Sed0000844.1 (mRNA) Chayote v1

Overview


Name	Sed0000844.1
Type	mRNA
Organism	Sechium edule (Chayote v1)
Description	DNA damage-repair/toleration protein DRT100-like
Location	LG05: 10912583 .. 10914373 (+)
Sequence length	1791
RNA-Seq Expression	Sed0000844.1
Synteny	Sed0000844.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCAGTCTGACCCCGACATTTTCATTTATTATTATTTCTTCACAGTTATCTCTAACGGATGGAAATGCGTTTCCCCGCTTTGCTGCTTCTGGCCGTCTTCTCCGCCGTCCACGCCTGCCCGCCCTCGGAACGGGCAGCTCTCATCGCTTTCAAGTCTGCCCTTCAGGAGCGCTATTTGGGAATCTTCAACTCCTGGACCGGAGATGACTGCTGCAACCGATGGTACGGCGTTAGCTGCGACTCGGGTACCCACCGGGTCGCGGATATCAATCTCCGGGGCGAATCGGAGGATCCCATTTTCGAACGGGCTCACCGGACCGGTTACATGACCGGTTATATTTCTCCGGCCATCTGCAAGCTCACTCGCCTCTCCAGCGTCATCATCGCCGACTGGAAGGGCATCACCGGCGAGATTCCCAGGTGTATAACTTCCTTGCCGTTTCTCCGGATTCTCGACCTCATCGGTAACCGTATCTCCGGCGATCTTCCGGCGGATATTGGTCGGCTCCGACGACTCACCGTGCTCAACGTCGCGGACAATTTGATTTCCGGTACGATTCCGGCGTCGATTACTTCGCTTACGAATTTGATGCACTTGGACCTCCGAAACAACAAAATCTCGGGTTCGCTGCCCCGAAATTTCGGGAATATGAGGATGTTGAGCCGGGCTTTACTGAGCCGGAATCAGCTCTCCGGTTACCTTCCGGCTTCCATCGCCAAGATCTACCGGCTGGCGGATCTGGATCTATCTCTGAATCAACTTTCCGGGACAATCCCCGATTGGATCGGTAGATTAGCAGTGTTAGCGACATTGAATCTGGACGGCAACAAATTCTCCGGCAGCATTCCGGCGAGTCTGTTAGTTTCGGGGATAAGCGATTTGAACGTAAGCCGGAACTACTTGACCGGAAGCATACCGGATGCATTCGGGCCGAGATCGTACTTCACAGTGCTGGATTTATCATACAACAACTTGAATGGGTCGATTCCGAAATCGGTATCGGAAGCTTCGTATATCGGGCATTTGGATTTGAGCCACAACCATCTTTGTGGGCCCATTCCGGGCGGAGCGCCGTTCGATCATCTTGAAGCAGCGTCGTTTGTTTACAACGACTGCCTCTGTGGAAAGCCGCTTAAAGCTTGTTAGTTTATGTTTGTTTTATTATTATTATTATTATTATTATTATTATCATGTAAAAGGGTTGATAAAAAAACTTTTTTAAGGTTTTAACTGATTCCATTACTATGGTGATAATAATCAGTGTCAATTGATAGAGAGAGTTTAGTAGTGAGTGCAGAGTGCATGATATTAGATTTTAAAAACAGTGAAACTATATATCATTGCATTATATTTTTTAGTTATATGTTGAAACTACTCTGTTTGTCTTAGTTTTGTCATACGGTTTTTGTTTTTGTTTTAATAATGTATTATACAATTGTATCTAAACCTTTAAGATGAATGTTCGTTTTGAGAGAATAAATTGTTAAAACTTGAAATTATAGGTTTCTGAATTAGTAGTTTTTTTTAGTATAAATTAAGGGAAAGAGGATTATAAATACTCATTAGGGATGGAACATGTGACAATGGAGTGCAAATGGAAATGAATTAGTATCTTTATGAACTATATAAAATGTAAATTTGTTGATTTTAAATTTGATGTGAATAGCGTGTCTTACTAGTTAAATGTTTTCTAAAAATTTGAATTGAAAAAAAATGTAAGTTTGAATTGATAAAATCATTGGATCCCTTTTTTAGAATATTACATCAAACTATAATTTTTTAATCTAAT

