Bhi01G000650 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000650
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pectinesterase
Location	chr1 : 16701188 .. 16701388 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGAGGTTGCTAACAATGCCAGCATCAAAATGGGTGTTGAGGATTGCAAGGACTTGTTGCAATTCGCCATTGACCACTTGCAGGCATCTTACTCCACTCTTGGCGAACCTGATTTGCACACCAACGCCGAGTTTGGGCCGCGTCGTGCCCGACAACGGCTTCAAATTCAATATCTGTTTTTGAAGATGGTGATATAA

mRNA sequence

ATGATTGAGGTTGCTAACAATGCCAGCATCAAAATGGGTGTTGAGGATTGCAAGGACTTGTTGCAATTCGCCATTGACCACTTGCAGGCATCTTACTCCACTCTTGGCGAACCTGATTTGCACACCAACGCCGAGTTTGGGCCGCGTCGTGCCCGACAACGGCTTCAAATTCAATATCTGTTTTTGAAGATGGTGATATAA

Coding sequence (CDS)

ATGATTGAGGTTGCTAACAATGCCAGCATCAAAATGGGTGTTGAGGATTGCAAGGACTTGTTGCAATTCGCCATTGACCACTTGCAGGCATCTTACTCCACTCTTGGCGAACCTGATTTGCACACCAACGCCGAGTTTGGGCCGCGTCGTGCCCGACAACGGCTTCAAATTCAATATCTGTTTTTGAAGATGGTGATATAA

Protein sequence

MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAEFGPRRARQRLQIQYLFLKMVI

Homology

[Close]

BLAST of Bhi01G000650 vs. TrEMBL
Match: tr|A0A1S3CR27|A0A1S3CR27_CUCME (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC107990290 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-14
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           MIE ANN SIKMGVEDC+DLLQFAID LQASYST+GEPDLHTNA+
Sbjct: 101 MIEAANNRSIKMGVEDCRDLLQFAIDQLQASYSTVGEPDLHTNAD 145

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BLAST of Bhi01G000650 vs. TrEMBL
Match: tr|A0A1S3CSH2|A0A1S3CSH2_CUCME (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503817 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.6e-11
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           ++E  NNASIKM VEDC DLLQFAID LQASYST+GE DLHT+A+
Sbjct: 101 IVEAGNNASIKMSVEDCNDLLQFAIDELQASYSTVGESDLHTDAD 145

[Close]

BLAST of Bhi01G000650 vs. TrEMBL
Match: tr|A0A0A0KLN2|A0A0A0KLN2_CUCSA (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G119700 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.6e-11
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           M+E ANNA+IKM V+DCKDLLQ AID L ASYST+G+PDLHTN +
Sbjct: 100 MVEAANNATIKMSVDDCKDLLQSAIDELHASYSTVGDPDLHTNED 144

[Close]

BLAST of Bhi01G000650 vs. TrEMBL
Match: tr|A0A1S3CR40|A0A1S3CR40_CUCME (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503798 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.5e-10
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           M+E ANNASIKM V+DC+DLLQ AID L ASYST+G+PDLHTN +
Sbjct: 93  MVEAANNASIKMTVDDCRDLLQSAIDELHASYSTVGDPDLHTNED 137

[Close]

BLAST of Bhi01G000650 vs. TrEMBL
Match: tr|A0A0A0KJ73|A0A0A0KJ73_CUCSA (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G125700 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.6e-10
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           ++E + NASIKM VEDCKDLLQFAID LQASYS +GE DLHT+++
Sbjct: 101 IVEASTNASIKMSVEDCKDLLQFAIDELQASYSAVGESDLHTDSD 145

[Close]

BLAST of Bhi01G000650 vs. NCBI nr
Match: XP_008466374.1 (PREDICTED: pectinesterase-like [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-13
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           MIE ANN SIKMGVEDC+DLLQFAID LQASYST+GEPDLHTNA+
Sbjct: 101 MIEAANNRSIKMGVEDCRDLLQFAIDQLQASYSTVGEPDLHTNAD 145

[Close]

BLAST of Bhi01G000650 vs. NCBI nr
Match: XP_004151535.1 (PREDICTED: pectinesterase-like [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 2.8e-13
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           +IE ANN SIKMGVEDC+DLLQFAID LQASYST+GEPDLHTNA+
Sbjct: 100 LIEAANNRSIKMGVEDCRDLLQFAIDQLQASYSTVGEPDLHTNAD 144

[Close]

BLAST of Bhi01G000650 vs. NCBI nr
Match: XP_008466403.1 (PREDICTED: pectinesterase-like [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-10
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           ++E  NNASIKM VEDC DLLQFAID LQASYST+GE DLHT+A+
Sbjct: 101 IVEAGNNASIKMSVEDCNDLLQFAIDELQASYSTVGESDLHTDAD 145

[Close]

BLAST of Bhi01G000650 vs. NCBI nr
Match: XP_004149498.2 (PREDICTED: pectinesterase-like [Cucumis sativus] >KGN49779.1 hypothetical protein Csa_5G119700 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-10
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           M+E ANNA+IKM V+DCKDLLQ AID L ASYST+G+PDLHTN +
Sbjct: 100 MVEAANNATIKMSVDDCKDLLQSAIDELHASYSTVGDPDLHTNED 144

[Close]

BLAST of Bhi01G000650 vs. NCBI nr
Match: XP_008466382.2 (PREDICTED: pectinesterase-like [Cucumis melo])

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-10
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 1   MIEVANNASIKMGVEDCKDLLQFAIDHLQASYSTLGEPDLHTNAE 46
           M+E ANNASIKM V+DC+DLLQ AID L ASYST+G+PDLHTN +
Sbjct: 93  MVEAANNASIKMTVDDCRDLLQSAIDELHASYSTVGDPDLHTNED 137

The following BLAST results are available for this feature:

BLAST of Bhi01G000650 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G000650 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G000650 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CR27\|A0A1S3CR27_CUCME	8.3e-14	86.67	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC107990290 PE=3 SV=1	[more]
tr\|A0A1S3CSH2\|A0A1S3CSH2_CUCME	6.6e-11	75.56	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503817 PE=3 SV=1	[more]
tr\|A0A0A0KLN2\|A0A0A0KLN2_CUCSA	8.6e-11	73.33	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G119700 PE=3 SV=1	[more]
tr\|A0A1S3CR40\|A0A1S3CR40_CUCME	1.5e-10	73.33	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103503798 PE=3 SV=1	[more]
tr\|A0A0A0KJ73\|A0A0A0KJ73_CUCSA	5.6e-10	71.11	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_5G125700 PE=3 SV=1	[more]

BLAST of Bhi01G000650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466374.1	1.3e-13	86.67	PREDICTED: pectinesterase-like [Cucumis melo]	[more]
XP_004151535.1	2.8e-13	84.44	PREDICTED: pectinesterase-like [Cucumis sativus]	[more]
XP_008466403.1	1.0e-10	75.56	PREDICTED: pectinesterase-like [Cucumis melo]	[more]
XP_004149498.2	1.3e-10	73.33	PREDICTED: pectinesterase-like [Cucumis sativus] >KGN49779.1 hypothetical protei...	[more]
XP_008466382.2	2.2e-10	73.33	PREDICTED: pectinesterase-like [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000650	Bhi01M000650	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 3..42
None	No IPR available	PANTHER	PTHR31707:SF118	SUBFAMILY NOT NAMED	coord: 3..42

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000650	Wax gourd	wgowgoB028
Bhi01G000650	Cucumber (Gy14) v1	cgywgoB522
Bhi01G000650	Cucumber (Gy14) v1	cgywgoB730
Bhi01G000650	Cucumber (Gy14) v2	cgybwgoB257
Bhi01G000650	Cucumber (Gy14) v2	cgybwgoB532
Bhi01G000650	Cucurbita maxima (Rimu)	cmawgoB0328
Bhi01G000650	Cucurbita maxima (Rimu)	cmawgoB0473
Bhi01G000650	Cucurbita maxima (Rimu)	cmawgoB1006
Bhi01G000650	Cucurbita maxima (Rimu)	cmawgoB1107
Bhi01G000650	Cucurbita moschata (Rifu)	cmowgoB0317
Bhi01G000650	Cucurbita moschata (Rifu)	cmowgoB0472
Bhi01G000650	Cucurbita moschata (Rifu)	cmowgoB1005
Bhi01G000650	Cucurbita moschata (Rifu)	cmowgoB1104
Bhi01G000650	Cucurbita pepo (Zucchini)	cpewgoB0188
Bhi01G000650	Cucurbita pepo (Zucchini)	cpewgoB0401
Bhi01G000650	Cucurbita pepo (Zucchini)	cpewgoB0783
Bhi01G000650	Cucurbita pepo (Zucchini)	cpewgoB1110
Bhi01G000650	Wild cucumber (PI 183967)	cpiwgoB269
Bhi01G000650	Wild cucumber (PI 183967)	cpiwgoB562
Bhi01G000650	Cucumber (Chinese Long) v3	cucwgoB272
Bhi01G000650	Cucumber (Chinese Long) v3	cucwgoB575
Bhi01G000650	Cucumber (Chinese Long) v2	cuwgoB269
Bhi01G000650	Cucumber (Chinese Long) v2	cuwgoB557
Bhi01G000650	Bottle gourd (USVL1VR-Ls)	lsiwgoB041
Bhi01G000650	Bottle gourd (USVL1VR-Ls)	lsiwgoB432
Bhi01G000650	Melon (DHL92) v3.6.1	medwgoB106
Bhi01G000650	Melon (DHL92) v3.6.1	medwgoB530
Bhi01G000650	Melon (DHL92) v3.5.1	mewgoB105
Bhi01G000650	Melon (DHL92) v3.5.1	mewgoB529
Bhi01G000650	Watermelon (Charleston Gray)	wcgwgoB426
Bhi01G000650	Watermelon (Charleston Gray)	wcgwgoB521
Bhi01G000650	Watermelon (97103) v2	wgowmbB178
Bhi01G000650	Watermelon (97103) v2	wgowmbB203
Bhi01G000650	Watermelon (97103) v1	wgowmB201
Bhi01G000650	Watermelon (97103) v1	wgowmB238
Bhi01G000650	Silver-seed gourd	carwgoB0086
Bhi01G000650	Silver-seed gourd	carwgoB0411
Bhi01G000650	Silver-seed gourd	carwgoB0722
Bhi01G000650	Silver-seed gourd	carwgoB0972