MS015215.1 (mRNA) Bitter gourd (TR) v1

Overview


Name	MS015215.1
Type	mRNA
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function, DUF538
Location	scaffold2: 1849167 .. 1850997 (-)
Sequence length	534
RNA-Seq Expression	MS015215.1
Synteny	MS015215.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGCTCTGACGAAAGTGGGCAGCATTAAGGTCGGGAGCTTGTGGATTTCGAAGAAAGCCAAGGAGGAATTCGCAAACATTACTGACGATATCCATGTGAGTTTCTTGTTCTGTTTCTGCTTTGTATTTCTTAATTTTTCTCCTCCAAGAATCATTGCCTGCTGTTTTTCTTTGATTTGCGGTGTTGGGTTTCTTTCTATTCGTCGCGATTTGAGTAATGTAGCTTAGTTTTAATGCCACTAGCTGCTGGTTTTGTAATGTTTTTCGCTTACTACCAAGACTGGGGCGAGATCCGTTAGGTTCTTCCACTAACGCAGAGGATTGGGCGATAGGGTTACAATGGAAGTGAAAATGAACTGAAGGGGCTTACTGGGGTTTCGTTGATTGTATCAGTTCGATAAAAATGACCTTTGAAGAAAGATTGAGAAAATTCTTATGGAAACCGGTTGACTGACTAAAATCTGTTTGGATCAAACCCCAAGATGAATGCTGGAATGAGAACTTATTTATTAATATTTGCCATCAATCTGTCAAAATCGAGGCTCTCTTTAGTTGCAATCGTTATATCTAGGAGATTTTGATTCAGATTGTCAAATGTCAACGAGCTTAATTGAGAACACAGCAAAAACAGAATTTATCCGAATGCACAATATATGTATTTAAAATATCAACTGCCATCGGCTAAACCGCTGAGCACCTTCTATTGACGTATTGGGAATATTAAACTTAGACCTTGGTTGGTTATAATCTTATACATGTTACCTTTTATTGCAGACCTTTTCAAACACCGTTGAAGAAAAGGCTAAGTGGATTTTCAACAAGCTGAAAGGTGAAGTCTTGCATATTCTCTCCTTTTTATATCAGAATGATTGAACATTTATTCCGGATTTGATGGACAATTTTGCTGCAATTTGGAATTGATTGCGCAGCGCAGGATAAATCCCCACCTCAACCTCCAGCTTCTCCAAACGAGAAGTCCCAATGAATTAGCCCTCATTAGACAGTGCCTTGTTTGGTAGATGAGGTTGCATCTAATCTATCTAAGATGGCGAATGGTGACAATTATCACTACACTAATTTCGCCCATTTTACGATTCAAATTACATAGAATTTGAAGATAGAACACTTAGCTCTGACATAATTAGTCGCAGAGTTCATTTTCCCCTTTTGCCTCATCATTTATCATCATAACTGAGCTTTTTTGTGGAAATTCCTCTTTTACTTTTCCTTTTGGTCGAGTTCCTTTCTGAATCTGCTAGTACTCGGGCTTTGCCTGCGCTGTGTTTCCAGTCTGCTGCATTTCTGTTTTGTTCATGTTCCAAACAAAATCTGCTCCCTCGTTACTGACTCTCATCTTCTGCACTAAGTTTTAAGAGATTTATGTGAGCATAATACTGAAGAAAACCATAGCCCATATAAGTATTGATATTATCGTTTTCCTCCCACAGGTAAGCCATTAAAGAGCTTGCCAGATTTGCTTCGCGAGTACAACTTACCACCTGGCCTCTTTCCTCAGAACACAATCTGCTATGAATTCGACGAATCCAAATCGAAGCTGATTGTACACTTGCCATCCGCTTGCGAGATAAGCTTCACGGATTCCTCCATAGTCAGATACGCGACCCGGGTGAAAGGAACTCTTCATAGAGGGAAGCTTACAAGCATTGAAGGAATGAAGACGAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGGTGGTTGAGGGCTACAAGTCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCGTACGAAAAGCCCCGTGACGCCGTTAGAGTAGAAGAATTC