mRNA sequence

CTTCAGTCTGACCCCGACATTTTCATTTATTATTATTTCTTCACAGTTATCTCTAACGGATGGAAATGCGTTTCCCCGCTTTGCTGCTTCTGGCCGTCTTCTCCGCCGTCCACGCCTGCCCGCCCTCGGAACGGGCAGCTCTCATCGCTTTCAAGTCTGCCCTTCAGGAGCGCTATTTGGGAATCTTCAACTCCTGGACCGGAGATGACTGCTGCAACCGATGGTACGGCGTTAGCTGCGACTCGGGTACCCACCGGGTCGCGGATATCAATCTCCGGGGCGAATCGGAGGATCCCATTTTCGAACGGGCTCACCGGACCGGTTACATGACCGGTTATATTTCTCCGGCCATCTGCAAGCTCACTCGCCTCTCCAGCGTCATCATCGCCGACTGGAAGGGCATCACCGGCGAGATTCCCAGGTGTATAACTTCCTTGCCGTTTCTCCGGATTCTCGACCTCATCGGTAACCGTATCTCCGGCGATCTTCCGGCGGATATTGGTCGGCTCCGACGACTCACCGTGCTCAACGTCGCGGACAATTTGATTTCCGGTACGATTCCGGCGTCGATTACTTCGCTTACGAATTTGATGCACTTGGACCTCCGAAACAACAAAATCTCGGGTTCGCTGCCCCGAAATTTCGGGAATATGAGGATGTTGAGCCGGGCTTTACTGAGCCGGAATCAGCTCTCCGGTTACCTTCCGGCTTCCATCGCCAAGATCTACCGGCTGGCGGATCTGGATCTATCTCTGAATCAACTTTCCGGGACAATCCCCGATTGGATCGGTAGATTAGCAGTGTTAGCGACATTGAATCTGGACGGCAACAAATTCTCCGGCAGCATTCCGGCGAGTCTGTTAGTTTCGGGGATAAGCGATTTGAACGTAAGCCGGAACTACTTGACCGGAAGCATACCGGATGCATTCGGGCCGAGATCGTACTTCACAGTGCTGGATTTATCATACAACAACTTGAATGGGTCGATTCCGAAATCGGTATCGGAAGCTTCGTATATCGGGCATTTGGATTTGAGCCACAACCATCTTTGTGGGCCCATTCCGGGCGGAGCGCCGTTCGATCATCTTGAAGCAGCGTCGTTTGTTTACAACGACTGCCTCTGTGGAAAGCCGCTTAAAGCTTGTTAGTTTATGTTTGTTTTATTATTATTATTATTATTATTATTATTATCATGTAAAAGGGTTGATAAAAAAACTTTTTTAAGGTTTTAACTGATTCCATTACTATGGTGATAATAATCAGTGTCAATTGATAGAGAGAGTTTAGTAGTGAGTGCAGAGTGCATGATATTAGATTTTAAAAACAGTGAAACTATATATCATTGCATTATATTTTTTAGTTATATGTTGAAACTACTCTGTTTGTCTTAGTTTTGTCATACGGTTTTTGTTTTTGTTTTAATAATGTATTATACAATTGTATCTAAACCTTTAAGATGAATGTTCGTTTTGAGAGAATAAATTGTTAAAACTTGAAATTATAGGTTTCTGAATTAGTAGTTTTTTTTAGTATAAATTAAGGGAAAGAGGATTATAAATACTCATTAGGGATGGAACATGTGACAATGGAGTGCAAATGGAAATGAATTAGTATCTTTATGAACTATATAAAATGTAAATTTGTTGATTTTAAATTTGATGTGAATAGCGTGTCTTACTAGTTAAATGTTTTCTAAAAATTTGAATTGAAAAAAAATGTAAGTTTGAATTGATAAAATCATTGGATCCCTTTTTTAGAATATTACATCAAACTATAATTTTTTAATCTAAT

Coding sequence (CDS)

ATGGAAATGCGTTTCCCCGCTTTGCTGCTTCTGGCCGTCTTCTCCGCCGTCCACGCCTGCCCGCCCTCGGAACGGGCAGCTCTCATCGCTTTCAAGTCTGCCCTTCAGGAGCGCTATTTGGGAATCTTCAACTCCTGGACCGGAGATGACTGCTGCAACCGATGGTACGGCGTTAGCTGCGACTCGGGTACCCACCGGGTCGCGGATATCAATCTCCGGGGCGAATCGGAGGATCCCATTTTCGAACGGGCTCACCGGACCGGTTACATGACCGGTTATATTTCTCCGGCCATCTGCAAGCTCACTCGCCTCTCCAGCGTCATCATCGCCGACTGGAAGGGCATCACCGGCGAGATTCCCAGGTGTATAACTTCCTTGCCGTTTCTCCGGATTCTCGACCTCATCGGTAACCGTATCTCCGGCGATCTTCCGGCGGATATTGGTCGGCTCCGACGACTCACCGTGCTCAACGTCGCGGACAATTTGATTTCCGGTACGATTCCGGCGTCGATTACTTCGCTTACGAATTTGATGCACTTGGACCTCCGAAACAACAAAATCTCGGGTTCGCTGCCCCGAAATTTCGGGAATATGAGGATGTTGAGCCGGGCTTTACTGAGCCGGAATCAGCTCTCCGGTTACCTTCCGGCTTCCATCGCCAAGATCTACCGGCTGGCGGATCTGGATCTATCTCTGAATCAACTTTCCGGGACAATCCCCGATTGGATCGGTAGATTAGCAGTGTTAGCGACATTGAATCTGGACGGCAACAAATTCTCCGGCAGCATTCCGGCGAGTCTGTTAGTTTCGGGGATAAGCGATTTGAACGTAAGCCGGAACTACTTGACCGGAAGCATACCGGATGCATTCGGGCCGAGATCGTACTTCACAGTGCTGGATTTATCATACAACAACTTGAATGGGTCGATTCCGAAATCGGTATCGGAAGCTTCGTATATCGGGCATTTGGATTTGAGCCACAACCATCTTTGTGGGCCCATTCCGGGCGGAGCGCCGTTCGATCATCTTGAAGCAGCGTCGTTTGTTTACAACGACTGCCTCTGTGGAAAGCCGCTTAAAGCTTGTTAG

Protein sequence

MEMRFPALLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLAVLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLNGSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC

Homology

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BLAST of Sed0000844.1 vs. NCBI nr
Match: KAG7010257.1 (DNA damage-repair/toleration protein DRT-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 660.6 bits (1703), Expect = 7.7e-186
Identity = 316/355 (89.01%), Postives = 341/355 (96.06%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++ALQE YLGIFNSWTGDDCCNRWYG+SCDS THRV
Sbjct: 11  LLILAVSSAVHACPPSERAALLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRV 70

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGESEDPIFERAHRTG+MTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLP
Sbjct: 71  ADINLRGESEDPIFERAHRTGFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLP 130

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IPAS+ SL NLMHLDLRNNKI
Sbjct: 131 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPASLASLPNLMHLDLRNNKI 190

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LP+NFGNMRMLSRALLSRNQ+SG LP SI+KIYRLADLDLS+NQL+G IPDWIGR+A
Sbjct: 191 SGPLPQNFGNMRMLSRALLSRNQISGSLPGSISKIYRLADLDLSMNQLTGPIPDWIGRMA 250

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSGSIPAS+LVS ISDLN+SRNYLTG++PD FGPRSYFTVLDLSYNNL 
Sbjct: 251 VLATLNLDGNKFSGSIPASILVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLK 310

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G+IPKSVS+ASYIGH+DLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 311 GAIPKSVSQASYIGHMDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 365

[Close]

