Bhi01G001436 (gene) Wax gourd

Overview
NameBhi01G001436
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionAgamous-like MADS-box protein
Locationchr1 : 40830482 .. 40831093 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGGCATACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCAATGCTATGATCCGTTCCTACAAATCCCGCTCTTTCCCCAAACACTCATCCCGCAACTCCTCTTATAATCTCAAACAATTCTTCTCCGATCGCAAGAACAAAATTCTAACAGACACATCTAAACTGCGCCACAATGTTGAGGATCACCACCTTGATTCTCTATCCGAGCATCAATTGAAGGAGCTGTTGGCCACTTTGGACTCCAAAATTGGAGTTGCAGATGGCATGATTCAGTTCATGGATGCCGATTATGACCACTTGATTGAGCAAGCCTTTGGCATGGACACACTTCCTTCTGAAACAGAGGAACCCACTACTGAATGTGACATATCCGAGTTTTTGATTGAGCCAGACGAGTTTGAGTACAATGTGGAAGGTTTTCAATCTCCATTGGAGGACGAGTTTGAATACAATGTGGAGGGTTTTCAATCTCTATTGGAGGACGAGTTTCTCGGAACGCTAGTTCTAAATAACCCCTTTAAGTTCGATTCTTAA

mRNA sequence

ATGAAGAAGGCATACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCAATGCTATGATCCGTTCCTACAAATCCCGCTCTTTCCCCAAACACTCATCCCGCAACTCCTCTTATAATCTCAAACAATTCTTCTCCGATCGCAAGAACAAAATTCTAACAGACACATCTAAACTGCGCCACAATGTTGAGGATCACCACCTTGATTCTCTATCCGAGCATCAATTGAAGGAGCTGTTGGCCACTTTGGACTCCAAAATTGGAGTTGCAGATGGCATGATTCAGTTCATGGATGCCGATTATGACCACTTGATTGAGCAAGCCTTTGGCATGGACACACTTCCTTCTGAAACAGAGGAACCCACTACTGAATGTGACATATCCGAGTTTTTGATTGAGCCAGACGAGTTTGAGTACAATGTGGAAGGTTTTCAATCTCCATTGGAGGACGAGTTTGAATACAATGTGGAGGGTTTTCAATCTCTATTGGAGGACGAGTTTCTCGGAACGCTAGTTCTAAATAACCCCTTTAAGTTCGATTCTTAA

Coding sequence (CDS)

ATGAAGAAGGCATACGAGCTTTCCACCCTTTGCGATGTTCAAACCTGCGTTTTCATCGCTTCTGACTGTGACCCATCAACCCACTTCGAAACTTGGCCTCCCAATCACGATCAAATCAATGCTATGATCCGTTCCTACAAATCCCGCTCTTTCCCCAAACACTCATCCCGCAACTCCTCTTATAATCTCAAACAATTCTTCTCCGATCGCAAGAACAAAATTCTAACAGACACATCTAAACTGCGCCACAATGTTGAGGATCACCACCTTGATTCTCTATCCGAGCATCAATTGAAGGAGCTGTTGGCCACTTTGGACTCCAAAATTGGAGTTGCAGATGGCATGATTCAGTTCATGGATGCCGATTATGACCACTTGATTGAGCAAGCCTTTGGCATGGACACACTTCCTTCTGAAACAGAGGAACCCACTACTGAATGTGACATATCCGAGTTTTTGATTGAGCCAGACGAGTTTGAGTACAATGTGGAAGGTTTTCAATCTCCATTGGAGGACGAGTTTGAATACAATGTGGAGGGTTTTCAATCTCTATTGGAGGACGAGTTTCTCGGAACGCTAGTTCTAAATAACCCCTTTAAGTTCGATTCTTAA

Protein sequence

MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYNVEGFQSPLEDEFEYNVEGFQSLLEDEFLGTLVLNNPFKFDS
Homology
[Close]
BLAST of Bhi01G001436 vs. TAIR10
Match: AT5G58890.1 (AGAMOUS-like 82)

HSP 1 Score: 47.8 bits (112), Expect = 9.5e-06
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0 

