Bhi01G000063 (gene) Wax gourd

Overview
NameBhi01G000063
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCalcium-binding EF-hand
Locationchr1 : 1753807 .. 1754073 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGGTGACCAATATATTGACCGTGGTGAATTTTTGCATTTCATACTGAGTTTGACATCTGAGACGTTCAAATCAGTGAGCCAGAGATTATCGATCCTCACTCTGGTGGTAGCACCAACCGTCGCAGTGGTCACAAAGAAAAGTACTGAAGCCATTCCAGGCGTTGGAAAACTCGTGCAAAAGCTTCCCGTTTCAGCTTATGCTTTTCTCGTCACCCTTGCTGCTCTCATCTTTCAAAAATCTCAGCAGCAGCTTCTTGAATGA

mRNA sequence

ATGAACGGTGACCAATATATTGACCGTGGTGAATTTTTGCATTTCATACTGAGTTTGACATCTGAGACGTTCAAATCAGTGAGCCAGAGATTATCGATCCTCACTCTGGTGGTAGCACCAACCGTCGCAGTGGTCACAAAGAAAAGTACTGAAGCCATTCCAGGCGTTGGAAAACTCGTGCAAAAGCTTCCCGTTTCAGCTTATGCTTTTCTCGTCACCCTTGCTGCTCTCATCTTTCAAAAATCTCAGCAGCAGCTTCTTGAATGA

Coding sequence (CDS)

ATGAACGGTGACCAATATATTGACCGTGGTGAATTTTTGCATTTCATACTGAGTTTGACATCTGAGACGTTCAAATCAGTGAGCCAGAGATTATCGATCCTCACTCTGGTGGTAGCACCAACCGTCGCAGTGGTCACAAAGAAAAGTACTGAAGCCATTCCAGGCGTTGGAAAACTCGTGCAAAAGCTTCCCGTTTCAGCTTATGCTTTTCTCGTCACCCTTGCTGCTCTCATCTTTCAAAAATCTCAGCAGCAGCTTCTTGAATGA

Protein sequence

MNGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQKLPVSAYAFLVTLAALIFQKSQQQLLE
Homology
[Close]
BLAST of Bhi01G000063 vs. TAIR10
Match: AT1G64850.1 (Calcium-binding EF hand family protein)

HSP 1 Score: 84.3 bits (207), Expect = 4.0e-17
Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 0 

Query: 1   MNGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLV 60
           +N D  +DR EF+ FI  +T+ETF  VSQ L I+ L+VAPTVA+ TKK+TE +PGVGK+V
Sbjct: 80  INLDGELDREEFVKFIEQITAETFNVVSQGL-IIALIVAPTVAIATKKATEGVPGVGKVV 139

Query: 61  QKLPVSAYAFLVTLAAL 78
           QKLP S YA LVTLA +
Sbjct: 140 QKLPTSIYASLVTLAVM 155

[Close]
BLAST of Bhi01G000063 vs. TrEMBL
Match: tr|A0A0A0L6I0|A0A0A0L6I0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126970 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-21
Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N +  IDR EFL F+  LTSE+F SVSQRL I+TLVVAPT+AVVTKKSTE +PG+GK+VQ
Sbjct: 77  NQNYAIDREEFLEFVKQLTSESFISVSQRL-IITLVVAPTLAVVTKKSTEGVPGLGKMVQ 136

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           K+P SAYA LVTLAAL+FQ S+QQLL+
Sbjct: 137 KVPSSAYALLVTLAALLFQNSRQQLLK 162

[Close]
BLAST of Bhi01G000063 vs. TrEMBL
Match: tr|A0A1S3AWG2|A0A1S3AWG2_CUCME (uncharacterized protein LOC103483386 OS=Cucumis melo OX=3656 GN=LOC103483386 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N DQ I+R EFL FIL LT++ + +V +R+ ILTLVVAPT A+VTKKSTE IPGVGKLVQ
Sbjct: 87  NKDQVINREEFLEFILHLTTDAYVTVRERVPILTLVVAPTAAIVTKKSTEGIPGVGKLVQ 146

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           KLP SAYA LVT+ A+ FQ S+Q+LL+
Sbjct: 147 KLPTSAYALLVTVVAVTFQNSKQRLLK 173

[Close]
BLAST of Bhi01G000063 vs. TrEMBL
Match: tr|A0A1S3AVI1|A0A1S3AVI1_CUCME (uncharacterized protein LOC103483388 OS=Cucumis melo OX=3656 GN=LOC103483388 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-20
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N +Q IDR EFL FI  LT E+  SVSQRL I+TLVVAPT+AVVTK+STE IPG+GK+VQ
Sbjct: 77  NENQAIDRDEFLKFIKLLTFESIASVSQRL-IITLVVAPTLAVVTKRSTEGIPGLGKMVQ 136

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           K+P SAYA LVTLAAL+FQ S QQLL+
Sbjct: 137 KVPSSAYALLVTLAALLFQNSNQQLLK 162

