Bhi01G001406 (gene) Wax gourd

Overview
NameBhi01G001406
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionATP synthase subunit a
Locationchr1 : 40385360 .. 40385818 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAATTGATTCCAGTGTCGCAGAGAACATTATGTCTCGCGATCTGGAAATATCTGCGGAGATGGATACTGAACCCCTCCGCGGATGGGTGGAGGAGAGAAAGAAGAACCCTAATCTCTTAAAATCCCTCATTAGGGAGTCTGTCGCTTTCTTTCATAACAGAGCCGAGAATAACAGCTGGCATAGTTGTCTCTCGCATGCAAGCAAGGAGATGCTGCTGCTGGATGTCACGGTTCTGGGGCGCCATGATCCTTTTCTCTGGAACAATCGAGGGCACTGCCTTCCTTCCGCTTTCAGAGGTAGGGACTTCATCAATCATCGCTCAGTGAGCTATTTATTGCCGCCCATAGCGCTTCACTTGCACGGCAGCGCCACGCCTGGTAGAGCTATCGCGCGCGGGCGAAGGAGATGCATTTTTTGTACTGGTAGTACTGGACAAGCTCAGAGGGAATAA

mRNA sequence

ATGGCAGAAATTGATTCCAGTGTCGCAGAGAACATTATGTCTCGCGATCTGGAAATATCTGCGGAGATGGATACTGAACCCCTCCGCGGATGGGTGGAGGAGAGAAAGAAGAACCCTAATCTCTTAAAATCCCTCATTAGGGAGTCTGTCGCTTTCTTTCATAACAGAGCCGAGAATAACAGCTGGCATAGTTGTCTCTCGCATGCAAGCAAGGAGATGCTGCTGCTGGATGTCACGGTTCTGGGGCGCCATGATCCTTTTCTCTGGAACAATCGAGGGCACTGCCTTCCTTCCGCTTTCAGAGGTAGGGACTTCATCAATCATCGCTCAGTGAGCTATTTATTGCCGCCCATAGCGCTTCACTTGCACGGCAGCGCCACGCCTGGTAGAGCTATCGCGCGCGGGCGAAGGAGATGCATTTTTTGTACTGGTAGTACTGGACAAGCTCAGAGGGAATAA

Coding sequence (CDS)

ATGGCAGAAATTGATTCCAGTGTCGCAGAGAACATTATGTCTCGCGATCTGGAAATATCTGCGGAGATGGATACTGAACCCCTCCGCGGATGGGTGGAGGAGAGAAAGAAGAACCCTAATCTCTTAAAATCCCTCATTAGGGAGTCTGTCGCTTTCTTTCATAACAGAGCCGAGAATAACAGCTGGCATAGTTGTCTCTCGCATGCAAGCAAGGAGATGCTGCTGCTGGATGTCACGGTTCTGGGGCGCCATGATCCTTTTCTCTGGAACAATCGAGGGCACTGCCTTCCTTCCGCTTTCAGAGGTAGGGACTTCATCAATCATCGCTCAGTGAGCTATTTATTGCCGCCCATAGCGCTTCACTTGCACGGCAGCGCCACGCCTGGTAGAGCTATCGCGCGCGGGCGAAGGAGATGCATTTTTTGTACTGGTAGTACTGGACAAGCTCAGAGGGAATAA

Protein sequence

MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRESVAFFHNRAENNSWHSCLSHASKEMLLLDVTVLGRHDPFLWNNRGHCLPSAFRGRDFINHRSVSYLLPPIALHLHGSATPGRAIARGRRRCIFCTGSTGQAQRE
Homology
[Close]
BLAST of Bhi01G001406 vs. TrEMBL
Match: tr|A0A2N9J977|A0A2N9J977_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61714 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.3e-13
Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 1   MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
           MAEI SSVAENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKSLIRE
Sbjct: 75  MAEIYSSVAENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSLIRE 122

[Close]
BLAST of Bhi01G001406 vs. TrEMBL
Match: tr|A0A2I0HZ50|A0A2I0HZ50_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042616 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.3e-13
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          MA +DSSVAENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKS+IRE
Sbjct: 1  MAPVDSSVAENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSIIRE 48

[Close]
BLAST of Bhi01G001406 vs. TrEMBL
Match: tr|W9QM76|W9QM76_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007585 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.6e-12
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          MA+I SSV ENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKSLIRE
Sbjct: 1  MAKIYSSVVENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSLIRE 48

[Close]
BLAST of Bhi01G001406 vs. TrEMBL
Match: tr|A0A1C9I9S8|A0A1C9I9S8_COCAP (ATP synthase subunit a OS=Corchorus capsularis OX=210143 GN=atp6 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.9e-09
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 1   MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPN 41
           MAE DSS AENIMSRDLEISAEMDTE LRGWVEE+K+NPN
Sbjct: 301 MAERDSSAAENIMSRDLEISAEMDTETLRGWVEEKKENPN 340

