Bhi01G001438 (gene) Wax gourd

Overview
NameBhi01G001438
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionMADS-box transcription factor
Locationchr1 : 40883927 .. 40885539 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGAAAACCCAGAAGAAACAGAGGAAAAAAAAAACAATGTAAATTATAATCCCCCCCAAAAAATCTATTTAACATAATATTCAAAAACGGTCAACAGTTGACCGGCGGGAAATTAAAGAATGCCTGGCGCGCAAATAAACGGCAAGAAGACGACGGACGGAAATTTAACCGTTAAAGAAGACCGACGCGCAATTAACCGGTAAGAGGGTGATCGGAAGGGTATAGGAAGATGACCGGCGCGTAACATAAACGGTAAGAAGATGACCGGAAATTGCAGACCCATTCCAATTGGTGACTGGCGAACGCAGACCCATTCCATTTGGTTCAATCTATTTCTCTCGTTTCTCTCTGTTTTACTCTGTTTGTGGTTTCGTGAGATTGAAGAACAATGGGCAGAGGAACATTGAACCTTAAACTGATTCCCAACCTCAAATCTCGGAGAACAACCTTTGTAAAGAGGAAGAAAAGCCTAATGAAGAAGGCCTACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCCACTCTATGATCCGTTCATATAAATCTCATTCTTTCCCCAAACTATCCCGCAACTCTTATAATCTCCACCAATTTTTCTCTCATCGTATGAACAAAATCGCAACAGAGACGTCTAAGCTTCGTCACAACGTTGACAAATTCAAGGATCGCCACCTCGATTCTCTATCTGAACATCAATTGGAGGAGTTGTTGGCTTCTCTGGATTCCAAAATTGGAGTTGTAGACGGCATGATTCAGTTTATGGAGGCTGATTATGATCACTTGATTGAGGAAGTATCTGGATTTTCGAGTATTGACACACCATCATTCCTTCCTTCTGAAACAAAGGAAACCCCTGAATTAGACATAACGGAGTGGTTGATTGGGACAAATGGGCTTGAATACAATGTCGAGGAGTTCATGGAGACCGATAACGGTCACTTGATTGAGGAAACATCCGGAATTTTAAGCATTGACACACCATCATTCAGTCCTTTTGAAACAGAGGAACTCGACATATCGGAGTTGTTAATTGGGCCAAATGGGCTTGAATACAATGTCGAGGAGTTCGTGGAGGCCAATAATGATCACTTGATTGAGGAAGCATCTAGAATTTCAGGCATTAACACACCATCATTCAGTCCTTTCGAAACAGAGGAACTCGGCATATCAGAGTTGTTGATTGGGACAAATGGGCTTGAATACAATGTCGAGAAGCTCATGGAGGCCAATAACGATCACTTGATTGAGGAAGCATCTGCAATTTCAAGCATTAACACACCATCATTCAGTCCTTTCGAAACAGAGGAACTCGACATATCGGAGTTGTTGATTGAGCCAGATGGGTTTGAATACAATGTCGAGGATTTTCAATCTCTGTTAGAGGACGAGCTTGTCGGAACCCTGGTTTAGAACAATCCCTTTAAGTTTGATTACGAACTCATTACATAGTTTTTCCATGAGAGTTTTCTTGCTCTCTCTTTCTCTATCTACATTCTTCTTTGTAAATATATTGATTTTAGTATAATGGAAATGAAGCTTC

