Chy2G027270.1 (mRNA) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTTCTTTCATAACTCCATTCTTCCCCACTTTCAAAACGTCACTAATTTCTCTTCCTTCATTTCCAATCAAGCCCATTTCCCCTATCCGAACCCCTTTCCGGCCTCTCGCTTCCTCTGCGCCGCCGCAATCTCCCGCCAAACCCTTAAAAATCCCTCACCCGACGAATTTCAAGACAATCGAAGCAACCCCAAGTGGGAAATCGAGGTTCCTGATCATTGGAGCCGTCTCGGTGGGCGTTGCCCTGTTTCTTATCGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGTCCTGAAGGCCCTTTGGTTGAGGAATTTTGGGACAATGTTAGAAGATATGCACTTTACGCCCTTACTGTGAGTACTGGTGCTATTTATACTATTCTTCTCCCTATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCATTCTCTCTCAAGTTCTTTCTGCTATGGTTGGTGTCACTGAGTTTTCTTATGATTATACTTATTGACCCATCAAATGAAGTTCAATCTTGTTTTCTTGCCATTGCCTCCATACAAATTACAAGTTTAAGATTTTATCTCATTGTGTCTGCAATGCTATGTTTCTTTCTTTGATCTTAAATCTAATAATTCATGGTTGATTGAATGTAGCCGCCATACACTGAACCATATTTTAGAACCTTGGAAGATTAG ATGGCCATTTCTTTCATAACTCCATTCTTCCCCACTTTCAAAACGTCACTAATTTCTCTTCCTTCATTTCCAATCAAGCCCATTTCCCCTATCCGAACCCCTTTCCGGCCTCTCGCTTCCTCTGCGCCGCCGCAATCTCCCGCCAAACCCTTAAAAATCCCTCACCCGACGAATTTCAAGACAATCGAAGCAACCCCAAGTGGGAAATCGAGGTTCCTGATCATTGGAGCCGTCTCGGTGGGCGTTGCCCTGTTTCTTATCGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGTCCTGAAGGCCCTTTGGTTGAGGAATTTTGGGACAATGTTAGAAGATATGCACTTTACGCCCTTACTGTGAGTACTGGTGCTATTTATACTATTCTTCTCCCTATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCATTCTCTCTCAAGTTCTTTCTGCTATGCCGCCATACACTGAACCATATTTTAGAACCTTGGAAGATTAG ATGGCCATTTCTTTCATAACTCCATTCTTCCCCACTTTCAAAACGTCACTAATTTCTCTTCCTTCATTTCCAATCAAGCCCATTTCCCCTATCCGAACCCCTTTCCGGCCTCTCGCTTCCTCTGCGCCGCCGCAATCTCCCGCCAAACCCTTAAAAATCCCTCACCCGACGAATTTCAAGACAATCGAAGCAACCCCAAGTGGGAAATCGAGGTTCCTGATCATTGGAGCCGTCTCGGTGGGCGTTGCCCTGTTTCTTATCGGTTGCGACGGCGAAAGGGCTTTGGCTTTGGGTCCTGAAGGCCCTTTGGTTGAGGAATTTTGGGACAATGTTAGAAGATATGCACTTTACGCCCTTACTGTGAGTACTGGTGCTATTTATACTATTCTTCTCCCTATTTTGGAACTGCTGAAGAACCCCATTACTGCTGTTCTTGTTTTGGCTATTTTTGGGGGTGCCATTTTCATTCTCTCTCAAGTTCTTTCTGCTATGCCGCCATACACTGAACCATATTTTAGAACCTTGGAAGATTAG MAISFITPFFPTFKTSLISLPSFPIKPISPIRTPFRPLASSAPPQSPAKPLKIPHPTNFKTIEATPSGKSRFLIIGAVSVGVALFLIGCDGERALALGPEGPLVEEFWDNVRRYALYALTVSTGAIYTILLPILELLKNPITAVLVLAIFGGAIFILSQVLSAMPPYTEPYFRTLED* Homology
BLAST of Chy2G027270.1 vs. ExPASy TrEMBL
Match: A0A0A0KHP7 (Uncharacterized protein ycf33 OS=Cucumis sativus OX=3659 GN=Csa_6G511100 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79 Identity = 160/169 (94.67%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of Chy2G027270.1 vs. ExPASy TrEMBL
Match: A0A5D3CNG7 (Uncharacterized protein ycf33 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005870 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76 Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Chy2G027270.1 vs. ExPASy TrEMBL
Match: A0A1S3B114 (Uncharacterized protein ycf33 OS=Cucumis melo OX=3656 GN=LOC103484667 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.5e-76 Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Chy2G027270.1 vs. ExPASy TrEMBL
Match: A0A6J1IVK7 (Uncharacterized protein ycf33 OS=Cucurbita maxima OX=3661 GN=LOC111478796 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 1.2e-60 Identity = 126/157 (80.25%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of Chy2G027270.1 vs. ExPASy TrEMBL
Match: A0A6J1GE79 (Uncharacterized protein ycf33 OS=Cucurbita moschata OX=3662 GN=LOC111453148 PE=3 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 1.6e-60 Identity = 125/157 (79.62%), Postives = 138/157 (87.90%), Query Frame = 0
BLAST of Chy2G027270.1 vs. NCBI nr
Match: XP_004134802.1 (uncharacterized protein LOC101208124 [Cucumis sativus] >KGN49043.1 hypothetical protein Csa_004011 [Cucumis sativus]) HSP 1 Score: 306 bits (783), Expect = 5.11e-104 Identity = 160/169 (94.67%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of Chy2G027270.1 vs. NCBI nr
Match: XP_008440084.1 (PREDICTED: uncharacterized protein LOC103484667 [Cucumis melo] >TYK12990.1 uncharacterized protein E5676_scaffold255G005870 [Cucumis melo var. makuwa]) HSP 1 Score: 295 bits (755), Expect = 9.47e-100 Identity = 154/169 (91.12%), Postives = 160/169 (94.67%), Query Frame = 0
BLAST of Chy2G027270.1 vs. NCBI nr
Match: XP_023543366.1 (uncharacterized protein LOC111803269 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251 bits (642), Expect = 1.83e-82 Identity = 129/162 (79.63%), Postives = 141/162 (87.04%), Query Frame = 0
BLAST of Chy2G027270.1 vs. NCBI nr
Match: XP_022979034.1 (uncharacterized protein LOC111478796 [Cucurbita maxima]) HSP 1 Score: 244 bits (623), Expect = 1.43e-79 Identity = 127/162 (78.40%), Postives = 140/162 (86.42%), Query Frame = 0
BLAST of Chy2G027270.1 vs. NCBI nr
Match: XP_022949889.1 (uncharacterized protein LOC111453148 [Cucurbita moschata] >KAG6603825.1 hypothetical protein SDJN03_04434, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034006.1 hypothetical protein SDJN02_03732, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 244 bits (622), Expect = 2.03e-79 Identity = 126/162 (77.78%), Postives = 139/162 (85.80%), Query Frame = 0
BLAST of Chy2G027270.1 vs. TAIR 10
Match: AT4G16410.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF751 (InterPro:IPR008470); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 125.6 bits (314), Expect = 4.1e-29 Identity = 61/95 (64.21%), Postives = 79/95 (83.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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