Sed0018084.1 (mRNA) Chayote v1

Overview


Name	Sed0018084.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG08: 3157151 .. 3158301 (-)
Sequence length	1151
RNA-Seq Expression	Sed0018084.1
Synteny	Sed0018084.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTCGCACCCAAAATCCAATATTAAAAAAATAAAAAATAAAAGCGTTGATATCATTGTCTGCATATAAATATAATTCTGATGCATAATTCCAAACACAGCCTTTTCCTTTATCTTCCCTTCCACACAATGTTCATGGACGACGCCGGCGAATCCAATCGGAGAAAAGATCATCACGGCGGCGACGGCGACGGCGAAGAAGAAACAGAGGAGTGCGCTTCTCTCTCCGATCTTCCGCTCGACAATTCGGAAACCTTCCGCAAGAATCCACGCAGATCCTCCTCCGAGCCGCTCGATCTGTTCGAGTTCTTCACCACTGGATTCATCGCCTCTGAAATTTCTCCGGCCGAGGATTTGATCTTCCGCGGCAGATTGCTTCCTCTCAACGATCACTCCGACAAGAATTTCTTCAAACAGACTGGATTTCGAAAACGATCCGAGTCGCTGTCCGGATTGCAGAGCTCTGTTTCTCGATCCAACAGTGCGAAGATCAATCTCAAGCGGAATAGCCGATCGCTCGATTACCGCAAGCTATATCGCCAATCGGACTCGATTTTCTCTCCGACGGTTGAATTCGATCGAAAATTTCCGATCAAGAGCGGATTCAAGGCGGATCCGATGAACAAAAAGCCGTCGTCGAAGCCGCGGTGGTACTTTCTAATGTTCGGAATGGTGAAATTTCCGGCGGAGATGGAACTCAGCGACATTAAGAGCAGACAAGTCCGCCGCCGTCCGTCGGCAGTTTTTACGGCGAATGAGAGTAAAGGTAAGTTTCCGTGTAACCGGAGCTCCAGCGAGGCGGCCTGGAGAATTCTCCGGGCGCTGAGCTGCAAGAACCACGTTAGTGTAGATGTAAGGGCGTCGTTAACCGCCTGAGTTTGTCACGTGCATTGCACGTGACAGGTGGTTGCATTTGTTACGATATTGCCCTCTCGTGATGCCGTGAAGTTCCATTACCGTGAGAAGGTCATTTTGGGAATTTATGAATTAAAATGAAAAACGTCATTATGATTCACGTCGAAGGGACGGTACTGTACAGTAGCGGGGCGTGACCGATGATGATGGTGCGGTTTCTTTTAAATCTTTTTTTTTTTTTTTTTAATTTTTGTTTTAATTTGAAAGAATTGTTTGGTTTGTTGGTGACAAAGAG

mRNA sequence

CAATTTCGCACCCAAAATCCAATATTAAAAAAATAAAAAATAAAAGCGTTGATATCATTGTCTGCATATAAATATAATTCTGATGCATAATTCCAAACACAGCCTTTTCCTTTATCTTCCCTTCCACACAATGTTCATGGACGACGCCGGCGAATCCAATCGGAGAAAAGATCATCACGGCGGCGACGGCGACGGCGAAGAAGAAACAGAGGAGTGCGCTTCTCTCTCCGATCTTCCGCTCGACAATTCGGAAACCTTCCGCAAGAATCCACGCAGATCCTCCTCCGAGCCGCTCGATCTGTTCGAGTTCTTCACCACTGGATTCATCGCCTCTGAAATTTCTCCGGCCGAGGATTTGATCTTCCGCGGCAGATTGCTTCCTCTCAACGATCACTCCGACAAGAATTTCTTCAAACAGACTGGATTTCGAAAACGATCCGAGTCGCTGTCCGGATTGCAGAGCTCTGTTTCTCGATCCAACAGTGCGAAGATCAATCTCAAGCGGAATAGCCGATCGCTCGATTACCGCAAGCTATATCGCCAATCGGACTCGATTTTCTCTCCGACGGTTGAATTCGATCGAAAATTTCCGATCAAGAGCGGATTCAAGGCGGATCCGATGAACAAAAAGCCGTCGTCGAAGCCGCGGTGGTACTTTCTAATGTTCGGAATGGTGAAATTTCCGGCGGAGATGGAACTCAGCGACATTAAGAGCAGACAAGTCCGCCGCCGTCCGTCGGCAGTTTTTACGGCGAATGAGAGTAAAGGTAAGTTTCCGTGTAACCGGAGCTCCAGCGAGGCGGCCTGGAGAATTCTCCGGGCGCTGAGCTGCAAGAACCACGTTAGTGTAGATGTAAGGGCGTCGTTAACCGCCTGAGTTTGTCACGTGCATTGCACGTGACAGGTGGTTGCATTTGTTACGATATTGCCCTCTCGTGATGCCGTGAAGTTCCATTACCGTGAGAAGGTCATTTTGGGAATTTATGAATTAAAATGAAAAACGTCATTATGATTCACGTCGAAGGGACGGTACTGTACAGTAGCGGGGCGTGACCGATGATGATGGTGCGGTTTCTTTTAAATCTTTTTTTTTTTTTTTTTAATTTTTGTTTTAATTTGAAAGAATTGTTTGGTTTGTTGGTGACAAAGAG