BLAST of Sed0000844.1 vs. NCBI nr
Match: XP_023512290.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 659.4 bits (1700), Expect = 1.7e-185
Identity = 315/355 (88.73%), Postives = 341/355 (96.06%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++ALQE YLGIFNSWTGDDCCNRWYG+SCDS THRV
Sbjct: 100 LLILAVSSAVHACPPSERAALLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRV 159

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGESEDPIFERAHRTG+MTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLP
Sbjct: 160 ADINLRGESEDPIFERAHRTGFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLP 219

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IPAS+ SL NLMHLDLRNNKI
Sbjct: 220 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPASLASLPNLMHLDLRNNKI 279

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LP+NFGNMRMLSRALLSRNQ+SG LP SI+KIYRLADLDLS+NQL+G IPDWIGR+A
Sbjct: 280 SGPLPQNFGNMRMLSRALLSRNQISGSLPGSISKIYRLADLDLSMNQLTGPIPDWIGRMA 339

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSG+IPAS+LVS ISDLN+SRNYLTG++PD FGPRSYFTVLDLSYNNL 
Sbjct: 340 VLATLNLDGNKFSGNIPASILVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLK 399

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G+IPKSVS+ASYIGH+DLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 400 GAIPKSVSQASYIGHMDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 454

[Close]

BLAST of Sed0000844.1 vs. NCBI nr
Match: XP_022944117.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita moschata])

HSP 1 Score: 658.3 bits (1697), Expect = 3.8e-185
Identity = 314/355 (88.45%), Postives = 341/355 (96.06%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++ALQE YLGIFNSWTGDDCCNRWYG+SCDS THRV
Sbjct: 136 LLILAVSSAVHACPPSERAALLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRV 195

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGESEDPIFERAHRTG+MTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLP
Sbjct: 196 ADINLRGESEDPIFERAHRTGFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLP 255

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IPAS+ S+ NLMHLDLRNNKI
Sbjct: 256 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPASLASIPNLMHLDLRNNKI 315

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LP+NFGNMRMLSRALLSRNQ+SG LP SI+KIYRLADLDLS+NQL+G IP+WIGR+A
Sbjct: 316 SGPLPQNFGNMRMLSRALLSRNQISGSLPGSISKIYRLADLDLSMNQLTGPIPEWIGRMA 375

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSGSIPAS+LVS ISDLN+SRNYLTG++PD FGPRSYFTVLDLSYNNL 
Sbjct: 376 VLATLNLDGNKFSGSIPASILVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLK 435

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G+IPKSVS+ASYIGH+DLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 436 GAIPKSVSQASYIGHMDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 490

[Close]

BLAST of Sed0000844.1 vs. NCBI nr
Match: KAG6570381.1 (DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 658.3 bits (1697), Expect = 3.8e-185
Identity = 315/355 (88.73%), Postives = 340/355 (95.77%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++ALQE YLGIFNSWTGDDCCNRWYG+SCDS THRV
Sbjct: 11  LLILAVSSAVHACPPSERAALLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRV 70

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGESEDPIFERAHRTG+MTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLP
Sbjct: 71  ADINLRGESEDPIFERAHRTGFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLP 130

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IPAS+ SL NLMHLDLRNNKI
Sbjct: 131 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPASLASLPNLMHLDLRNNKI 190

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LP+NFGNMRMLSRALLSRNQ+SG LP SI+KIYRLADLDLS+NQL+G IPDWIGR+A
Sbjct: 191 SGPLPQNFGNMRMLSRALLSRNQISGSLPGSISKIYRLADLDLSMNQLTGPIPDWIGRMA 250

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNK SGSIPAS+LVS ISDLN+SRNYLTG++PD FGPRSYFTVLDLSYNNL 
Sbjct: 251 VLATLNLDGNKLSGSIPASILVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLK 310

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G+IPKSVS+ASYIGH+DLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 311 GAIPKSVSQASYIGHMDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 365

[Close]

BLAST of Sed0000844.1 vs. NCBI nr
Match: XP_038902030.1 (DNA damage-repair/toleration protein DRT100-like [Benincasa hispida])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 317/357 (88.80%), Postives = 338/357 (94.68%), Query Frame = 0


Query: 6   PALLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTH 65
           P LL+LAVFSAVHACPPSERAAL+AF++AL E YLGIFNSWTGDDCCNRW+G+SCD  TH
Sbjct: 9   PILLILAVFSAVHACPPSERAALLAFRAALHEPYLGIFNSWTGDDCCNRWHGISCDQVTH 68

Query: 66  RVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITS 125
           RVADINLRGE+EDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITS
Sbjct: 69  RVADINLRGEAEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITS 128

Query: 126 LPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNN 185
           LPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISG+IPAS+T+L NLMHLDLRNN
Sbjct: 129 LPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGSIPASLTALPNLMHLDLRNN 188

Query: 186 KISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGR 245
           KISG LPRNFGN+RMLSRALLSRNQ+SG LP SI+KIYRLADLDLS NQLSG IP WIGR
Sbjct: 189 KISGPLPRNFGNLRMLSRALLSRNQISGSLPDSISKIYRLADLDLSQNQLSGVIPSWIGR 248

Query: 246 LAVLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNN 305
           +AVLATLNLDGNKFSGSIP S+LVSGISDLN+SRNYL+G++PD F   SYFTVLDLSYNN
Sbjct: 249 MAVLATLNLDGNKFSGSIPPSILVSGISDLNLSRNYLSGNVPDVFEQSSYFTVLDLSYNN 308

Query: 306 LNGSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           L G+IPKSVSEASYIGHLDLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 309 LKGTIPKSVSEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 365

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BLAST of Sed0000844.1 vs. ExPASy Swiss-Prot
Match: Q00874 (DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 2.2e-119
Identity = 207/355 (58.31%), Postives = 269/355 (75.77%), Query Frame = 0


Query: 7   ALLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWT-GDDCCNRWYGVSCDSGTH 66
           A++ ++V S V  C P ++ AL AFKS+L E  LGIFN+W+   DCC  WYG+SCD  + 
Sbjct: 14  AVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSG 73