mRNA sequence

AAAAAGAAAACCCAGAAGAAACAGAGGAAAAAAAAAACAATGTAAATTATAATCCCCCCCAAAAAATCTATTTAACATAATATTCAAAAACGGTCAACAGTTGACCGGCGGGAAATTAAAGAATGCCTGGCGCGCAAATAAACGGCAAGAAGACGACGGACGGAAATTTAACCGTTAAAGAAGACCGACGCGCAATTAACCGGTAAGAGGGTGATCGGAAGGGTATAGGAAGATGACCGGCGCGTAACATAAACGGTAAGAAGATGACCGGAAATTGCAGACCCATTCCAATTGGTGACTGGCGAACGCAGACCCATTCCATTTGGTTCAATCTATTTCTCTCGTTTCTCTCTGTTTTACTCTGTTTGTGGTTTCGTGAGATTGAAGAACAATGGGCAGAGGAACATTGAACCTTAAACTGATTCCCAACCTCAAATCTCGGAGAACAACCTTTGTAAAGAGGAAGAAAAGCCTAATGAAGAAGGCCTACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCCACTCTATGATCCGTTCATATAAATCTCATTCTTTCCCCAAACTATCCCGCAACTCTTATAATCTCCACCAATTTTTCTCTCATCGTATGAACAAAATCGCAACAGAGACGTCTAAGCTTCGTCACAACGTTGACAAATTCAAGGATCGCCACCTCGATTCTCTATCTGAACATCAATTGGAGGAGTTGTTGGCTTCTCTGGATTCCAAAATTGGAGTTGTAGACGGCATGATTCAGTTTATGGAGGCTGATTATGATCACTTGATTGAGGAAGTATCTGGATTTTCGAGTATTGACACACCATCATTCCTTCCTTCTGAAACAAAGGAAACCCCTGAATTAGACATAACGGAGTGGTTGATTGGGACAAATGGGCTTGAATACAATGTCGAGGAGTTCATGGAGACCGATAACGGTCACTTGATTGAGGAAACATCCGGAATTTTAAGCATTGACACACCATCATTCAGTCCTTTTGAAACAGAGGAACTCGACATATCGGAGTTGTTAATTGGGCCAAATGGGCTTGAATACAATGTCGAGGAGTTCGTGGAGGCCAATAATGATCACTTGATTGAGGAAGCATCTAGAATTTCAGGCATTAACACACCATCATTCAGTCCTTTCGAAACAGAGGAACTCGGCATATCAGAGTTGTTGATTGGGACAAATGGGCTTGAATACAATGTCGAGAAGCTCATGGAGGCCAATAACGATCACTTGATTGAGGAAGCATCTGCAATTTCAAGCATTAACACACCATCATTCAGTCCTTTCGAAACAGAGGAACTCGACATATCGGAGTTGTTGATTGAGCCAGATGGGTTTGAATACAATGTCGAGGATTTTCAATCTCTGTTAGAGGACGAGCTTGTCGGAACCCTGGTTTAGAACAATCCCTTTAAGTTTGATTACGAACTCATTACATAGTTTTTCCATGAGAGTTTTCTTGCTCTCTCTTTCTCTATCTACATTCTTCTTTGTAAATATATTGATTTTAGTATAATGGAAATGAAGCTTC

Coding sequence (CDS)

ATGGGCAGAGGAACATTGAACCTTAAACTGATTCCCAACCTCAAATCTCGGAGAACAACCTTTGTAAAGAGGAAGAAAAGCCTAATGAAGAAGGCCTACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCCACTCTATGATCCGTTCATATAAATCTCATTCTTTCCCCAAACTATCCCGCAACTCTTATAATCTCCACCAATTTTTCTCTCATCGTATGAACAAAATCGCAACAGAGACGTCTAAGCTTCGTCACAACGTTGACAAATTCAAGGATCGCCACCTCGATTCTCTATCTGAACATCAATTGGAGGAGTTGTTGGCTTCTCTGGATTCCAAAATTGGAGTTGTAGACGGCATGATTCAGTTTATGGAGGCTGATTATGATCACTTGATTGAGGAAGTATCTGGATTTTCGAGTATTGACACACCATCATTCCTTCCTTCTGAAACAAAGGAAACCCCTGAATTAGACATAACGGAGTGGTTGATTGGGACAAATGGGCTTGAATACAATGTCGAGGAGTTCATGGAGACCGATAACGGTCACTTGATTGAGGAAACATCCGGAATTTTAAGCATTGACACACCATCATTCAGTCCTTTTGAAACAGAGGAACTCGACATATCGGAGTTGTTAATTGGGCCAAATGGGCTTGAATACAATGTCGAGGAGTTCGTGGAGGCCAATAATGATCACTTGATTGAGGAAGCATCTAGAATTTCAGGCATTAACACACCATCATTCAGTCCTTTCGAAACAGAGGAACTCGGCATATCAGAGTTGTTGATTGGGACAAATGGGCTTGAATACAATGTCGAGAAGCTCATGGAGGCCAATAACGATCACTTGATTGAGGAAGCATCTGCAATTTCAAGCATTAACACACCATCATTCAGTCCTTTCGAAACAGAGGAACTCGACATATCGGAGTTGTTGATTGAGCCAGATGGGTTTGAATACAATGTCGAGGATTTTCAATCTCTGTTAGAGGACGAGCTTGTCGGAACCCTGGTTTAG