[Close]
BLAST of Bhi01G000063 vs. TrEMBL
Match: tr|A0A0A0L4F9|A0A0A0L4F9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126960 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.8e-19
Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N DQ I+  EFL FIL LT+  F +V+ ++  +TLVVAPTVA+VTKKSTE IPGVGKLVQ
Sbjct: 83  NKDQVINSDEFLEFILHLTTYAFVTVTGKVPFVTLVVAPTVALVTKKSTEGIPGVGKLVQ 142

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLL 88
           K+P SAYAFLVTL  + FQ S+Q+LL
Sbjct: 143 KMPSSAYAFLVTLVVVAFQNSKQRLL 168

[Close]
BLAST of Bhi01G000063 vs. TrEMBL
Match: tr|C6T2Q8|C6T2Q8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100526914 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.2e-17
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0 

Query: 1   MNGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLV 60
           +N D  IDR EF  FIL +T++TF  VSQ+L ILTLVVAPTVAV TKK+TE +PGVG+LV
Sbjct: 80  INLDGDIDRDEFYDFILIMTADTFTIVSQKL-ILTLVVAPTVAVATKKATEGVPGVGRLV 139

Query: 61  QKLPVSAYAFLVTLAALIFQKSQQ 85
           QK+P S YA LVT+AA+ FQK  Q
Sbjct: 140 QKIPNSVYASLVTIAAVWFQKKAQ 162

[Close]
BLAST of Bhi01G000063 vs. NCBI nr
Match: XP_004133938.1 (PREDICTED: uncharacterized protein LOC101219769 [Cucumis sativus] >KGN56634.1 hypothetical protein Csa_3G126970 [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 4.9e-21
Identity = 62/87 (71.26%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N +  IDR EFL F+  LTSE+F SVSQRL I+TLVVAPT+AVVTKKSTE +PG+GK+VQ
Sbjct: 77  NQNYAIDREEFLEFVKQLTSESFISVSQRL-IITLVVAPTLAVVTKKSTEGVPGLGKMVQ 136

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           K+P SAYA LVTLAAL+FQ S+QQLL+
Sbjct: 137 KVPSSAYALLVTLAALLFQNSRQQLLK 162

[Close]
BLAST of Bhi01G000063 vs. NCBI nr
Match: XP_008438213.1 (PREDICTED: uncharacterized protein LOC103483386 [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 1.9e-20
Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N DQ I+R EFL FIL LT++ + +V +R+ ILTLVVAPT A+VTKKSTE IPGVGKLVQ
Sbjct: 87  NKDQVINREEFLEFILHLTTDAYVTVRERVPILTLVVAPTAAIVTKKSTEGIPGVGKLVQ 146

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           KLP SAYA LVT+ A+ FQ S+Q+LL+
Sbjct: 147 KLPTSAYALLVTVVAVTFQNSKQRLLK 173

[Close]
BLAST of Bhi01G000063 vs. NCBI nr
Match: XP_008438214.1 (PREDICTED: uncharacterized protein LOC103483388 [Cucumis melo])

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-20
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N +Q IDR EFL FI  LT E+  SVSQRL I+TLVVAPT+AVVTK+STE IPG+GK+VQ
Sbjct: 77  NENQAIDRDEFLKFIKLLTFESIASVSQRL-IITLVVAPTLAVVTKRSTEGIPGLGKMVQ 136

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           K+P SAYA LVTLAAL+FQ S QQLL+
Sbjct: 137 KVPSSAYALLVTLAALLFQNSNQQLLK 162

[Close]
BLAST of Bhi01G000063 vs. NCBI nr
Match: XP_022950463.1 (uncharacterized protein LOC111453554 [Cucurbita moschata])

HSP 1 Score: 105.9 bits (263), Expect = 7.0e-20
Identity = 58/87 (66.67%), Postives = 71/87 (81.61%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N +  ID+GEF  F+  LTSETFKSVSQ+L +LTLV+APT+AV TKK TE +PGVGKLVQ
Sbjct: 82  NKNTKIDKGEFFGFMEELTSETFKSVSQKL-VLTLVIAPTIAVFTKKRTEGVPGVGKLVQ 141

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           KLP SAYA ++TLAA++FQ SQ  LL+
Sbjct: 142 KLPSSAYASIITLAAVLFQSSQHPLLK 167

[Close]
BLAST of Bhi01G000063 vs. NCBI nr
Match: XP_022980436.1 (uncharacterized protein LOC111479803 [Cucurbita maxima])

HSP 1 Score: 105.5 bits (262), Expect = 9.2e-20
Identity = 62/87 (71.26%), Postives = 71/87 (81.61%), Query Frame = 0 

Query: 2   NGDQYIDRGEFLHFILSLTSETFKSVSQRLSILTLVVAPTVAVVTKKSTEAIPGVGKLVQ 61
           N D+ I R EFL FILSLTS+ F S+S RL ILTLV+APTVAVVTK+STE IP VG LVQ
Sbjct: 79  NEDKKIGRDEFLGFILSLTSDAFISLSHRL-ILTLVIAPTVAVVTKRSTEGIPVVGSLVQ 138

Query: 62  KLPVSAYAFLVTLAALIFQKSQQQLLE 89
           KLP SAYAFLVTLAA +FQ SQ+ +L+
Sbjct: 139 KLPSSAYAFLVTLAAFVFQNSQKPMLK 164

The following BLAST results are available for this feature:
BLAST of Bhi01G000063 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64850.14.0e-1761.04Calcium-binding EF hand family protein[more]
BLAST of Bhi01G000063 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi01G000063 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6I0|A0A0A0L6I0_CUCSA3.2e-2171.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126970 PE=4 SV=1[more]
tr|A0A1S3AWG2|A0A1S3AWG2_CUCME1.2e-2066.67uncharacterized protein LOC103483386 OS=Cucumis melo OX=3656 GN=LOC103483386 PE=... [more]
tr|A0A1S3AVI1|A0A1S3AVI1_CUCME2.7e-2071.26uncharacterized protein LOC103483388 OS=Cucumis melo OX=3656 GN=LOC103483388 PE=... [more]
tr|A0A0A0L4F9|A0A0A0L4F9_CUCSA8.8e-1965.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126960 PE=4 SV=1[more]
tr|C6T2Q8|C6T2Q8_SOYBN8.2e-1765.48Uncharacterized protein OS=Glycine max OX=3847 GN=100526914 PE=2 SV=1[more]
BLAST of Bhi01G000063 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004133938.14.9e-2171.26PREDICTED: uncharacterized protein LOC101219769 [Cucumis sativus] >KGN56634.1 hy... [more]
XP_008438213.11.9e-2066.67PREDICTED: uncharacterized protein LOC103483386 [Cucumis melo][more]
XP_008438214.14.1e-2071.26PREDICTED: uncharacterized protein LOC103483388 [Cucumis melo][more]
XP_022950463.17.0e-2066.67uncharacterized protein LOC111453554 [Cucurbita moschata][more]
XP_022980436.19.2e-2071.26uncharacterized protein LOC111479803 [Cucurbita maxima][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi01M000063Bhi01M000063mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11639S100 CALCIUM-BINDING PROTEINcoord: 2..85
NoneNo IPR availablePANTHERPTHR11639:SF62SUBFAMILY NOT NAMEDcoord: 2..85

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi01G000063Cucsa.257330Cucumber (Gy14) v1cgywgoB523
Bhi01G000063Lsi05G019280Bottle gourd (USVL1VR-Ls)lsiwgoB445
Bhi01G000063Carg14858Silver-seed gourdcarwgoB0737
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi01G000063Wax gourdwgowgoB029
Bhi01G000063Cucumber (Gy14) v1cgywgoB728
Bhi01G000063Cucumber (Gy14) v2cgybwgoB258
Bhi01G000063Cucumber (Gy14) v2cgybwgoB531
Bhi01G000063Cucurbita maxima (Rimu)cmawgoB0329
Bhi01G000063Cucurbita maxima (Rimu)cmawgoB1007
Bhi01G000063Cucurbita moschata (Rifu)cmowgoB0318
Bhi01G000063Cucurbita moschata (Rifu)cmowgoB1006
Bhi01G000063Cucurbita pepo (Zucchini)cpewgoB0784
Bhi01G000063Cucurbita pepo (Zucchini)cpewgoB1111
Bhi01G000063Wild cucumber (PI 183967)cpiwgoB270
Bhi01G000063Wild cucumber (PI 183967)cpiwgoB560
Bhi01G000063Cucumber (Chinese Long) v3cucwgoB273
Bhi01G000063Cucumber (Chinese Long) v3cucwgoB572
Bhi01G000063Cucumber (Chinese Long) v2cuwgoB270
Bhi01G000063Cucumber (Chinese Long) v2cuwgoB555
Bhi01G000063Bottle gourd (USVL1VR-Ls)lsiwgoB046
Bhi01G000063Melon (DHL92) v3.6.1medwgoB107
Bhi01G000063Melon (DHL92) v3.6.1medwgoB532
Bhi01G000063Melon (DHL92) v3.5.1mewgoB106
Bhi01G000063Melon (DHL92) v3.5.1mewgoB531
Bhi01G000063Watermelon (Charleston Gray)wcgwgoB428
Bhi01G000063Watermelon (Charleston Gray)wcgwgoB519
Bhi01G000063Watermelon (97103) v2wgowmbB180
Bhi01G000063Watermelon (97103) v2wgowmbB201
Bhi01G000063Watermelon (97103) v1wgowmB203
Bhi01G000063Watermelon (97103) v1wgowmB236
Bhi01G000063Silver-seed gourdcarwgoB1118