Query: 2   KKAYELSTLCDVQTCVFIASDCDPS----THFETWPPNHDQINAMIRSYKSRSFPKHSSR 61
           KKA E STLC V+TC+ +      +    +  E WP +  ++ A+IR YK       +S 
Sbjct: 30  KKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWPKDETKVRAIIRKYKD---TVSTSC 89

Query: 62  NSSYNLKQFFSD--RKNKILTDTSKLRHNVE---DHHLDSLSEHQLKELLATLDSKIGVA 113
               N++ F +D  + N+++T     R N     +  LD  S  QL  +   +DSK+  A
Sbjct: 90  RKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]
BLAST of Bhi01G001436 vs. TAIR10
Match: AT5G40220.1 (AGAMOUS-like 43)

HSP 1 Score: 45.1 bits (105), Expect = 6.2e-05
Identity = 37/128 (28.91%), Postives = 60/128 (46.88%), Query Frame = 0 

Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA EL TLCD++ CV       P    +TWPP  +++  +   Y   +  +   R  S 
Sbjct: 30  KKASELCTLCDIEACVIYYG---PDGELKTWPPEREKVRDIALRYSQLN--EALRRKKSV 89

Query: 62  NLKQFFS-DRKNKILTDTSKLRH------NVEDHHL-DSLSEHQLKELLATLDSKIGVAD 121
           NL  F +  +KNK L +T K R       NV  + L D     Q+  L+ +L+  +    
Sbjct: 90  NLHGFLNKKKKNKGLKNTDKKRKTSLKKVNVLKYPLADHYPPDQVSPLIQSLELHVSKFH 149

[Close]
BLAST of Bhi01G001436 vs. TAIR10
Match: AT5G39750.1 (AGAMOUS-like 81)

HSP 1 Score: 44.7 bits (104), Expect = 8.1e-05
Identity = 33/133 (24.81%), Postives = 62/133 (46.62%), Query Frame = 0 

Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA EL TLCD++ CV       P    +TWPP  +++  +   Y   +  +   R  S 
Sbjct: 37  KKASELCTLCDIEACVIYYG---PDGELKTWPPEREKVEDIALRYSQLN--EALRRKKSV 96

Query: 62  NLKQFFSDRKNKI-------LTDTSKLRHNVEDHHL------DSLSEHQLKELLATLDSK 121
            L  F + +K+K        +TD   L+  +++ ++      D  S  Q+ +L+ +L+  
Sbjct: 97  TLYDFLNKKKDKTNLEKKAKITDNDDLKTCLKNVNILKYPLADHYSPDQVSQLIQSLEPH 156

[Close]
BLAST of Bhi01G001436 vs. TAIR10
Match: AT3G18650.1 (AGAMOUS-like 103)

HSP 1 Score: 44.3 bits (103), Expect = 1.1e-04
Identity = 35/118 (29.66%), Postives = 54/118 (45.76%), Query Frame = 0 

Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA ELS LCD+  CV        +   +TWP   +++ A+ R Y   S  K   R  S 
Sbjct: 45  KKAKELSILCDIDVCVICYGS---NGELKTWPEEREKVKAIARRYGELSETKR--RKGSV 104

Query: 62  NLKQFF---------SDRKNKI-LTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKI 110
           +L +F           + K KI +    K+++ V D   D+ S  QL  L+ +L+  +
Sbjct: 105 DLHEFLEKMNKDDPEKEEKKKIKVRRVPKVKYPVWDPRFDNYSVEQLMGLVQSLERNL 157

[Close]
BLAST of Bhi01G001436 vs. TAIR10
Match: AT5G41200.1 (AGAMOUS-like 75)

HSP 1 Score: 42.4 bits (98), Expect = 4.0e-04
Identity = 41/172 (23.84%), Postives = 73/172 (42.44%), Query Frame = 0 

Query: 2   KKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSSY 61
           KKA EL TLCD++ CV       P    +TWP   +++  +   Y   +  +   R  S 
Sbjct: 30  KKASELCTLCDIEACVIYYG---PDGELKTWPKEKEKVRDIALRYSLLN--EALRRKKSV 89

Query: 62  NLKQFFSDRKNKILTDTSK-----------LRHNVEDHHLDSLSEHQLKELLATLDSKIG 121
           NL  F + +KNK L + +K           L++ + DH+       Q+  L+ +L+  + 
Sbjct: 90  NLHGFLNKKKNKGLKNPNKKMKTSLKNVNILKYPLADHY----PPDQVSPLIQSLELHVS 149