Protein sequence

MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRHLDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSETKETPELDITEWLIGTNGLEYNVEEFMETDNGHLIEETSGILSIDTPSFSPFETEELDISELLIGPNGLEYNVEEFVEANNDHLIEEASRISGINTPSFSPFETEELGISELLIGTNGLEYNVEKLMEANNDHLIEEASAISSINTPSFSPFETEELDISELLIEPDGFEYNVEDFQSLLEDELVGTLV
Homology
[Close]
BLAST of Bhi01G001438 vs. TAIR10
Match: AT5G58890.1 (AGAMOUS-like 82)

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-10
Identity = 45/139 (32.37%), Postives = 72/139 (51.80%), Query Frame = 0 

Query: 6   LNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----THFETWP 65
           ++L+ I N K+R TT+ KRK SL KKA E STLC V+TC+ +      +    +  E WP
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65

Query: 66  PNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSH--RMNKIATETSKLRHNVDKFKDRHL 125
            +  ++ ++IR YK  +     R   N+  F +   + N++ T+    R N     +  L
Sbjct: 66  KDETKVRAIIRKYKD-TVSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKL 125

Query: 126 DSLSEHQLEELLASLDSKI 139
           D  S  QL  +  ++DSK+
Sbjct: 126 DKCSREQLHGIFCAVDSKL 143

[Close]
BLAST of Bhi01G001438 vs. TAIR10
Match: AT2G03710.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  + I S+      F + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLSRN--SYNLHQFFSHRMNKIATETSKLRHNVDKFKDRH 120
           P     +   +  Y+ HS+  +  N  + +L   +   + K+ +    L+H+        
Sbjct: 61  PSG---MARTVDKYRKHSYATMDPNQSAKDLQDKYQDYL-KLKSRVEILQHSQRHLLGEE 120

Query: 121 LDSLSEHQLEELLASLDSKI 139
           L  +  ++LE L   +D+ +
Sbjct: 121 LSEMDVNELEHLERQVDASL 136

[Close]
BLAST of Bhi01G001438 vs. TAIR10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 44/137 (32.12%), Postives = 64/137 (46.72%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           +GRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + I      ST    +
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIF-----STRGRLY 75

Query: 61  PPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRHLD 120
              ++ +   I  YK     K   ++ N              E SKLR  +     R + 
Sbjct: 76  EYANNSVRGTIERYK-----KACSDAVNPPTITEANTQYYQQEASKLRRQI-----RDIQ 135

Query: 121 SLSEHQLEELLASLDSK 138
           +L+ H L E L SL+ K
Sbjct: 136 NLNRHILGESLGSLNFK 137

[Close]
BLAST of Bhi01G001438 vs. TAIR10
Match: AT5G51860.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 42/145 (28.97%), Postives = 66/145 (45.52%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           M RG + +K I N+ SR+ TF KR+  L KKA+ELS LCD Q    I S       F + 
Sbjct: 1   MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAMIFSQKGRLYEFAS- 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLR----HNVDKFKD 120
                 I + I+ Y  +        ++ + Q+      ++ T   K+     HN  K   
Sbjct: 61  ----SDIRNTIKRYAEYKREYFVAETHPIEQYVQGLKKEMVTMVKKIEVLEVHN-RKMMG 120

Query: 121 RHLDSLSEHQLEELLASLDSKIGVV 142
           + LDS S  +L E+   ++  + +V
Sbjct: 121 QSLDSCSVKELSEIATQIEKSLHMV 139

[Close]
BLAST of Bhi01G001438 vs. TAIR10
Match: AT5G26580.1 (AGAMOUS-like-34)

HSP 1 Score: 55.5 bits (132), Expect = 8.2e-08
Identity = 31/62 (50.00%), Postives = 35/62 (56.45%), Query Frame = 0 

