Sed0009718.1 (mRNA) Chayote v1

Overview


Name	Sed0009718.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	Protein of unknown function, DUF538
Location	LG05: 9626116 .. 9629386 (-)
Sequence length	1369
RNA-Seq Expression	Sed0009718.1
Synteny	Sed0009718.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGAATGAGAACGTTCGTAAAATCTTGATCAACAAGATTTCTCTTGTGATCTCCGAAATTTCCCTAATCTCACACCGCCGTTTCTCACAAACCGAATCCGTCTTTGAAAGCTGAAACAATCTTTCAGTTCAGTTCTACTTTCCTCAACCATGGCGCCGAACCCTAAATCTCATCTGGGTGTAATCTTTTTCACCCTCTTCGTCTTCTCGGCCTCCATTCCTTCGCTTGCTGTGGCAGCATCGGAAGCTTCCACCGTCTACGACATCCTCTCCCAGCACGGCCTTCCGATTGGCCTCTTGCCGGACTCCGTCGTTGACTTCTCCCTCTCCTCCGACGGCCGATTTCTCGTTCGTTTGGCCAAACCCTGTTACATCAACTTCGATTACTTGGTTTACTACGACACCACCATCACTGGGAACCTCAATCGCGGCTCCATCACTCATCTCGACGGCATCCAGGTCCAGAAATTGTTTGTCTGGCTCCATGTCGAGGAGATCAGAGTCGATTTCCCGCCTTCTGATAGCATCTACTTCCAAGTTGGGATTATCAACAAGAAGCTTGGGATCGATCAGTTTAAGACGGTGCACTCTTGCCGGAACAATGGTTTGGGCTCTTGCTGGAAACGGATTCTTGAGGTATTCTCAAGATTTTCCTGTTTTTGATTTTTGGGGTTTTAAGCTTGTTTTAACTCATGGGTATTGGTTAGTTATCTCTCTGCTTTGTTCGTTTGATACTTTTGTTGTTCTTCCTTTCGATGTTATGCTCAAGAAATGTGATGGATTCTGTGAACTTGAAAGAAATCTTTGCTATTACAATATGATGGCTTGTATGAACTCTACTGTCGGAAGAAACCCTGTTCGGGTGAATTTAGAAATTTGAACTTTGTTCTGATTTTTTTTTTTTTTTTTTTTTTTGGTTTCATATGTTGAGGATTGGTTTTGAGATGCCACATACTATGTAGTCTGTATGGTATCTGAGCTCATTAAGGTATTAAGTCCAATAAAAATAAAATTGGGATTCGATCCAAGATGGGTGAACTCCTCAAGGCCATGTTGAAGATCCAAAACTCCTAGCATATATGAGATAGATGAGCTACTTCTCTCCTTGTCAATTGATTTTGAGCCGGAACCCATATTATCTTATATCATACCCCACAATGAATATTATATCTGTTTCTGAAGTGCTGGTGTTTGGTGAGTGCATCATTCTTTGTCTTGAAGTTATCATCGTGCAAGGCGGCCTTTGGCATGAAGTTATCATCATGTAGGAAGAGTATTGGATTTTCTTTTTTAAGCAAATGTTTCAGCCTAAGTTTTAGTCGTGTGTTGTTTAATTGAAATTATTAGCTAAGTGCAAGTGTTCTTTAGAGCTGACAATTGTACATAAGTTTTTATGGAGAAAATTGTTTGCTTAATTTTTAAATTGGGAATGAACGAATTTATTAACCACAAGGGAAAGGATATACAAAACGGAGAAGGGATATCCCCAAACGGCCAAGGGAACAAAAAGGGAGAAAATTGTTTGGTTATGATTCATGATGTTCGATGGCTTTGGTCCAATTTTATAGACCAAAACCATTTGGAAGCATTTGGAGTGTCTATCCCTTTTGAATTCATTTTCTATCTAAGATGACTAACCTCTGAACAATAATCTGGACCCTGAGGATCCTCGCCCCTCATTTTACGTGCTTATCGTAAATGTTCTGATATGATAGTTTGACTTTGTAAGTGTTTTATTAGTTTGTTACCTTCGTATGAAGAAAATAAAGAATAGAGCTGAAACTGGCTGATTTGGGCTCTGACCTCGTTGATTCAATTAAGTCTTGGTCTTGGTGTGTTTAGTTAGTGGTCATTCATTCAGATAGTGTAATGTTTTATTTGTTTGTGATATTAGAACTTGAAATATTCCACATCTTTGTAGAGTTTGAATTATATTTCATGGTTATTGGACTGCAGCAATCATATATTCTTATTCAGGACATGTACATGTTCAGTTAACAGGTGACCAAATTAAGCTAAATTGCCTTTATTTTGTCACCTCTACTGTATTACATCAGTCAAACGTTACCAAGACTTGAAGCTGAGTCTATTTGCCATCATCACCACCTATTTTATAGTTTCAAATTGTGCTGCTGTGTTTTTCTAATAAAATGGGTATTATTTTGATCGATTAATATTCCAATTTGCTAGTCTCAATGATTCTCGTTCTTTACGTTTCTTAGCTGCTTGGATTTGGATTAACTCATTGCCCTTGACCTCTCTGTTTCTCTCACTTATTATTGCTTGCTGCTAATTTGCTTGATCACATTGGAACTTCTCGAAGTTGTTGCTGTTATTTGTATAGGTCTTTGGCATTAGCTACTTGCTTATCCATGGGTCAAGATATGCTCTGTCACAGAGTTGCTTTGTTTTTTAAAGTAGATTAGGAACCAATATGATTTGCTATGCTAAAAAATGTTAACTCTAAGTTAAAAGTACAAAGTGAGTATGTTGGAGATTGATTTTATGATGCTAATACTTTTTCTTCGGTGCTCACAGCTTCCGGCGCCAGTAGTTGATGTTCCGATGCTCATCACCGAGTAGCTCTTCATCACTTGTCCGAGTTTTTGAAGTTCTTCTTGCTGCATTATCCAAATGGGAAGGAGAAGAGTAAGAAGTTTAGTAGTTTTTAGGCATCTGGTCTCAGTTTAGACGCCAAAATATCAATGTCTATGTTAGAAGACCTATGATACGACTATGATGCTATGTTAATTTTAGAAGAGCCTTCTGTTTGATCCTCAGAAAAATGCCTTAAACATTGGCATTTGAGGAGCTATAAAAGCTCAATGAATATGGATGTTGTGATATTAAATAGTATGAAGTTTCTCGCGTTATATATTATGTTGCTATCCATCGAAAATGATTAAAGATCACCGAGGTAATGCTCAATTGTAATGAATCAAGGCTAGGATAGAGAATCTTATATCTCTTAATATCTTATTCAATTGTCTTTTGTTTCGTAGATTCTTTCAATTGTGTTCTTGAAAGAGTTGGTGATGTTTCATCTTTTTGGAGATTGAAATTTCTTTCAAAACCAATGGAATGAGGAATTGGAGATGATGAGCGTAAGGATTTGTAGGATGTACTTTTTGAAAGATAAAATAAACATTTGTAACCAACTTCAAAATTGTAGTATGTATTTGGCTTGTGTATCTTTTTTTTTTTAAATCATTTGGCTTGTGTATCTAAATTTGTATGTTTGTCTGTCTTATTATTATTATTATTTTGAGG