Query: 122 VADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTTECDISEFLIEPDEFEYN 163
                ++F+++   +  +        PS     T   + S+F +    F YN
Sbjct: 150 KFQERLRFLESQKQNQTKPDH-QSLTPSSLNHYTQSLNPSQFSL----FMYN 187

[Close]
BLAST of Bhi01G001436 vs. Swiss-Prot
Match: sp|Q9FIM0|AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0 

Query: 2   KKAYELSTLCDVQTCVFIASDCDPS----THFETWPPNHDQINAMIRSYKSRSFPKHSSR 61
           KKA E STLC V+TC+ +      +    +  E WP +  ++ A+IR YK       +S 
Sbjct: 30  KKAQEFSTLCGVETCLIVYGPTKATDVVISEPEIWPKDETKVRAIIRKYKD---TVSTSC 89

Query: 62  NSSYNLKQFFSD--RKNKILTDTSKLRHNVE---DHHLDSLSEHQLKELLATLDSKIGVA 113
               N++ F +D  + N+++T     R N     +  LD  S  QL  +   +DSK+  A
Sbjct: 90  RKETNVETFVNDVGKGNEVVTKKRVKRENKYSSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]
BLAST of Bhi01G001436 vs. TrEMBL
Match: tr|A0A0A0LAL9|A0A0A0LAL9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-59
Identity = 136/207 (65.70%), Postives = 151/207 (72.95%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           +KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QI+ MIRSYKS SF K    NSS
Sbjct: 29  IKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK---PNSS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 120
           Y+L +FFSDRKNKILT+TSKL HNV DH     SEHQL ELL  LDSKI VA+ MI+FM+
Sbjct: 89  YDLNRFFSDRKNKILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFME 148

Query: 121 ADYDHLIEQAFGMDTLPSETE-EPTTECDISEFLIEPDEF-EYNVEGFQSPLXXXXXXXX 180
           ADYDHLI+QA GMDT PS+TE E TT+ ++S+   EPDEF EYNVEGFQS L        
Sbjct: 149 ADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDEFEEYNVEGFQSLL-------- 208

Query: 181 XXXXXXXXXXXLGTLVLNNP---FKFD 203
                      L TLV NNP   F FD
Sbjct: 209 -------EDKFLETLVQNNPIPDFDFD 213

[Close]
BLAST of Bhi01G001436 vs. TrEMBL
Match: tr|A0A1S3CDG6|A0A1S3CDG6_CUCME (MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 5.5e-16
Identity = 57/135 (42.22%), Postives = 76/135 (56.30%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFI----ASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSS 60
           ++KAYELSTLCDV+ CVF+     S+        TWPP  D++N+MI SYK+     H  
Sbjct: 29  LRKAYELSTLCDVRVCVFVHGPNQSNDQSPLQLHTWPPCPDEVNSMIASYKTNCL--HKR 88

Query: 61  RNSSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKI 120
              ++ L  FFS+RK K+ TD SKLR +V        D  LD L E QL+ L+  LDSKI
Sbjct: 89  ARKAFGLIDFFSERKKKVETDMSKLRKDVAEARFTKWDERLDHLLEDQLRVLMMELDSKI 148

Query: 121 GVADGMIQFMDADYD 125
            +A   I+     Y+
Sbjct: 149 EIAKKRIEIETECYN 161

[Close]
BLAST of Bhi01G001436 vs. TrEMBL
Match: tr|A0A0A0LME6|A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-16
Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFI----ASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSS 60
           ++KAYELSTLCDV+ CV +     S+        TWPP+ D++N MI SYK+    K   
Sbjct: 29  LRKAYELSTLCDVRVCVVVHGPNQSNDQSPLQLHTWPPSADEVNNMIASYKTNCLYKRVR 88

Query: 61  RNSSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKI 120
           +  S+ L  FFS+RK K+ TD SKLR +V        D  LD L E QL+ L+  LDSKI
Sbjct: 89  K--SFGLIDFFSERKKKVETDMSKLRKDVSEERFPSWDERLDHLLEDQLRVLMVELDSKI 148

Query: 121 GVADGMIQFMDADYDHLIEQAFGMDTLPSETEEPTTEC-DISEFLIEPDEFEYNVEGFQS 171
            +A   I+ +  + ++ +E+   +++   +T     +C  +  F  E +  +Y + G +S
Sbjct: 149 EIAKKRIE-IATENNYNVEEGTSVES-SGQTLNANMKCKQVMGFDHEEESTDYGMFGIRS 206

[Close]
BLAST of Bhi01G001436 vs. TrEMBL
Match: tr|A0A2N9FVF0|A0A2N9FVF0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19065 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 48/138 (34.78%), Postives = 70/138 (50.72%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFIASD--CDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRN 60
           MKKAYE STLC V TC+ I      D      TWP NHD++  MI  YK  +  K S  +
Sbjct: 29  MKKAYEFSTLCGVDTCMIIYGPKFQDRPMELGTWPQNHDEVVKMINRYKENTMHKRSRGS 88

Query: 61  SSYNLKQFFSDRKNKILTDTSKLRHNV-------EDHHLDSLSEHQLKELLATLDSKIGV 120
           S+  L  FF +R  K+  + S+LR N+        D  ++++SE QL  +L  +D K   
Sbjct: 89  ST--LSNFFIERNKKVEIEISRLRKNIFKTKYPTWDDRIETMSEDQLMVVLDVIDEKFEA 148

Query: 121 ADGMIQFMDADYDHLIEQ 130
               ++ +  +   LIE+
Sbjct: 149 LTRRMKMLQGEQQLLIEK 164

[Close]
BLAST of Bhi01G001436 vs. TrEMBL
Match: tr|M5X3X5|M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G110900 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.5e-10
Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFIASD--CDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRN 60
           MKKAYE STLC+V  C+ I      D     +TWP N +Q++ +I  YK+ +  K + + 
Sbjct: 29  MKKAYEFSTLCEVDVCIIIYGPKLTDRPPELQTWPQNSEQVDRIINKYKASTMSKPAKK- 88

Query: 61  SSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKI 110
            +++L     DRKNK+  D  + R  +        D  ++S SE+QL+ LL  LD+K+
Sbjct: 89  -TFDLSDLLMDRKNKVYADIYRARKEMYEAKYPTWDERIESFSENQLEALLDKLDAKL 144

[Close]
BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_004145650.1 (PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus] >KGN57712.1 hypothetical protein Csa_3G258140 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 3.6e-59
Identity = 136/207 (65.70%), Postives = 151/207 (72.95%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           +KKAYELSTLCDVQTC+FIASDCDPSTHFETWPPNH QI+ MIRSYKS SF K    NSS
Sbjct: 29  IKKAYELSTLCDVQTCLFIASDCDPSTHFETWPPNHHQIHQMIRSYKSHSFTK---PNSS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVEDHHLDSLSEHQLKELLATLDSKIGVADGMIQFMD 120
           Y+L +FFSDRKNKILT+TSKL HNV DH     SEHQL ELL  LDSKI VA+ MI+FM+
Sbjct: 89  YDLNRFFSDRKNKILTNTSKLLHNVVDHQ----SEHQLMELLDALDSKIRVANDMIEFME 148

Query: 121 ADYDHLIEQAFGMDTLPSETE-EPTTECDISEFLIEPDEF-EYNVEGFQSPLXXXXXXXX 180
           ADYDHLI+QA GMDT PS+TE E TT+ ++S+   EPDEF EYNVEGFQS L        
Sbjct: 149 ADYDHLIDQAIGMDTPPSQTEDEETTQFNVSDLFNEPDEFEEYNVEGFQSLL-------- 208

Query: 181 XXXXXXXXXXXLGTLVLNNP---FKFD 203
                      L TLV NNP   F FD
Sbjct: 209 -------EDKFLETLVQNNPIPDFDFD 213

[Close]
BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_023526169.1 (agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 180.3 bits (456), Expect = 6.8e-42
Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           MKKAYELSTLCDVQTCV IASD      F+TWP + +Q+ AMIRSYKS+SF KHS++ SS
Sbjct: 29  MKKAYELSTLCDVQTCVVIASD-----EFQTWPSDRNQVEAMIRSYKSQSFCKHSAK-SS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKIGVAD 120
           Y+L QFFSDRKNKI+T+TSKLR  V+       DH LDSLSEHQLK LLATLDSKIGVAD
Sbjct: 89  YDLNQFFSDRKNKIVTETSKLRDKVQKSKDTNSDHCLDSLSEHQLKVLLATLDSKIGVAD 148

Query: 121 GMIQFMDADYDHLIEQAFGMDTLPSETEEP 144
            MI+FM+ADYD+LIE A  + ++  +T  P
Sbjct: 149 SMIEFMEADYDYLIEGAVEISSIDKQTLSP 172

[Close]
BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_022934582.1 (agamous-like MADS-box protein AGL6 [Cucurbita moschata])

HSP 1 Score: 175.3 bits (443), Expect = 2.2e-40
Identity = 103/164 (62.80%), Postives = 122/164 (74.39%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFIASDCDPSTHFETWPPNHDQINAMIRSYKSRSFPKHSSRNSS 60
           MKKAYELSTLCDVQTCV IAS+      FETWP +  Q+ AMIRSYKS+SF K S++ SS
Sbjct: 29  MKKAYELSTLCDVQTCVVIASE-----EFETWPSDRTQVEAMIRSYKSQSFCKQSAK-SS 88

Query: 61  YNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATLDSKIGVAD 120
           Y+L QFFSDRKNKI+T+TSKLR  V+       DH LDSLSEHQLK L+ATLDSKIGVAD
Sbjct: 89  YDLNQFFSDRKNKIVTETSKLREKVQKSKDTNSDHCLDSLSEHQLKALMATLDSKIGVAD 148

Query: 121 GMIQFMDADYDHLIEQAFGMDTL------PSETEEPTTECDISE 152
            MI+FM+ADYD+LIE A  + ++      P ET E + E +ISE
Sbjct: 149 SMIEFMEADYDYLIEGAVEISSIDKQIFSPLET-EASPELNISE 185

[Close]
BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_022983430.1 (agamous-like MADS-box protein AGL14 [Cucurbita maxima])

HSP 1 Score: 104.8 bits (260), Expect = 3.6e-19
Identity = 67/148 (45.27%), Postives = 86/148 (58.11%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPPNHDQINAMIRSYKSRSFP 60
           MKKAYELSTLCDV+TCV I     A D DP   S  F TWP N  ++  MI +YK+ +  
Sbjct: 29  MKKAYELSTLCDVRTCVLINGPGFAPDEDPSLSSVEFHTWPSNRSEVEHMIHAYKNGNC- 88

Query: 61  KHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATL 120
            +  +   ++L  +FSDRK K++T+  K R  V        D  LD LSE QL+E +  L
Sbjct: 89  -NLQKRKCFDLSDYFSDRKRKLVTEMCKHREKVGKIMWPDWDERLDCLSEQQLREFMNGL 148

Query: 121 DSKIGVADGMIQFMDADYDHLIEQAFGM 134
           DS+I  A  MI FMDAD ++L    FGM
Sbjct: 149 DSRIEAAGRMIDFMDADNENL----FGM 170

[Close]
BLAST of Bhi01G001436 vs. NCBI nr
Match: XP_023528957.1 (agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 104.8 bits (260), Expect = 3.6e-19
Identity = 67/148 (45.27%), Postives = 86/148 (58.11%), Query Frame = 0 

Query: 1   MKKAYELSTLCDVQTCVFI-----ASDCDP---STHFETWPPNHDQINAMIRSYKSRSFP 60
           MKKAYELSTLCDV+TCV I     A D DP   S  F TWP N  ++  MI +YK+ +  
Sbjct: 29  MKKAYELSTLCDVRTCVLINGPGFAPDEDPSLSSVEFHTWPSNRSEVEHMIHAYKNGNC- 88

Query: 61  KHSSRNSSYNLKQFFSDRKNKILTDTSKLRHNVE-------DHHLDSLSEHQLKELLATL 120
            +  +   ++L  +FSDRK K++T+  K R  V        D  LD LSE QL+E +  L
Sbjct: 89  -NLQKRKCFDLSDYFSDRKRKLVTEMCKHREKVGKIMWPDWDERLDCLSEQQLREFMNGL 148

