Bhi01G000827 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000827
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Gag-pro-like protein
Location	chr1 : 22102390 .. 22102884 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCAAAGACAATGATAAGGAGTGGTTATCATATACATGGAGGTTTGGGAAAGCATAATCAAGGAAGTTCAGAAGTGATTTCTCTTCCTAAGGCAAAGGAAAGATTTGGATTGGGGTATAAGCCGACAACTTCTGAATGGGAGAAGGTTCGAGCAGAGAAAAAGGAAAATAGAAGTGCACGTCTCGAAGGATATAAGGTTGGACCAGGTAGAATGCATATACCTTAACTGTCTTAAACTTTCAAGCCAAGGGAATTACTTTTCAACAATAAGCAGCCAAGGGAATGCACCAAGGGATTTGAGGCCGCAGTTACTGTTATCCCTAAAAACACTCATTCATCTTGTCAATTGGTTTATCCTTGTCCGCCAGAATTTGAGCTGAACAATTGGGAGATCAAGAAGATGTCAAGCATCACTAAAGGATTGCCAAAGAAATTATGTTTGTTATGCACCCTATGGCTATGCCTAAGGCCACAAGGAGTCCTTTGTTAA

mRNA sequence

ATGATTGCAAAGACAATGATAAGGAGTGGTTATCATATACATGGAGGTTTGGGAAAGCATAATCAAGGAAGTTCAGAAGTGATTTCTCTTCCTAAGGCAAAGGAAAGATTTGGATTGGGGTATAAGCCGACAACTTCTGAATGGGAGAAGGTTCGAGCAGAGAAAAAGGAAAATAGAAGTGCACGTCTCGAAGGATATAAGGTTGGACCAGAATTTGAGCTGAACAATTGGGAGATCAAGAAGATGTCAAGCATCACTAAAGGATTGCCAAAGAAATTATGTTTGTTATGCACCCTATGGCTATGCCTAAGGCCACAAGGAGTCCTTTGTTAA

Coding sequence (CDS)

ATGATTGCAAAGACAATGATAAGGAGTGGTTATCATATACATGGAGGTTTGGGAAAGCATAATCAAGGAAGTTCAGAAGTGATTTCTCTTCCTAAGGCAAAGGAAAGATTTGGATTGGGGTATAAGCCGACAACTTCTGAATGGGAGAAGGTTCGAGCAGAGAAAAAGGAAAATAGAAGTGCACGTCTCGAAGGATATAAGGTTGGACCAGAATTTGAGCTGAACAATTGGGAGATCAAGAAGATGTCAAGCATCACTAAAGGATTGCCAAAGAAATTATGTTTGTTATGCACCCTATGGCTATGCCTAAGGCCACAAGGAGTCCTTTGTTAA

Protein sequence

MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRSARLEGYKVGPEFELNNWEIKKMSSITKGLPKKLCLLCTLWLCLRPQGVLC

Homology

[Close]

BLAST of Bhi01G000827 vs. TrEMBL
Match: tr|A0A0A0KUJ7|A0A0A0KUJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528430 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 1  MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
          MIAK MI+SG+ +  GLGK+NQG SE+ SLPKAKE+FGLG+KP   +WEKVRA+KK+  +
Sbjct: 11 MIAKPMIKSGFQMTKGLGKNNQGGSELFSLPKAKEKFGLGFKPMAFDWEKVRAKKKKKET 70

Query: 61 ARLEGYK 68
            L   K
Sbjct: 71 HDLRDAK 77

[Close]

BLAST of Bhi01G000827 vs. TrEMBL
Match: tr|A0A1S3EGN5|A0A1S3EGN5_CICAR (LOW QUALITY PROTEIN: uncharacterized protein LOC101500622 OS=Cicer arietinum OX=3827 GN=LOC101500622 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1   MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
           M+AK M+  G+H   GLGK  +G  E + LP+ K+++GLGYKPT  +  ++  EKKE R 
Sbjct: 915 MVAKFMLSRGHHPWHGLGKDEEGLKEPVELPENKDKWGLGYKPTRDDKRRLVKEKKEKRL 974

Query: 61  ARLE 65
           AR+E
Sbjct: 975 ARIE 978

[Close]