Query: 1  MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
          MG   + L LI N  SR T+F+KRK  +MKK YELSTLC VQ C  I S   P   F   
Sbjct: 1  MGMKKVKLSLIANEISRETSFMKRKNGIMKKLYELSTLCGVQACTLIYSPFIPVPEFLEM 60

Query: 61 PP 63
           P
Sbjct: 61 SP 62

[Close]
BLAST of Bhi01G001438 vs. Swiss-Prot
Match: sp|Q9FIM0|AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-09
Identity = 45/139 (32.37%), Postives = 72/139 (51.80%), Query Frame = 0 

Query: 6   LNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPS----THFETWP 65
           ++L+ I N K+R TT+ KRK SL KKA E STLC V+TC+ +      +    +  E WP
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWP 65

Query: 66  PNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSH--RMNKIATETSKLRHNVDKFKDRHL 125
            +  ++ ++IR YK  +     R   N+  F +   + N++ T+    R N     +  L
Sbjct: 66  KDETKVRAIIRKYKD-TVSTSCRKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKL 125

Query: 126 DSLSEHQLEELLASLDSKI 139
           D  S  QL  +  ++DSK+
Sbjct: 126 DKCSREQLHGIFCAVDSKL 143

[Close]
BLAST of Bhi01G001438 vs. Swiss-Prot
Match: sp|Q40872|AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.5e-08
Identity = 47/157 (29.94%), Postives = 72/157 (45.86%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           +GRG + +K I N  +R+ TF KR+  L+KKAYELS LCD +  + +      ST    +
Sbjct: 17  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVF-----STRGRLY 76

Query: 61  PPNHDQIHSMIRSYKS--HSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRH 120
              ++ +   I  YK      P  S  S    QF+    +K+  E S ++ N        
Sbjct: 77  EYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGES 136

Query: 121 LDSLSEHQLEELLASLD---SKIGVVDGMIQFMEADY 153
           L SL+   L+ L   L+   S+I      + F E +Y
Sbjct: 137 LGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEY 168

[Close]
BLAST of Bhi01G001438 vs. Swiss-Prot
Match: sp|Q8RU31|MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS21 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.0e-07
Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRG + +K I N  SR+ TF KR+  L+KKAYEL+ LCD +  + + S       F   
Sbjct: 1   MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFS-- 60

Query: 61  PPNHDQIHSMIRSYK------SHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKF 120
             N +   S I  YK      S S P +  NS   HQ+F         E +K+RH +   
Sbjct: 61  --NVNSTRSTIERYKKASASTSGSAPVIDVNS---HQYFQQ-------EAAKMRHQIQTL 120

Query: 121 K--DRHL--DSLSEHQLEELLASLDSKI 139
           +  +RHL  +S+     +E L SL++++
Sbjct: 121 QNANRHLIGESIGNMTAKE-LKSLENRL 133

[Close]
BLAST of Bhi01G001438 vs. Swiss-Prot
Match: sp|Q2QW53|MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS13 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-07
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRG + +K I N  SR+ TF KR+  L+KKAYELS LCD +  + + S       +   
Sbjct: 1   MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS-- 60

Query: 61  PPNHDQIHSMIRSY-KSHSFPKLSRN---SYNLHQFFSHRMNKIATETSKLRHNVDKFK- 120
             N++ + + I  Y K+H+    S       N  Q++         E++KLRH +   + 
Sbjct: 61  --NNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQ-------ESAKLRHQIQMLQN 120

Query: 121 -DRHL--DSLSEHQLEELLASLDSKI 139
            ++HL  D++S   L+E L  L+S++
Sbjct: 121 TNKHLVGDNVSNLSLKE-LKQLESRL 134

[Close]
BLAST of Bhi01G001438 vs. Swiss-Prot
Match: sp|P29383|AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana OX=3702 GN=AGL3 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 3.0e-07
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRG + LK I N  +R+ TF KR+  L+KKAYELS LCD +  + I S+      F + 
Sbjct: 1   MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLSRN--SYNLHQFFSHRMNKIATETSKLRHNVDKFKDRH 120
           P     +   +  Y+ HS+  +  N  + +L   +   + K+ +    L+H+        
Sbjct: 61  PSG---MARTVDKYRKHSYATMDPNQSAKDLQDKYQDYL-KLKSRVEILQHSQRHLLGEE 120