mRNA sequence

ATGGAGAAGGCTCTGACGAAAGTGGGCAGCATTAAGGTCGGGAGCTTGTGGATTTCGAAGAAAGCCAAGGAGGAATTCGCAAACATTACTGACGATATCCATACCTTTTCAAACACCGTTGAAGAAAAGGCTAAGTGGATTTTCAACAAGCTGAAAGGTGAACCATTAAAGAGCTTGCCAGATTTGCTTCGCGAGTACAACTTACCACCTGGCCTCTTTCCTCAGAACACAATCTGCTATGAATTCGACGAATCCAAATCGAAGCTGATTGTACACTTGCCATCCGCTTGCGAGATAAGCTTCACGGATTCCTCCATAGTCAGATACGCGACCCGGGTGAAAGGAACTCTTCATAGAGGGAAGCTTACAAGCATTGAAGGAATGAAGACGAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGGTGGTTGAGGGCTACAAGTCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCGTACGAAAAGCCCCGTGACGCCGTTAGAGTAGAAGAATTC

Coding sequence (CDS)

ATGGAGAAGGCTCTGACGAAAGTGGGCAGCATTAAGGTCGGGAGCTTGTGGATTTCGAAGAAAGCCAAGGAGGAATTCGCAAACATTACTGACGATATCCATACCTTTTCAAACACCGTTGAAGAAAAGGCTAAGTGGATTTTCAACAAGCTGAAAGGTGAACCATTAAAGAGCTTGCCAGATTTGCTTCGCGAGTACAACTTACCACCTGGCCTCTTTCCTCAGAACACAATCTGCTATGAATTCGACGAATCCAAATCGAAGCTGATTGTACACTTGCCATCCGCTTGCGAGATAAGCTTCACGGATTCCTCCATAGTCAGATACGCGACCCGGGTGAAAGGAACTCTTCATAGAGGGAAGCTTACAAGCATTGAAGGAATGAAGACGAAGGTCCTAGTGTGGGTGAAAGTGACAAGCGTGGTGGTTGAGGGCTACAAGTCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCGTACGAAAAGCCCCGTGACGCCGTTAGAGTAGAAGAATTC

Protein sequence

MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLPDLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRGKLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF

Homology

[Close]

BLAST of MS015215.1 vs. NCBI nr
Match: XP_022151271.1 (uncharacterized protein At5g01610 [Momordica charantia])

HSP 1 Score: 354.8 bits (909), Expect = 4.5e-94
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG
Sbjct: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF
Sbjct: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 178

[Close]

BLAST of MS015215.1 vs. NCBI nr
Match: XP_004135158.1 (uncharacterized protein At5g01610 [Cucumis sativus] >KGN51959.1 hypothetical protein Csa_008250 [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 7.6e-86
Identity = 162/178 (91.01%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGS+KVGSLWISKKAKEE ANITDD++TFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDLNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPSACEISF DSS+VRYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT+IEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAYEKP DA+RV EF
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]

BLAST of MS015215.1 vs. NCBI nr
Match: XP_008446410.1 (PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo] >KAA0034454.1 uncharacterized protein E6C27_scaffold65G004620 [Cucumis melo var. makuwa] >TYK17680.1 uncharacterized protein E5676_scaffold1932G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGS+KVGSLWISKKAKEE ANITDD +TFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDFNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPSACEISF DSS+VRYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT+IEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAYEKP DA+RV EF
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]

BLAST of MS015215.1 vs. NCBI nr
Match: XP_038891837.1 (uncharacterized protein At5g01610 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGS+KVGSLWISKKAKEE ANITDD +TFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDFNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           +LLREYNLPPGLFPQN  CYEFDESKSKLIV+LPSACEISF DSS+VRYATRVK TL RG
Sbjct: 61  ELLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKATLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLTSIEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAYEKP DAVRVE+F
Sbjct: 121 KLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAVRVEDF 178

[Close]

BLAST of MS015215.1 vs. NCBI nr
Match: XP_023543022.1 (uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 159/178 (89.33%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKV S+KVGSLW+SKKAKEEF+NITDD HTFS+TVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVSSLKVGSLWVSKKAKEEFSNITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPS CEISF DSS++RYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT IEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAY+KPRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFTAGVKKSRSKDAYDKPRDAVRVEAF 178

[Close]

BLAST of MS015215.1 vs. ExPASy Swiss-Prot
Match: Q9M015 (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-44
Identity = 83/167 (49.70%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 12  KVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLPDLLREYNLPPG 71
           KVGS W+ +KA ++F ++ +D+++ S ++E   KW+ NK+KG+  K LP+LL+EY+LP G
Sbjct: 7   KVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIG 66

Query: 72  LFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRGKLTSIEGMKTK 131
           +FP +   YEFDE   KL V +PS CE+ + DSS++++ T V G L +GKLT +EG+KTK
Sbjct: 67  IFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126

Query: 132 VLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           V++WVKVTS+  +   + KV+FTAG+KKSRS+DAYE  R+ +RV++F
Sbjct: 127 VMIWVKVTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170

[Close]

BLAST of MS015215.1 vs. ExPASy TrEMBL
Match: A0A6J1DE46 (uncharacterized protein At5g01610 OS=Momordica charantia OX=3673 GN=LOC111019230 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.2e-94
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG
Sbjct: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF
Sbjct: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 178

[Close]

BLAST of MS015215.1 vs. ExPASy TrEMBL
Match: A0A0A0KSU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606500 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86
Identity = 162/178 (91.01%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGS+KVGSLWISKKAKEE ANITDD++TFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDLNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPSACEISF DSS+VRYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT+IEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAYEKP DA+RV EF
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]

BLAST of MS015215.1 vs. ExPASy TrEMBL
Match: A0A5A7STB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00050 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGS+KVGSLWISKKAKEE ANITDD +TFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDFNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPSACEISF DSS+VRYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT+IEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAYEKP DA+RV EF
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]

BLAST of MS015215.1 vs. ExPASy TrEMBL
Match: A0A1S3BF00 (uncharacterized protein At5g01610-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489164 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKVGS+KVGSLWISKKAKEE ANITDD +TFSNTVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVGSLKVGSLWISKKAKEELANITDDFNTFSNTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPSACEISF DSS+VRYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNMTCYEFDESKSKLIVYLPSACEISFKDSSVVRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT+IEGMKTKVLVWVKVTSV VEGYKSDKVWFTAGVKKSRSKDAYEKP DA+RV EF
Sbjct: 121 KLTNIEGMKTKVLVWVKVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAIRVGEF 178

[Close]

BLAST of MS015215.1 vs. ExPASy TrEMBL
Match: A0A6J1HWP1 (uncharacterized protein At5g01610 OS=Cucurbita maxima OX=3661 GN=LOC111467342 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85
Identity = 159/178 (89.33%), Postives = 167/178 (93.82%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKV S+KVGSLW+SKKAKEEFANITDD HTFS+TVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVSSLKVGSLWVSKKAKEEFANITDDFHTFSSTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLLREYNLPPGLFPQN  CYEFDESKSKLIV+LPS CEISF DSS++RYATRVKGTL RG
Sbjct: 61  DLLREYNLPPGLFPQNITCYEFDESKSKLIVYLPSVCEISFKDSSVIRYATRVKGTLQRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           KLT IEGMKTKVLVWVKVTSV VEGYKSDKVWF AGVKKSRSKDAY+KPRDAVRVE F
Sbjct: 121 KLTGIEGMKTKVLVWVKVTSVTVEGYKSDKVWFIAGVKKSRSKDAYDKPRDAVRVEAF 178

[Close]

BLAST of MS015215.1 vs. TAIR 10
Match: AT2G03350.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 274.6 bits (701), Expect = 5.5e-74
Identity = 133/175 (76.00%), Postives = 151/175 (86.29%), Query Frame = 0