BLAST of Bhi01G000827 vs. TrEMBL
Match: tr|A0A1S3EI61|A0A1S3EI61_CICAR (LOW QUALITY PROTEIN: uncharacterized protein LOC101491528 OS=Cicer arietinum OX=3827 GN=LOC101491528 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-07
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 1    MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
            M+AK M+  G+H   GLGK  +G  E++ LP+ ++++GLGYKPT  +  ++  EKKE R 
Sbjct: 1067 MVAKFMLSRGHHPWHGLGKDEEGLKELVELPENRDKWGLGYKPTRDDKWRLVKEKKEKRL 1126

Query: 61   ARLE 65
            AR+E
Sbjct: 1127 ARIE 1130

[Close]

BLAST of Bhi01G000827 vs. TrEMBL
Match: tr|A0A1S3EEX1|A0A1S3EEX1_CICAR (uncharacterized protein LOC101510858 OS=Cicer arietinum OX=3827 GN=LOC101510858 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-07
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1    MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
            M+AK M+  G+H   GLGK  +G  E + LP+ ++++GLGYKPT  +  ++  EKKE R 
Sbjct: 961  MVAKFMLSRGHHPWHGLGKDEEGLKEPVELPENRDKWGLGYKPTRDDKRRLVKEKKEKRL 1020

Query: 61   ARLE 65
            AR+E
Sbjct: 1021 ARIE 1024

[Close]

BLAST of Bhi01G000827 vs. TrEMBL
Match: tr|A0A1S3DWL0|A0A1S3DWL0_CICAR (LOW QUALITY PROTEIN: uncharacterized protein LOC101510369 OS=Cicer arietinum OX=3827 GN=LOC101510369 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-07
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1    MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
            M+AK M+  G+H   GLGK  +G  E + LP+ ++++GLGYKPT  +  ++  EKKE R 
Sbjct: 969  MVAKFMLSRGHHPWHGLGKDEEGLKEPVELPENRDKWGLGYKPTRDDKRRLVKEKKEKRL 1028

Query: 61   ARLE 65
            AR+E
Sbjct: 1029 ARIE 1032

[Close]

BLAST of Bhi01G000827 vs. NCBI nr
Match: KGN51406.1 (hypothetical protein Csa_5G528430 [Cucumis sativus])

HSP 1 Score: 84.0 bits (206), Expect = 3.6e-13
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0


Query: 1  MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
          MIAK MI+SG+ +  GLGK+NQG SE+ SLPKAKE+FGLG+KP   +WEKVRA+KK+  +
Sbjct: 11 MIAKPMIKSGFQMTKGLGKNNQGGSELFSLPKAKEKFGLGFKPMAFDWEKVRAKKKKKET 70

Query: 61 ARLEGYK 68
            L   K
Sbjct: 71 HDLRDAK 77

[Close]

BLAST of Bhi01G000827 vs. NCBI nr
Match: XP_012575005.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101500622 [Cicer arietinum])

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-07
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1   MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
           M+AK M+  G+H   GLGK  +G  E + LP+ K+++GLGYKPT  +  ++  EKKE R 
Sbjct: 915 MVAKFMLSRGHHPWHGLGKDEEGLKEPVELPENKDKWGLGYKPTRDDKRRLVKEKKEKRL 974

Query: 61  ARLE 65
           AR+E
Sbjct: 975 ARIE 978

[Close]

BLAST of Bhi01G000827 vs. NCBI nr
Match: XP_012573958.1 (PREDICTED: uncharacterized protein LOC101510858 [Cicer arietinum])

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1    MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
            M+AK M+  G+H   GLGK  +G  E + LP+ ++++GLGYKPT  +  ++  EKKE R 
Sbjct: 961  MVAKFMLSRGHHPWHGLGKDEEGLKEPVELPENRDKWGLGYKPTRDDKRRLVKEKKEKRL 1020

Query: 61   ARLE 65
            AR+E
Sbjct: 1021 ARIE 1024

[Close]

BLAST of Bhi01G000827 vs. NCBI nr
Match: XP_012575064.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101491528 [Cicer arietinum])

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 1    MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
            M+AK M+  G+H   GLGK  +G  E++ LP+ ++++GLGYKPT  +  ++  EKKE R 
Sbjct: 1067 MVAKFMLSRGHHPWHGLGKDEEGLKELVELPENRDKWGLGYKPTRDDKWRLVKEKKEKRL 1126

