HG10017624.1 (mRNA) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGAGGGGTCGGTTTGGAGCACCATAAGAGAGGGAGAAGAAGGTGAAGAAAGAGTGAGGAAAGAAGAAGAAATGTGAGTTTTTTATTTTTATTTTTGTTAATTCTTAAAAAAAAACGTGAGTGGTGTGTACTCCCATCTTTTCTCTTCTCTTCTCTTCTTTTTTTTTTTTAACTAAATAAAAATATATTGTGTGGATTTAGAAGATGTGGTGTCATTTACTTTTCCTTTTCCTTTATTTATTTTTCCTTTTATTCTAATACTTTTTCTTATTTAAAAAAAAGTAGTTCACCTCTTTAGTTTTACATTTTCCTTTAATTCCATTCATTTTCCAATTGTTCCTCCAACAACACTTTCCAAAACAACATCCAAATGACCATTTTCCCCCCAAATGTTGGTAGATCTTGAGTGGGTCTTACAGTATAGAAGCTAAATGTTTATTCTAAATACGAAGTCATTCTAATGATTAGGGATAAACTTAGTAGTAGACATTTAACGATGTTCGAATCTAGTCCTTTTTATCTATTCCTAAATCTAAAAATAAGTAAATTCCCTAACCAATTGTTATCCCACATCATCCGACGATAGTGTAGTATAATAAGGGAAGATGAACTAACGTTCAATTTTGAGGGGAAGATTGTGAAGTTTGGTATAAGTGACTTTGAGAAGATTACAGGACTAAACTATGGAGAACTTCCTACATTAGATACGCATAAGTTTAGAGAAAAGTTCCTTAAGAAATACTTTAAGGAGGATCAACTAATTATGAGAACTGAACTGAGTAAAATGTTTTTAACTAGAGAGTCAATTAAAAAGGATAAAGTGAAACTTGTCAAACTGTTGTTTCTGACAAACTTCCTACTGACAAAACAAGTAACAACTAGAGTCAAAATTAATCATATTAAGATGTTGGATGACGAGGTGCAATTTGATCAATATCCCTAG ATGGGGGAGGGGTCGGTTTGGAGCACCATAAGAGAGGGAGAAGAAGGTGAAGAAAGAGTGAGGAAAGAAGAAGAAATTATAATAAGGGAAGATGAACTAACGTTCAATTTTGAGGGGAAGATTGTGAAGTTTGGTATAAGTGACTTTGAGAAGATTACAGGACTAAACTATGGAGAACTTCCTACATTAGATACGCATAAGTTTAGAGAAAAGTTCCTTAAGAAATACTTTAAGGAGGATCAACTAATTATGAGAACTGAACTGAGTAAAATGTTTTTAACTAGAGAGTCAATTAAAAAGGATAAAGTGAAACTTGTCAAACTGTTGTTTCTGACAAACTTCCTACTGACAAAACAAGTAACAACTAGAGTCAAAATTAATCATATTAAGATGTTGGATGACGAGGTGCAATTTGATCAATATCCCTAG ATGGGGGAGGGGTCGGTTTGGAGCACCATAAGAGAGGGAGAAGAAGGTGAAGAAAGAGTGAGGAAAGAAGAAGAAATTATAATAAGGGAAGATGAACTAACGTTCAATTTTGAGGGGAAGATTGTGAAGTTTGGTATAAGTGACTTTGAGAAGATTACAGGACTAAACTATGGAGAACTTCCTACATTAGATACGCATAAGTTTAGAGAAAAGTTCCTTAAGAAATACTTTAAGGAGGATCAACTAATTATGAGAACTGAACTGAGTAAAATGTTTTTAACTAGAGAGTCAATTAAAAAGGATAAAGTGAAACTTGTCAAACTGTTGTTTCTGACAAACTTCCTACTGACAAAACAAGTAACAACTAGAGTCAAAATTAATCATATTAAGATGTTGGATGACGAGGTGCAATTTGATCAATATCCCTAG MGEGSVWSTIREGEEGEERVRKEEEIIIREDELTFNFEGKIVKFGISDFEKITGLNYGELPTLDTHKFREKFLKKYFKEDQLIMRTELSKMFLTRESIKKDKVKLVKLLFLTNFLLTKQVTTRVKINHIKMLDDEVQFDQYP Homology
BLAST of HG10017624.1 vs. NCBI nr
Match: KAA0060374.1 (uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa] >TYK22114.1 uncharacterized protein E5676_scaffold318G001110 [Cucumis melo var. makuwa]) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-20 Identity = 68/141 (48.23%), Postives = 85/141 (60.28%), Query Frame = 0
BLAST of HG10017624.1 vs. NCBI nr
Match: KGN58352.2 (hypothetical protein Csa_017489 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 4.5e-20 Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0
BLAST of HG10017624.1 vs. NCBI nr
Match: XP_022132727.1 (uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132728.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132729.1 uncharacterized protein LOC111005524 [Momordica charantia] >XP_022132730.1 uncharacterized protein LOC111005524 [Momordica charantia]) HSP 1 Score: 94.4 bits (233), Expect = 8.7e-16 Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of HG10017624.1 vs. NCBI nr
Match: XP_031743197.1 (uncharacterized protein LOC101221625 isoform X9 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of HG10017624.1 vs. NCBI nr
Match: XP_031743208.1 (uncharacterized protein LOC101221625 isoform X20 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of HG10017624.1 vs. ExPASy TrEMBL
Match: A0A5A7UZA2 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001110 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 7.4e-21 Identity = 68/141 (48.23%), Postives = 85/141 (60.28%), Query Frame = 0
BLAST of HG10017624.1 vs. ExPASy TrEMBL
Match: A0A6J1BX50 (uncharacterized protein LOC111005524 OS=Momordica charantia OX=3673 GN=LOC111005524 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16 Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0
BLAST of HG10017624.1 vs. ExPASy TrEMBL
Match: A0A5D3DG30 (DUF1985 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold584G00070 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0
BLAST of HG10017624.1 vs. ExPASy TrEMBL
Match: A0A0A0KI50 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G489950 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 0
BLAST of HG10017624.1 vs. ExPASy TrEMBL
Match: A0A5D3CNI7 (TF-B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005170 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 3.6e-15 Identity = 52/113 (46.02%), Postives = 73/113 (64.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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