Coding sequence (CDS)

ATGCATAATTCCAAACACAGCCTTTTCCTTTATCTTCCCTTCCACACAATGTTCATGGACGACGCCGGCGAATCCAATCGGAGAAAAGATCATCACGGCGGCGACGGCGACGGCGAAGAAGAAACAGAGGAGTGCGCTTCTCTCTCCGATCTTCCGCTCGACAATTCGGAAACCTTCCGCAAGAATCCACGCAGATCCTCCTCCGAGCCGCTCGATCTGTTCGAGTTCTTCACCACTGGATTCATCGCCTCTGAAATTTCTCCGGCCGAGGATTTGATCTTCCGCGGCAGATTGCTTCCTCTCAACGATCACTCCGACAAGAATTTCTTCAAACAGACTGGATTTCGAAAACGATCCGAGTCGCTGTCCGGATTGCAGAGCTCTGTTTCTCGATCCAACAGTGCGAAGATCAATCTCAAGCGGAATAGCCGATCGCTCGATTACCGCAAGCTATATCGCCAATCGGACTCGATTTTCTCTCCGACGGTTGAATTCGATCGAAAATTTCCGATCAAGAGCGGATTCAAGGCGGATCCGATGAACAAAAAGCCGTCGTCGAAGCCGCGGTGGTACTTTCTAATGTTCGGAATGGTGAAATTTCCGGCGGAGATGGAACTCAGCGACATTAAGAGCAGACAAGTCCGCCGCCGTCCGTCGGCAGTTTTTACGGCGAATGAGAGTAAAGGTAAGTTTCCGTGTAACCGGAGCTCCAGCGAGGCGGCCTGGAGAATTCTCCGGGCGCTGAGCTGCAAGAACCACGTTAGTGTAGATGTAAGGGCGTCGTTAACCGCCTGA

Protein sequence

MHNSKHSLFLYLPFHTMFMDDAGESNRRKDHHGGDGDGEEETEECASLSDLPLDNSETFRKNPRRSSSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHSDKNFFKQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKFPIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKGKFPCNRSSSEAAWRILRALSCKNHVSVDVRASLTA

Homology

[Close]

BLAST of Sed0018084.1 vs. NCBI nr
Match: KAG7023388.1 (hypothetical protein SDJN02_14413 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 1.1e-91
Identity = 195/276 (70.65%), Postives = 212/276 (76.81%), Query Frame = 0


Query: 17  MFMDDAGE-----SNRRKDHHGGDGDGEEETEECASLSDLPLDNS-------ETFRKNPR 76
           MFMDD  E     S  R+DHH  + + E E EE  S SDLPLD         E+FRKNPR
Sbjct: 1   MFMDDTSESKPLTSQHRQDHHYDEDEDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPR 60

Query: 77  RSSSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS----------DKNFF---- 136
           RSSSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS          +K+F+    
Sbjct: 61  RSSSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDES 120

Query: 137 -KQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKF 196
            KQT FRKRSESLSGLQSSVSRSN+AKINLKRNSRSLDYRKLYRQ++SIFSPT E DR  
Sbjct: 121 RKQTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNC 180

Query: 197 PIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKG 256
            IK+G K DP+NKK SSKPRWY LMFGMVKFPAEM+LSDIKSRQVRR  SA+F ANESKG
Sbjct: 181 SIKAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKG 240