Query: 1   MEKALTKVGSIKVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLP 60
           MEKALTKV S KVGS WISKKAKEE +NIT+D+ TFS+TVEEKAKWIFNKLKG+PLKSLP
Sbjct: 1   MEKALTKVTSFKVGSSWISKKAKEELSNITNDLTTFSSTVEEKAKWIFNKLKGKPLKSLP 60

Query: 61  DLLREYNLPPGLFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRG 120
           DLL+EYNLPPGLFPQN ICYEFDE+K+KL V   S CE++F D S +RYATRVKG L RG
Sbjct: 61  DLLKEYNLPPGLFPQNIICYEFDETKNKLTVFFSSPCEVTFKDGSAIRYATRVKGILLRG 120

Query: 121 KLTSIEGMKTKVLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRV 176
           KL  +EGMKTKVLVWVKVT++ VE  KSDK+WFTAGVKKSRSKD Y+ P DA++V
Sbjct: 121 KLMGVEGMKTKVLVWVKVTTISVESSKSDKLWFTAGVKKSRSKDVYDTPHDAIKV 175

[Close]

BLAST of MS015215.1 vs. TAIR 10
Match: AT5G37070.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 181.8 bits (460), Expect = 4.8e-46
Identity = 85/167 (50.90%), Postives = 121/167 (72.46%), Query Frame = 0


Query: 12  KVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLPDLLREYNLPPG 71
           KVGS W+ +KA +EF ++ DD ++ S+++E   KW+ NKLKG+  K LP+LL+E+ LP G
Sbjct: 7   KVGSYWLGQKANKEFNSVGDDFNSLSSSIEGGTKWLVNKLKGKMQKPLPELLKEFGLPVG 66

Query: 72  LFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRGKLTSIEGMKTK 131
           +FPQ+   YEF+E   KL V +P  CE+ + DSS++R++T V G L +GKL  +EGMKTK
Sbjct: 67  IFPQDATNYEFNEETGKLTVFIPETCEVGYRDSSVLRFSTTVTGYLEKGKLAEVEGMKTK 126

Query: 132 VLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           V++WVKVT +  +   S KV+FTAG+KKSRS+DAYE  R  V V++F
Sbjct: 127 VMIWVKVTCISAD---SSKVYFTAGIKKSRSRDAYEVIRPGVGVDKF 170

[Close]

BLAST of MS015215.1 vs. TAIR 10
Match: AT3G08890.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 181.0 bits (458), Expect = 8.2e-46
Identity = 84/167 (50.30%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 12  KVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLPDLLREYNLPPG 71
           KVGS W+ KKA ++  ++ DDI++ S+++E   KW+ NK+KG+  K LP+LL+E+ LP G
Sbjct: 7   KVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKEFGLPVG 66

Query: 72  LFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRGKLTSIEGMKTK 131
           +FP++   YEF+E   KL V +PS CE+ + D+S++R+ T V G L +GKL  +EGMKTK
Sbjct: 67  IFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADVEGMKTK 126

Query: 132 VLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           V++WVKVTS+  +   S KV FTAG+KKSRS+DAYE  RD V +++F
Sbjct: 127 VMIWVKVTSISAD---SSKVHFTAGMKKSRSRDAYEVLRDGVEIDKF 170

[Close]

BLAST of MS015215.1 vs. TAIR 10
Match: AT3G08890.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 181.0 bits (458), Expect = 8.2e-46
Identity = 84/167 (50.30%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 12  KVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLPDLLREYNLPPG 71
           KVGS W+ KKA ++  ++ DDI++ S+++E   KW+ NK+KG+  K LP+LL+E+ LP G
Sbjct: 7   KVGSYWLGKKANKQLDSVGDDINSLSSSIEGGTKWLVNKIKGKMQKPLPELLKEFGLPVG 66

Query: 72  LFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRGKLTSIEGMKTK 131
           +FP++   YEF+E   KL V +PS CE+ + D+S++R+ T V G L +GKL  +EGMKTK
Sbjct: 67  IFPRDATNYEFNEQTRKLTVFIPSICEVGYKDTSVLRFTTTVTGFLEKGKLADVEGMKTK 126

