Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCAATATCTTCAACCTCCTCCATTTCCGCCGCCGTCTCCGCCGCCGTGGGAGGTGCTTCTTCTCGTTGCCGAACGCCTCGACCCAAAAACCCTCGCCACCGCCTCCTGCGTCTGCAAATCCTGGTCCATTTCCATGGCCTCCGACCATCTTTGGGAGCCAATTTTTACTGCCAATTTCACTTCTCTCTCTAACCTCGCCGTCTCCTCCGCCGCCACGTCACCATCTGTCTCCTTCCGCCGCCTCTTCGGCCTCGGCCACACCGCTGCAGCTCGTCGCCGTCCTGCTACCTTGAAACCCACCCTCTCCCTCTCTGACCTCGTCTTCGTCATCAGCATCTCCGACAAAGATCGTTGTGTTGTCAGAGGCGGAGCGAAGACGGAAGAGAAGGGTAATTCCTCCTCTTTTAAAATTATTTTGGTCTTTTAACTTGTTTTGTTCAATTAACTTTTCAAAAGGTATTTTTTCTTTTAAAAAAAAAAAAGAAATTTCGCAAAAGGTCTATTTTCTGGGAGAAATTACAGCGGTCGACAATTTTTCACTCAGATAGGGAGGGGGATTATTAGAGGCATGAAAATTATTAAATCTAAATGAACGGTTATTACGAAAGTAACTTTGAATAATTTCTCTTTTTTTTTTAAGCTTGTGGGGGAAAAAACTAATCATTTTTGGTAATTATCTCAATGGCTATTTTAATATAGAATTTTTAGAAGCAATCATTTTTATCTTAATATTAGCCTACTCAGTACTCATCCTCTAACTAAAATTTTGAATAATACGTCTCGATAATAATATGCTAGTACATATGATTGATGCTGCATTATTAATCATATTTTATAGGTTAAATTACAAATTTGGTTCAAGTTAGAATTTACCTCATTTTGGTGAATACAATTAGATAAAAATAAAGTATTTCCTATTTTGTAAGATTTTCATCAAACATTCTTACGAGTGGGGATCTAGAATTTTTATCGAGTAGCTCCAACAAGCTGGATACATACTAACCACTAAGCTAAAATAGCTTTTTTTTTTTGTGTTTATATTTGATTTTTTCTATACTAGTCCCTGCGCCTTAACTAAATTCGCCGTTGAATTCCAACTTTCGTCATTTTTTTTGGTACCTCAGTCTACTCTCTACAATTAGACAAAAAAAAAGTCTTCCTTTTTTTAGAATTCTCATCAAAGACTAATTCTAACCTCTAAAATGGAAAATGGACTACATTTTAACGGGTCGTCGAATATTTTGTTTTTTTAACTCTTTAGGTTAAAGAATCAAAATCTAATAATTTTTCATTTTCGGTAACTATATTAGAAGTATACTATAATTTGTATGAATAATAAATAGTAAACAACCATTCGTTGAGGAGTCCATTTGAATTTGAATACATGTATGTTAGTACATATATTTGGAGTTGCATTATCAATATTTTAAAGCATGATAAAGTTTATAACCAAAAAGTGTTAGTACATACATGTTTTTTTTTTTTGGGTACTGAGAAGTGTTTTTTTAAAAAAATTATTTTCGGGGGTTTGGAGACCAAAAGTGATTACTCTTTGAAAGTTTATAAACCAAATGTAATGTTGCTGGGACATTTATGGACCAAAATTGAAATCAAACCTTTTAAATCTTTCATTTTTCTAATTTATTCTCTCTATAATTTTAGAATTAACATATAATTCTGTTTGTATCAAAATTTCTAGCTCTATCCCAACCCATCCTCACCGCCGTGAAGCACGGCAGCGAGCTACCCGTGGACCGAAACGGGCTGTTCAAATTCGACATAAATCTCATCGACGACAAGAGCGGTATCGATCCGGTGGTGATCGGAGGGAGAGACGAGGTGGTGGTGGTGTGGAACGTGGTGTTGGAAGGGTGGAGGGCGGTTTTTACAATGATTGAATGTGGAGGAAGAGTGGGGATGGCTCCAAGAGCCGACGGGTGGTTCTCGGAGGAGCTGCCGGCGGCGGGGTGCTGTCCGAACGCCGTGAGCGGCGGAGTAGTGGCGGATCTGAAACTGGGGCTGTGTAGAAATGGAGAAAATAAGGTAAGGATTGAAAGTGTGAGTGTGGGAATGATGAGTGTTGTGAGTTGGAGATATGTGGGTTTGGATGATGGGCTAATGTACTTGCAACATTTTTTGTTCAATGCAAATGGTCTAATGTCTAATGTCTAA
mRNA sequence
ATGGCGCAATATCTTCAACCTCCTCCATTTCCGCCGCCGTCTCCGCCGCCGTGGGAGGTGCTTCTTCTCGTTGCCGAACGCCTCGACCCAAAAACCCTCGCCACCGCCTCCTGCGTCTGCAAATCCTGGTCCATTTCCATGGCCTCCGACCATCTTTGGGAGCCAATTTTTACTGCCAATTTCACTTCTCTCTCTAACCTCGCCGTCTCCTCCGCCGCCACGTCACCATCTGTCTCCTTCCGCCGCCTCTTCGGCCTCGGCCACACCGCTGCAGCTCGTCGCCGTCCTGCTACCTTGAAACCCACCCTCTCCCTCTCTGACCTCGTCTTCGTCATCAGCATCTCCGACAAAGATCGTTGTGTTGTCAGAGGCGGAGCGAAGACGGAAGAGAAGGCTCTATCCCAACCCATCCTCACCGCCGTGAAGCACGGCAGCGAGCTACCCGTGGACCGAAACGGGCTGTTCAAATTCGACATAAATCTCATCGACGACAAGAGCGGTATCGATCCGGTGGTGATCGGAGGGAGAGACGAGGTGGTGGTGGTGTGGAACGTGGTGTTGGAAGGGTGGAGGGCGGTTTTTACAATGATTGAATGTGGAGGAAGAGTGGGGATGGCTCCAAGAGCCGACGGGTGGTTCTCGGAGGAGCTGCCGGCGGCGGGGTGCTGTCCGAACGCCGTGAGCGGCGGAGTAGTGGCGGATCTGAAACTGGGGCTGTGTAGAAATGGAGAAAATAAGGTAAGGATTGAAAGTGTGAGTGTGGGAATGATGAGTGTTGTGAGTTGGAGATATGTGGGTTTGGATGATGGGCTAATGTACTTGCAACATTTTTTGTTCAATGCAAATGGTCTAATGTCTAATGTCTAA