mRNA sequence

ATTTGAATGAGAACGTTCGTAAAATCTTGATCAACAAGATTTCTCTTGTGATCTCCGAAATTTCCCTAATCTCACACCGCCGTTTCTCACAAACCGAATCCGTCTTTGAAAGCTGAAACAATCTTTCAGTTCAGTTCTACTTTCCTCAACCATGGCGCCGAACCCTAAATCTCATCTGGGTGTAATCTTTTTCACCCTCTTCGTCTTCTCGGCCTCCATTCCTTCGCTTGCTGTGGCAGCATCGGAAGCTTCCACCGTCTACGACATCCTCTCCCAGCACGGCCTTCCGATTGGCCTCTTGCCGGACTCCGTCGTTGACTTCTCCCTCTCCTCCGACGGCCGATTTCTCGTTCGTTTGGCCAAACCCTGTTACATCAACTTCGATTACTTGGTTTACTACGACACCACCATCACTGGGAACCTCAATCGCGGCTCCATCACTCATCTCGACGGCATCCAGGTCCAGAAATTGTTTGTCTGGCTCCATGTCGAGGAGATCAGAGTCGATTTCCCGCCTTCTGATAGCATCTACTTCCAAGTTGGGATTATCAACAAGAAGCTTGGGATCGATCAGTTTAAGACGGTGCACTCTTGCCGGAACAATGGTTTGGGCTCTTGCTGGAAACGGATTCTTGAGCTTCCGGCGCCAGTAGTTGATGTTCCGATGCTCATCACCGAGTAGCTCTTCATCACTTGTCCGAGTTTTTGAAGTTCTTCTTGCTGCATTATCCAAATGGGAAGGAGAAGAGTAAGAAGTTTAGTAGTTTTTAGGCATCTGGTCTCAGTTTAGACGCCAAAATATCAATGTCTATGTTAGAAGACCTATGATACGACTATGATGCTATGTTAATTTTAGAAGAGCCTTCTGTTTGATCCTCAGAAAAATGCCTTAAACATTGGCATTTGAGGAGCTATAAAAGCTCAATGAATATGGATGTTGTGATATTAAATAGTATGAAGTTTCTCGCGTTATATATTATGTTGCTATCCATCGAAAATGATTAAAGATCACCGAGGTAATGCTCAATTGTAATGAATCAAGGCTAGGATAGAGAATCTTATATCTCTTAATATCTTATTCAATTGTCTTTTGTTTCGTAGATTCTTTCAATTGTGTTCTTGAAAGAGTTGGTGATGTTTCATCTTTTTGGAGATTGAAATTTCTTTCAAAACCAATGGAATGAGGAATTGGAGATGATGAGCGTAAGGATTTGTAGGATGTACTTTTTGAAAGATAAAATAAACATTTGTAACCAACTTCAAAATTGTAGTATGTATTTGGCTTGTGTATCTTTTTTTTTTTAAATCATTTGGCTTGTGTATCTAAATTTGTATGTTTGTCTGTCTTATTATTATTATTATTTTGAGG

Coding sequence (CDS)

ATGGCGCCGAACCCTAAATCTCATCTGGGTGTAATCTTTTTCACCCTCTTCGTCTTCTCGGCCTCCATTCCTTCGCTTGCTGTGGCAGCATCGGAAGCTTCCACCGTCTACGACATCCTCTCCCAGCACGGCCTTCCGATTGGCCTCTTGCCGGACTCCGTCGTTGACTTCTCCCTCTCCTCCGACGGCCGATTTCTCGTTCGTTTGGCCAAACCCTGTTACATCAACTTCGATTACTTGGTTTACTACGACACCACCATCACTGGGAACCTCAATCGCGGCTCCATCACTCATCTCGACGGCATCCAGGTCCAGAAATTGTTTGTCTGGCTCCATGTCGAGGAGATCAGAGTCGATTTCCCGCCTTCTGATAGCATCTACTTCCAAGTTGGGATTATCAACAAGAAGCTTGGGATCGATCAGTTTAAGACGGTGCACTCTTGCCGGAACAATGGTTTGGGCTCTTGCTGGAAACGGATTCTTGAGCTTCCGGCGCCAGTAGTTGATGTTCCGATGCTCATCACCGAGTAG

Protein sequence

MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSSDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSCWKRILELPAPVVDVPMLITE

Homology

[Close]

BLAST of Sed0009718.1 vs. NCBI nr
Match: XP_023534241.1 (uncharacterized protein LOC111795861 [Cucurbita pepo subsp. pepo] >KAG7035822.1 hypothetical protein SDJN02_02621 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 137/179 (76.54%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 1   MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLS 60
           MAP PKSHLGV+FFT   F ASIP LAVA S+A TVYDIL Q+GLP GLLPDSVVD+SLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDF 120
           SDG+F+V LAKPCYINFDYLVYYD TITG L  GSIT LDGI+V+K  +WL V+EIRVD 
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PPSD+IYFQVG INKKL IDQFKTVHSCR++GLG C   WKRILELP PV DVPML+TE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 179