Query: 257 KFPC-NRSSSEAAWRILRALSCKNHVSVDVRASLTA 265
           K+ C NRSS EA WRILRALSCKN+ SVDV ASLTA
Sbjct: 241 KYHCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of Sed0018084.1 vs. NCBI nr
Match: XP_022921809.1 (uncharacterized protein LOC111429953 [Cucurbita moschata])

HSP 1 Score: 346.3 bits (887), Expect = 2.4e-91
Identity = 195/276 (70.65%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 17  MFMDDAGE-----SNRRKDHHGGDGDGEEETEECASLSDLPLDNS-------ETFRKNPR 76
           MFMDD  E     S  R+DHH  +   E E EE  S SDLPLD         E+FRKNPR
Sbjct: 1   MFMDDTSESKPLTSQHRQDHHYDEDGDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPR 60

Query: 77  RSSSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS----------DKNFF---- 136
           RSSSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS          +K+F+    
Sbjct: 61  RSSSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDES 120

Query: 137 -KQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKF 196
            KQT FRKRSESLSGLQSSVSRSN+AKINLKRNSRSLDYRKLYRQ++SIFSPT E DR  
Sbjct: 121 RKQTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNC 180

Query: 197 PIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKG 256
            IK+G K DP+NKK SSKPRWY LMFGMVKFPAEM+LSDIKSRQVRR  SA+F ANESKG
Sbjct: 181 SIKAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKG 240

Query: 257 KFPC-NRSSSEAAWRILRALSCKNHVSVDVRASLTA 265
           K+ C NRSS EA WRILRALSCKN+ SVDV ASLTA
Sbjct: 241 KYHCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of Sed0018084.1 vs. NCBI nr
Match: XP_023516073.1 (uncharacterized protein LOC111780044 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.0 bits (881), Expect = 1.2e-90
Identity = 194/277 (70.04%), Postives = 210/277 (75.81%), Query Frame = 0


Query: 17  MFMDDAGE-----SNRRKDHHGGDGDGEEETEECASLSDLPLDNS-------ETFRKNPR 76
           MFMDD  E     S  R+DHH  +   E E EE  S SDLPLD         E+FRKNPR
Sbjct: 1   MFMDDTSESKPLTSQHRQDHHHDEDGHENEAEEALSFSDLPLDKQKSDGHTPESFRKNPR 60

Query: 77  RSSSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS-----------DKNFF--- 136
           RSSSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS           +K+F+   
Sbjct: 61  RSSSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTTNPTAEKSFWKDE 120

Query: 137 --KQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRK 196
             KQ  FRKRSESLSGLQSSVSRSN+AKINLKRNSRSLDYRKLYRQ++SIFSPT E DR 
Sbjct: 121 SRKQNVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRN 180

Query: 197 FPIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESK 256
             IK+G K DP+NKK SSKPRWY LMFGMVKFPAEM+LSDIKSRQVRR  SA+F ANESK
Sbjct: 181 CSIKAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESK 240

Query: 257 GKFPC-NRSSSEAAWRILRALSCKNHVSVDVRASLTA 265
           GK+ C NRSS EA WRILRALSCKN+ SVDV ASLTA
Sbjct: 241 GKYHCNNRSSGEATWRILRALSCKNYASVDVTASLTA 277

[Close]

BLAST of Sed0018084.1 vs. NCBI nr
Match: KAG6589708.1 (hypothetical protein SDJN03_15131, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 342.8 bits (878), Expect = 2.6e-90
Identity = 193/274 (70.44%), Postives = 210/274 (76.64%), Query Frame = 0


Query: 19  MDDAGE-----SNRRKDHHGGDGDGEEETEECASLSDLPLDNS-------ETFRKNPRRS 78
           MDD  E     S  R+DHH  + + E E EE  S SDLPLD         E+FRKNPRRS
Sbjct: 1   MDDTSESKPLTSQHRQDHHYDEDEDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPRRS 60

Query: 79  SSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS----------DKNFF-----K 138
           SSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS          +K+F+     K
Sbjct: 61  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDESRK 120

Query: 139 QTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKFPI 198
           QT FRKRSESLSGLQSSVSRSN+AKINLKRNSRSLDYRKLYRQ++SIFSPT E DR   I
Sbjct: 121 QTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSI 180

Query: 199 KSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKGKF 258
           K+G K DP+NKK SSKPRWY LMFGMVKFPAEM+LSDIKSRQVRR  SA+F ANESKGK+
Sbjct: 181 KAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKGKY 240

Query: 259 PC-NRSSSEAAWRILRALSCKNHVSVDVRASLTA 265
            C NRSS EA WRILRALSCKN+ SVDV ASLTA
Sbjct: 241 HCNNRSSGEATWRILRALSCKNYASVDVTASLTA 274

[Close]

BLAST of Sed0018084.1 vs. NCBI nr
Match: XP_038879756.1 (uncharacterized protein LOC120071507 [Benincasa hispida] >XP_038879758.1 uncharacterized protein LOC120071507 [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 4.4e-90
Identity = 191/269 (71.00%), Postives = 207/269 (76.95%), Query Frame = 0


Query: 17  MFMDDAGESNRRKDHHGGDGDGEEETEECASLSDLPLD--------NSETFRKNPRRSSS 76
           MFMDD+ ESN     H  D D ++E+EE  S SDLPLD        + E+ RKNPRRSSS
Sbjct: 1   MFMDDSTESNPLNSLH--DQDADDESEESLSFSDLPLDREKSDGHTHPESLRKNPRRSSS 60

Query: 77  EPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS-------DKNFF------KQTGF 136
           EPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS       +K+F+      KQT F
Sbjct: 61  EPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSPLTTRTAEKSFWKEEINRKQTVF 120

Query: 137 RKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKFPIKSGF 196
           RKRSESLSGLQSSVSRSNSAK NLKRNSRSLDYRKLYRQ +SIFSPT E DR   I +G 
Sbjct: 121 RKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRKLYRQKNSIFSPTAEIDRNCTINTGL 180

Query: 197 KADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKGKFPCNR 256
           K D +NKK SSKPRWY LMFGMVKFPAEM+L DIKSRQVRR  S +F ANE+KGKF CNR
Sbjct: 181 KPDSLNKKASSKPRWYLLMFGMVKFPAEMDLRDIKSRQVRRSSSVLFPANENKGKFHCNR 240

Query: 257 SSSEAAWRILRALSCKNHVSVDVRASLTA 265
           SS EAAWRILRALSCKNH SVDV ASLTA
Sbjct: 241 SSGEAAWRILRALSCKNHASVDVTASLTA 267

[Close]

BLAST of Sed0018084.1 vs. ExPASy TrEMBL
Match: A0A6J1E1L2 (uncharacterized protein LOC111429953 OS=Cucurbita moschata OX=3662 GN=LOC111429953 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.1e-91
Identity = 195/276 (70.65%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 17  MFMDDAGE-----SNRRKDHHGGDGDGEEETEECASLSDLPLDNS-------ETFRKNPR 76
           MFMDD  E     S  R+DHH  +   E E EE  S SDLPLD         E+FRKNPR
Sbjct: 1   MFMDDTSESKPLTSQHRQDHHYDEDGDENEAEEALSFSDLPLDKQKSDGHTPESFRKNPR 60

Query: 77  RSSSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS----------DKNFF---- 136
           RSSSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS          +K+F+    
Sbjct: 61  RSSSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSQLTTSTNRTAEKSFWKDES 120

Query: 137 -KQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKF 196
            KQT FRKRSESLSGLQSSVSRSN+AKINLKRNSRSLDYRKLYRQ++SIFSPT E DR  
Sbjct: 121 RKQTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQTNSIFSPTAEIDRNC 180

Query: 197 PIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKG 256
            IK+G K DP+NKK SSKPRWY LMFGMVKFPAEM+LSDIKSRQVRR  SA+F ANESKG
Sbjct: 181 SIKAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPANESKG 240

Query: 257 KFPC-NRSSSEAAWRILRALSCKNHVSVDVRASLTA 265
           K+ C NRSS EA WRILRALSCKN+ SVDV ASLTA
Sbjct: 241 KYHCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of Sed0018084.1 vs. ExPASy TrEMBL
Match: A0A6J1JAL3 (uncharacterized protein LOC111485063 OS=Cucurbita maxima OX=3661 GN=LOC111485063 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.8e-90
Identity = 194/276 (70.29%), Postives = 210/276 (76.09%), Query Frame = 0


Query: 17  MFMDDAGE-----SNRRKDHHGGDGDGEEETEECASLSDLPLDNS-------ETFRKNPR 76
           MFMDD  E     S  R+DHH  +   E E EE  S SDLPLD         E+FRKNPR
Sbjct: 1   MFMDDTSESKPLTSQHRQDHHHDEDGHENEAEEALSFSDLPLDKQKSDGHTPESFRKNPR 60

Query: 77  RSSSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS----------DKNFF---- 136
           RSSSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLND S          DK+F+    
Sbjct: 61  RSSSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDLSQLTTSTNRTADKSFWKDES 120

Query: 137 -KQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKF 196
            KQT FRKRSESLSGLQSSVSRSN+AKINLKRNSRSLDYRKLYRQ++SIFSPT E DR  
Sbjct: 121 RKQTVFRKRSESLSGLQSSVSRSNTAKINLKRNSRSLDYRKLYRQANSIFSPTAEIDRNC 180

Query: 197 PIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKG 256
            IK+G K DP+NKK SSKPRWY LMFGMVKFPAEM+LSDIKSRQVRR  SA+F A+ESKG
Sbjct: 181 SIKAGLKPDPLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSALFPASESKG 240

Query: 257 KFPC-NRSSSEAAWRILRALSCKNHVSVDVRASLTA 265
           K+ C NRSS EA WRILRALSCKN+ SVDV ASLTA
Sbjct: 241 KYHCNNRSSGEATWRILRALSCKNYASVDVTASLTA 276

[Close]

BLAST of Sed0018084.1 vs. ExPASy TrEMBL
Match: A0A5A7UVS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006030 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.7e-87
Identity = 186/269 (69.14%), Postives = 206/269 (76.58%), Query Frame = 0


Query: 19  MDDAGESN----RRKDHHGGDGDGEEETEECASLSDLPLD--------NSETFRKNPRRS 78
           MDD  ESN    +R  H   + D + E++E  S SDLP+D        + ++FRKNPRRS
Sbjct: 1   MDDTSESNPLTSKRNQH---EDDDDFESDESLSFSDLPMDRENSDAHTHPDSFRKNPRRS 60

Query: 79  SSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS-----DKNFF------KQTGF 138
           SSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS     DK+F+      KQT F
Sbjct: 61  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSTRITADKSFWKEEISRKQTVF 120

Query: 139 RKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKFPIKSGF 198
           RKRSESLSGLQSSVSRSNSAK NLKRNSRSLDYR+LYRQ++SIFSPT E DR   IK+G 
Sbjct: 121 RKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQANSIFSPTAEIDRNCSIKTGL 180

Query: 199 KADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKGKFPCNR 258
           K D +NKK SSKPRWY LMFGMVKFPAEMELSDIKSRQVRR  S +F +NE+K KF C R
Sbjct: 181 KPDSLNKKTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPSNETKSKFHCGR 240

Query: 259 SSSEAAWRILRALSCKNHVSVDVRASLTA 265
           SS EA WRILRALSCKNH SVDV ASLTA
Sbjct: 241 SSGEATWRILRALSCKNHASVDVTASLTA 266

[Close]

BLAST of Sed0018084.1 vs. ExPASy TrEMBL
Match: A0A1S3BW36 (uncharacterized protein LOC103494265 OS=Cucumis melo OX=3656 GN=LOC103494265 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.7e-87
Identity = 186/269 (69.14%), Postives = 206/269 (76.58%), Query Frame = 0


Query: 19  MDDAGESN----RRKDHHGGDGDGEEETEECASLSDLPLD--------NSETFRKNPRRS 78
           MDD  ESN    +R  H   + D + E++E  S SDLP+D        + ++FRKNPRRS
Sbjct: 1   MDDTSESNPLTSKRNQH---EDDDDFESDESLSFSDLPMDRENSDAHTHPDSFRKNPRRS 60

Query: 79  SSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS-----DKNFF------KQTGF 138
           SSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS     DK+F+      KQT F
Sbjct: 61  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSTRITADKSFWKEEISRKQTVF 120

Query: 139 RKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKFPIKSGF 198
           RKRSESLSGLQSSVSRSNSAK NLKRNSRSLDYR+LYRQ++SIFSPT E DR   IK+G 
Sbjct: 121 RKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQANSIFSPTAEIDRNCSIKTGL 180

