = 3.0e-26
Identity = 71/117 (60.68%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 2   MATTTFMIPATIAVVILLLIPAGCDAFTASKPVFNLTSDPGKDLI--RDIDTEFLMESHV 61
           MAT   MIPA +A++ILLL P   DA T+ KP+ N TS  GK LI  +DID+EFLMESH+
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDALTSFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 62  SRILA-ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPPENCDPFNRVNPC 116
           SRILA    F+T  T +AN AS   C RPPRYDSCLG+  +NPPPENC  FNR NPC
Sbjct: 61  SRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:

BLAST of Bhi01G001478 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G001478 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G001478 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9X5\|A0A0A0L9X5_CUCSA	7.1e-45	81.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1	[more]
tr\|A0A0A0LCJ4\|A0A0A0LCJ4_CUCSA	1.6e-20	49.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1	[more]
tr\|A0A0A0L711\|A0A0A0L711_CUCSA	5.2e-19	48.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1	[more]
tr\|A0A0A0KVZ2\|A0A0A0KVZ2_CUCSA	1.6e-12	45.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G131140 PE=4 SV=1	[more]
tr\|A0A0A0KW62\|A0A0A0KW62_CUCSA	3.1e-08	39.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G130630 PE=4 SV=1	[more]

BLAST of Bhi01G001478 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57779.1	1.1e-44	81.58	hypothetical protein Csa_3G298070 [Cucumis sativus]	[more]
XP_022998176.1	7.5e-38	72.03	uncharacterized protein LOC111492901 [Cucurbita maxima]	[more]
XP_022948337.1	2.2e-37	71.19	uncharacterized protein LOC111452043 [Cucurbita moschata]	[more]
XP_022998105.1	1.0e-26	60.68	uncharacterized protein LOC111492854 [Cucurbita maxima]	[more]
XP_023523220.1	3.0e-26	60.68	uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001478	Bhi01M001478	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..115

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G001478	Cucumber (Gy14) v1	cgywgoB005
Bhi01G001478	Cucumber (Gy14) v2	cgybwgoB259
Bhi01G001478	Cucumber (Gy14) v2	cgybwgoB290
Bhi01G001478	Cucurbita maxima (Rimu)	cmawgoB0319
Bhi01G001478	Cucurbita maxima (Rimu)	cmawgoB0562
Bhi01G001478	Cucurbita moschata (Rifu)	cmowgoB0307
Bhi01G001478	Cucurbita moschata (Rifu)	cmowgoB0559
Bhi01G001478	Cucurbita pepo (Zucchini)	cpewgoB0673
Bhi01G001478	Cucurbita pepo (Zucchini)	cpewgoB0773
Bhi01G001478	Wild cucumber (PI 183967)	cpiwgoB271
Bhi01G001478	Wild cucumber (PI 183967)	cpiwgoB303
Bhi01G001478	Cucumber (Chinese Long) v3	cucwgoB274
Bhi01G001478	Cucumber (Chinese Long) v3	cucwgoB305
Bhi01G001478	Cucumber (Chinese Long) v2	cuwgoB271
Bhi01G001478	Bottle gourd (USVL1VR-Ls)	lsiwgoB447
Bhi01G001478	Melon (DHL92) v3.6.1	medwgoB540
Bhi01G001478	Melon (DHL92) v3.6.1	medwgoB546
Bhi01G001478	Melon (DHL92) v3.5.1	mewgoB539
Bhi01G001478	Melon (DHL92) v3.5.1	mewgoB542
Bhi01G001478	Watermelon (Charleston Gray)	wcgwgoB441
Bhi01G001478	Watermelon (97103) v2	wgowmbB194
Bhi01G001478	Watermelon (97103) v1	wgowmB215
Bhi01G001478	Silver-seed gourd	carwgoB0584
Bhi01G001478	Silver-seed gourd	carwgoB0896