[Close]

BLAST of Sed0009718.1 vs. NCBI nr
Match: XP_022958129.1 (uncharacterized protein LOC111459451 [Cucurbita moschata])

HSP 1 Score: 281.2 bits (718), Expect = 6.2e-72
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLS 60
           MAP PKSHLGV+FFT   F ASIP LAVA S+A TVYDIL Q+GLP GLLPDSVVD+SLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDF 120
           SDG+F+V LAKPCYINFDYLVYYD TITG L  GSI  LDGI+V+K  +WL V+EIRVD 
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSIIDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PPSD+IYFQVG INKKL IDQFKTVHSCR++GLG C   WKRILELP PV DVPML+TE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 179

[Close]

BLAST of Sed0009718.1 vs. NCBI nr
Match: XP_022995949.1 (uncharacterized protein LOC111491311 [Cucurbita maxima])

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLS 60
           MAP PKSHLGVIFFT   F ASI  LAVA S+A TVYDIL Q+GLP GLLPDSVVD+SLS
Sbjct: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDF 120
           SDG+F+V LAKPCYINFDYLVYYD TITG L  GSIT LDGI+V+K  +WL V+EIRVD 
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PPSD+IYFQVG INKKL IDQFKTVHSCR++GLGSC   WKRILELP PV D+ ML+TE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 179

[Close]

BLAST of Sed0009718.1 vs. NCBI nr
Match: KAG6605871.1 (hypothetical protein SDJN03_03188, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 278.5 bits (711), Expect = 4.0e-71
Identity = 135/176 (76.70%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLS 60
           MAP PKSHLGV+FFT   F ASIP LAVA S+A TVYDIL Q+GLP GLLPDSVVD+SLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDF 120
           SDG+F+V LAKPCYINFDYLVYYD TITG L  GSIT LDGI+V+K  +WL V+EIRVD 
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPML 174
           PPSD+IYFQVG INKKL IDQFKTVHSCR++GLG C   WKRILELP PV DVPML
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPML 176

[Close]

BLAST of Sed0009718.1 vs. NCBI nr
Match: XP_022943981.1 (uncharacterized protein LOC111448547 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 5.8e-70
Identity = 129/178 (72.47%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 2   APNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSS 61
           AP   SHLGVIFFT FVF A++PS++VAA +A TVYDIL+Q+GLP GLLPDSV+D++LSS
Sbjct: 3   APTTNSHLGVIFFTSFVFLATLPSVSVAAPDAPTVYDILTQYGLPSGLLPDSVIDYTLSS 62

Query: 62  DGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFP 121
           DG+F+V LAKPCY+ FDYLVYY  TITG L  GSITHLDGI+VQKLF+W  V+EIRVD P
Sbjct: 63  DGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLP 122

Query: 122 PSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PSD+IYFQVG INKKL  DQFK+VHSC++NGLGSC   WKRILELP P+ D+ MLITE
Sbjct: 123 PSDNIYFQVGFINKKLDADQFKSVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 180

[Close]

BLAST of Sed0009718.1 vs. ExPASy TrEMBL
Match: A0A6J1H471 (uncharacterized protein LOC111459451 OS=Cucurbita moschata OX=3662 GN=LOC111459451 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.0e-72
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLS 60
           MAP PKSHLGV+FFT   F ASIP LAVA S+A TVYDIL Q+GLP GLLPDSVVD+SLS
Sbjct: 1   MAPTPKSHLGVVFFTFIAFLASIPELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDF 120
           SDG+F+V LAKPCYINFDYLVYYD TITG L  GSI  LDGI+V+K  +WL V+EIRVD 
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSIIDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PPSD+IYFQVG INKKL IDQFKTVHSCR++GLG C   WKRILELP PV DVPML+TE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGYCLDSWKRILELPTPVDDVPMLVTE 179

[Close]