Query: 67  RVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITS 126
           RV DI+LRGESED IF++A R+GYM+G I PA+C LT L+S+++ADWKGITGEIP CITS
Sbjct: 74  RVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITS 133

Query: 127 LPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNN 186
           L  LRILDL GN+I+G++PA+IG+L +L VLN+A+N +SG IPAS+TSL  L HL+L  N
Sbjct: 134 LASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTEN 193

Query: 187 KISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGR 246
            I+G +P +FG+++MLSR LL RN+L+G +P SI+ + RLADLDLS N + G IP+W+G 
Sbjct: 194 GITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGN 253

Query: 247 LAVLATLNLDGNKFSGSIPASLLV-SGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYN 306
           + VL+ LNLD N  +G IP SLL  SG+   N+SRN L G+IPD FG ++Y   LDLS+N
Sbjct: 254 MKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHN 313

Query: 307 NLNGSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPL 360
           +L+G IP S+S A ++GHLD+SHN LCG IP G PFDHLEA SF  N CLCG PL
Sbjct: 314 SLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368

[Close]

BLAST of Sed0000844.1 vs. ExPASy Swiss-Prot
Match: F4J8G2 (Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.1e-41
Identity = 111/344 (32.27%), Postives = 175/344 (50.87%), Query Frame = 0


Query: 17  VHACPPSERAALIAFKS--ALQERYLGI-----FNSW-TGDDCCNRWYGVSCDSGTHRVA 76
           +H C   +R AL+ FK+   +++   G        SW  G DCC+ W G++CD+ T  V 
Sbjct: 27  IHLCHFEQRDALLEFKNEFKIKKPCFGCPSPLKTKSWENGSDCCH-WDGITCDAKTGEVI 86

Query: 77  DINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPF 136
           +I+L        F        +  +            + +   +  ++G+I   I +L  
Sbjct: 87  EIDLMCSCLHGWFHSNSNLSMLQNF---------HFLTTLDLSYNHLSGQISSSIGNLSH 146

Query: 137 LRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKIS 196
           L  LDL GN  SG +P+ +G L  LT L++ DN   G IP+S+ +L+ L  LDL  N   
Sbjct: 147 LTTLDLSGNNFSGWIPSSLGNLFHLTSLHLYDNNFGGEIPSSLGNLSYLTFLDLSTNNFV 206

Query: 197 GSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLAV 256
           G +P +FG++  LS   L  N+LSG LP  +  + +L+++ LS NQ +GT+P  I  L++
Sbjct: 207 GEIPSSFGSLNQLSILRLDNNKLSGNLPLEVINLTKLSEISLSHNQFTGTLPPNITSLSI 266

Query: 257 LATLNLDGNKFSGSIPASLL-VSGISDLNVSRNYLTGSIP-DAFGPRSYFTVLDLSYNNL 316
           L + +  GN F G+IP+SL  +  I+ + +  N L+G++        S   VL L  NNL
Sbjct: 267 LESFSASGNNFVGTIPSSLFTIPSITLIFLDNNQLSGTLEFGNISSPSNLLVLQLGGNNL 326

Query: 317 NGSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVY 351
            G IP S+S    +  LDLSH ++ G +     F HL+    +Y
Sbjct: 327 RGPIPTSISRLVNLRTLDLSHFNIQGQVDFNI-FSHLKLLGNLY 359

[Close]

BLAST of Sed0000844.1 vs. ExPASy Swiss-Prot
Match: Q69SP5 (LRR receptor-like serine/threonine-protein kinase ER1 OS=Oryza sativa subsp. japonica OX=39947 GN=ER1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-40
Identity = 112/329 (34.04%), Postives = 166/329 (50.46%), Query Frame = 0


Query: 7   ALLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHR 66
           ALLL+AV  A       + + L+  K + +     +   W G D C+ W GV CD+ T  
Sbjct: 15  ALLLVAVAVA------DDGSTLLEIKKSFR-NVDNVLYDWAGGDYCS-WRGVLCDNVTFA 74

Query: 67  VADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSL 126
           VA +NL G +             + G ISPA+ +L  + S+ +    G++G+IP  I   
Sbjct: 75  VAALNLSGLN-------------LGGEISPAVGRLKGIVSIDLKS-NGLSGQIPDEIGDC 134

Query: 127 PFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNK 186
             L+ LDL  N + GD+P  + +L+ +  L + +N + G IP++++ L NL  LDL  NK
Sbjct: 135 SSLKTLDLSFNSLDGDIPFSVSKLKHIESLILKNNQLIGVIPSTLSQLPNLKILDLAQNK 194

Query: 187 ISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRL 246
           +SG +PR      +L    L  N L G +   I ++  L   D+  N L+G IP+ IG  
Sbjct: 195 LSGEIPRLIYWNEVLQYLGLRGNNLEGSISPDICQLTGLWYFDVKNNSLTGPIPETIGNC 254

Query: 247 AVLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNL 306
                L+L  NK SGSIP ++    ++ L++  N  TG IP   G      VLDLSYN L
Sbjct: 255 TSFQVLDLSYNKLSGSIPFNIGFLQVATLSLQGNMFTGPIPSVIGLMQALAVLDLSYNQL 314

Query: 307 NGSIPKSVSEASYIGHLDLSHNHLCGPIP 336
           +G IP  +   +Y   L +  N L GPIP
Sbjct: 315 SGPIPSILGNLTYTEKLYMQGNKLTGPIP 321

[Close]

BLAST of Sed0000844.1 vs. ExPASy Swiss-Prot
Match: Q9FL28 (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-40
Identity = 115/335 (34.33%), Postives = 179/335 (53.43%), Query Frame = 0


Query: 64  THRVADINLRGESEDPIFE----RAHRTGY--MTGYISPAICKLTRLSSVIIADWKGITG 123
           T  VAD NL G  +  I +    R  +  Y  +TG I   I  L  L +++     G TG
Sbjct: 459 TLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTGPIPREIGNLKDL-NILYLHSNGFTG 518