Query: 121 LDSLSEHQLEELLASLDSKI 139
           L  +  ++LE L   +D+ +
Sbjct: 121 LSEMDVNELEHLERQVDASL 136

[Close]
BLAST of Bhi01G001438 vs. TrEMBL
Match: tr|A0A0A0LAL9|A0A0A0LAL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.6e-58
Identity = 132/203 (65.02%), Postives = 155/203 (76.35%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRG L+LKLIPN KSRRTTF+KRKKSL+KKAYELSTLCDVQTC+FIASDCDPSTHFETW
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRHLD 120
           PPNH QIH MIRSYKSHSF K   +SY+L++FFS R NKI T TSKL HNV       +D
Sbjct: 61  PPNHHQIHQMIRSYKSHSFTK-PNSSYDLNRFFSDRKNKILTNTSKLLHNV-------VD 120

Query: 121 SLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSET--KET 180
             SEHQL ELL +LDSKI V + MI+FMEADYDHLI++  G   +DTP   PS+T  +ET
Sbjct: 121 HQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIG---MDTP---PSQTEDEET 180

Query: 181 PELDITEWLIGTNGL-EYNVEEF 201
            + ++++     +   EYNVE F
Sbjct: 181 TQFNVSDLFNEPDEFEEYNVEGF 189

[Close]
BLAST of Bhi01G001438 vs. TrEMBL
Match: tr|A0A1S3CDG6|A0A1S3CDG6_CUCME (MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.1e-26
Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFI----ASDCDPSTH 60
           MGRG L++KLI N KSR+TTF KRK SL++KAYELSTLCDV+ CVF+     S+      
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVFVHGPNQSNDQSPLQ 60

Query: 61  FETWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFK- 120
             TWPP  D+++SMI SYK++   K +R ++ L  FFS R  K+ T+ SKLR +V + + 
Sbjct: 61  LHTWPPCPDEVNSMIASYKTNCLHKRARKAFGLIDFFSERKKKVETDMSKLRKDVAEARF 120

Query: 121 ---DRHLDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDT 168
              D  LD L E QL  L+  LDSKI +    I+     Y+  +EE +   S  T
Sbjct: 121 TKWDERLDHLLEDQLRVLMMELDSKIEIAKKRIEIETECYN--VEEGTSVESSQT 173

[Close]
BLAST of Bhi01G001438 vs. TrEMBL
Match: tr|A0A0A0LME6|A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-25
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFI----ASDCDPSTH 60
           MGRG L++KLI N KSR+TTF KRK SL++KAYELSTLCDV+ CV +     S+      
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHGPNQSNDQSPLQ 60

Query: 61  FETWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFK- 120
             TWPP+ D++++MI SYK++   K  R S+ L  FFS R  K+ T+ SKLR +V + + 
Sbjct: 61  LHTWPPSADEVNNMIASYKTNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDVSEERF 120

Query: 121 ---DRHLDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSS 165
              D  LD L E QL  L+  LDSKI +    I+ +  + ++ +EE +   S
Sbjct: 121 PSWDERLDHLLEDQLRVLMVELDSKIEIAKKRIE-IATENNYNVEEGTSVES 171

[Close]
BLAST of Bhi01G001438 vs. TrEMBL
Match: tr|A0A2N9FVF0|A0A2N9FVF0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19065 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.1e-22
Identity = 69/164 (42.07%), Postives = 93/164 (56.71%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASD--CDPSTHFE 60
           MGRG L ++LI + KSR  TF KRKK LMKKAYE STLC V TC+ I      D      
Sbjct: 1   MGRGKLTMELIKSEKSRNVTFQKRKKGLMKKAYEFSTLCGVDTCMIIYGPKFQDRPMELG 60

Query: 61  TWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFK--- 120
           TWP NHD++  MI  YK ++  K SR S  L  FF  R  K+  E S+LR N+ K K   
Sbjct: 61  TWPQNHDEVVKMINRYKENTMHKRSRGSSTLSNFFIERNKKVEIEISRLRKNIFKTKYPT 120