[Close]
BLAST of Bhi01G001406 vs. TrEMBL
Match: tr|A0A2K3LUV7|A0A2K3LUV7_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g038350 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          M +I SSVAENIMSRDL+ISAE+  E LRGWVEE K+NPN LKSLIRE
Sbjct: 1  MEKIYSSVAENIMSRDLKISAEIYIETLRGWVEEIKENPNPLKSLIRE 48

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: PKI36994.1 (hypothetical protein CRG98_042616 [Punica granatum])

HSP 1 Score: 83.6 bits (205), Expect = 6.5e-13
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          MA +DSSVAENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKS+IRE
Sbjct: 1  MAPVDSSVAENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSIIRE 48

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: EXB41435.1 (hypothetical protein L484_007585 [Morus notabilis])

HSP 1 Score: 80.5 bits (197), Expect = 5.5e-12
Identity = 42/48 (87.50%), Postives = 44/48 (91.67%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          MA+I SSV ENIMSRDLEISAEMDTE LRGWVEE K+NPNLLKSLIRE
Sbjct: 1  MAKIYSSVVENIMSRDLEISAEMDTETLRGWVEEIKENPNLLKSLIRE 48

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: YP_009306110.1 (ATP synthase subunit 6 (mitochondrion) [Corchorus capsularis] >AOO95947.1 ATP synthase subunit 6 (mitochondrion) [Corchorus capsularis])

HSP 1 Score: 70.9 bits (172), Expect = 4.3e-09
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 0 

Query: 1   MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPN 41
           MAE DSS AENIMSRDLEISAEMDTE LRGWVEE+K+NPN
Sbjct: 301 MAERDSSAAENIMSRDLEISAEMDTETLRGWVEEKKENPN 340

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: GAU19216.1 (hypothetical protein TSUD_198980 [Trifolium subterraneum])

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          M +I SSVAENIMSRDL+ISAE+  E LRGWVEE K+NPN LKSLIRE
Sbjct: 1  MVKIYSSVAENIMSRDLKISAEIYIETLRGWVEEIKENPNPLKSLIRE 48

[Close]
BLAST of Bhi01G001406 vs. NCBI nr
Match: PNX82321.1 (hypothetical protein L195_g038350, partial [Trifolium pratense])

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 1  MAEIDSSVAENIMSRDLEISAEMDTEPLRGWVEERKKNPNLLKSLIRE 49
          M +I SSVAENIMSRDL+ISAE+  E LRGWVEE K+NPN LKSLIRE
Sbjct: 1  MEKIYSSVAENIMSRDLKISAEIYIETLRGWVEEIKENPNPLKSLIRE 48

The following BLAST results are available for this feature:
BLAST of Bhi01G001406 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G001406 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G001406 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9J977|A0A2N9J977_FAGSY4.3e-1391.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61714 PE=4 SV=1[more]
tr|A0A2I0HZ50|A0A2I0HZ50_PUNGR4.3e-1387.50Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042616 PE=4 SV=1[more]
tr|W9QM76|W9QM76_9ROSA3.6e-1287.50Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007585 PE=4 SV=1[more]
tr|A0A1C9I9S8|A0A1C9I9S8_COCAP2.9e-0987.50ATP synthase subunit a OS=Corchorus capsularis OX=210143 GN=atp6 PE=3 SV=1[more]
tr|A0A2K3LUV7|A0A2K3LUV7_TRIPR1.4e-0877.08Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g03835... [more]
BLAST of Bhi01G001406 vs. NCBI nr
Match NameE-valueIdentityDescription
PKI36994.16.5e-1387.50hypothetical protein CRG98_042616 [Punica granatum][more]
EXB41435.15.5e-1287.50hypothetical protein L484_007585 [Morus notabilis][more]
YP_009306110.14.3e-0987.50ATP synthase subunit 6 (mitochondrion) [Corchorus capsularis] >AOO95947.1 ATP sy... [more]
GAU19216.11.6e-0877.08hypothetical protein TSUD_198980 [Trifolium subterraneum][more]
PNX82321.12.2e-0877.08hypothetical protein L195_g038350, partial [Trifolium pratense][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0051287 NAD binding
molecular_function GO:0016651 oxidoreductase activity, acting on NAD(P)H
molecular_function GO:0048038 quinone binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001406Bhi01M001406mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001406Cucurbita maxima (Rimu)cmawgoB0111
Bhi01G001406Cucurbita maxima (Rimu)cmawgoB0319
Bhi01G001406Cucurbita moschata (Rifu)cmowgoB0307
Bhi01G001406Cucurbita pepo (Zucchini)cpewgoB0773
Bhi01G001406Bottle gourd (USVL1VR-Ls)lsiwgoB447
Bhi01G001406Watermelon (97103) v2wgowmbB194
Bhi01G001406Silver-seed gourdcarwgoB0584