Bhi01G001412 (gene) Wax gourd

Overview
NameBhi01G001412
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionNADH-ubiquinone oxidoreductase chain 2
Locationchr1 : 40405538 .. 40405750 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGCATGCTCCGAAAGATAGGGTCGAGTCTGATACATCAACCATCTACTCAATATCCTTGTATGAGTCCACAATCACTACACGAGATGAACCTTGGTTTGGTGAATTGAAGTTGGCCTTAGGTGTAATAGGACTCCCAGTTACTGCGCGCGATCGTATACTGAGGTGCTCCCCGCCGGTTGTTAGAACGACGCGAGCCGGGCCTTGA

mRNA sequence

ATGGGAATGCATGCTCCGAAAGATAGGGTCGAGTCTGATACATCAACCATCTACTCAATATCCTTGTATGAGTCCACAATCACTACACGAGATGAACCTTGGTTTGGTGAATTGAAGTTGGCCTTAGGTGTAATAGGACTCCCAGTTACTGCGCGCGATCGTATACTGAGGTGCTCCCCGCCGGTTGTTAGAACGACGCGAGCCGGGCCTTGA

Coding sequence (CDS)

ATGGGAATGCATGCTCCGAAAGATAGGGTCGAGTCTGATACATCAACCATCTACTCAATATCCTTGTATGAGTCCACAATCACTACACGAGATGAACCTTGGTTTGGTGAATTGAAGTTGGCCTTAGGTGTAATAGGACTCCCAGTTACTGCGCGCGATCGTATACTGAGGTGCTCCCCGCCGGTTGTTAGAACGACGCGAGCCGGGCCTTGA

Protein sequence

MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSPPVVRTTRAGP
Homology
[Close]
BLAST of Bhi01G001412 vs. Swiss-Prot
Match: sp|P15688|NU2M_BETVU (NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris OX=161934 GN=ND2 PE=3 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 4.1e-22
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0 

Query: 16  TIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSPPVVRTTRAGP 71
           ++YSISLYESTITTRDEPWFGE +LALGVIGLPVTA DRILRCSPPVV TTRAGP
Sbjct: 455 SVYSISLYESTITTRDEPWFGEFELALGVIGLPVTAHDRILRCSPPVVGTTRAGP 509

[Close]
BLAST of Bhi01G001412 vs. TrEMBL
Match: tr|A5AFS5|A5AFS5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004351 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-30
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1   MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
           MGMHA KDRVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 207 MGMHATKDRVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 266

Query: 61  PVVRTTRAGP 71
           PVV TTRAGP
Sbjct: 267 PVVGTTRAGP 276

[Close]
BLAST of Bhi01G001412 vs. TrEMBL
Match: tr|M1BVN5|M1BVN5_SOLTU (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.8e-30
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
          MGMHA KDRVESDTST+YSISLYEST+TTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 1  MGMHATKDRVESDTSTVYSISLYESTMTTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60

Query: 61 PVVRTTRAGP 71
          PVV TTRAGP
Sbjct: 61 PVVGTTRAGP 70

[Close]
BLAST of Bhi01G001412 vs. TrEMBL
Match: tr|A0A2H5QSQ3|A0A2H5QSQ3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_257950 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.8e-30
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
          MGMHA KDRVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 1  MGMHATKDRVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60

Query: 61 PVVRTTRAGP 71
          P+V TT+AGP
Sbjct: 61 PIVETTQAGP 70

[Close]
BLAST of Bhi01G001412 vs. TrEMBL
Match: tr|A0A200Q467|A0A200Q467_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_6935g6 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
          MGMHA K+RVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 1  MGMHATKERVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60

Query: 61 PVVRTTRAGP 71
          PVV TTRAGP
Sbjct: 61 PVVGTTRAGP 70

[Close]
BLAST of Bhi01G001412 vs. TrEMBL
Match: tr|A0A0D2NAB2|A0A0D2NAB2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G164600 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-29
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1   MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
           MGMHA KDRVESDTST+YSISL+ESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 293 MGMHATKDRVESDTSTVYSISLFESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 352

Query: 61  PVVRTTRAGP 71
           PVV TTRAGP
Sbjct: 353 PVVGTTRAGP 362

[Close]
BLAST of Bhi01G001412 vs. NCBI nr
Match: CAN64512.1 (hypothetical protein VITISV_004351 [Vitis vinifera])

