Bhi01G001408 (gene) Wax gourd

Overview
NameBhi01G001408
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 40393379 .. 40393666 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCCGGTGCGTGGCGAACGGAACGGTTCATCAAGCCATTTCTCGCCTCAACCCCCTAATAGGAAGAGGGGTACTTTACAAATAGGGGGTAATTCGCACCTGACTGTGATAGCCCTCTCGATACCTTATGTTCGCTTTGTTACTAGTGGCCGATTTCCCCGTCGCGTTAGCGTTTTCCCAGTGCGCGAAGCCCCAACGAGGAAGATGTTAGTGGTTTCTCATTGGGTCAATAATCCAAATCCCTCTTTTTGTGCTACTCCTACTCCTAGAGCGGGAAAAAGATAA

mRNA sequence

ATGGGGCCGGTGCGTGGCGAACGGAACGGTTCATCAAGCCATTTCTCGCCTCAACCCCCTAATAGGAAGAGGGGTACTTTACAAATAGGGGGTAATTCGCACCTGACTGTGATAGCCCTCTCGATACCTTATGTTCGCTTTGTTACTAGTGGCCGATTTCCCCGTCGCGTTAGCGTTTTCCCAGTGCGCGAAGCCCCAACGAGGAAGATGTTAGTGGTTTCTCATTGGGTCAATAATCCAAATCCCTCTTTTTGTGCTACTCCTACTCCTAGAGCGGGAAAAAGATAA

Coding sequence (CDS)

ATGGGGCCGGTGCGTGGCGAACGGAACGGTTCATCAAGCCATTTCTCGCCTCAACCCCCTAATAGGAAGAGGGGTACTTTACAAATAGGGGGTAATTCGCACCTGACTGTGATAGCCCTCTCGATACCTTATGTTCGCTTTGTTACTAGTGGCCGATTTCCCCGTCGCGTTAGCGTTTTCCCAGTGCGCGAAGCCCCAACGAGGAAGATGTTAGTGGTTTCTCATTGGGTCAATAATCCAAATCCCTCTTTTTGTGCTACTCCTACTCCTAGAGCGGGAAAAAGATAA

Protein sequence

MGPVRGERNGSSSHFSPQPPNRKRGTLQIGGNSHLTVIALSIPYVRFVTSGRFPRRVSVFPVREAPTRKMLVVSHWVNNPNPSFCATPTPRAGKR
Homology
[Close]
BLAST of Bhi01G001408 vs. TrEMBL
Match: tr|A0A2K3NKI7|A0A2K3NKI7_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g026909 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.9e-07
Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1  MGPVRGERNGSSSHFSPQPP--NRKRGTLQIGGN 33
          MGPVRGERNGSSSHFSPQPP  NRKRGTLQ GGN
Sbjct: 1  MGPVRGERNGSSSHFSPQPPKLNRKRGTLQKGGN 34

[Close]
BLAST of Bhi01G001408 vs. NCBI nr
Match: PNY03576.1 (hypothetical protein L195_g026909, partial [Trifolium pratense])

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-07
Identity = 31/34 (91.18%), Postives = 31/34 (91.18%), Query Frame = 0 

Query: 1  MGPVRGERNGSSSHFSPQPP--NRKRGTLQIGGN 33
          MGPVRGERNGSSSHFSPQPP  NRKRGTLQ GGN
Sbjct: 1  MGPVRGERNGSSSHFSPQPPKLNRKRGTLQKGGN 34

The following BLAST results are available for this feature:
BLAST of Bhi01G001408 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G001408 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G001408 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2K3NKI7|A0A2K3NKI7_TRIPR4.9e-0791.18Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g02690... [more]
BLAST of Bhi01G001408 vs. NCBI nr
Match NameE-valueIdentityDescription
PNY03576.17.4e-0791.18hypothetical protein L195_g026909, partial [Trifolium pratense][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001408Bhi01M001408mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001408Cucurbita maxima (Rimu)cmawgoB0111
Bhi01G001408Cucurbita maxima (Rimu)cmawgoB0319
Bhi01G001408Cucurbita moschata (Rifu)cmowgoB0307
Bhi01G001408Cucurbita pepo (Zucchini)cpewgoB0773
Bhi01G001408Bottle gourd (USVL1VR-Ls)lsiwgoB447
Bhi01G001408Watermelon (97103) v2wgowmbB194
Bhi01G001408Silver-seed gourdcarwgoB0584