MELO3C033221.jh1.t1 (mRNA) Melon (Harukei-3) v1.41

Overview
NameMELO3C033221.jh1.t1
TypemRNA
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 10575572 .. 10577054 (-)
Sequence length411
RNA-Seq ExpressionMELO3C033221.jh1.t1
SyntenyMELO3C033221.jh1.t1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAATATGTTGAAGATATTCACCCTTATTGATACAAATCAAGAAATCAAATTTGAATCAAATGAAGAAGTTGAAGAGATGCAATGCCTAAAAATTGAAGAGTTATTTGGACAACCAAAAAGTCATAAAATTAAATAATTATTAAGGAATTATGCATTTATTTAATGTTTTTTTTATTTATTATATAGCAGTTGAAATGACTTAAAATTAAATATTTTGACCTTTAATTTAATATTTTAATAAAGATAAATAAGTTGTAATTTCTACATTTTAAAAGAAGATTAGGGACGAATGAAATCTGAAAAATTCTAAAATGTAGAATTTTTTCTTCTGTGTGTTGTTATGATAAAATACACGAATATTTAGAGCATTCAAGTGAGAAATAAACTGTCTTACTTGTGGAGTGCTTCGAAGATCGAGGGTTGACGGGGTTTCTAACTTTGTTCAATCCTTTGTTTCTTAGATCACCTAAGTAACTTGAATCTAGCCTATCTTAGGTGTTGAAATCAAATCGATTTTGGGACTCGTGTTTTTTGAGTCTTGTTGTTTAACATGGTTCTTAGATCCAATGCCTAGGGATTTCTTATCATTTGGTATCAGAGCTTTTGGCTCTACATCGGGTATATTTTCCATTTCCAATTTCTTGTGTTTTAGGATTTGCATGCTAGGATCATTCAAGTGGTATTGATCAGGCCTCTTATCGAGTGGTTCGAATCACCAGTTTATAAACGAGTTTTCTTTACTCTTGATCTGGATCATGATCATCAAGGTAATCATTTCAAAACACTTTCCTTCGGTTGATTTCTTGTTGTTTGAGGCTTATTGAGTAATTAGATCTAAAGGTCTTATGGACCAACAAGGTTGTTATATTCAATTTCTCAAGGGATTTTTCAACATTTATTATCCATGTAATCCAACTCATGCCTTGCTAAATTACCTATAAATAGTGGCATTTAGGAGAGTTTGTAGGACACACATATGAAAAAAATTCAAATAAGTGGGAGAATGTTTTTTTAGATTTTCTATTTTCTTAATTTCTTTTTTTTTTATTTCTTTTATTTTATTTATATGTTATATTTTATTTATTTTAAAATTCACTAGAAGAAATATGACCTTTGGTGTCGGTTGAAAAAAATGAAAAGAATGTTTAATGTCGGTTTTTAAAATGCGGATGTTTAATGTCGGTTTAAAACCGACATCAAAGAGAAAGGATTAATGTCAGTTTAAAACCGACATTAAAGCTACTTTTTATTATTATTATTTTTATTTAATTAATATTTCCCTTTTACACTAGGGTTTTAATGCTTTTTCCTTTAACCCATTAGCAGCCGCCTTCATCCCTTCCCTCTATCCCTCTCGTCTCCCCTTCTTGCATCTAATCCTCGTCCATCTTTCATCTCCTCTTCTTCCCTTTCTTCAATCTCCACCGTCGCAAAGTTCCAACTCCCTTATCTCCGCCTTTGATACCTCTCTCACATAA

mRNA sequence

ATGTCGAATATGTTGAAGATATTCACCCTTATTGATACAAATCAAGAAATCAAATTTGAATCAAATGAAGAAGTTGAAGAGATGCAATGCCTAAAAATTGAAGAGTTATTTGGACAACCAAAAAAGCTTTTGGCTCTACATCGGGATTTGCATGCTAGGATCATTCAAGTGGTATTGATCAGGCCTCTTATCGAGTGGTTCGAATCACCAGTTTATAAACGAGTTTTCTTTACTCTTGATCTGGATCATGATCATCAAGCCGCCTTCATCCCTTCCCTCTATCCCTCTCGTCTCCCCTTCTTGCATCTAATCCTCGTCCATCTTTCATCTCCTCTTCTTCCCTTTCTTCAATCTCCACCGTCGCAAAGTTCCAACTCCCTTATCTCCGCCTTTGATACCTCTCTCACATAA

Coding sequence (CDS)

ATGTCGAATATGTTGAAGATATTCACCCTTATTGATACAAATCAAGAAATCAAATTTGAATCAAATGAAGAAGTTGAAGAGATGCAATGCCTAAAAATTGAAGAGTTATTTGGACAACCAAAAAAGCTTTTGGCTCTACATCGGGATTTGCATGCTAGGATCATTCAAGTGGTATTGATCAGGCCTCTTATCGAGTGGTTCGAATCACCAGTTTATAAACGAGTTTTCTTTACTCTTGATCTGGATCATGATCATCAAGCCGCCTTCATCCCTTCCCTCTATCCCTCTCGTCTCCCCTTCTTGCATCTAATCCTCGTCCATCTTTCATCTCCTCTTCTTCCCTTTCTTCAATCTCCACCGTCGCAAAGTTCCAACTCCCTTATCTCCGCCTTTGATACCTCTCTCACATAA

Protein sequence

MSNMLKIFTLIDTNQEIKFESNEEVEEMQCLKIEELFGQPKKLLALHRDLHARIIQVVLIRPLIEWFESPVYKRVFFTLDLDHDHQAAFIPSLYPSRLPFLHLILVHLSSPLLPFLQSPPSQSSNSLISAFDTSLT
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C033221.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C033221.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C033221.jh1.t1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO3C033221.jh1.t1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C033221.jh1MELO3C033221.jh1gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033221.jh1.t1.exonMELO3C033221.jh1.t1.exonexon
MELO3C033221.jh1.t1.exonMELO3C033221.jh1.t1.exon_2exon
MELO3C033221.jh1.t1.exonMELO3C033221.jh1.t1.exon_3exon
MELO3C033221.jh1.t1.exonMELO3C033221.jh1.t1.exon_4exon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033221.jh1.t1.stop_codonMELO3C033221.jh1.t1.stop_codonstop_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033221.jh1.t1.cdsMELO3C033221.jh1.t1.cdsCDS
MELO3C033221.jh1.t1.cdsMELO3C033221.jh1.t1.cds_2CDS
MELO3C033221.jh1.t1.cdsMELO3C033221.jh1.t1.cds_3CDS
MELO3C033221.jh1.t1.cdsMELO3C033221.jh1.t1.cds_4CDS


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C033221.jh1.t1.start_codonMELO3C033221.jh1.t1.start_codonstart_codon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C033221.jh1.t1MELO3C033221.jh1.t1-proteinpolypeptide