HSP 1 Score: 139.0 bits (349), Expect = 6.0e-30
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1   MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
           MGMHA KDRVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 207 MGMHATKDRVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 266

Query: 61  PVVRTTRAGP 71
           PVV TTRAGP
Sbjct: 267 PVVGTTRAGP 276

[Close]
BLAST of Bhi01G001412 vs. NCBI nr
Match: GAY67613.1 (hypothetical protein CUMW_257950 [Citrus unshiu])

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-29
Identity = 65/70 (92.86%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
          MGMHA KDRVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 1  MGMHATKDRVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60

Query: 61 PVVRTTRAGP 71
          P+V TT+AGP
Sbjct: 61 PIVETTQAGP 70

[Close]
BLAST of Bhi01G001412 vs. NCBI nr
Match: KJB09778.1 (hypothetical protein B456_001G164600 [Gossypium raimondii])

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1   MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
           MGMHA KDRVESDTST+YSISL+ESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 293 MGMHATKDRVESDTSTVYSISLFESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 352

Query: 61  PVVRTTRAGP 71
           PVV TTRAGP
Sbjct: 353 PVVGTTRAGP 362

[Close]
BLAST of Bhi01G001412 vs. NCBI nr
Match: OVA05263.1 (hypothetical protein BVC80_6935g6 [Macleaya cordata])

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 0 

Query: 1  MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
          MGMHA K+RVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP
Sbjct: 1  MGMHATKERVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60

Query: 61 PVVRTTRAGP 71
          PVV TTRAGP
Sbjct: 61 PVVGTTRAGP 70

[Close]
BLAST of Bhi01G001412 vs. NCBI nr
Match: PLY88373.1 (hypothetical protein LSAT_5X28181 [Lactuca sativa])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-29
Identity = 64/70 (91.43%), Postives = 67/70 (95.71%), Query Frame = 0 

Query: 1  MGMHAPKDRVESDTSTIYSISLYESTITTRDEPWFGELKLALGVIGLPVTARDRILRCSP 60
          MGMHA K+RVESDTST+YSISLYESTITTRDEPWFGELKLALGVIGLPVT RDR+LRCSP
Sbjct: 1  MGMHATKERVESDTSTVYSISLYESTITTRDEPWFGELKLALGVIGLPVTVRDRLLRCSP 60

Query: 61 PVVRTTRAGP 71
          PVV TTRAGP
Sbjct: 61 PVVGTTRAGP 70

The following BLAST results are available for this feature:
BLAST of Bhi01G001412 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G001412 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P15688|NU2M_BETVU4.1e-2289.09NADH-ubiquinone oxidoreductase chain 2 OS=Beta vulgaris OX=161934 GN=ND2 PE=3 SV... [more]
BLAST of Bhi01G001412 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A5AFS5|A5AFS5_VITVI3.9e-3095.71Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004351 PE=4 SV=1[more]
tr|M1BVN5|M1BVN5_SOLTU8.8e-3094.29Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1[more]
tr|A0A2H5QSQ3|A0A2H5QSQ3_CITUN8.8e-3092.86Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_257950 PE=4 SV=1[more]
tr|A0A200Q467|A0A200Q467_9MAGN1.1e-2994.29Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_6935g6 PE=4 SV=1[more]
tr|A0A0D2NAB2|A0A0D2NAB2_GOSRA1.1e-2994.29Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G164600 PE=4 ... [more]
BLAST of Bhi01G001412 vs. NCBI nr
Match NameE-valueIdentityDescription
CAN64512.16.0e-3095.71hypothetical protein VITISV_004351 [Vitis vinifera][more]
GAY67613.11.3e-2992.86hypothetical protein CUMW_257950 [Citrus unshiu][more]
KJB09778.11.7e-2994.29hypothetical protein B456_001G164600 [Gossypium raimondii][more]
OVA05263.11.7e-2994.29hypothetical protein BVC80_6935g6 [Macleaya cordata][more]
PLY88373.18.6e-2991.43hypothetical protein LSAT_5X28181 [Lactuca sativa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respiratory chain
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001412Bhi01M001412mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001412Cucurbita maxima (Rimu)cmawgoB0319
Bhi01G001412Cucurbita moschata (Rifu)cmowgoB0307
Bhi01G001412Cucurbita pepo (Zucchini)cpewgoB0773
Bhi01G001412Bottle gourd (USVL1VR-Ls)lsiwgoB447
Bhi01G001412Watermelon (97103) v2wgowmbB194
Bhi01G001412Silver-seed gourdcarwgoB0584