Bhi11M000410 (mRNA) Wax gourd (B227) v1

Overview


Name	Bhi11M000410
Type	mRNA
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr11: 12343236 .. 12344093 (-)
Sequence length	858
RNA-Seq Expression	Bhi11M000410
Synteny	Bhi11M000410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTTCTTAAAAAGCATCGATATAAGTTCCAAGAAAAGCGAGAGAAGGGATCGGGAAGGTATAACCATGAAGGAACCAACGAAGGAGATCACTACCAACGACAAGAATGGGTGCGGCGAAAGAAGAAGTCTCGAAGAACTTACCGGCGTGGTGGCGTACAGACAGAGAAACGGCGAGGTACAAACTTAACTGATTTGACTTACTCTAATAAACGAAATGGCAAGCGAAGGACGGAGAATACGTGGGCGGAGGATGGGTTGAGATGGCAAAAAGTCCGACGAACAAAATCATTTTTGATCATGCCAGGAGAAGAAAATGGGAAAGTGAGGACGGAAATAATGTATATGGCCAAAGAGGACGAGCGGCGGTGGTGGGAGAAGAAGACGTGTAAACGGAGAGACCATTCTCGGGAAGAGCAGATGCTGTGCAACAAAGGTCAAGGAGCAAGTGCACGAATGGCGGTCGTCGGAATGCGAGTGGCAGCGAAGAAGCAAGTGAGGTGGGAAGTCTTCACGAAAGATGGGTCGGGATTTGCCGAGGGAGTCGAAAGACCATGGGCAGAGAATAAGGCTCGGGAAAAGGAAAAAAAGGGTGAGATGGAAGAAGAATCTTTTACCCACGTGATTTGGAGGGTGGAACCAACGGTTGAAAAGGTGTGGGTTAATGTGCTGGTGGGAGAAGCCCAATATTTTCTGCAAGCCAGCAAGGGCTTTTGGGCCCATTTCGTTTTATGCAGGAATTTCTTTGGAAGGCGATGGGCCAGCAGTTGGAGAAATAGCATTAATTTTGGTTGGGATTGTGGGCTGGGAATCGGGAAAAAAGCCCAATTCTTGTTTGCTATAGAAGTAATTTAG

mRNA sequence

ATGAAGTTTCTTAAAAAGCATCGATATAAGTTCCAAGAAAAGCGAGAGAAGGGATCGGGAAGGTATAACCATGAAGGAACCAACGAAGGAGATCACTACCAACGACAAGAATGGGTGCGGCGAAAGAAGAAGTCTCGAAGAACTTACCGGCGTGGTGGCGTACAGACAGAGAAACGGCGAGGTACAAACTTAACTGATTTGACTTACTCTAATAAACGAAATGGCAAGCGAAGGACGGAGAATACGTGGGCGGAGGATGGGTTGAGATGGCAAAAAGTCCGACGAACAAAATCATTTTTGATCATGCCAGGAGAAGAAAATGGGAAAGTGAGGACGGAAATAATGTATATGGCCAAAGAGGACGAGCGGCGGTGGTGGGAGAAGAAGACGTGTAAACGGAGAGACCATTCTCGGGAAGAGCAGATGCTGTGCAACAAAGGTCAAGGAGCAAGTGCACGAATGGCGGTCGTCGGAATGCGAGTGGCAGCGAAGAAGCAAGTGAGGTGGGAAGTCTTCACGAAAGATGGGTCGGGATTTGCCGAGGGAGTCGAAAGACCATGGGCAGAGAATAAGGCTCGGGAAAAGGAAAAAAAGGGTGAGATGGAAGAAGAATCTTTTACCCACGTGATTTGGAGGGTGGAACCAACGGTTGAAAAGGTGTGGGTTAATGTGCTGGTGGGAGAAGCCCAATATTTTCTGCAAGCCAGCAAGGGCTTTTGGGCCCATTTCGTTTTATGCAGGAATTTCTTTGGAAGGCGATGGGCCAGCAGTTGGAGAAATAGCATTAATTTTGGTTGGGATTGTGGGCTGGGAATCGGGAAAAAAGCCCAATTCTTGTTTGCTATAGAAGTAATTTAG

Coding sequence (CDS)

ATGAAGTTTCTTAAAAAGCATCGATATAAGTTCCAAGAAAAGCGAGAGAAGGGATCGGGAAGGTATAACCATGAAGGAACCAACGAAGGAGATCACTACCAACGACAAGAATGGGTGCGGCGAAAGAAGAAGTCTCGAAGAACTTACCGGCGTGGTGGCGTACAGACAGAGAAACGGCGAGGTACAAACTTAACTGATTTGACTTACTCTAATAAACGAAATGGCAAGCGAAGGACGGAGAATACGTGGGCGGAGGATGGGTTGAGATGGCAAAAAGTCCGACGAACAAAATCATTTTTGATCATGCCAGGAGAAGAAAATGGGAAAGTGAGGACGGAAATAATGTATATGGCCAAAGAGGACGAGCGGCGGTGGTGGGAGAAGAAGACGTGTAAACGGAGAGACCATTCTCGGGAAGAGCAGATGCTGTGCAACAAAGGTCAAGGAGCAAGTGCACGAATGGCGGTCGTCGGAATGCGAGTGGCAGCGAAGAAGCAAGTGAGGTGGGAAGTCTTCACGAAAGATGGGTCGGGATTTGCCGAGGGAGTCGAAAGACCATGGGCAGAGAATAAGGCTCGGGAAAAGGAAAAAAAGGGTGAGATGGAAGAAGAATCTTTTACCCACGTGATTTGGAGGGTGGAACCAACGGTTGAAAAGGTGTGGGTTAATGTGCTGGTGGGAGAAGCCCAATATTTTCTGCAAGCCAGCAAGGGCTTTTGGGCCCATTTCGTTTTATGCAGGAATTTCTTTGGAAGGCGATGGGCCAGCAGTTGGAGAAATAGCATTAATTTTGGTTGGGATTGTGGGCTGGGAATCGGGAAAAAAGCCCAATTCTTGTTTGCTATAGAAGTAATTTAG

Protein sequence

MKFLKKHRYKFQEKREKGSGRYNHEGTNEGDHYQRQEWVRRKKKSRRTYRRGGVQTEKRRGTNLTDLTYSNKRNGKRRTENTWAEDGLRWQKVRRTKSFLIMPGEENGKVRTEIMYMAKEDERRWWEKKTCKRRDHSREEQMLCNKGQGASARMAVVGMRVAAKKQVRWEVFTKDGSGFAEGVERPWAENKAREKEKKGEMEEESFTHVIWRVEPTVEKVWVNVLVGEAQYFLQASKGFWAHFVLCRNFFGRRWASSWRNSINFGWDCGLGIGKKAQFLFAIEVI

Homology

The following BLAST results are available for this feature:

BLAST of Bhi11M000410 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M000410 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M000410 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi11M000410 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..38

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi11G000410	Bhi11G000410	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi11M000410.exon1	Bhi11M000410.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi11M000410	cds.Bhi11M000410	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi11M000410	Bhi11M000410-protein	polypeptide