Query: 121 -DRHLDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEE 159
            D  ++++SE QL  +L  +D K   +   ++ ++ +   LIE+
Sbjct: 121 WDDRIETMSEDQLMVVLDVIDEKFEALTRRMKMLQGEQQLLIEK 164

[Close]
BLAST of Bhi01G001438 vs. TrEMBL
Match: tr|M5X3X5|M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G110900 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 9.5e-19
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASD--CDPSTHFE 60
           MGRG L ++LI N +SR+TTF KR K +MKKAYE STLC+V  C+ I      D     +
Sbjct: 1   MGRGRLKMELIANERSRKTTFQKRSKGMMKKAYEFSTLCEVDVCIIIYGPKLTDRPPELQ 60

Query: 61  TWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFK--- 120
           TWP N +Q+  +I  YK+ +  K ++ +++L      R NK+  +  + R  + + K   
Sbjct: 61  TWPQNSEQVDRIINKYKASTMSKPAKKTFDLSDLLMDRKNKVYADIYRARKEMYEAKYPT 120

Query: 121 -DRHLDSLSEHQLEELLASLDSKI 139
            D  ++S SE+QLE LL  LD+K+
Sbjct: 121 WDERIESFSENQLEALLDKLDAKL 144

[Close]
BLAST of Bhi01G001438 vs. NCBI nr
Match: XP_004145650.1 (PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus] >KGN57712.1 hypothetical protein Csa_3G258140 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 5.4e-58
Identity = 132/203 (65.02%), Postives = 155/203 (76.35%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRG L+LKLIPN KSRRTTF+KRKKSL+KKAYELSTLCDVQTC+FIASDCDPSTHFETW
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDCDPSTHFETW 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRHLD 120
           PPNH QIH MIRSYKSHSF K   +SY+L++FFS R NKI T TSKL HNV       +D
Sbjct: 61  PPNHHQIHQMIRSYKSHSFTK-PNSSYDLNRFFSDRKNKILTNTSKLLHNV-------VD 120

Query: 121 SLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSET--KET 180
             SEHQL ELL +LDSKI V + MI+FMEADYDHLI++  G   +DTP   PS+T  +ET
Sbjct: 121 HQSEHQLMELLDALDSKIRVANDMIEFMEADYDHLIDQAIG---MDTP---PSQTEDEET 180

Query: 181 PELDITEWLIGTNGL-EYNVEEF 201
            + ++++     +   EYNVE F
Sbjct: 181 TQFNVSDLFNEPDEFEEYNVEGF 189

[Close]
BLAST of Bhi01G001438 vs. NCBI nr
Match: XP_022934582.1 (agamous-like MADS-box protein AGL6 [Cucurbita moschata])

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 127/190 (66.84%), Postives = 146/190 (76.84%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRGTL+LKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IAS+      FETW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASE-----EFETW 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLS-RNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRH- 120
           P +  Q+ +MIRSYKS SF K S ++SY+L+QFFS R NKI TETSKLR  V K KD + 
Sbjct: 61  PSDRTQVEAMIRSYKSQSFCKQSAKSSYDLNQFFSDRKNKIVTETSKLREKVQKSKDTNS 120

Query: 121 ---LDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSET 180
              LDSLSEHQL+ L+A+LDSKIGV D MI+FMEADYD+LIE     SSID   F P ET
Sbjct: 121 DHCLDSLSEHQLKALMATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQIFSPLET 180

Query: 181 KETPELDITE 186
           + +PEL+I+E
Sbjct: 181 EASPELNISE 185

[Close]
BLAST of Bhi01G001438 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.1 bits (562), Expect = 6.2e-54
Identity = 126/190 (66.32%), Postives = 147/190 (77.37%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFIASDCDPSTHFETW 60
           MGRGTL+LKLI N KSRRTTF KRKKSLMKKAYELSTLCDVQTCV IASD      F+TW
Sbjct: 1   MGRGTLSLKLISNPKSRRTTFQKRKKSLMKKAYELSTLCDVQTCVVIASD-----EFQTW 60

Query: 61  PPNHDQIHSMIRSYKSHSFPKLS-RNSYNLHQFFSHRMNKIATETSKLRHNVDKFKDRH- 120
           P + +Q+ +MIRSYKS SF K S ++SY+L+QFFS R NKI TETSKLR  V K KD + 
Sbjct: 61  PSDRNQVEAMIRSYKSQSFCKHSAKSSYDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNS 120

Query: 121 ---LDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSSIDTPSFLPSET 180
              LDSLSEHQL+ LLA+LDSKIGV D MI+FMEADYD+LIE     SSID  +  P ET
Sbjct: 121 DHCLDSLSEHQLKVLLATLDSKIGVADSMIEFMEADYDYLIEGAVEISSIDKQTLSPLET 180

Query: 181 KETPELDITE 186
           + +P+L+I+E
Sbjct: 181 EASPKLNISE 185

[Close]
BLAST of Bhi01G001438 vs. NCBI nr
Match: XP_023528957.1 (agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132.1 bits (331), Expect = 3.8e-27
Identity = 93/227 (40.97%), Postives = 120/227 (52.86%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFI-----ASDCDP-- 60
           M RG L+  LI N KSR +TF +RK SLMKKAYELSTLCDV+TCV I     A D DP  
Sbjct: 1   MVRGKLSFNLIRNRKSRCSTFKQRKNSLMKKAYELSTLCDVRTCVLINGPGFAPDEDPSL 60

Query: 61  -STHFETWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVD 120
            S  F TWP N  ++  MI +YK+ +     R  ++L  +FS R  K+ TE  K R  V 
Sbjct: 61  SSVEFHTWPSNRSEVEHMIHAYKNGNCNLQKRKCFDLSDYFSDRKRKLVTEMCKHREKVG 120

Query: 121 KFK----DRHLDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHL-----------IE 180
           K      D  LD LSE QL E +  LDS+I     MI FM+AD ++L           + 
Sbjct: 121 KIMWPDWDERLDCLSEQQLREFMNGLDSRIEAAGRMIDFMDADNENLFGMFSCEEYENVV 180

Query: 181 EVSGFSSIDTPSFLPSETKE---TPELDITEWLIGTN--GLEYNVEE 200
           ++ G SS   P  +  E+ +   TP     E  IG N   LE+ +E+
Sbjct: 181 QMGGDSSTPVPPLVELESPDSLNTPNXXXXEDEIGCNFENLEFLLED 227

[Close]
BLAST of Bhi01G001438 vs. NCBI nr
Match: XP_023533865.1 (MADS-box transcription factor PHERES 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.7 bits (330), Expect = 4.9e-27
Identity = 82/172 (47.67%), Postives = 105/172 (61.05%), Query Frame = 0 

Query: 1   MGRGTLNLKLIPNLKSRRTTFVKRKKSLMKKAYELSTLCDVQTCVFI----ASDCDPSTH 60
           MGRG L++KLI N KSR+TTF KRK SLM+KAYELSTLCDV+TCV +     SD  P   
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFSKRKNSLMRKAYELSTLCDVRTCVIVHGPNQSDQSP--- 60

Query: 61  FETWPPNHDQIHSMIRSYKSHSFPKLSRNSYNLHQFFSHRMNKIATETSKLRHNVDKFK- 120
             TWP + D ++ MI SYKS+   K +R S+NL  FFS R  KI ++ SKLR +V K + 
Sbjct: 61  IHTWPSSRDSVNDMIASYKSNCLHKRTRKSFNLFDFFSDRKKKIESDMSKLRKDVAKARY 120

Query: 121 ---DRHLDSLSEHQLEELLASLDSKIGVVDGMIQFMEADYDHLIEEVSGFSS 165
              D  L+ L E QL  L+  +DSK+      I+ +E       E VSG S+
Sbjct: 121 PKWDERLECLMEEQLRVLMVEIDSKLDATKRRIENVE-------ERVSGGSN 162