Coding sequence (CDS)
ATGGCGCAATATCTTCAACCTCCTCCATTTCCGCCGCCGTCTCCGCCGCCGTGGGAGGTGCTTCTTCTCGTTGCCGAACGCCTCGACCCAAAAACCCTCGCCACCGCCTCCTGCGTCTGCAAATCCTGGTCCATTTCCATGGCCTCCGACCATCTTTGGGAGCCAATTTTTACTGCCAATTTCACTTCTCTCTCTAACCTCGCCGTCTCCTCCGCCGCCACGTCACCATCTGTCTCCTTCCGCCGCCTCTTCGGCCTCGGCCACACCGCTGCAGCTCGTCGCCGTCCTGCTACCTTGAAACCCACCCTCTCCCTCTCTGACCTCGTCTTCGTCATCAGCATCTCCGACAAAGATCGTTGTGTTGTCAGAGGCGGAGCGAAGACGGAAGAGAAGGCTCTATCCCAACCCATCCTCACCGCCGTGAAGCACGGCAGCGAGCTACCCGTGGACCGAAACGGGCTGTTCAAATTCGACATAAATCTCATCGACGACAAGAGCGGTATCGATCCGGTGGTGATCGGAGGGAGAGACGAGGTGGTGGTGGTGTGGAACGTGGTGTTGGAAGGGTGGAGGGCGGTTTTTACAATGATTGAATGTGGAGGAAGAGTGGGGATGGCTCCAAGAGCCGACGGGTGGTTCTCGGAGGAGCTGCCGGCGGCGGGGTGCTGTCCGAACGCCGTGAGCGGCGGAGTAGTGGCGGATCTGAAACTGGGGCTGTGTAGAAATGGAGAAAATAAGGTAAGGATTGAAAGTGTGAGTGTGGGAATGATGAGTGTTGTGAGTTGGAGATATGTGGGTTTGGATGATGGGCTAATGTACTTGCAACATTTTTTGTTCAATGCAAATGGTCTAATGTCTAATGTCTAA
Protein sequence
MAQYLQPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLSNLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISISDKDRCVVRGGAKTEEKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNANGLMSNV
Homology
BLAST of Tan0003886 vs. ExPASy Swiss-Prot
Match:
Q5EAF6 (Probable F-box protein At5g04010 OS=Arabidopsis thaliana OX=3702 GN=NSFBx PE=2 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21
Identity = 81/269 (30.11%), Postives = 124/269 (46.10%), Query Frame = 0
Query: 13 PSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLSNLAVSSA 72
PSPP WE+L LV +DP++LA ASCV +WS +S+ LW+ + + +
Sbjct: 50 PSPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSLPATRHSIFAKAITKEG 109
Query: 73 ATSPSVSFRRLFGLGHTAAARRR---PATLKPTLSLSDLVFVISISDKDRCVVRGGAKTE 132
A +S++RL +AA RRR PA +P +SLSDLVF++ +S G+K
Sbjct: 110 AKPAWLSYKRLISEAESAAKRRRNNQPA--EPKISLSDLVFIVHVS--------AGSKE- 169
Query: 133 EKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVVVWNVVLEG 192
VK G +L N F+ + ++ D D +V + WNVVL
Sbjct: 170 --------AVVVKQGKDLVFGSNERFQIEADVRDSGFTAD------MKDVSMSWNVVLRN 229
Query: 193 WRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGENKVRI 252
+ +F M E + GWF++ELP N G +G + N+ +
Sbjct: 230 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDG---SNLVGEVKPSFNEDVL 285
Query: 253 ESVSVGMMSVVSWRYVGLDDGLMYLQHFL 279
+ V + +W+ + +DD L YLQ FL
Sbjct: 290 DKVVFAIADSRNWKSLFVDDVLRYLQCFL 285
BLAST of Tan0003886 vs. NCBI nr
Match:
XP_022925168.1 (probable F-box protein At5g04010 [Cucurbita moschata])
HSP 1 Score: 434.1 bits (1115), Expect = 9.4e-118
Identity = 223/287 (77.70%), Postives = 243/287 (84.67%), Query Frame = 0
Query: 1 MAQYLQPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTAN 60
MAQ LQ PPPSPPPWEVLLLVAERLDP+TLATASCVCKSWSISMAS++LWEPIF+A
Sbjct: 1 MAQSLQ----PPPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAK 60
Query: 61 FTSLSNLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISISDKDR- 120
F SL+NLA SSA TSP VSFRRLFGLGHTAAARRRPA KP LSLSDLVFVIS+S D+