Query: 124 EIPRCITSLPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNL 183
            IPR +++L  L+ L +  N + G +P ++  ++ L+VL++++N  SG IPA  + L +L
Sbjct: 519 RIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSKLESL 578

Query: 184 MHLDLRNNKISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLAD--LDLSLNQL 243
            +L L+ NK +GS+P +  ++ +L+   +S N L+G +P  +    +     L+ S N L
Sbjct: 579 TYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLASLKNMQLYLNFSNNLL 638

Query: 244 SGTIPDWIGRLAVLATLNLDGNKFSGSIPASLL--------------VSG---------- 303
           +GTIP  +G+L ++  ++L  N FSGSIP SL               +SG          
Sbjct: 639 TGTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGM 698

Query: 304 --ISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLNGSIPKSVSEASYIGHLDLSHNH 363
             I  LN+SRN  +G IP +FG  ++   LDLS NNL G IP+S++  S + HL L+ N+
Sbjct: 699 DMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNN 758

[Close]

BLAST of Sed0000844.1 vs. ExPASy Swiss-Prot
Match: Q9SCT4 (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana OX=3702 GN=IMK2 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-40
Identity = 98/226 (43.36%), Postives = 138/226 (61.06%), Query Frame = 0


Query: 112 WKGITGEIPRCITSLPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASI 171
           WKG+ G I   I  L  LR L L  N I+G +P  +G L+ L  + + +N +SG+IP S+
Sbjct: 103 WKGLGGTISEKIGQLGSLRKLSLHNNVIAGSVPRSLGYLKSLRGVYLFNNRLSGSIPVSL 162

Query: 172 TSLTNLMHLDLRNNKISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLS 231
            +   L +LDL +N+++G++P +      L R  LS N LSG LP S+A+ Y L  LDL 
Sbjct: 163 GNCPLLQNLDLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQ 222

Query: 232 LNQLSGTIPD-WIGRLAVLATLNLDGNKFSGSIPASLLV-SGISDLNVSRNYLTGSIPDA 291
            N LSG+IPD ++     L TLNLD N+FSG++P SL   S + ++++S N L+GSIP  
Sbjct: 223 HNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRE 282

Query: 292 FGPRSYFTVLDLSYNNLNGSIPKSVSEASYIGHLDLSHNHLCGPIP 336
            G   +   LD SYN++NG+IP S S  S +  L+L  NHL GPIP
Sbjct: 283 CGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIP 328

[Close]

BLAST of Sed0000844.1 vs. ExPASy TrEMBL
Match: A0A6J1FUX0 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 GN=LOC111448666 PE=4 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 1.9e-185
Identity = 314/355 (88.45%), Postives = 341/355 (96.06%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++ALQE YLGIFNSWTGDDCCNRWYG+SCDS THRV
Sbjct: 136 LLILAVSSAVHACPPSERAALLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRV 195

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGESEDPIFERAHRTG+MTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLP
Sbjct: 196 ADINLRGESEDPIFERAHRTGFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLP 255

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IPAS+ S+ NLMHLDLRNNKI
Sbjct: 256 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPASLASIPNLMHLDLRNNKI 315

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LP+NFGNMRMLSRALLSRNQ+SG LP SI+KIYRLADLDLS+NQL+G IP+WIGR+A
Sbjct: 316 SGPLPQNFGNMRMLSRALLSRNQISGSLPGSISKIYRLADLDLSMNQLTGPIPEWIGRMA 375

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSGSIPAS+LVS ISDLN+SRNYLTG++PD FGPRSYFTVLDLSYNNL 
Sbjct: 376 VLATLNLDGNKFSGSIPASILVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLK 435

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G+IPKSVS+ASYIGH+DLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 436 GAIPKSVSQASYIGHMDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 490

[Close]

BLAST of Sed0000844.1 vs. ExPASy TrEMBL
Match: A0A6J1JFH2 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=LOC111484043 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.2e-185
Identity = 314/355 (88.45%), Postives = 339/355 (95.49%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++ALQE YLGIFNSWTGDDCCNRWYG+SCDS THRV
Sbjct: 74  LLILAVSSAVHACPPSERAALLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRV 133

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGESEDPIFERAHRTG+MTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLP
Sbjct: 134 ADINLRGESEDPIFERAHRTGFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLP 193

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IPAS+ SL NLMHLDLRNNKI
Sbjct: 194 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPASLASLPNLMHLDLRNNKI 253

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LP+NFGNMRMLSRALLSRNQ+SG LP SI+KIYRLADLDLS+NQL+G IPDWIGR+A
Sbjct: 254 SGPLPQNFGNMRMLSRALLSRNQISGPLPGSISKIYRLADLDLSMNQLTGPIPDWIGRMA 313

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNK SG IPAS+LVS ISDLN+SRNYLTG++PD FGPRSYFTVLDLSYNNL 
Sbjct: 314 VLATLNLDGNKLSGDIPASVLVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLK 373

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G+IPKSVS+ASYIGH+DLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 374 GAIPKSVSQASYIGHMDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 428

[Close]

BLAST of Sed0000844.1 vs. ExPASy TrEMBL
Match: A0A5A7TIA9 (DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00370 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.7e-183
Identity = 315/355 (88.73%), Postives = 335/355 (94.37%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++AL E YLGIFNSWTGDDCCNRW+G+SCD  THRV
Sbjct: 12  LLILAVSSAVHACPPSERAALLAFRAALHEPYLGIFNSWTGDDCCNRWHGISCDQVTHRV 71

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGE+EDPIFERAHRTGYMTGYISP ICKLTRLSSVIIADWKGITGEIPRCITSLP
Sbjct: 72  ADINLRGEAEDPIFERAHRTGYMTGYISPEICKLTRLSSVIIADWKGITGEIPRCITSLP 131

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IP+S+T+LTNLMHLDLRNNK 
Sbjct: 132 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPSSLTALTNLMHLDLRNNKF 191

