Spg028057 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg028057
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	60S ribosomal protein L22-2
Location	scaffold2: 43612474 .. 43614383 (+)
RNA-Seq Expression	Spg028057
Synteny	Spg028057

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAGCTCATTTAGGGCTTCACTGGGCGGCCGTCGATATCTGAATCCTCAACTTCTCTGCAGCAACCGGTAATTGTATCTTCCTCTCTGATATATTGTTGCCAATGATCTGAAACTGTTTGTTTTTGTGCATCAATACATTGATTTTTCTTTCTGGTTGCAGAGATTTTTGATCGAAAATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGCTGGAGAAGTTTCTTCTGGAGAGGATTAAGGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCTGTCTCTGTTACTCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATAAGTTCTTTTTTTCCCATTTGAATCATTGGTTTAAGCTGGAATTTTTTCGTATTTTAATTGTAGTGTTGACATGAATTTTATGTTATGTTTATGGACGAAATATGAAAAGGAGTCGCTAGGTTTAAGATTTGTTACTTGTTAGCGTGTTTGTGAGATAAATCCAAAGGCCGCATTTAGATTTTGCCCTGGAGATAGTTTAGATATGTCAAAGTAAAGGAAAGGATAGGCATGTTATGTTTGATAATGGTTCTGTATAATGAGAATAATTGAAGGCAGTGAATTCCATTTGTAGAACTCTAGGGTGGGCATGAGGGCTATTTCGATTTACCAGTGCATCATTTTGGAGGGCTCTGGTTATAGAAGTTCTGGGTGGTTTTCTATTTCTATTTTTGAAGTTTGGGATGAAGTTGGTTGTTCATATTAGAACATTGGTGGTTGGTAGTTCTGTTCTGCTCTCGTGTTGAAAACACAGTGCTTGTAGTTTCATTGTTTAGCTTGTAACCTAAACCCAGTGAGCTTGTTATGTTTATGCTCATTGCATAGGTTTGTTTGTGAATATGACACACATAAATACAATACTGTGCTAGTGATTTGTTCTTTAGAATCAATTATTTAGCTTAGGATGTTCATTTTTGTCATAGTATTTATGTTGGGTACGTAGTTCTAGTGATTTGTGGTTTGCGATTGATTTAGCTTATTTCCCTCTCTTCCCTGAATGGAGTGATGTGGTCTAAATAAGCTAATCTTATCATAGTATTCTGTTTACATGGTTCTTGGAGTTTATATTTAAGTCTAGGTTTCTGATTTTAATGATATGTTCATTCCAACACGGAAAGATATGGGAACTTCTTTATTATAAAGATATAAGGATATAGTAATTCACAAATCAGACAACCTATGTACTCATTGGTGATGTTTGCCGATCTCAGGCAGCTGTAGAAATGTAATATCTGAATTTCATTAGTTTTTCTATCTGTTCTCCTGCCATCAGCCGTTGGGCCTTGGAGAACCATGCTGAACTCCTAATAATAACTTTTAAATTAGCTAAGGCAAAATAATTATGACTGATTTTATCTCGTGTTTGTTTGGTTAGGTATTTGAAGTACTTGACGAAGAAGTACCTGAAGAAACACAACGTGAGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTTTACGAACTCAGGTACTTCAACATAGCCGAGAATGAGGGAGAGGAAGAGGATTAAATTTATCAATTTAGACATTGCATTCAAGGAACAGGCGTCTTTATGTCAATTGACACTGTCATGTTTTGTTTACTAGTGTTGCTCGTGTGATGCTCTATTTTTATTCGAACTAATGCAGTTTAGCAATTTTGTTTTCGTTTACAGACTTAGATTGCTGTTATTTTTTTGTGTCATATTTGAGTAAGACCAACAATTTTTCACTTATAATCAGCAACATTTCACATACCTTATGGAATCAACGCGGATGGAAATGTTTGAC

mRNA sequence

ATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGCTGGAGAAGTTTCTTCTGGAGAGGATTAAGGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCTGTCTCTGTTACTCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATTTGAAGTACTTGACGAAGAAGTACCTGAAGAAACACAACGTGAGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTTTACGAACTCAGGTACTTCAACATAGCCGAGAATGAGGGAGAGGAAGAGGATTAA

Coding sequence (CDS)

ATGAGTCGAGGAGGTGCAGCCGGTCCCAAGGGGAAGAAGAAGGGAGTAACCTTCACAATCGACTGTTCGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCGCTGGAGAAGTTTCTTCTGGAGAGGATTAAGGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCTGTCTCTGTTACTCGTGAGAAGAGTAAAATTACCGTCACTTCTGACAGTAATTTCTCCAAGAGGTATTTGAAGTACTTGACGAAGAAGTACCTGAAGAAACACAACGTGAGAGATTGGCTACGAGTGATTGCTGCCAACAAAGATAGGAATGTTTACGAACTCAGGTACTTCAACATAGCCGAGAATGAGGGAGAGGAAGAGGATTAA

Protein sequence

MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED

Homology

[Close]

BLAST of Spg028057 vs. NCBI nr
Match: XP_022146066.1 (60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal protein L22-2 [Cucurbita moschata] >XP_022970154.1 60S ribosomal protein L22-2 [Cucurbita maxima] >XP_023530293.1 60S ribosomal protein L22-2 [Cucurbita pepo subsp. pepo] >XP_038880642.1 60S ribosomal protein L22-2 [Benincasa hispida])

HSP 1 Score: 241.5 bits (615), Expect = 3.8e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. NCBI nr
Match: KAG6588488.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.5 bits (615), Expect = 3.8e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 55  MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 114

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 115 REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 174

Query: 121 EEED 125
           EEED
Sbjct: 175 EEED 178

[Close]

BLAST of Spg028057 vs. NCBI nr
Match: KAG6590443.1 (60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.4 bits (612), Expect = 8.6e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 37  MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 96

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 97  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 156

Query: 121 EEED 125
           EEED
Sbjct: 157 EEED 160

[Close]

BLAST of Spg028057 vs. NCBI nr
Match: XP_004135607.1 (60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S ribosomal protein L22-2 [Cucumis melo] >KAA0050904.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa] >KAE8653365.1 hypothetical protein Csa_007558 [Cucumis sativus] >TYK10255.1 60S ribosomal protein L22-2 [Cucumis melo var. makuwa])

HSP 1 Score: 240.4 bits (612), Expect = 8.6e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. NCBI nr
Match: XP_022961443.1 (60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S ribosomal protein L22-2-like [Cucurbita maxima] >XP_023515962.1 60S ribosomal protein L22-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 8.6e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy Swiss-Prot
Match: Q9M9W1 (60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-56
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy Swiss-Prot
Match: Q9FE58 (60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy Swiss-Prot
Match: Q9SRX7 (Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-39
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

[Close]

BLAST of Spg028057 vs. ExPASy Swiss-Prot
Match: Q90YU6 (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 3.2e-33
Identity = 79/125 (63.20%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSV 60
           + +    G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  VS+
Sbjct: 4   LKKPAVKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSI 63

Query: 61  TREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENE 120
            R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+   YELRYF I ++E
Sbjct: 64  ERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKES--YELRYFQINQDE 123

Query: 121 GEEED 125
            EEED
Sbjct: 124 EEEED 126

[Close]

BLAST of Spg028057 vs. ExPASy Swiss-Prot
Match: P47198 (60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 4.2e-33
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 6   AAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKS 65
           A G K KK+ + FT+DC+ PVED IMD A+ E+FL ERIKV GKAG L G  V++ R KS
Sbjct: 9   AKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKS 68

Query: 66  KITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEGEEED 125
           KITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+   YELRYF I ++E EEED
Sbjct: 69  KITVTSEEPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKES--YELRYFQINQDEEEEED 126

[Close]

BLAST of Spg028057 vs. ExPASy TrEMBL
Match: A0A6J1I4P7 (60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy TrEMBL
Match: A0A6J1CY92 (60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy TrEMBL
Match: A0A6J1F0W8 (60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-60
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy TrEMBL
Match: A0A5A7U6J1 (60S ribosomal protein L22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004030 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.1e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDSVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. ExPASy TrEMBL
Match: A0A6J1HVX5 (60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467939 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 4.1e-60
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAAGPKGKKKGVTFTIDC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT
Sbjct: 1   MSRGGAAGPKGKKKGVTFTIDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG
Sbjct: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. TAIR 10
Match: AT3G05560.1 (Ribosomal L22e protein family )

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-57
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. TAIR 10
Match: AT3G05560.2 (Ribosomal L22e protein family )

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-57
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. TAIR 10
Match: AT3G05560.3 (Ribosomal L22e protein family )

HSP 1 Score: 219.5 bits (558), Expect = 1.5e-57
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRGGAA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++T
Sbjct: 1   MSRGGAAVAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVTIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENEG
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEG 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. TAIR 10
Match: AT5G27770.1 (Ribosomal L22e protein family )

HSP 1 Score: 217.2 bits (552), Expect = 7.2e-57
Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MSRGGAAGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVT 60
           MSRG AA  KGKKKGV+FTIDCSKPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+T
Sbjct: 1   MSRGNAAAAKGKKKGVSFTIDCSKPVDDKIMEIASLEKFLQERIKVGGKAGALGDSVSIT 60

Query: 61  REKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAENEG 120
           REKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN+YELRYFNIAENE 
Sbjct: 61  REKSKITVTADGQFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNLYELRYFNIAENEA 120

Query: 121 EEED 125
           EEED
Sbjct: 121 EEED 124

[Close]

BLAST of Spg028057 vs. TAIR 10
Match: AT1G02830.1 (Ribosomal L22e protein family )

HSP 1 Score: 163.7 bits (413), Expect = 9.5e-41
Identity = 85/126 (67.46%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MSRGGA--AGPKGKKKGVTFTIDCSKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVS 60
           M+R GA  +G   KKKGV+F IDCSKPV+D I++IA+LEKFL ERIKV GKAGALG++VS
Sbjct: 1   MARVGAKSSGAGAKKKGVSFVIDCSKPVDDTILEIATLEKFLQERIKVRGKAGALGNSVS 60

Query: 61  VTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYELRYFNIAEN 120
           +TR   KI V ++SNFSKRYLKYLTKKYLKK+N+RDWLRVIA+NKD+NVYE+RYF I + 
Sbjct: 61  ITRYNGKINVNANSNFSKRYLKYLTKKYLKKYNLRDWLRVIASNKDKNVYEVRYFRIDDE 120

Query: 121 EGEEED 125
               E+
Sbjct: 121 VASYEE 126

The following BLAST results are available for this feature:

BLAST of Spg028057 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146066.1	3.8e-60	100.00	60S ribosomal protein L22-2 [Momordica charantia] >XP_022933854.1 60S ribosomal ...	[more]
KAG6588488.1	3.8e-60	100.00	60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6590443.1	8.6e-60	99.19	60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004135607.1	8.6e-60	99.19	60S ribosomal protein L22-2 [Cucumis sativus] >XP_008450627.1 PREDICTED: 60S rib...	[more]
XP_022961443.1	8.6e-60	99.19	60S ribosomal protein L22-2-like [Cucurbita moschata] >XP_022968816.1 60S riboso...	[more]

BLAST of Spg028057 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9W1	2.0e-56	89.52	60S ribosomal protein L22-2 OS=Arabidopsis thaliana OX=3702 GN=RPL22B PE=2 SV=1	[more]
Q9FE58	1.0e-55	88.71	60S ribosomal protein L22-3 OS=Arabidopsis thaliana OX=3702 GN=RPL22C PE=2 SV=1	[more]
Q9SRX7	1.3e-39	67.46	Putative 60S ribosomal protein L22-1 OS=Arabidopsis thaliana OX=3702 GN=RPL22A P...	[more]
Q90YU6	3.2e-33	63.20	60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3	[more]
P47198	4.2e-33	65.00	60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2	[more]

BLAST of Spg028057 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I4P7	1.9e-60	100.00	60S ribosomal protein L22-2 OS=Cucurbita maxima OX=3661 GN=LOC111469134 PE=3 SV=...	[more]
A0A6J1CY92	1.9e-60	100.00	60S ribosomal protein L22-2 OS=Momordica charantia OX=3673 GN=LOC111015359 PE=3 ...	[more]
A0A6J1F0W8	1.9e-60	100.00	60S ribosomal protein L22-2 OS=Cucurbita moschata OX=3662 GN=LOC111441145 PE=3 S...	[more]
A0A5A7U6J1	4.1e-60	99.19	60S ribosomal protein L22-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1HVX5	4.1e-60	99.19	60S ribosomal protein L22-2-like OS=Cucurbita maxima OX=3661 GN=LOC111467939 PE=...	[more]

BLAST of Spg028057 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05560.1	1.5e-57	89.52	Ribosomal L22e protein family	[more]
AT3G05560.2	1.5e-57	89.52	Ribosomal L22e protein family	[more]
AT3G05560.3	1.5e-57	89.52	Ribosomal L22e protein family	[more]
AT5G27770.1	7.2e-57	88.71	Ribosomal L22e protein family	[more]
AT1G02830.1	9.5e-41	67.46	Ribosomal L22e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038526	Ribosomal protein L22e superfamily	GENE3D	3.30.1360.210		coord: 6..124 e-value: 6.6E-57 score: 192.7
IPR002671	Ribosomal protein L22e	PFAM	PF01776	Ribosomal_L22e	coord: 14..122 e-value: 1.5E-46 score: 157.2
IPR002671	Ribosomal protein L22e	PANTHER	PTHR10064	60S RIBOSOMAL PROTEIN L22	coord: 1..124
None	No IPR available	PANTHER	PTHR10064:SF16	60S RIBOSOMAL PROTEIN L22-2	coord: 1..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg028057.1	Spg028057.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome