Bhi01G001163 (gene) Wax gourd

Overview
NameBhi01G001163
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr1 : 31805676 .. 31806020 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTATGTGTGATAGCATCTACTATACCAGGAATATCAATGAACTCGATTATTGAAATTGCTCAGGATACCCATTTTTAGTTTAGCTGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCATGGTTTAAAAATGCCGAATCTTGTCTCATGTCAGGACTATTCGGAGTAAGTTCCTTGGCTTGGACAGGACATTTAGTCCATGTCGCTATTCCTGCATCCAGGAGAGAATATGCTACGACATGTGTTCTCCTGTCGTCATCTTATTAGTCGGTATCTCCACTAGCTGTAGGGCGAAGCAAGGCATTCAGCTAAGAGCTGCTAGCAGCAACTAG

mRNA sequence

ATGATTCTGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCATGGTTTAAAAATGCCGAATCTTGTCTCATGTCAGGACTATTCGGAGACATTTAGTCCATGTCGCTATTCCTGCATCCAGGAGAGAATATGCTACGACATGTGTTCTCCTGTCGTCATCTTATTAGTCGGTATCTCCACTAGCTGTAGGGCGAAGCAAGGCATTCAGCTAAGAGCTGCTAGCAGCAACTAG

Coding sequence (CDS)

ATGATTCTGGTTGGTTACACCTACAACCGAAATGGAAACCGAGCGTTTCATGGTTTAAAAATGCCGAATCTTGTCTCATGTCAGGACTATTCGGAGACATTTAGTCCATGTCGCTATTCCTGCATCCAGGAGAGAATATGCTACGACATGTGTTCTCCTGTCGTCATCTTATTAGTCGGTATCTCCACTAGCTGTAGGGCGAAGCAAGGCATTCAGCTAAGAGCTGCTAGCAGCAACTAG

Protein sequence

MILVGYTYNRNGNRAFHGLKMPNLVSCQDYSETFSPCRYSCIQERICYDMCSPVVILLVGISTSCRAKQGIQLRAASSN
Homology
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BLAST of Bhi01G001163 vs. TrEMBL
Match: tr|J3MVW5|J3MVW5_ORYBR (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-04
Identity = 27/41 (65.85%), Postives = 28/41 (68.29%), Query Frame = 0 

Query: 5   GYTYNRNGNRAFHGLKMPNLVS---CQDYSETFSPCRYSCI 43
           GY YN NGN AFHG KM NLVS   CQD+   FS CRYS I
Sbjct: 374 GYIYNPNGNPAFHGSKMRNLVSIIICQDFLGIFSSCRYSSI 414

The following BLAST results are available for this feature:
BLAST of Bhi01G001163 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi01G001163 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G001163 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|J3MVW5|J3MVW5_ORYBR1.4e-0465.85Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=3 SV=1[more]
BLAST of Bhi01G001163 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M001163Bhi01M001163mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G001163Cucumber (Gy14) v1cgywgoB003
Bhi01G001163Cucumber (Gy14) v2cgybwgoB271
Bhi01G001163Cucurbita maxima (Rimu)cmawgoB0438
Bhi01G001163Cucurbita maxima (Rimu)cmawgoB0852
Bhi01G001163Cucurbita moschata (Rifu)cmowgoB0434
Bhi01G001163Cucurbita moschata (Rifu)cmowgoB0849
Bhi01G001163Cucurbita pepo (Zucchini)cpewgoB0295
Bhi01G001163Cucurbita pepo (Zucchini)cpewgoB0517
Bhi01G001163Wild cucumber (PI 183967)cpiwgoB283
Bhi01G001163Cucumber (Chinese Long) v3cucwgoB287
Bhi01G001163Cucumber (Chinese Long) v2cuwgoB283
Bhi01G001163Bottle gourd (USVL1VR-Ls)lsiwgoB431
Bhi01G001163Melon (DHL92) v3.6.1medwgoB531
Bhi01G001163Melon (DHL92) v3.5.1mewgoB530
Bhi01G001163Watermelon (Charleston Gray)wcgwgoB427
Bhi01G001163Watermelon (97103) v2wgowmbB179
Bhi01G001163Watermelon (97103) v1wgowmB202
Bhi01G001163Silver-seed gourdcarwgoB0050
Bhi01G001163Silver-seed gourdcarwgoB0771