Bhi01G001208 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G001208
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr1 : 33531763 .. 33532011 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGTCATTTAAATCAGGAAGTTGCTATAGGAACTAGTGATGGACAGGATAATCCTGTGAAAAGTTTCGAGATTGAATTCTTGAAAGCATTGAGAGCAACAGTTTTCACTAGAGCAATTGATTCTATGGATGCAATAATCTGGTTAGCCAAGTTAAGAGAATGCTTCAGAATGACGAACTGTCCTACCCACAAAAGAGTAAAACTTGCTACATCCTTGTTTCAAGGTGAAGCTGAGAACTTATGA

mRNA sequence

ATGAAGGGTCATTTAAATCAGGAAGTTGCTATAGGAACTAGTGATGGACAGGATAATCCTGTGAAAAGTTTCGAGATTGAATTCTTGAAAGCATTGAGAGCAACAGTTTTCACTAGAGCAATTGATTCTATGGATGCAATAATCTGGTTAGCCAAGTTAAGAGAATGCTTCAGAATGACGAACTGTCCTACCCACAAAAGAGTAAAACTTGCTACATCCTTGTTTCAAGGTGAAGCTGAGAACTTATGA

Coding sequence (CDS)

ATGAAGGGTCATTTAAATCAGGAAGTTGCTATAGGAACTAGTGATGGACAGGATAATCCTGTGAAAAGTTTCGAGATTGAATTCTTGAAAGCATTGAGAGCAACAGTTTTCACTAGAGCAATTGATTCTATGGATGCAATAATCTGGTTAGCCAAGTTAAGAGAATGCTTCAGAATGACGAACTGTCCTACCCACAAAAGAGTAAAACTTGCTACATCCTTGTTTCAAGGTGAAGCTGAGAACTTATGA

Protein sequence

MKGHLNQEVAIGTSDGQDNPVKSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAENL

Homology

[Close]

BLAST of Bhi01G001208 vs. TrEMBL
Match: tr|A0A1S3BJ07|A0A1S3BJ07_CUCME (uncharacterized protein LOC103490604 OS=Cucumis melo OX=3656 GN=LOC103490604 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-07
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 7   QEVAIGTSDGQDNPVKSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHK 66
           QE+      G  +P K + IE LK L ATVF  + D  +A +WL  L +CF + NCP  +
Sbjct: 47  QEIGRPERVGPSDPEKMYGIERLKKLGATVFEGSTDPANAEVWLNMLEKCFDVMNCPQKR 106

Query: 67  RVKLATSLFQGEAE 81
           +V+L T L Q EAE
Sbjct: 107 KVRLTTFLLQKEAE 120

[Close]

BLAST of Bhi01G001208 vs. TrEMBL
Match: tr|A0A1S4E079|A0A1S4E079_CUCME (uncharacterized protein LOC107991239 OS=Cucumis melo OX=3656 GN=LOC107991239 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 24 FEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAE 81
          + IE LK LRATVF  + D  DA +WL  L +CF + +CP  ++V+LAT L Q EAE
Sbjct: 2  YGIERLKKLRATVFEGSTDPADAEVWLNMLEKCFDVMSCPQERKVRLATFLLQKEAE 58

[Close]

BLAST of Bhi01G001208 vs. TrEMBL
Match: tr|A0A1S4DXX0|A0A1S4DXX0_CUCME (uncharacterized protein LOC107991043 OS=Cucumis melo OX=3656 GN=LOC107991043 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.7e-06
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 19  NPVKSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGE 78
           +P K++ IE LK L ATVF  +ID  D   WL  L +CF + NCP  ++V+LAT L Q E
Sbjct: 64  DPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVMNCPEERKVRLATFLSQKE 123

Query: 79  AE 81
            E
Sbjct: 124 DE 125

[Close]

BLAST of Bhi01G001208 vs. TrEMBL
Match: tr|A0A1S4DV40|A0A1S4DV40_CUCME (uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.1e-06
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 22  KSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAE 81
           K + IE LK L ATVF  + D  DA +WL  L +CF + +CP  ++V+LAT L Q EAE
Sbjct: 62  KMYGIEQLKKLGATVFQGSTDPADAEVWLNMLEKCFDVMSCPQEQKVRLATFLLQKEAE 120

[Close]

BLAST of Bhi01G001208 vs. TrEMBL
Match: tr|A0A1S3C3Q7|A0A1S3C3Q7_CUCME (uncharacterized protein LOC103496653 OS=Cucumis melo OX=3656 GN=LOC103496653 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.2e-05
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 24 FEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAE 81
          + IE LK L ATVF  + D  DA  WL  L +CF + +CP  ++V+LAT L Q EAE
Sbjct: 2  YGIERLKKLGATVFEGSTDLADADAWLNMLEKCFDVMSCPQERKVRLATFLLQKEAE 58

[Close]

BLAST of Bhi01G001208 vs. NCBI nr
Match: XP_008448403.1 (PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo])

HSP 1 Score: 63.2 bits (152), Expect = 4.9e-07
Identity = 32/74 (43.24%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 7   QEVAIGTSDGQDNPVKSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHK 66
           QE+      G  +P K + IE LK L ATVF  + D  +A +WL  L +CF + NCP  +
Sbjct: 47  QEIGRPERVGPSDPEKMYGIERLKKLGATVFEGSTDPANAEVWLNMLEKCFDVMNCPQKR 106

Query: 67  RVKLATSLFQGEAE 81
           +V+L T L Q EAE
Sbjct: 107 KVRLTTFLLQKEAE 120

[Close]