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LPRNFGN+RMLSRALLSRNQ SG LP SI+KIYRLADLDLS NQLSG IP WIGR+A
Sbjct: 192 SGRLPRNFGNLRMLSRALLSRNQFSGSLPDSISKIYRLADLDLSQNQLSGVIPSWIGRMA 251

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSGSIP S+LVSGISDLN+SRNYLTG++PD FG RSYFTVLDLSYNNL 
Sbjct: 252 VLATLNLDGNKFSGSIPPSILVSGISDLNLSRNYLTGNLPDVFGQRSYFTVLDLSYNNLK 311

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G IPKSVSEASYIGHLDLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 312 GPIPKSVSEASYIGHLDLSHNHLCGPIPTGAPFDHLEAASFVFNDCLCGKPLKAC 366

[Close]

BLAST of Sed0000844.1 vs. ExPASy TrEMBL
Match: A0A5D3BB87 (DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001260 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.7e-183
Identity = 315/355 (88.73%), Postives = 335/355 (94.37%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++AL E YLGIFNSWTGDDCCNRW+G+SCD  THRV
Sbjct: 37  LLILAVSSAVHACPPSERAALLAFRAALHEPYLGIFNSWTGDDCCNRWHGISCDQVTHRV 96

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGE+EDPIFERAHRTGYMTGYISP ICKLTRLSSVIIADWKGITGEIPRCITSLP
Sbjct: 97  ADINLRGEAEDPIFERAHRTGYMTGYISPEICKLTRLSSVIIADWKGITGEIPRCITSLP 156

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IP+S+T+LTNLMHLDLRNNK 
Sbjct: 157 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPSSLTALTNLMHLDLRNNKF 216

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LPRNFGN+RMLSRALLSRNQ SG LP SI+KIYRLADLDLS NQLSG IP WIGR+A
Sbjct: 217 SGRLPRNFGNLRMLSRALLSRNQFSGSLPDSISKIYRLADLDLSQNQLSGVIPSWIGRMA 276

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSGSIP S+LVSGISDLN+SRNYLTG++PD FG RSYFTVLDLSYNNL 
Sbjct: 277 VLATLNLDGNKFSGSIPPSILVSGISDLNLSRNYLTGNLPDVFGQRSYFTVLDLSYNNLK 336

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G IPKSVSEASYIGHLDLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 337 GPIPKSVSEASYIGHLDLSHNHLCGPIPTGAPFDHLEAASFVFNDCLCGKPLKAC 391

[Close]

BLAST of Sed0000844.1 vs. ExPASy TrEMBL
Match: A0A1S3BMR1 (DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC103491529 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.7e-183
Identity = 315/355 (88.73%), Postives = 335/355 (94.37%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           LL+LAV SAVHACPPSERAAL+AF++AL E YLGIFNSWTGDDCCNRW+G+SCD  THRV
Sbjct: 37  LLILAVSSAVHACPPSERAALLAFRAALHEPYLGIFNSWTGDDCCNRWHGISCDQVTHRV 96

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           ADINLRGE+EDPIFERAHRTGYMTGYISP ICKLTRLSSVIIADWKGITGEIPRCITSLP
Sbjct: 97  ADINLRGEAEDPIFERAHRTGYMTGYISPEICKLTRLSSVIIADWKGITGEIPRCITSLP 156

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLRILDLIGNR+SGDLPADIGRLRRLTVLNVADNLISG+IP+S+T+LTNLMHLDLRNNK 
Sbjct: 157 FLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGSIPSSLTALTNLMHLDLRNNKF 216

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG LPRNFGN+RMLSRALLSRNQ SG LP SI+KIYRLADLDLS NQLSG IP WIGR+A
Sbjct: 217 SGRLPRNFGNLRMLSRALLSRNQFSGSLPDSISKIYRLADLDLSQNQLSGVIPSWIGRMA 276

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGNKFSGSIP S+LVSGISDLN+SRNYLTG++PD FG RSYFTVLDLSYNNL 
Sbjct: 277 VLATLNLDGNKFSGSIPPSILVSGISDLNLSRNYLTGNLPDVFGQRSYFTVLDLSYNNLK 336

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G IPKSVSEASYIGHLDLSHNHLCGPIP GAPFDHLEAASFV+NDCLCGKPLKAC
Sbjct: 337 GPIPKSVSEASYIGHLDLSHNHLCGPIPTGAPFDHLEAASFVFNDCLCGKPLKAC 391

[Close]

BLAST of Sed0000844.1 vs. TAIR 10
Match: AT3G20820.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 546.6 bits (1407), Expect = 1.5e-155
Identity = 259/362 (71.55%), Postives = 307/362 (84.81%), Query Frame = 0


Query: 1   MEMRFPALLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSC 60
           M +    LLLL + S+   CPPS+R AL+AF+SAL E YLGIFNSWTG DCC+ WYG+SC
Sbjct: 1   MNLNVVVLLLLLLISSATCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISC 60

Query: 61  DSGTHRVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIP 120
           DS THRVADINLRGESEDPIFERAHRTGYMTG+IS +IC+LTRLS++ IADWKGI+GEIP
Sbjct: 61  DSLTHRVADINLRGESEDPIFERAHRTGYMTGHISASICELTRLSAITIADWKGISGEIP 120

Query: 121 RCITSLPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHL 180
           +CIT LPFLR LDLIGN+ISG +P DIGRL RL VLNVADN ISG+IP S+T+L++LMHL
Sbjct: 121 KCITRLPFLRTLDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHL 180

Query: 181 DLRNNKISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIP 240
           DLRNN ISG +P + G ++MLSRALLS N+++G +P S+  IYRLAD+DLS NQL GTIP
Sbjct: 181 DLRNNLISGVIPSDVGRLKMLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYGTIP 240

Query: 241 DWIGRLAVLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLD 300
             +GR++VLATLNLDGNK SG IP +L+ S + +LN+SRN L G IP+ FGPRSYFTVLD
Sbjct: 241 PSLGRMSVLATLNLDGNKISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLD 300