Query: 121 DSKIGVADGMIQFMDADYDHLIEQAFGM 134
           DS+I  A  MI FMDAD ++L    FGM
Sbjct: 149 DSRIEAAGRMIDFMDADNENL----FGM 170

The following BLAST results are available for this feature:
BLAST of Bhi01G001436 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58890.19.5e-0630.00AGAMOUS-like 82[more]
AT5G40220.16.2e-0528.91AGAMOUS-like 43[more]
AT5G39750.18.1e-0524.81AGAMOUS-like 81[more]
AT3G18650.11.1e-0429.66AGAMOUS-like 103[more]
AT5G41200.14.0e-0423.84AGAMOUS-like 75[more]
BLAST of Bhi01G001436 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FIM0|AGL82_ARATH1.7e-0430.00Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana OX=3702 GN=AGL82 PE=... [more]
BLAST of Bhi01G001436 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAL9|A0A0A0LAL9_CUCSA2.4e-5965.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258140 PE=4 SV=1[more]
tr|A0A1S3CDG6|A0A1S3CDG6_CUCME5.5e-1642.22MADS-box protein SOC1-like OS=Cucumis melo OX=3656 GN=LOC103499621 PE=4 SV=1[more]
tr|A0A0A0LME6|A0A0A0LME6_CUCSA7.2e-1635.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G336070 PE=4 SV=1[more]
tr|A0A2N9FVF0|A0A2N9FVF0_FAGSY1.2e-1034.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19065 PE=4 SV=1[more]
tr|M5X3X5|M5X3X5_PRUPE4.5e-1035.59Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G110900 PE=4 SV=1[more]
BLAST of Bhi01G001436 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145650.13.6e-5965.70PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus] >KGN57712.1 hypo... [more]
XP_023526169.16.8e-4266.00agamous-like MADS-box protein AGL6 [Cucurbita pepo subsp. pepo][more]
XP_022934582.12.2e-4062.80agamous-like MADS-box protein AGL6 [Cucurbita moschata][more]
XP_022983430.13.6e-1945.27agamous-like MADS-box protein AGL14 [Cucurbita maxima][more]
XP_023528957.13.6e-1945.27agamous-like MADS-box protein AGL14 [Cucurbita pepo subsp. pepo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR036879TF_MADSbox_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048481 plant ovule development
cellular_component GO:0005634 nucleus
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function GO:0008134 transcription factor binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001436Bhi01M001436mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 1..73
e-value: 1.0E-7
score: 33.8
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 1..57
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 1..23
e-value: 1.3E-6
score: 27.7
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..33
score: 8.578
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 1..119
NoneNo IPR availablePANTHERPTHR11945:SF176AGAMOUS-LIKE MADS-BOX PROTEIN AGL82coord: 1..119

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001436Cucumber (Gy14) v1cgywgoB005
Bhi01G001436Cucumber (Gy14) v2cgybwgoB259
Bhi01G001436Cucurbita maxima (Rimu)cmawgoB0319
Bhi01G001436Cucurbita maxima (Rimu)cmawgoB0562
Bhi01G001436Cucurbita moschata (Rifu)cmowgoB0307
Bhi01G001436Cucurbita moschata (Rifu)cmowgoB0559
Bhi01G001436Cucurbita pepo (Zucchini)cpewgoB0673
Bhi01G001436Cucurbita pepo (Zucchini)cpewgoB0773
Bhi01G001436Wild cucumber (PI 183967)cpiwgoB271
Bhi01G001436Cucumber (Chinese Long) v3cucwgoB274
Bhi01G001436Cucumber (Chinese Long) v2cuwgoB271
Bhi01G001436Bottle gourd (USVL1VR-Ls)lsiwgoB447
Bhi01G001436Melon (DHL92) v3.6.1medwgoB535
Bhi01G001436Melon (DHL92) v3.5.1mewgoB542
Bhi01G001436Watermelon (Charleston Gray)wcgwgoB441
Bhi01G001436Watermelon (97103) v2wgowmbB194
Bhi01G001436Watermelon (97103) v1wgowmB217
Bhi01G001436Silver-seed gourdcarwgoB0584
Bhi01G001436Silver-seed gourdcarwgoB0896