The following BLAST results are available for this feature:
BLAST of Bhi01G001438 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58890.11.0e-1032.37AGAMOUS-like 82[more]
AT2G03710.11.6e-0829.29K-box region and MADS-box transcription factor family protein [more]
AT2G42830.21.6e-0832.12K-box region and MADS-box transcription factor family protein [more]
AT5G51860.16.3e-0828.97K-box region and MADS-box transcription factor family protein [more]
AT5G26580.18.2e-0850.00AGAMOUS-like-34[more]
BLAST of Bhi01G001438 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FIM0|AGL82_ARATH1.9e-0932.37Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=... [more]
sp|Q40872|AG_PANGI3.5e-0829.94Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1[more]
sp|Q8RU31|MAD21_ORYSJ1.0e-0733.78MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
sp|Q2QW53|MAD13_ORYSJ2.3e-0732.19MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
sp|P29383|AGL3_ARATH3.0e-0729.29Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana OX=3702 GN=AGL3 PE=1 ... [more]
BLAST of Bhi01G001438 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAL9|A0A0A0LAL9_CUCSA3.6e-5865.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1[more]
tr|A0A1S3CDG6|A0A1S3CDG6_CUCME2.1e-2645.14MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1[more]
tr|A0A0A0LME6|A0A0A0LME6_CUCSA1.1e-2544.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE=4 SV=1[more]
tr|A0A2N9FVF0|A0A2N9FVF0_FAGSY4.1e-2242.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19065 PE=4 SV=1[more]
tr|M5X3X5|M5X3X5_PRUPE9.5e-1939.58Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G110900 PE=4 SV=1[more]
BLAST of Bhi01G001438 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145650.15.4e-5865.02PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus] >KGN57712.1 hypo... [more]
XP_022934582.11.6e-5466.84agamous-like MADS-box protein AGL6 [Cucurbita moschata][more]
XP_023526169.16.2e-5466.32agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo][more]
XP_023528957.13.8e-2740.97agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo][more]
XP_023533865.14.9e-2747.67MADS-box transcription factor PHERES 2-like [Cucurbita pepo subsp. pepo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000982transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0000987core promoter proximal region sequence-specific DNA binding
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR033897MADS_SRF-like
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048481 plant ovule development
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005634 nucleus
molecular_function GO:0000987 core promoter proximal region sequence-specific DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008134 transcription factor binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0000982 transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001438Bhi01M001438mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 3..23
score: 40.64
coord: 38..59
score: 23.04
coord: 23..38
score: 65.84
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..62
e-value: 2.9E-17
score: 73.4
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 11..51
e-value: 4.7E-15
score: 54.7
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 18.376
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 14..100
e-value: 1.2E-14
score: 56.0
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 2..97
NoneNo IPR availablePANTHERPTHR11945:SF176AGAMOUS-LIKE MADS-BOX PROTEIN AGL82coord: 1..147
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..147
IPR033897MADS SRF-likeCDDcd00266MADS_SRF_likecoord: 2..69
e-value: 4.44893E-21
score: 85.0043

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001438Watermelon (Charleston Gray)wcgwgoB441
Bhi01G001438Watermelon (97103) v2wgowmbB194
Bhi01G001438Watermelon (97103) v1wgowmB217
Bhi01G001438Silver-seed gourdcarwgoB0584
Bhi01G001438Silver-seed gourdcarwgoB0896
Bhi01G001438Cucumber (Gy14) v1cgywgoB005
Bhi01G001438Cucumber (Gy14) v2cgybwgoB259
Bhi01G001438Cucurbita maxima (Rimu)cmawgoB0319
Bhi01G001438Cucurbita maxima (Rimu)cmawgoB0562
Bhi01G001438Cucurbita moschata (Rifu)cmowgoB0307
Bhi01G001438Cucurbita moschata (Rifu)cmowgoB0559
Bhi01G001438Cucurbita pepo (Zucchini)cpewgoB0673
Bhi01G001438Cucurbita pepo (Zucchini)cpewgoB0773
Bhi01G001438Wild cucumber (PI 183967)cpiwgoB271
Bhi01G001438Cucumber (Chinese Long) v3cucwgoB274
Bhi01G001438Cucumber (Chinese Long) v2cuwgoB271
Bhi01G001438Bottle gourd (USVL1VR-Ls)lsiwgoB447
Bhi01G001438Melon (DHL92) v3.6.1medwgoB535
Bhi01G001438Melon (DHL92) v3.5.1mewgoB542