Query: 301 LSYNNLNGSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLK 360
           LSYNNL G IP+S+S AS+IGHLDLSHNHLCG IP G+PFDHLEAASF++NDCLCGKPL+
Sbjct: 301 LSYNNLKGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDCLCGKPLR 360

Query: 361 AC 363
           AC
Sbjct: 361 AC 362

[Close]

BLAST of Sed0000844.1 vs. TAIR 10
Match: AT5G12940.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 480.7 bits (1236), Expect = 1.0e-135
Identity = 227/355 (63.94%), Postives = 283/355 (79.72%), Query Frame = 0


Query: 8   LLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWTGDDCCNRWYGVSCDSGTHRV 67
           ++ L + + VH+C PS+RAAL+ F++ L E Y+G+FN+W G DCC  WYGVSCD  T RV
Sbjct: 15  VVFLLLSTTVHSCLPSDRAALLEFRAKLNEPYIGVFNTWKGLDCCKGWYGVSCDPNTRRV 74

Query: 68  ADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLP 127
           A I LRGESEDP+F++A R+G MTG ISP+ICKLTRLS +IIADWKGI+G IP CI +LP
Sbjct: 75  AGITLRGESEDPLFQKAKRSGLMTGSISPSICKLTRLSGIIIADWKGISGVIPSCIENLP 134

Query: 128 FLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNNKI 187
           FLR LDL+GN+ SG +PA+IG+L RL VLN+ADN + G IP SIT L +L HLDLRNN I
Sbjct: 135 FLRHLDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRLVSLSHLDLRNNNI 194

Query: 188 SGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGRLA 247
           SG +PR+ G ++M+SR LLS N++SG +P S+ +IYRLADL+LS+N+L+G IP   G+++
Sbjct: 195 SGVIPRDIGRLKMVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNRLTGPIPASFGKMS 254

Query: 248 VLATLNLDGNKFSGSIPASLLVSGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN 307
           VLATLNLDGN  SG IP SLL S IS+LN+S N +TGSIP+ FGPRSYFTVLDL+ N L 
Sbjct: 255 VLATLNLDGNLISGMIPGSLLASSISNLNLSGNLITGSIPNTFGPRSYFTVLDLANNRLQ 314

Query: 308 GSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPLKAC 363
           G IP S++ AS+IGHLD+SHNHLCG IP G+PFDHL+A SF YN CLCGKPL  C
Sbjct: 315 GPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNACLCGKPLGNC 369

[Close]

BLAST of Sed0000844.1 vs. TAIR 10
Match: AT3G12610.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-120
Identity = 207/355 (58.31%), Postives = 269/355 (75.77%), Query Frame = 0


Query: 7   ALLLLAVFSAVHACPPSERAALIAFKSALQERYLGIFNSWT-GDDCCNRWYGVSCDSGTH 66
           A++ ++V S V  C P ++ AL AFKS+L E  LGIFN+W+   DCC  WYG+SCD  + 
Sbjct: 14  AVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDSG 73

Query: 67  RVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITS 126
           RV DI+LRGESED IF++A R+GYM+G I PA+C LT L+S+++ADWKGITGEIP CITS
Sbjct: 74  RVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCITS 133

Query: 127 LPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLDLRNN 186
           L  LRILDL GN+I+G++PA+IG+L +L VLN+A+N +SG IPAS+TSL  L HL+L  N
Sbjct: 134 LASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTEN 193

Query: 187 KISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQLSGTIPDWIGR 246
            I+G +P +FG+++MLSR LL RN+L+G +P SI+ + RLADLDLS N + G IP+W+G 
Sbjct: 194 GITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGN 253

Query: 247 LAVLATLNLDGNKFSGSIPASLLV-SGISDLNVSRNYLTGSIPDAFGPRSYFTVLDLSYN 306
           + VL+ LNLD N  +G IP SLL  SG+   N+SRN L G+IPD FG ++Y   LDLS+N
Sbjct: 254 MKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHN 313

Query: 307 NLNGSIPKSVSEASYIGHLDLSHNHLCGPIPGGAPFDHLEAASFVYNDCLCGKPL 360
           +L+G IP S+S A ++GHLD+SHN LCG IP G PFDHLEA SF  N CLCG PL
Sbjct: 314 SLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368

[Close]

BLAST of Sed0000844.1 vs. TAIR 10
Match: AT2G26380.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.4e-52
Identity = 132/352 (37.50%), Postives = 197/352 (55.97%), Query Frame = 0


Query: 5   FPALLLLAVF--SAVHACPPSERAALIAFKSALQERYLGIFNSW-TGDDCCNRWYGVSCD 64
           F A++ L     +A   C P + A L+AFKS + +   GI ++W  G DCC+ W GVSC 
Sbjct: 12  FTAVIFLRCLNPTAAATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCS-WNGVSCP 71

Query: 65  SGTHRVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPR 124
           +G +RV  + +R ES+D          +++G ISP++ KL  L  V+  + K ITG  P 
Sbjct: 72  NG-NRVVVLTIRIESDDAGI-------FLSGTISPSLAKLQHLEGVVFINLKNITGPFPP 131

Query: 125 CITSLPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSLTNLMHLD 184
            +  LP L+ + L   R+SG LPA+IG L RL  L V  N   G+IP+SI++LT L +L+
Sbjct: 132 FLFRLPHLKYVYLENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLN 191

Query: 185 LRNNKISGSLPRNFGNMRMLSR------------------------ALLSRNQLSGYLPA 244
           L  N ++G++P    N++++S                           LSRN+ SG LP 
Sbjct: 192 LGGNLLTGTIPLGIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPP 251

Query: 245 SIAKIYR-LADLDLSLNQLSGTIPDWIGRLAVLATLNLDGNKFSGSIPASLL-VSGISDL 304
           SIA +   LA L+L  N LSG+IP ++ R   L TL+L  N+FSG++P SL  ++ I+++
Sbjct: 252 SIASLAPVLAFLELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANI 311

Query: 305 NVSRNYLTGSIPDAFGPRSYFTVLDLSYNNLN-GSIPKSVSEASYIGHLDLS 327
           N+S N LT   P     ++Y   LDLSYN  +  +IP+ V+ AS +G L L+
Sbjct: 312 NLSHNLLTNPFP-VLNVKNYILTLDLSYNKFHMETIPEWVTSASILGSLKLA 353

[Close]

BLAST of Sed0000844.1 vs. TAIR 10
Match: AT5G23400.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 199.5 bits (506), Expect = 4.6e-51
Identity = 127/345 (36.81%), Postives = 180/345 (52.17%), Query Frame = 0


Query: 20  CPPSERAALIAFKSALQERYLGIFNSWTGDDCCN-RWYGVSCDSGTHRVADINLRGESED 79
           C   +RA L+ FKS++ E   G+ +SW G DCCN  W GV C+  T +V  + L+    +
Sbjct: 31  CSSQDRATLLGFKSSIIEDTTGVLDSWVGKDCCNGDWEGVQCNPATGKVTGLVLQSAVNE 90

Query: 80  PIFERAHRTGYMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITS------------- 139
           P       T YM G +SP++  L  L  ++I   K ITG IP   ++             
Sbjct: 91  P-------TLYMKGTLSPSLGNLRSLELLLITGNKFITGSIPNSFSNLTSLRQLILDDNS 150

Query: 140 -----------LPFLRILDLIGNRISGDLPADIGRLRRLTVLNVADNLISGTIPASITSL 199
                      LP L IL L GNR SG +PA  G LRRLT +N+A N  SG IP +  +L
Sbjct: 151 LQGNVLSSLGHLPLLEILSLAGNRFSGLVPASFGSLRRLTTMNLARNSFSGPIPVTFKNL 210

Query: 200 TNLMHLDLRNNKISGSLPRNFGNMRMLSRALLSRNQLSGYLPASIAKIYRLADLDLSLNQ 259
             L +LDL +N +SG +P   G  + L+   LS N+ SG LP S+  + +L  + L  N 
Sbjct: 211 LKLENLDLSSNLLSGPIPDFIGQFQNLTNLYLSSNRFSGVLPVSVYSLRKLQTMSLERNG 270

Query: 260 LSGTIPDWIGRLAVLATLNLDGNKFSGSIPASLL-VSGISDLNVSRNYLTGSIPDAFGPR 319
           L+G + D    L  L +L L GNKF G IPAS+  +  +  LN+SRN  +  +P   G R
Sbjct: 271 LTGPLSDRFSYLKSLTSLQLSGNKFIGHIPASITGLQNLWSLNLSRNLFSDPLP-VVGAR 330

Query: 320 SYFTVL--DLSYNNLN-GSIPKSVSEASYIGHLDLSHNHLCGPIP 336
            + ++L  DLSYNNLN G+IP  + +   +  ++L+   L G  P
Sbjct: 331 GFPSLLSIDLSYNNLNLGAIPSWIRD-KQLSDINLAGCKLRGTFP 366

The following BLAST results are available for this feature:

BLAST of Sed0000844.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010257.1	7.7e-186	89.01	DNA damage-repair/toleration protein DRT-like protein, partial [Cucurbita argyro...	[more]
XP_023512290.1	1.7e-185	88.73	DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944117.1	3.8e-185	88.45	DNA damage-repair/toleration protein DRT100-like [Cucurbita moschata]	[more]
KAG6570381.1	3.8e-185	88.73	DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_038902030.1	1.9e-184	88.80	DNA damage-repair/toleration protein DRT100-like [Benincasa hispida]	[more]

BLAST of Sed0000844.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00874	2.2e-119	58.31	DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=D...	[more]
F4J8G2	7.1e-41	32.27	Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1	[more]
Q69SP5	1.2e-40	34.04	LRR receptor-like serine/threonine-protein kinase ER1 OS=Oryza sativa subsp. jap...	[more]
Q9FL28	1.6e-40	34.33	LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana O...	[more]
Q9SCT4	1.6e-40	43.36	Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabi...	[more]

BLAST of Sed0000844.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUX0	1.9e-185	88.45	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JFH2	9.2e-185	88.45	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5A7TIA9	1.7e-183	88.73	DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. ma...	[more]
A0A5D3BB87	1.7e-183	88.73	DNA-damage-repair/toleration protein DRT100-like protein OS=Cucumis melo var. ma...	[more]
A0A1S3BMR1	1.7e-183	88.73	DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Sed0000844.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20820.1	1.5e-155	71.55	Leucine-rich repeat (LRR) family protein	[more]
AT5G12940.1	1.0e-135	63.94	Leucine-rich repeat (LRR) family protein	[more]
AT3G12610.1	1.6e-120	58.31	Leucine-rich repeat (LRR) family protein	[more]
AT2G26380.1	1.4e-52	37.50	Leucine-rich repeat (LRR) family protein	[more]
AT5G23400.1	4.6e-51	36.81	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 246..270 e-value: 230.0 score: 2.2 coord: 174..197 e-value: 11.0 score: 13.0 coord: 126..150 e-value: 22.0 score: 10.4
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 22..61 e-value: 1.1E-8 score: 35.2
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 273..330 e-value: 6.3E-7 score: 29.1 coord: 151..211 e-value: 1.7E-8 score: 34.1
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 17..84 e-value: 1.3E-8 score: 35.4 coord: 86..362 e-value: 6.7E-83 score: 280.9
None	No IPR available	PANTHER	PTHR48060	DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100	coord: 7..362
None	No IPR available	PANTHER	PTHR48060:SF3	LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN	coord: 7..362
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 19..360

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Sed0000844	Sed0000844	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000844.1-five_prime_utr	Sed0000844.1-five_prime_utr-LG05:10912583..10912641	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000844.1-exon	Sed0000844.1-exon-LG05:10912583..10914373	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000844.1-cds	Sed0000844.1-cds-LG05:10912642..10913730	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Sed0000844.1-three_prime_utr	Sed0000844.1-three_prime_utr-LG05:10913731..10914373	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Sed0000844.1	Sed0000844.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding