Bhi01G000074 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi01G000074
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr1 : 2015009 .. 2015311 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATAAACTTGGATGATGATGAAGAAGGCTTGAATGAAAAATCAAGGGAGAGTTCAAGGAAAGAAGTCCCTCTTAGAGTCGAAATGAGACAAGTAAAAGAGGATTTGGCCATTTGAAAGGAGGAAGCTACTAGATTGACAAAAGCTACAAATGAAGCGTTGGGATTGCTAAACTCCATTGTAGAAATTATCAATGAAAGATTACCTCCAAGGAACAATTTGGACAAGCGGTCTCAAGATTCAATCTATCCAAATAATTATCCTGCAAAAAGTCTTAAAATAATTGAAGATGAGATGAAT

mRNA sequence

ATGACAATAAACTTGGATGATGATGAAGAAGGCTTGAATGAAAAATCAAGGGAGAGTTCAAGGAAAGAAGTCCCTCTTAGAGTCGAAATGAGACAAGAGGAAGCTACTAGATTGACAAAAGCTACAAATGAAGCGTTGGGATTGCTAAACTCCATTGTAGAAATTATCAATGAAAGATTACCTCCAAGGAACAATTTGGACAAGCGGTCTCAAGATTCAATCTATCCAAATAATTATCCTGCAAAAAGTCTTAAAATAATTGAAGATGAGATGAAT

Coding sequence (CDS)

ATGACAATAAACTTGGATGATGATGAAGAAGGCTTGAATGAAAAATCAAGGGAGAGTTCAAGGAAAGAAGTCCCTCTTAGAGTCGAAATGAGACAAGAGGAAGCTACTAGATTGACAAAAGCTACAAATGAAGCGTTGGGATTGCTAAACTCCATTGTAGAAATTATCAATGAAAGATTACCTCCAAGGAACAATTTGGACAAGCGGTCTCAAGATTCAATCTATCCAAATAATTATCCTGCAAAAAGTCTTAAAATAATTGAAGATGAGATGAAT

Protein sequence

MTINLDDDEEGLNEKSRESSRKEVPLRVEMRQEEATRLTKATNEALGLLNSIVEIINERLPPRNNLDKRSQDSIYPNNYPAKSLKIIEDEMN

Homology

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BLAST of Bhi01G000074 vs. NCBI nr
Match: XP_022156699.1 (cilia- and flagella-associated protein 251-like [Momordica charantia])

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-04
Identity = 28/89 (31.46%), Postives = 54/89 (60.67%), Query Frame = 0


Query: 4   NLDDDEEGLNEKSRESSRKEVPLRVEMRQEEATRLTKATNEALGLLNSIVEIINERLPPR 63
           N+ D  EG N +  E +      +    +E+   +     +  G+L SI+E+IN+R PP+
Sbjct: 13  NMYDMAEGRNIEEEERTETHGSSKSLTLKEKIQEIRSVQKQMPGMLTSILEVINDRFPPK 72

Query: 64  NNLDKRSQDSIYPNNYPAKSLKIIEDEMN 93
           +N++K+SQ+S+  N  P++SLK+++ E++
Sbjct: 73  SNIEKQSQESLQKNVPPSRSLKLLDKEVD 101

The following BLAST results are available for this feature:

BLAST of Bhi01G000074 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi01G000074 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi01G000074 vs. TrEMBL


Match Name	E-value	Identity	Description

BLAST of Bhi01G000074 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156699.1	4.3e-04	31.46	cilia- and flagella-associated protein 251-like [Momordica charantia]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi01M000074	Bhi01M000074	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi01G000074	Wax gourd	wgowgoB029
Bhi01G000074	Cucumber (Gy14) v1	cgywgoB523
Bhi01G000074	Cucumber (Gy14) v1	cgywgoB728
Bhi01G000074	Cucumber (Gy14) v2	cgybwgoB258
Bhi01G000074	Cucumber (Gy14) v2	cgybwgoB531
Bhi01G000074	Cucurbita maxima (Rimu)	cmawgoB0329
Bhi01G000074	Cucurbita maxima (Rimu)	cmawgoB1007
Bhi01G000074	Cucurbita moschata (Rifu)	cmowgoB0318
Bhi01G000074	Cucurbita moschata (Rifu)	cmowgoB1006
Bhi01G000074	Cucurbita pepo (Zucchini)	cpewgoB0784
Bhi01G000074	Cucurbita pepo (Zucchini)	cpewgoB1111
Bhi01G000074	Wild cucumber (PI 183967)	cpiwgoB270
Bhi01G000074	Wild cucumber (PI 183967)	cpiwgoB560
Bhi01G000074	Cucumber (Chinese Long) v3	cucwgoB273
Bhi01G000074	Cucumber (Chinese Long) v3	cucwgoB572
Bhi01G000074	Cucumber (Chinese Long) v2	cuwgoB270
Bhi01G000074	Cucumber (Chinese Long) v2	cuwgoB555
Bhi01G000074	Bottle gourd (USVL1VR-Ls)	lsiwgoB046
Bhi01G000074	Bottle gourd (USVL1VR-Ls)	lsiwgoB445
Bhi01G000074	Melon (DHL92) v3.6.1	medwgoB107
Bhi01G000074	Melon (DHL92) v3.6.1	medwgoB532
Bhi01G000074	Melon (DHL92) v3.5.1	mewgoB106
Bhi01G000074	Melon (DHL92) v3.5.1	mewgoB531
Bhi01G000074	Watermelon (Charleston Gray)	wcgwgoB428
Bhi01G000074	Watermelon (Charleston Gray)	wcgwgoB519
Bhi01G000074	Watermelon (97103) v2	wgowmbB180
Bhi01G000074	Watermelon (97103) v2	wgowmbB201
Bhi01G000074	Watermelon (97103) v1	wgowmB203
Bhi01G000074	Watermelon (97103) v1	wgowmB236
Bhi01G000074	Silver-seed gourd	carwgoB0737
Bhi01G000074	Silver-seed gourd	carwgoB1118