Query: 61   ARLE 65
            AR+E
Sbjct: 1127 ARIE 1130

[Close]

BLAST of Bhi01G000827 vs. NCBI nr
Match: XP_012567603.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101510369 [Cicer arietinum])

HSP 1 Score: 63.5 bits (153), Expect = 5.0e-07
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1    MIAKTMIRSGYHIHGGLGKHNQGSSEVISLPKAKERFGLGYKPTTSEWEKVRAEKKENRS 60
            M+AK M+  G+H   GLGK  +G  E + LP+ ++++GLGYKPT  +  ++  EKKE R 
Sbjct: 969  MVAKFMLSRGHHPWHGLGKDEEGLKEPVELPENRDKWGLGYKPTRDDKRRLVKEKKEKRL 1028

Query: 61   ARLE 65
            AR+E
Sbjct: 1029 ARIE 1032

The following BLAST results are available for this feature:

BLAST of Bhi01G000827 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G000827 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G000827 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KUJ7\|A0A0A0KUJ7_CUCSA	2.4e-13	59.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528430 PE=4 SV=1	[more]
tr\|A0A1S3EGN5\|A0A1S3EGN5_CICAR	1.5e-07	46.88	LOW QUALITY PROTEIN: uncharacterized protein LOC101500622 OS=Cicer arietinum OX=...	[more]
tr\|A0A1S3EI61\|A0A1S3EI61_CICAR	3.3e-07	45.31	LOW QUALITY PROTEIN: uncharacterized protein LOC101491528 OS=Cicer arietinum OX=...	[more]
tr\|A0A1S3EEX1\|A0A1S3EEX1_CICAR	3.3e-07	45.31	uncharacterized protein LOC101510858 OS=Cicer arietinum OX=3827 GN=LOC101510858 ...	[more]
tr\|A0A1S3DWL0\|A0A1S3DWL0_CICAR	3.3e-07	45.31	LOW QUALITY PROTEIN: uncharacterized protein LOC101510369 OS=Cicer arietinum OX=...	[more]

BLAST of Bhi01G000827 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51406.1	3.6e-13	59.70	hypothetical protein Csa_5G528430 [Cucumis sativus]	[more]
XP_012575005.1	2.2e-07	46.88	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101500622 [Cicer arie...	[more]
XP_012573958.1	5.0e-07	45.31	PREDICTED: uncharacterized protein LOC101510858 [Cicer arietinum]	[more]
XP_012575064.1	5.0e-07	45.31	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101491528 [Cicer arie...	[more]
XP_012567603.1	5.0e-07	45.31	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101510369 [Cicer arie...	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000827	Bhi01M000827	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000827	Cucumber (Gy14) v1	cgywgoB522
Bhi01G000827	Cucumber (Gy14) v2	cgybwgoB257
Bhi01G000827	Cucurbita maxima (Rimu)	cmawgoB0328
Bhi01G000827	Cucurbita maxima (Rimu)	cmawgoB1006
Bhi01G000827	Cucurbita moschata (Rifu)	cmowgoB0317
Bhi01G000827	Cucurbita moschata (Rifu)	cmowgoB1005
Bhi01G000827	Cucurbita pepo (Zucchini)	cpewgoB0783
Bhi01G000827	Cucurbita pepo (Zucchini)	cpewgoB1110
Bhi01G000827	Wild cucumber (PI 183967)	cpiwgoB269
Bhi01G000827	Cucumber (Chinese Long) v3	cucwgoB272
Bhi01G000827	Cucumber (Chinese Long) v2	cuwgoB269
Bhi01G000827	Bottle gourd (USVL1VR-Ls)	lsiwgoB444
Bhi01G000827	Melon (DHL92) v3.6.1	medwgoB530
Bhi01G000827	Melon (DHL92) v3.5.1	mewgoB529
Bhi01G000827	Watermelon (Charleston Gray)	wcgwgoB426
Bhi01G000827	Watermelon (97103) v2	wgowmbB178
Bhi01G000827	Watermelon (97103) v1	wgowmB201
Bhi01G000827	Silver-seed gourd	carwgoB0365
Bhi01G000827	Silver-seed gourd	carwgoB0876