BLAST of Bhi01G001208 vs. NCBI nr
Match: XP_016901385.1 (PREDICTED: uncharacterized protein LOC107991239 [Cucumis melo])

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 24 FEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAE 81
          + IE LK LRATVF  + D  DA +WL  L +CF + +CP  ++V+LAT L Q EAE
Sbjct: 2  YGIERLKKLRATVFEGSTDPADAEVWLNMLEKCFDVMSCPQERKVRLATFLLQKEAE 58

[Close]

BLAST of Bhi01G001208 vs. NCBI nr
Match: XP_016900827.1 (PREDICTED: uncharacterized protein LOC107991043 [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 7.0e-06
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 19  NPVKSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGE 78
           +P K++ IE LK L ATVF  +ID  D   WL  L +CF + NCP  ++V+LAT L Q E
Sbjct: 64  DPEKAYGIERLKKLGATVFEGSIDPADVENWLNMLEKCFDVMNCPEERKVRLATFLSQKE 123

Query: 79  AE 81
            E
Sbjct: 124 DE 125

[Close]

BLAST of Bhi01G001208 vs. NCBI nr
Match: XP_016899851.1 (PREDICTED: uncharacterized protein LOC103487680 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 9.2e-06
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 22  KSFEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAE 81
           K + IE LK L ATVF  + D  DA +WL  L +CF + +CP  ++V+LAT L Q EAE
Sbjct: 62  KMYGIEQLKKLGATVFQGSTDPADAEVWLNMLEKCFDVMSCPQEQKVRLATFLLQKEAE 120

[Close]

BLAST of Bhi01G001208 vs. NCBI nr
Match: XP_008456815.1 (PREDICTED: uncharacterized protein LOC103496653 [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 7.8e-05
Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 24 FEIEFLKALRATVFTRAIDSMDAIIWLAKLRECFRMTNCPTHKRVKLATSLFQGEAE 81
          + IE LK L ATVF  + D  DA  WL  L +CF + +CP  ++V+LAT L Q EAE
Sbjct: 2  YGIERLKKLGATVFEGSTDLADADAWLNMLEKCFDVMSCPQERKVRLATFLLQKEAE 58

The following BLAST results are available for this feature:

BLAST of Bhi01G001208 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G001208 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G001208 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJ07\|A0A1S3BJ07_CUCME	3.2e-07	43.24	uncharacterized protein LOC103490604 OS=Cucumis melo OX=3656 GN=LOC103490604 PE=...	[more]
tr\|A0A1S4E079\|A0A1S4E079_CUCME	2.1e-06	50.88	uncharacterized protein LOC107991239 OS=Cucumis melo OX=3656 GN=LOC107991239 PE=...	[more]
tr\|A0A1S4DXX0\|A0A1S4DXX0_CUCME	4.7e-06	48.39	uncharacterized protein LOC107991043 OS=Cucumis melo OX=3656 GN=LOC107991043 PE=...	[more]
tr\|A0A1S4DV40\|A0A1S4DV40_CUCME	6.1e-06	49.15	uncharacterized protein LOC103487680 OS=Cucumis melo OX=3656 GN=LOC103487680 PE=...	[more]
tr\|A0A1S3C3Q7\|A0A1S3C3Q7_CUCME	5.2e-05	49.12	uncharacterized protein LOC103496653 OS=Cucumis melo OX=3656 GN=LOC103496653 PE=...	[more]

BLAST of Bhi01G001208 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448403.1	4.9e-07	43.24	PREDICTED: uncharacterized protein LOC103490604 [Cucumis melo]	[more]
XP_016901385.1	3.2e-06	50.88	PREDICTED: uncharacterized protein LOC107991239 [Cucumis melo]	[more]
XP_016900827.1	7.0e-06	48.39	PREDICTED: uncharacterized protein LOC107991043 [Cucumis melo]	[more]
XP_016899851.1	9.2e-06	49.15	PREDICTED: uncharacterized protein LOC103487680 [Cucumis melo]	[more]
XP_008456815.1	7.8e-05	49.12	PREDICTED: uncharacterized protein LOC103496653 [Cucumis melo]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M001208	Bhi01M001208	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G001208	Cucumber (Gy14) v1	cgywgoB003
Bhi01G001208	Cucumber (Gy14) v2	cgybwgoB271
Bhi01G001208	Cucurbita maxima (Rimu)	cmawgoB0438
Bhi01G001208	Cucurbita maxima (Rimu)	cmawgoB0852
Bhi01G001208	Cucurbita moschata (Rifu)	cmowgoB0434
Bhi01G001208	Cucurbita moschata (Rifu)	cmowgoB0849
Bhi01G001208	Cucurbita pepo (Zucchini)	cpewgoB0295
Bhi01G001208	Cucurbita pepo (Zucchini)	cpewgoB0517
Bhi01G001208	Wild cucumber (PI 183967)	cpiwgoB283
Bhi01G001208	Cucumber (Chinese Long) v3	cucwgoB287
Bhi01G001208	Cucumber (Chinese Long) v2	cuwgoB283
Bhi01G001208	Bottle gourd (USVL1VR-Ls)	lsiwgoB431
Bhi01G001208	Melon (DHL92) v3.6.1	medwgoB531
Bhi01G001208	Melon (DHL92) v3.5.1	mewgoB530
Bhi01G001208	Watermelon (Charleston Gray)	wcgwgoB427
Bhi01G001208	Watermelon (97103) v2	wgowmbB179
Bhi01G001208	Watermelon (97103) v1	wgowmB202
Bhi01G001208	Silver-seed gourd	carwgoB0075
Bhi01G001208	Silver-seed gourd	carwgoB0771