BLAST of Sed0009718.1 vs. ExPASy TrEMBL
Match: A0A6J1K7B4 (uncharacterized protein LOC111491311 OS=Cucurbita maxima OX=3661 GN=LOC111491311 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 8.7e-72
Identity = 136/179 (75.98%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAPNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLS 60
           MAP PKSHLGVIFFT   F ASI  LAVA S+A TVYDIL Q+GLP GLLPDSVVD+SLS
Sbjct: 1   MAPTPKSHLGVIFFTFIAFLASISELAVAGSDAPTVYDILPQYGLPSGLLPDSVVDYSLS 60

Query: 61  SDGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDF 120
           SDG+F+V LAKPCYINFDYLVYYD TITG L  GSIT LDGI+V+K  +WL V+EIRVD 
Sbjct: 61  SDGQFVVHLAKPCYINFDYLVYYDKTITGKLKYGSITDLDGIEVRKFLMWLDVKEIRVDL 120

Query: 121 PPSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PPSD+IYFQVG INKKL IDQFKTVHSCR++GLGSC   WKRILELP PV D+ ML+TE
Sbjct: 121 PPSDNIYFQVGFINKKLDIDQFKTVHSCRDDGLGSCLDSWKRILELPTPVDDIQMLVTE 179

[Close]

BLAST of Sed0009718.1 vs. ExPASy TrEMBL
Match: A0A6J1FT68 (uncharacterized protein LOC111448547 OS=Cucurbita moschata OX=3662 GN=LOC111448547 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.8e-70
Identity = 129/178 (72.47%), Postives = 151/178 (84.83%), Query Frame = 0


Query: 2   APNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSS 61
           AP   SHLGVIFFT FVF A++PS++VAA +A TVYDIL+Q+GLP GLLPDSV+D++LSS
Sbjct: 3   APTTNSHLGVIFFTSFVFLATLPSVSVAAPDAPTVYDILTQYGLPSGLLPDSVIDYTLSS 62

Query: 62  DGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFP 121
           DG+F+V LAKPCY+ FDYLVYY  TITG L  GSITHLDGI+VQKLF+W  V+EIRVD P
Sbjct: 63  DGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLP 122

Query: 122 PSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PSD+IYFQVG INKKL  DQFK+VHSC++NGLGSC   WKRILELP P+ D+ MLITE
Sbjct: 123 PSDNIYFQVGFINKKLDADQFKSVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 180

[Close]

BLAST of Sed0009718.1 vs. ExPASy TrEMBL
Match: A0A6J1JH99 (uncharacterized protein LOC111484366 OS=Cucurbita maxima OX=3661 GN=LOC111484366 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69
Identity = 129/178 (72.47%), Postives = 148/178 (83.15%), Query Frame = 0


Query: 2   APNPKSHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSS 61
           AP   SHLGVIFFT FVF A++PS+ VAA +A TVYDIL Q+GLP GLLPDSV+D++LSS
Sbjct: 3   APTTNSHLGVIFFTSFVFLAALPSVPVAAPDAPTVYDILPQYGLPSGLLPDSVIDYTLSS 62

Query: 62  DGRFLVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFP 121
           DG+F+V LAKPCY+ FDYLVYY  TITG L  GSITHLDGI+VQKLF+W  V+EIRVD P
Sbjct: 63  DGQFVVHLAKPCYVEFDYLVYYHNTITGKLQYGSITHLDGIEVQKLFLWFDVKEIRVDLP 122

Query: 122 PSDSIYFQVGIINKKLGIDQFKTVHSCRNNGLGSC---WKRILELPAPVVDVPMLITE 177
           PS +IYFQVG INKKL  DQFKTVHSC++NGLGSC   WKRILELP P+ D+ MLITE
Sbjct: 123 PSHNIYFQVGFINKKLDADQFKTVHSCQDNGLGSCLASWKRILELPTPIDDIQMLITE 180

[Close]

BLAST of Sed0009718.1 vs. ExPASy TrEMBL
Match: A0A0A0KX35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280550 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.0e-64
Identity = 122/173 (70.52%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 7   SHLGVIFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSSDGRFL 66
           SHLG+IFFT FVF  SIPSL+ A S+A TVYD+L ++GLP GLLPDSV+D++LSSDG+F+
Sbjct: 4   SHLGLIFFTFFVFLTSIPSLSAAGSDAPTVYDVLPKYGLPSGLLPDSVLDYTLSSDGQFV 63