Sbjct: 61 FPSLTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILSLSDLVFVISVSGTDKA 120
Query: 121 --CVVRGGAKTEEKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRD 180
C+V GG K EEK + +P+ T VKHG EL VDRN LFKFDIN+ +G + VVIG +
Sbjct: 121 NGCIVSGGTKKEEKDVPEPMFTVVKHGGELAVDRNRLFKFDINV---SNGDEVVVIGAGE 180
Query: 181 EVVVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKL 240
EV VVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGG+VADLKL
Sbjct: 181 EVEVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKL 240
Query: 241 GLCRNGE----NKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFN 281
G+C+NGE +KVRIESVSVGMMSV+SWRYV LDDGLMYLQHFLFN
Sbjct: 241 GVCKNGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Tan0003886 vs. NCBI nr
Match:
XP_023518459.1 (probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 225/287 (78.40%), Postives = 244/287 (85.02%), Query Frame = 0
Query: 1 MAQYLQPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTAN 60
MAQ LQ PPPSPPPWEVLLLVAERLDP+TLATASCVCKSWSISMAS++LWEPIF+A
Sbjct: 1 MAQSLQ----PPPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAK 60
Query: 61 FTSLSNLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DK- 120
F SL+NLA SSA TSP VSFRRLFGLGHTAAARRRPA KP L LSDLVFVIS+S DK
Sbjct: 61 FPSLTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILCLSDLVFVISVSSTDKA 120
Query: 121 DRCVVRGGAKTEEKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRD 180
DRC+V GAK EEK + +P+ T VKHG EL VDRNGLFKFDIN+ + + VVIG +
Sbjct: 121 DRCIVGAGAKKEEKDVPEPMFTVVKHGGELAVDRNGLFKFDINV---SNSDEVVVIGAGE 180
Query: 181 EVVVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKL 240
EV VVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGG+VADLKL
Sbjct: 181 EVGVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKL 240
Query: 241 GLCRNGE----NKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFN 281
G+C+NGE +KVRIESVSVGMMSV+SWRYV LDDGLMYLQHFLFN
Sbjct: 241 GVCKNGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Tan0003886 vs. NCBI nr
Match:
XP_038883618.1 (probable F-box protein At5g04010 [Benincasa hispida])
HSP 1 Score: 426.8 bits (1096), Expect = 1.5e-115
Identity = 227/282 (80.50%), Postives = 239/282 (84.75%), Query Frame = 0
Query: 8 PPFPP-PSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLSN 67
PP P SPPPWEVLLLVAERLDPKTLATASCVCK WSISMASDHLWEPIFTANF SLSN
Sbjct: 3 PPLPSLSSPPPWEVLLLVAERLDPKTLATASCVCKFWSISMASDHLWEPIFTANFPSLSN 62
Query: 68 LAVSSAA-TSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DKDRCVVR 127
LA+SS+A TSP VSFRRLFGLGHTAAARRRPA KPTLSLSDL+FVISIS DKDR +V
Sbjct: 63 LAISSSAPTSPPVSFRRLFGLGHTAAARRRPAPSKPTLSLSDLIFVISISSTDKDRYIVG 122
Query: 128 GGAKTEEKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGI-DPVVIGGRDEVVVV 187
++KA Q ILT VKHG EL VDRNGLFKFDINL D PVVIGGR+EV VV
Sbjct: 123 HELVEKDKAPPQSILTVVKHGGELAVDRNGLFKFDINLDGDNGNKGGPVVIGGREEVEVV 182
Query: 188 WNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRN 247
WN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCC N VSGG+VADLKLGL N
Sbjct: 183 WNLVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCSNVVSGGIVADLKLGLRGN 242
Query: 248 --GENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNAN 283
G +KVRIESVSVGMMS+VSWRYV LDDGLMYLQHFLFNA+
Sbjct: 243 NGGGSKVRIESVSVGMMSIVSWRYVSLDDGLMYLQHFLFNAS 284
BLAST of Tan0003886 vs. NCBI nr
Match:
XP_008449214.1 (PREDICTED: probable F-box protein At5g04010 [Cucumis melo] >KAA0047228.1 putative F-box protein [Cucumis melo var. makuwa] >TYK21759.1 putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-115
Identity = 225/283 (79.51%), Postives = 241/283 (85.16%), Query Frame = 0
Query: 6 QPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLS 65
QP P SPPPWEV+LLVAERLDPKTLATASCVCKSWS+SMASDHLWEPIFTANF SL
Sbjct: 3 QPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLF 62
Query: 66 NLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DKDRCVVR 125
NLA S+ +SP VSFRRLFGLG+ AAARRRPA LKPTLSLSDLVFVISIS DKD+ ++
Sbjct: 63 NLA-SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIA 122
Query: 126 -GGAKTEEKA-LSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVV 185
G EEKA Q LT VKHG ELPV+RNGLFKFDINL +++G PVVIG R+EV V
Sbjct: 123 CDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINL--NENGAAPVVIGAREEVEV 182
Query: 186 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCR 245
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG+V DL+LGLC
Sbjct: 183 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 242
Query: 246 N--GENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNAN 283
N G NKVRIESVSVGMMSVVSWRYV LDDGLMYLQHFLFNAN
Sbjct: 243 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNAN 282
BLAST of Tan0003886 vs. NCBI nr
Match:
XP_031740421.1 (probable F-box protein At5g04010 [Cucumis sativus] >KAE8649452.1 hypothetical protein Csa_018886 [Cucumis sativus])
HSP 1 Score: 424.9 bits (1091), Expect = 5.7e-115
Identity = 225/283 (79.51%), Postives = 239/283 (84.45%), Query Frame = 0
Query: 6 QPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLS 65
QP P SPPPWEV+LLVAERLDPKTLATASCVCKSWS+SMASDHLWEPIFTANF SL
Sbjct: 3 QPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLF 62
Query: 66 NLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DKDRC-VV 125
NLA ++ ATSP VSFRRLFGLG+ AAARRRPA KP+LSLSDLVFVISIS +KDRC +
Sbjct: 63 NLA-TAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSIA 122
Query: 126 RGGAKTEEKA-LSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVV 185
G EEKA Q LT VKHG ELPVDRNGLFKFDINL ++ G PVVIG R+EV V
Sbjct: 123 CDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGA-PVVIGAREEVEV 182
Query: 186 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCR 245
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGG+V DL+LGLC
Sbjct: 183 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 242
Query: 246 N--GENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNAN 283
N G NKVRIESVSVGMMSVVSWRYV LDDGLMYLQHFLFNAN
Sbjct: 243 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNAN 283
BLAST of Tan0003886 vs. ExPASy TrEMBL
Match:
A0A6J1EEG3 (probable F-box protein At5g04010 OS=Cucurbita moschata OX=3662 GN=LOC111432489 PE=4 SV=1)
HSP 1 Score: 434.1 bits (1115), Expect = 4.5e-118
Identity = 223/287 (77.70%), Postives = 243/287 (84.67%), Query Frame = 0
Query: 1 MAQYLQPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTAN 60
MAQ LQ PPPSPPPWEVLLLVAERLDP+TLATASCVCKSWSISMAS++LWEPIF+A
Sbjct: 1 MAQSLQ----PPPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNNLWEPIFSAK 60
Query: 61 FTSLSNLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISISDKDR- 120
F SL+NLA SSA TSP VSFRRLFGLGHTAAARRRPA KP LSLSDLVFVIS+S D+
Sbjct: 61 FPSLTNLAASSATTSPPVSFRRLFGLGHTAAARRRPAPSKPILSLSDLVFVISVSGTDKA 120
Query: 121 --CVVRGGAKTEEKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRD 180
C+V GG K EEK + +P+ T VKHG EL VDRN LFKFDIN+ +G + VVIG +
Sbjct: 121 NGCIVSGGTKKEEKDVPEPMFTVVKHGGELAVDRNRLFKFDINV---SNGDEVVVIGAGE 180
Query: 181 EVVVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKL 240
EV VVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGG+VADLKL
Sbjct: 181 EVEVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKL 240
Query: 241 GLCRNGE----NKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFN 281
G+C+NGE +KVRIESVSVGMMSV+SWRYV LDDGLMYLQHFLFN
Sbjct: 241 GVCKNGEGGKNDKVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Tan0003886 vs. ExPASy TrEMBL
Match:
A0A5D3DEJ6 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1721G00070 PE=4 SV=1)
HSP 1 Score: 426.4 bits (1095), Expect = 9.5e-116
Identity = 225/283 (79.51%), Postives = 241/283 (85.16%), Query Frame = 0
Query: 6 QPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLS 65
QP P SPPPWEV+LLVAERLDPKTLATASCVCKSWS+SMASDHLWEPIFTANF SL
Sbjct: 3 QPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLF 62
Query: 66 NLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DKDRCVVR 125
NLA S+ +SP VSFRRLFGLG+ AAARRRPA LKPTLSLSDLVFVISIS DKD+ ++
Sbjct: 63 NLA-SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIA 122
Query: 126 -GGAKTEEKA-LSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVV 185
G EEKA Q LT VKHG ELPV+RNGLFKFDINL +++G PVVIG R+EV V
Sbjct: 123 CDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINL--NENGAAPVVIGAREEVEV 182
Query: 186 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCR 245
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG+V DL+LGLC
Sbjct: 183 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 242
Query: 246 N--GENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNAN 283
N G NKVRIESVSVGMMSVVSWRYV LDDGLMYLQHFLFNAN
Sbjct: 243 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNAN 282
BLAST of Tan0003886 vs. ExPASy TrEMBL
Match:
A0A1S3BLJ1 (probable F-box protein At5g04010 OS=Cucumis melo OX=3656 GN=LOC103491161 PE=4 SV=1)
HSP 1 Score: 426.4 bits (1095), Expect = 9.5e-116
Identity = 225/283 (79.51%), Postives = 241/283 (85.16%), Query Frame = 0
Query: 6 QPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLS 65
QP P SPPPWEV+LLVAERLDPKTLATASCVCKSWS+SMASDHLWEPIFTANF SL
Sbjct: 3 QPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLF 62
Query: 66 NLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DKDRCVVR 125
NLA S+ +SP VSFRRLFGLG+ AAARRRPA LKPTLSLSDLVFVISIS DKD+ ++
Sbjct: 63 NLA-SAPTSSPPVSFRRLFGLGYIAAARRRPAQLKPTLSLSDLVFVISISFTDKDQSIIA 122
Query: 126 -GGAKTEEKA-LSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVV 185
G EEKA Q LT VKHG ELPV+RNGLFKFDINL +++G PVVIG R+EV V
Sbjct: 123 CDGVNKEEKAPRPQSSLTVVKHGEELPVERNGLFKFDINL--NENGAAPVVIGAREEVEV 182
Query: 186 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCR 245
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGG+V DL+LGLC
Sbjct: 183 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGIVGDLRLGLCG 242
Query: 246 N--GENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNAN 283
N G NKVRIESVSVGMMSVVSWRYV LDDGLMYLQHFLFNAN
Sbjct: 243 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNAN 282
BLAST of Tan0003886 vs. ExPASy TrEMBL
Match:
A0A6J1HMX9 (probable F-box protein At5g04010 OS=Cucurbita maxima OX=3661 GN=LOC111466077 PE=4 SV=1)
HSP 1 Score: 424.9 bits (1091), Expect = 2.8e-115
Identity = 219/287 (76.31%), Postives = 239/287 (83.28%), Query Frame = 0
Query: 1 MAQYLQPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTAN 60
MAQ LQ PPPSPPPWEVLLLVAERLDP+TLATASCVCKSWSISMAS+HLWEPIF+A
Sbjct: 1 MAQSLQ----PPPSPPPWEVLLLVAERLDPRTLATASCVCKSWSISMASNHLWEPIFSAK 60
Query: 61 FTSLSNLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISISDKDR- 120
F SL+NLA SSA SP +SF RLFGLGHTAAARRRPA KP LSLSDL+FVIS+S D+
Sbjct: 61 FPSLTNLAASSATASPPLSFCRLFGLGHTAAARRRPAPSKPILSLSDLIFVISVSGTDKA 120
Query: 121 --CVVRGGAKTEEKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRD 180
C+V GGA EEK + + + T VKHG EL VDRNGLFKFDIN+ G + VVIG
Sbjct: 121 DGCIVGGGATKEEKDVPELMFTIVKHGGELVVDRNGLFKFDINV---SKGDEAVVIGAGG 180
Query: 181 EVVVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKL 240
EV VVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCP VSGG+VADLKL
Sbjct: 181 EVEVVWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPKEVSGGIVADLKL 240
Query: 241 GLCRNGE----NKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFN 281
G+C+NGE ++VRIESVSVGMMSV+SWRYV LDDGLMYLQHFLFN
Sbjct: 241 GVCKNGEGGKNDEVRIESVSVGMMSVLSWRYVSLDDGLMYLQHFLFN 280
BLAST of Tan0003886 vs. ExPASy TrEMBL
Match:
A0A0A0LDE5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G497390 PE=4 SV=1)
HSP 1 Score: 424.9 bits (1091), Expect = 2.8e-115
Identity = 225/283 (79.51%), Postives = 239/283 (84.45%), Query Frame = 0
Query: 6 QPPPFPPPSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLS 65
QP P SPPPWEV+LLVAERLDPKTLATASCVCKSWS+SMASDHLWEPIFTANF SL
Sbjct: 3 QPLPSLSSSPPPWEVILLVAERLDPKTLATASCVCKSWSLSMASDHLWEPIFTANFPSLF 62
Query: 66 NLAVSSAATSPSVSFRRLFGLGHTAAARRRPATLKPTLSLSDLVFVISIS--DKDRC-VV 125
NLA ++ ATSP VSFRRLFGLG+ AAARRRPA KP+LSLSDLVFVISIS +KDRC +
Sbjct: 63 NLA-TAPATSPHVSFRRLFGLGYIAAARRRPAQSKPSLSLSDLVFVISISFTNKDRCSIA 122
Query: 126 RGGAKTEEKA-LSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVV 185
G EEKA Q LT VKHG ELPVDRNGLFKFDINL ++ G PVVIG R+EV V
Sbjct: 123 CDGVNKEEKAPRPQSSLTIVKHGEELPVDRNGLFKFDINLNENGDGA-PVVIGAREEVEV 182
Query: 186 VWNVVLEGWRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCR 245
VWN+VLEGWR VFTMIECGGRVGMAPRADGWFSEELPAAGCCPN VSGG+V DL+LGLC
Sbjct: 183 VWNIVLEGWRGVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNVVSGGIVGDLRLGLCG 242
Query: 246 N--GENKVRIESVSVGMMSVVSWRYVGLDDGLMYLQHFLFNAN 283
N G NKVRIESVSVGMMSVVSWRYV LDDGLMYLQHFLFNAN
Sbjct: 243 NGGGSNKVRIESVSVGMMSVVSWRYVSLDDGLMYLQHFLFNAN 283
BLAST of Tan0003886 vs. TAIR 10
Match:
AT5G04010.1 (F-box family protein )
HSP 1 Score: 104.8 bits (260), Expect = 1.2e-22
Identity = 81/269 (30.11%), Postives = 124/269 (46.10%), Query Frame = 0
Query: 13 PSPPPWEVLLLVAERLDPKTLATASCVCKSWSISMASDHLWEPIFTANFTSLSNLAVSSA 72
PSPP WE+L LV +DP++LA ASCV +WS +S+ LW+ + + +
Sbjct: 50 PSPPSWEILCLVGPYMDPESLAVASCVSTTWSKCFSSEDLWKSLPATRHSIFAKAITKEG 109
Query: 73 ATSPSVSFRRLFGLGHTAAARRR---PATLKPTLSLSDLVFVISISDKDRCVVRGGAKTE 132
A +S++RL +AA RRR PA +P +SLSDLVF++ +S G+K
Sbjct: 110 AKPAWLSYKRLISEAESAAKRRRNNQPA--EPKISLSDLVFIVHVS--------AGSKE- 169
Query: 133 EKALSQPILTAVKHGSELPVDRNGLFKFDINLIDDKSGIDPVVIGGRDEVVVVWNVVLEG 192
VK G +L N F+ + ++ D D +V + WNVVL
Sbjct: 170 --------AVVVKQGKDLVFGSNERFQIEADVRDSGFTAD------MKDVSMSWNVVLRN 229
Query: 193 WRAVFTMIECGGRVGMAPRADGWFSEELPAAGCCPNAVSGGVVADLKLGLCRNGENKVRI 252
+ +F M E + GWF++ELP N G +G + N+ +
Sbjct: 230 YERMFLMSET--VIKSLDSMIGWFTDELPGT---KNRYCDG---SNLVGEVKPSFNEDVL 285
Query: 253 ESVSVGMMSVVSWRYVGLDDGLMYLQHFL 279
+ V + +W+ + +DD L YLQ FL
Sbjct: 290 DKVVFAIADSRNWKSLFVDDVLRYLQCFL 285
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q5EAF6 | 1.7e-21 | 30.11 | Probable F-box protein At5g04010 OS=Arabidopsis thaliana OX=3702 GN=NSFBx PE=2 S... | [more] |
Match Name | E-value | Identity | Description | |
XP_022925168.1 | 9.4e-118 | 77.70 | probable F-box protein At5g04010 [Cucurbita moschata] | [more] |
XP_023518459.1 | 1.6e-117 | 78.40 | probable F-box protein At5g04010 [Cucurbita pepo subsp. pepo] | [more] |
XP_038883618.1 | 1.5e-115 | 80.50 | probable F-box protein At5g04010 [Benincasa hispida] | [more] |
XP_008449214.1 | 2.0e-115 | 79.51 | PREDICTED: probable F-box protein At5g04010 [Cucumis melo] >KAA0047228.1 putativ... | [more] |
XP_031740421.1 | 5.7e-115 | 79.51 | probable F-box protein At5g04010 [Cucumis sativus] >KAE8649452.1 hypothetical pr... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EEG3 | 4.5e-118 | 77.70 | probable F-box protein At5g04010 OS=Cucurbita moschata OX=3662 GN=LOC111432489 P... | [more] |
A0A5D3DEJ6 | 9.5e-116 | 79.51 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... | [more] |
A0A1S3BLJ1 | 9.5e-116 | 79.51 | probable F-box protein At5g04010 OS=Cucumis melo OX=3656 GN=LOC103491161 PE=4 SV... | [more] |
A0A6J1HMX9 | 2.8e-115 | 76.31 | probable F-box protein At5g04010 OS=Cucurbita maxima OX=3661 GN=LOC111466077 PE=... | [more] |
A0A0A0LDE5 | 2.8e-115 | 79.51 | F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G497390 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT5G04010.1 | 1.2e-22 | 30.11 | F-box family protein | [more] |