Query: 132 VLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           V++WVKVTS+  +   S KV FTAG+KKSRS+DAYE  RD V +++F
Sbjct: 127 VMIWVKVTSISAD---SSKVHFTAGMKKSRSRDAYEVLRDGVEIDKF 170

[Close]

BLAST of MS015215.1 vs. TAIR 10
Match: AT5G01610.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 181.0 bits (458), Expect = 8.2e-46
Identity = 83/167 (49.70%), Postives = 125/167 (74.85%), Query Frame = 0


Query: 12  KVGSLWISKKAKEEFANITDDIHTFSNTVEEKAKWIFNKLKGEPLKSLPDLLREYNLPPG 71
           KVGS W+ +KA ++F ++ +D+++ S ++E   KW+ NK+KG+  K LP+LL+EY+LP G
Sbjct: 7   KVGSYWLGQKANKQFDSVGNDLNSVSTSIEGGTKWLVNKIKGKMQKPLPELLKEYDLPIG 66

Query: 72  LFPQNTICYEFDESKSKLIVHLPSACEISFTDSSIVRYATRVKGTLHRGKLTSIEGMKTK 131
           +FP +   YEFDE   KL V +PS CE+ + DSS++++ T V G L +GKLT +EG+KTK
Sbjct: 67  IFPGDATNYEFDEETKKLTVLIPSICEVGYKDSSVLKFTTTVTGHLEKGKLTDVEGIKTK 126

Query: 132 VLVWVKVTSVVVEGYKSDKVWFTAGVKKSRSKDAYEKPRDAVRVEEF 179
           V++WVKVTS+  +   + KV+FTAG+KKSRS+DAYE  R+ +RV++F
Sbjct: 127 VMIWVKVTSISTD---ASKVYFTAGMKKSRSRDAYEVQRNGLRVDKF 170

The following BLAST results are available for this feature:

BLAST of MS015215.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151271.1	4.5e-94	99.44	uncharacterized protein At5g01610 [Momordica charantia]	[more]
XP_004135158.1	7.6e-86	91.01	uncharacterized protein At5g01610 [Cucumis sativus] >KGN51959.1 hypothetical pro...	[more]
XP_008446410.1	1.3e-85	91.01	PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo] >KAA...	[more]
XP_038891837.1	2.2e-85	91.01	uncharacterized protein At5g01610 [Benincasa hispida]	[more]
XP_023543022.1	2.2e-85	89.33	uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS015215.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M015	1.2e-44	49.70	Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 P...	[more]

BLAST of MS015215.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DE46	2.2e-94	99.44	uncharacterized protein At5g01610 OS=Momordica charantia OX=3673 GN=LOC111019230...	[more]
A0A0A0KSU5	3.7e-86	91.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606500 PE=4 SV=1	[more]
A0A5A7STB8	6.3e-86	91.01	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BF00	6.3e-86	91.01	uncharacterized protein At5g01610-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1HWP1	2.4e-85	89.33	uncharacterized protein At5g01610 OS=Cucurbita maxima OX=3661 GN=LOC111467342 PE...	[more]

BLAST of MS015215.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03350.1	5.5e-74	76.00	Protein of unknown function, DUF538	[more]
AT5G37070.1	4.8e-46	50.90	Protein of unknown function, DUF538	[more]
AT3G08890.1	8.2e-46	50.30	Protein of unknown function, DUF538	[more]
AT3G08890.2	8.2e-46	50.30	Protein of unknown function, DUF538	[more]
AT5G01610.1	8.2e-46	49.70	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 61..167 e-value: 6.8E-28 score: 97.4
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 3..178
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 37..178 e-value: 1.5E-45 score: 156.3
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 12..177
None	No IPR available	PANTHER	PTHR31676:SF142	SUBFAMILY NOT NAMED	coord: 3..178

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MS015215	MS015215	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MS015215.1-cds	MS015215.1-cds-scaffold2:1849167..1849538	CDS
MS015215.1-cds	MS015215.1-cds-scaffold2:1850158..1850217	CDS
MS015215.1-cds	MS015215.1-cds-scaffold2:1850896..1850997	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MS015215.1	MS015215.1-protein	polypeptide