Query: 199 KADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKGKFPCNR 258
           K D +NKK SSKPRWY LMFGMVKFPAEMELSDIKSRQVRR  S +F +NE+K KF C R
Sbjct: 181 KPDSLNKKTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPSNETKSKFHCGR 240

Query: 259 SSSEAAWRILRALSCKNHVSVDVRASLTA 265
           SS EA WRILRALSCKNH SVDV ASLTA
Sbjct: 241 SSGEATWRILRALSCKNHASVDVTASLTA 266

[Close]

BLAST of Sed0018084.1 vs. ExPASy TrEMBL
Match: A0A5D3CL04 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00430 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 7.2e-86
Identity = 185/269 (68.77%), Postives = 206/269 (76.58%), Query Frame = 0


Query: 19  MDDAGESN----RRKDHHGGDGDGEEETEECASLSDLPLD--------NSETFRKNPRRS 78
           MDD  ESN    +R  H   + D + E++E  S SDLP+D        + ++FRKNPRRS
Sbjct: 1   MDDTSESNPLTSKRNQH---EDDDDFESDESLSFSDLPMDRENSDAHTHPDSFRKNPRRS 60

Query: 79  SSEPLDLFEFFTTGFIASEISPAEDLIFRGRLLPLNDHS-----DKNFF------KQTGF 138
           SSEPLDLFEFF+ GFI SEISPAEDLIF GRLLPLNDHS     DK+F+      KQT F
Sbjct: 61  SSEPLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHSTRITADKSFWKEEISRKQTVF 120

Query: 139 RKRSESLSGLQSSVSRSNSAKINLKRNSRSLDYRKLYRQSDSIFSPTVEFDRKFPIKSGF 198
           RKRSESLSGLQSSVSRSNSAK NLKRNSRSLDYR+LYRQ++SIFSPT E DR   IK+G 
Sbjct: 121 RKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQANSIFSPTAEIDRNCSIKTGL 180

Query: 199 KADPMNKKPSSKPRWYFLMFGMVKFPAEMELSDIKSRQVRRRPSAVFTANESKGKFPCNR 258
           K D +NKK +SKPRWY LMFGMVKFPAEMELSDIKSRQVRR  S +F +NE+K KF C R
Sbjct: 181 KPDSLNKK-TSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPSNETKSKFHCGR 240

Query: 259 SSSEAAWRILRALSCKNHVSVDVRASLTA 265
           SS EA WRILRALSCKNH SVDV ASLTA
Sbjct: 241 SSGEATWRILRALSCKNHASVDVTASLTA 265

[Close]

BLAST of Sed0018084.1 vs. TAIR 10
Match: AT4G30230.1 (unknown protein; Has 42 Blast hits to 42 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-28
Identity = 94/242 (38.84%), Postives = 128/242 (52.89%), Query Frame = 0


Query: 39  EEETEECASLSDLPLDNSETFRKNPRRSSSE-----PLDLFEFFTTGFIASEISPAEDLI 98
           EEE E+  SL DLPL       KNP  +++E       +LFEF T+   + +++PAE++I
Sbjct: 24  EEEKEDALSLRDLPLK-----AKNPNPTTTEDHKEPSTELFEFLTSS--SYDVAPAENII 83

Query: 99  FRGRLLPLNDHSDKNFFK-----QTGFRKRSESLSGLQS-SVSRSNSAKINLKRN----- 158
           F G+L+PLN      FF          R RSESLS +Q   ++R  S  +  + N     
Sbjct: 84  FGGKLIPLN--YQNAFFSPPEHISRRIRSRSESLSAIQGHKLNRPGSCTVARRDNAGPMR 143

Query: 159 -SRSLDYRKLYRQSDSIFSPTVEFDRKFPIKSGFKADPMN--KKPSSKPRWYFLMFGMVK 218
            SRSLDYRKL R   ++ SP    +     K+  K +  +     S +PRWY +MFGMVK
Sbjct: 144 ASRSLDYRKLSRGLTTVHSPP---ENSSSTKNTGKPETTSSGSVKSVRPRWYVIMFGMVK 203

Query: 219 FPAEMELSDIKSRQVRRR-PSAVFTANESKGKFPCNRSSSEAAWRILRALSCKNHVSVDV 261
           FP E+EL DIKSRQ+RR  P  +F +  ++        S   +WR L ALSCK   SV  
Sbjct: 204 FPPEIELKDIKSRQIRRNIPPVMFPSPANRRARGSRSPSPSPSWRFLNALSCKKPTSVAA 253

[Close]

BLAST of Sed0018084.1 vs. TAIR 10
Match: AT5G67350.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05
Identity = 70/237 (29.54%), Postives = 96/237 (40.51%), Query Frame = 0


Query: 39  EEETEECASLSDLPLDNSETFRKNPRRSSSEPLDLFEF-----FTTGF----IASEISPA 98
           EEE EE  SL DLP +  E  R   +    E    FEF     F  G      A E+S A
Sbjct: 28  EEEEEEALSLCDLPNEKGE-LRSIVKEEDEEFDSGFEFGIGSSFRAGSDSCEPAPEMSTA 87

Query: 99  EDLIFRGRLLPLNDHS---DKNFFKQTGFRKRSESLSGLQSSVSRSNSAKINLKRNSRSL 158
           ++L F+GR+LPL  HS   D    + T    RSES+   ++ + RS+      K  +  +
Sbjct: 88  DELFFKGRILPLR-HSVSLDAGLNEPTRLITRSESVEFRRTGIIRSDR-----KIKNNFI 147

Query: 159 DYRKLYRQSDSIFSPTVEFDRKFPIKSGFKADPMNKKPSSKPRWYFLMFGMVKFPAEMEL 218
           DY        S  SP  +  R   + +   +    + P S   W FL  G+V+ P E+EL
Sbjct: 148 DY--------SQPSPQPQIRRSSSMTARVNS---IRNPKSSSIWDFLRLGLVRTP-EIEL 207

Query: 219 SDIKSR---QVRRRPSAVFTANESKG-KFPCNRSSSEAAWRILRALSCKNHVSVDVR 260
                     V R  S   T+  S   K     S S    R      CK  VS + +
Sbjct: 208 RTTAGNAKLSVSRNSSCSSTSTSSNSKKIGSGESRSRNRRRSFMFSDCKCSVSTETK 245

The following BLAST results are available for this feature:

BLAST of Sed0018084.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023388.1	1.1e-91	70.65	hypothetical protein SDJN02_14413 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022921809.1	2.4e-91	70.65	uncharacterized protein LOC111429953 [Cucurbita moschata]	[more]
XP_023516073.1	1.2e-90	70.04	uncharacterized protein LOC111780044 [Cucurbita pepo subsp. pepo]	[more]
KAG6589708.1	2.6e-90	70.44	hypothetical protein SDJN03_15131, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038879756.1	4.4e-90	71.00	uncharacterized protein LOC120071507 [Benincasa hispida] >XP_038879758.1 unchara...	[more]

BLAST of Sed0018084.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0018084.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1L2	1.1e-91	70.65	uncharacterized protein LOC111429953 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JAL3	2.8e-90	70.29	uncharacterized protein LOC111485063 OS=Cucurbita maxima OX=3661 GN=LOC111485063...	[more]
A0A5A7UVS6	1.7e-87	69.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BW36	1.7e-87	69.14	uncharacterized protein LOC103494265 OS=Cucumis melo OX=3656 GN=LOC103494265 PE=...	[more]
A0A5D3CL04	7.2e-86	68.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Sed0018084.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30230.1	3.9e-28	38.84	unknown protein; Has 42 Blast hits to 42 proteins in 5 species: Archae - 0; Bact...	[more]
AT5G67350.1	2.1e-05	29.54	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..67
None	No IPR available	PANTHER	PTHR34130	FAMILY NOT NAMED	coord: 26..262
None	No IPR available	PANTHER	PTHR34130:SF3	OS08G0243800 PROTEIN	coord: 26..262

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0018084	Sed0018084	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018084.1-exon	Sed0018084.1-exon-LG08:3157151..3158301	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018084.1-three_prime_utr	Sed0018084.1-three_prime_utr-LG08:3157151..3157424	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018084.1-cds	Sed0018084.1-cds-LG08:3157425..3158219	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0018084.1-five_prime_utr	Sed0018084.1-five_prime_utr-LG08:3158220..3158301	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0018084.1	Sed0018084.1-protein	polypeptide