Query: 67  VRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDSI 126
           V LAKPCYI+FDYLVYY  TITG L  GSIT LDGI+VQKLF+W  V+EIRVD PPSD+I
Sbjct: 64  VHLAKPCYIHFDYLVYYHKTITGKLEYGSITDLDGIEVQKLFLWFDVKEIRVDLPPSDNI 123

Query: 127 YFQVGIINKKLGIDQFKTVHSCRNNGLGS---CWKRILELPAPVVDVPMLITE 177
           YFQVG INKKL IDQFKT+HSC++N L +    WKRILELP P+ D+ MLITE
Sbjct: 124 YFQVGFINKKLDIDQFKTIHSCQDNALATSLGSWKRILELPPPIGDIQMLITE 176

[Close]

BLAST of Sed0009718.1 vs. TAIR 10
Match: AT5G19860.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 193.0 bits (489), Expect = 2.1e-49
Identity = 98/174 (56.32%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 9   LGVIFFTLFVFSASIPSLAVAASEA-STVYDILSQHGLPIGLLPDSVVDFSLSSDGRFLV 68
           + +  F+L +F+ +  SL     ++ STVY++L ++GLP GLLPD+V DF+LS DGRF+V
Sbjct: 8   ISIFIFSLTLFTTTTHSLNEPDPDSISTVYELLPKYGLPSGLLPDTVTDFTLSDDGRFVV 67

Query: 69  RLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDSIY 128
            L   C I FDYLV+YD TI+G +  GSIT L GIQV+K F+WL V+EI+VD PPSDSIY
Sbjct: 68  HLPNSCEIEFDYLVHYDKTISGRIGYGSITELKGIQVKKFFIWLDVDEIKVDLPPSDSIY 127

Query: 129 FQVGIINKKLGIDQFKTVHSCRNNGL-GSC---WKRILELPAPVVD-VPMLITE 177
           F+VG INKKL IDQFKT+HSC +NG+ GSC   WK  LE    ++D   MLITE
Sbjct: 128 FKVGFINKKLDIDQFKTIHSCHDNGVSGSCGDSWKSFLEKGQGMMDEAEMLITE 181

[Close]

BLAST of Sed0009718.1 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24
Identity = 49/129 (37.98%), Postives = 81/129 (62.79%), Query Frame = 0


Query: 25  SLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSSDGRFLVRLAKPCYINFDYLVYYD 84
           SL++++    TV+D+L   GLP GLLP  V  + L +DGR  V LA PCY  F+  V+++
Sbjct: 18  SLSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAKFETNVHFE 77

Query: 85  TTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDSIYFQVGIINKKLGIDQFKT 144
             + GNL+ GS+  ++G+  ++LF+WL V++I V+ P S  I F +G+  K+L +  F+ 
Sbjct: 78  AVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQLSLSLFED 137

Query: 145 VHSCRNNGL 154
              C+ +G+
Sbjct: 138 PPKCKPDGV 146

[Close]

BLAST of Sed0009718.1 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-23
Identity = 55/138 (39.86%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 12  IFFTLFVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSSD-GRFLVRLA 71
           I F   V  A I S++ A SE  T+Y+IL  +GLP G+ P  V +F+   + GRF V L 
Sbjct: 8   IAFLCLVLVAGI-SISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLN 67

Query: 72  KPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDSIYFQV 131
           + C   ++  ++YD  ITG +    I+ L GI  Q+LF+W  V+ IRVD P S  IYF V
Sbjct: 68  QACEAKYETEIHYDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDV 127

Query: 132 GIINKKLGIDQFKTVHSC 149
           G++ K+  +  F+T   C
Sbjct: 128 GVVRKQYSLSLFETPRDC 144

[Close]

BLAST of Sed0009718.1 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21
Identity = 52/143 (36.36%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 9   LGVIFFTL--FVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSSD-GRF 68
           L ++  TL  FV +A I S++   +E  ++ +IL  +GLP+GL P  V  F+++ + GRF
Sbjct: 2   LRIVQITLLCFVLAAGI-SISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRF 61

Query: 69  LVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDS 128
            V L + C   ++  ++YD  ++G +    I  L GI  Q+LF+WL V+ IRVD P S  
Sbjct: 62  SVYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL 121

Query: 129 IYFQVGIINKKLGIDQFKTVHSC 149
           I+F VG++ K+  +  F+T   C
Sbjct: 122 IFFDVGVLRKQYSLSLFETPRDC 143

[Close]

BLAST of Sed0009718.1 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 99.0 bits (245), Expect = 4.1e-21
Identity = 52/143 (36.36%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 9   LGVIFFTL--FVFSASIPSLAVAASEASTVYDILSQHGLPIGLLPDSVVDFSLSSD-GRF 68
           L ++  TL  FV +A I S++   +E  ++ +IL  +GLP+GL P  V  F+++ + GRF
Sbjct: 2   LRIVQITLLCFVLAAGI-SISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRF 61

Query: 69  LVRLAKPCYINFDYLVYYDTTITGNLNRGSITHLDGIQVQKLFVWLHVEEIRVDFPPSDS 128
            V L + C   ++  ++YD  ++G +    I  L GI  Q+LF+WL V+ IRVD P S  
Sbjct: 62  SVYLNQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGL 121

Query: 129 IYFQVGIINKKLGIDQFKTVHSC 149
           I+F VG++ K+  +  F+T   C
Sbjct: 122 IFFDVGVLRKQYSLSLFETPRDC 143

The following BLAST results are available for this feature:

BLAST of Sed0009718.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534241.1	1.3e-72	76.54	uncharacterized protein LOC111795861 [Cucurbita pepo subsp. pepo] >KAG7035822.1 ...	[more]
XP_022958129.1	6.2e-72	75.98	uncharacterized protein LOC111459451 [Cucurbita moschata]	[more]
XP_022995949.1	1.8e-71	75.98	uncharacterized protein LOC111491311 [Cucurbita maxima]	[more]
KAG6605871.1	4.0e-71	76.70	hypothetical protein SDJN03_03188, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022943981.1	5.8e-70	72.47	uncharacterized protein LOC111448547 [Cucurbita moschata]	[more]

BLAST of Sed0009718.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0009718.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H471	3.0e-72	75.98	uncharacterized protein LOC111459451 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A6J1K7B4	8.7e-72	75.98	uncharacterized protein LOC111491311 OS=Cucurbita maxima OX=3661 GN=LOC111491311...	[more]
A0A6J1FT68	2.8e-70	72.47	uncharacterized protein LOC111448547 OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]
A0A6J1JH99	1.8e-69	72.47	uncharacterized protein LOC111484366 OS=Cucurbita maxima OX=3661 GN=LOC111484366...	[more]
A0A0A0KX35	1.0e-64	70.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280550 PE=4 SV=1	[more]

BLAST of Sed0009718.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19860.1	2.1e-49	56.32	Protein of unknown function, DUF538	[more]
AT5G54530.1	5.1e-24	37.98	Protein of unknown function, DUF538	[more]
AT3G07470.1	1.5e-23	39.86	Protein of unknown function, DUF538	[more]
AT3G07460.1	4.1e-21	36.36	Protein of unknown function, DUF538	[more]
AT3G07460.2	4.1e-21	36.36	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 36..143 e-value: 1.9E-30 score: 105.6
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 12..174
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 23..151 e-value: 3.8E-34 score: 119.3
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 11..150
None	No IPR available	PANTHER	PTHR31676:SF149	SUBFAMILY NOT NAMED	coord: 12..174

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0009718	Sed0009718	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009718.1-three_prime_utr	Sed0009718.1-three_prime_utr-LG05:9626116..9626802	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009718.1-exon	Sed0009718.1-exon-LG05:9626116..9626847	exon
Sed0009718.1-exon	Sed0009718.1-exon-LG05:9628750..9629386	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009718.1-cds	Sed0009718.1-cds-LG05:9626803..9626847	CDS
Sed0009718.1-cds	Sed0009718.1-cds-LG05:9628750..9629235	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0009718.1-five_prime_utr	Sed0009718.1-five_prime_utr-LG05:9629236..9629386	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0009718.1	Sed0009718.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane