Sed0028176 (gene) Chayote v1

Overview
NameSed0028176
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncasein kinase 1-like protein HD16
LocationLG05: 9904485 .. 9910886 (+)
RNA-Seq ExpressionSed0028176
SyntenySed0028176
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGTGCATCGCAGAGGCCGACCTAAGTGCTCCGACGAGCCTGGAAATCACTTGAAAACTCGGGCTGCGCTACCCAGGCCAACGACGAGATTGGTAATCAAAGAATTGGATAAGAATCAGCAGGAGGAGGTGATTGTTATATCTGAGAGGGATACTGGTTCGGAGGACGAAAACGTGATAGTGCTCGAGGAAGAAGATAAGGGCGCTATGGCTAATGAAAGTGGCGGTTTGAGTGCTAATAAGGCCGCTGGCGTAGAGCAAGAGGGTAGCTCGTCGCCGTTCCCCGAAAAGGTTGGTTTCTGTTTTAATACGTTATGGATTAGTCTACTTATTGTCAATGTTTCCTGTTTTCGATTTGCGCTAATAATGTGGTTGCCAAGTGATTTTAGGTAAATTGTGCTGTGTTGATTTTACAAATGAGAATTGGGGAAAAATAATCTCACTCTTTATTTTTCCATTGGATAGTGCTTATATACAACCAATAAAATAACTGCTCAGTTTGTTTTAATAAAAACTGATTTAACAACTAATCTAAACAATATCCACATTTCTAATACTCTCCCTAAAGATGGAAGGTGAACATTTTTCACTCCTATCTTGGACAGTAAGGGAAACAAAACAGAACCTGGTACTGGCTTAGTGAGTGCATCTGCTAGTTGGGAGTTGGAGCGAACATGTAGAAGCTTTAATTGACCGGAATTCAGCTGATCTCGTACAAAATGAAGATCTAGTTCGATGTGTTTGGTGCGCTCGTGATACATGGGATTAGTTGCGATGTGAATAGCAGCTTCATTGTCACAAAATAACACTAAGGGAGTTAAAGGAACACGAAGGTCCATGAGCAAAGAACGTAACCAGACGATTTCACAAGCAGTAAAAGCCAATGCCCGATATTCAGCTTCGACGGACGAGCGAGAAACGATAGATTGTTTCTTGGATTTCCAGGAAACCAAAGCACTACCTATGAAAACACAGTAACTTGTGGTTGATCGTAGGGTATCGGGGCAAAACGCCCAATCAGAGTCACTAAAAGCCCAAAGCTGGAAAGATTGAGAAGCTGGCAGGAAAATTCCTTGTCCAGGCGAGCCTTTAAGATATCGAAGAAGATGATATACAACAACGAGATGAGATTTTGTTGGCTTAGACACAAATTGACTCAAACGATTCACCGTGTAAGAAACATCATGATGCAAAATGGTCAAGTATAAGAGCTTTCCAATTAAGCGTCGATACATGGAGGCATCAGACAGAAGATCAACACCATCATGCTTTAGCTTCAACTTGGGGTCCATGAGACAGTTCTCCCGTTTGGAACCAAGGAGACCAACATCCTCTAAGAGTTGAAGTACATAGTGCCGTTACTGCAGGCTAGCTAAAGGCCAAGGAAAAATTTCAAGGGGCCCAGATCTTTTAGTTTAAAATGATCATGAAGAACCTTCTTTAAGAAGTTTAACAACTCAGAGTTAGCCCCAGTAAGAATGATATCATCCACGTACACAAGGAGTGCAACAAAAGACTCTCTAGAACCTCGTATAAACAGCGAGTAATCAGCATGGGATTGATGAAAATCGAGACTAAGCATGGTTTGTGTGAATTTTACAAACCATTGTCGAGAGGCTTGTTTAAGTTCATAAATGGACTTGTGTAAGCGACAAAAAAGCTTCTCACCCCCCTTATTAGGAACTTCCACCTTGTGTTTATAGCCTAGAGGCAGATCCTTGTACCATTCTTTCGTCAAGTCTCCATGCAAGAAGGCATTGTTCACATCTAGTTGCATAAGGGGCCAAACATAGGACACATCTAGAGTGAGGAGGACGCGTACCGTGACCAACTTAGCAACTAGGGAAAAAGTCTAGAAAATCAAGACCCTCTTATTGAGTGTAGCCCTTGGCTACGATACGGGCTTTATAGCATTCAATAGTGCCATCAGCACGATAGTTCACCTTGTAAACCCATTTGCATACTACAGAAGTCTTACGGTTAGGAAGGGGGACAATGCTTCAAGTGCGATTTTGTTCCAAAGCATTAAGTTCTGTTTGCATAGCTTCCTTCCAATGGTCATGAGGAATAGCTTGGTGGTAAAATTGTGGTTCATAGGTGGTGGAGAGGGCTAATGAAAAGGCACGGTGGGAGGAGGAAAGTTTGTCATAAGACAGATATTGATGAATGGGTATTTAGTGTGATAAGTGGGCAAAGGGTGATTGTGTAATAATGCACAATGGTAGTTTTGTAGATAGGTAGGTGGTTTTCTGGTTCTGGTGGTACGACGAAGAGGAACATGAGTAATGACATTGAATTCATTAGAGGAAATGGGTTGTGGCTCATTAGAAATGGGATTGTGGCTGGTTCTGATGTTCAGTGTGCTCAAATCAGGTGCAACAGAAGAAGGAAGTGGATTAGAAGCGTCATCATAAGCTGGAGAAATTGAAACGACTGGTGTATCCAGTTGAGTGTGGCTAAGATCGATGTCAACAGGGCTCGGTAAGACTAAGTTTGGAAATGGATCAGGTTGAGAAATGGAGGCCGATGATGTAGCAAACGGGAAGACGGCTTCATGAAAAACAACATCCCTGGAATTGAAGAATTGTTTCTTCTCAATGTTGTATAGACGATAAGCTTTCATGCCAGGAGGATAGCCAACAAATATACAGGTTGTAGCTCATGGAGCAAACTTTGATCAGTTGTGAGGCAAAGTGGATTCGTAACAAATACATCCAAGAACCCTTAAAGTGGCGTAGTCTGGTTCATGACCATGTAGAAAAAGGAAAGGAATAGACCACTTCAAGATCTTTGAAAGAGTTTGGTTGATCAGGAAAGGAATAGACCACTTCAAGATCTTTGATCGGTTGGTTGATATGCACCCTCCTCTCCTCCAGAACCTCGTTTCCCCTCCTATCGACCCTAGAATCTCCTCTTTGATTGAACTCCAGTCCCTATAAATCGTCAACCCAATTTCGGCCCCGATCGTTCCAACCATCATGCGCTAACGGTCTGTCATAGTCGATACGCACCCTCCTCTCTTCTCGTAACCTGTCGCCCCTCCGGTCAAACCTAGAATTTCCCTAACGATCAAAATCTGGTCTAGGTCGATTTCCTCGTTCCCATTCCCACGTAACTCCTCTTTCCGGTCCAACTCGAATAGCCTAGACCGTCCTAGTCTAGCCAGCCCACTTGCACACAGCCTACCCGTACCCCACTTGAGCTGGCCACACTTGACCCACCTCAACAGCCCCGGCCCCTATTCGCGTGCCACGACCCCACATCGCCGAGCCCATGCGCAACACCGAGACCTGCTCCACAGTGCAGCCCGGCCCCGCACCCCAGTGTCCTAGCTCCCCCCCCTCCCCACGTGCAAACCCTCCGTGGCCACCACACCCGTGCTTCCATGCTCGAGCTCTTCGATAACACCAACCGCGCCCACCTCTGTACCTGCTATCGTGCCTCCGGGTTCCGCCATCGAGTCCTTTCTTCATGCCAGCCGCTGCCCTATTCACTTCAACCGTCGAATCCACGTCGGGTACCTTGATCACAATTCCCTTCCCTTTATCCGCTTTGTTCAAATCCATCAACAATTGCAGATTCCAGTTTAACATCTCGAATTTTAAATCAAACTTCGCATCTTGCTGCTCAAATTTCAAATCCATTTTTCCCCTAATCGTTCTCCCATTGATTCCATCTTCACTTCCAATTCCCGTTGCTTATTCAACAATTCGGCTAATTTCTCTTCGCATTCTTGAATCCTTGTTTCCATCCTAGTCGAGACCATTCCCGGATCGGCAAACGGCTCTGATACCAAAATGATAGAATTTACCACACTTTTTATTAAACTACTATAAATCTCCCGAGAGAATCTCTCTAAGAGCCAGAGTACAAAGACAACAACTGATTGAATGCCTAACAATGACCTAACATCTCCTATTTATAACCCTAAACCCTAGCCTCTAACTTACTCCACAAGTAAACCTAATAATAACTTAATTTAAGAAAAGACTAATAATAGGCCCAAGCCTAATACAATTAAAATAGCAATTAATAATAAATACTAATAATACTAATAGTTATTGGGCCAAATCGTATCAGAATTATAGACTACTCTGCAATCAGCATAATATTATTTTGAATGATAGGGGAAGGGAAGGGGTATTGAGCTAAGCTGACATTCATTCCCTTGAAACTATCTAATGACATGTTCTCAAGTTACTTGTTTTCTATGGTGATAGGTATCATTATAATGTAGCTGATGCAAGATTGTCACAACATGTGGAGAGAGGAGTTGCAGATGGTTTACTTATTAGTTCTGTGACATCTTGTTCAAATCTTTGGGCATTAATCATGGATGCAGGAACTGGGTTTACAAGTCAATTTTATGAGCTCTCTCCCCGTTTTTTGCACAAGGTCATTTTCGCTCTTTGAAGTTTGAAATCAATTTTGCATCATTGAAGTCTTAAATTTCCTGTAATATTCCATGAAATGTTTATTAAATTTGATATAAAAAGCAGGAATGGATAATGGAACAGTGGGAAAAGAATTATTACATCAGTTCTAATACTGGTGCTAATAATGGAAGCTCCCTGGTAATGATGTCAAAAGGTACGTTTGCTTCAAATATGTTTAATTTGAAATTGGTCGTTGTTTTGTAGGCTAATAGTTTTTCTCCTCGTGTCCTGGACTCGTTACTGTGATCAATCGTAAGTACCTTGTTATCTAGGTTTCTTGCGTTTATCTTTATCCTACTTATGCAAGGACCCAATTTACCCAACAATCATACAAAGTGAGTGATTCTCTCCCCCTTCAAGTGGATAAACAAGAAATGGAAGGAAGGATTTCACGTGACTTCAATGGCAACTGTAGGAAGCCGATGAGGAGTTGTCTTGTAACGCAATGCTGGTTTTAGTGACCAGGTTTAGTTTTGTTTATGTTCTTTAGCATCTGTGGTTAATTCTGTTTCTGTTAATTATGTTGTGATATTTGTTATCTCAATTGATAGCTTAACAACACTAGTAGTCAAAGATGGCTTAAGGCTTTGCTTTGGGATTTAAGAGGTTATGGGTTTTCAATCTAGCGTGGTCATCCCACCTACCTAGAAATTAATTTTATAGGAATTTCCTTGACATCGAAATAATGCAGGGTCAGGAAGTTTTTGTTATTGCTTAGACACTCACAAATATATATACCTCAGAAAATGAAAACCTTTTTATGCATGAAAAATTACAAAAAATCCTATCGAAATACATAGAGAACTATTTCACTGAGCAATTAGGTGGTGGTTAAATCATAAATACTGTAAATCAAGATCAGTTGTAATAGGATGTTCCATACATACTGTCTTTATTTAGTTTAGGGAGTTGAATCAAGCAAAACAATCTTTAACTATACCGTAGTTTTTATACTGTACTAGGATCCGTAACAGAAAGTTAGTTGCAGGTTTATTGCAATAACTTCTCTATATAAGGATCAGTAGGTAGAACGGTTTATGAAGTCAAGAAGTGAGCATCTTTAGTGAAAATTACAGATGTAAGATTGTAGTTTGAGAGCTCCAAGAAACCCATTTGTGTTCTTGAGAAATTCCATAGTAAATACTATTTGAATCTTGCTCTTCACAGTGGATTAGCCCGATTTTGGGTGAACCACTTACATCTTGTGTCAACTCTCTCAATCCCTTCTCTATCTCTTTACTTTCCCGCACGTTCTTGAGTGTTTCTCCTTATTCTTCACTGAAAAGAGAGAAGAGAGAAAGAAAGAAGAAAGAAGAAGAATTTTTCGATCATACCTTTGTACACGCTGCTGCTGCTCGTTATTAGTTCAATTCGATATCGCAATTCCGCACGAGAGAAGCCAAGAAAAACGCCTCCTACGGTGGGTTTTGGACTTCCTCATCATTTCACAAATTCTCAACAAATACAAAAAAGGGTAAAGATGATGACCGCAAAGTAAATCAAAATAAATCATGGATTCCAAGTGATCGCCAAATTGTTGTTGTGTGTCCGGTCATTGAAGAGGTTCTGCCAAAGAGTCTTTTTTGTCCTTGGAAGGATGTCCCCAAGGGGTGGTACCGTGGTTGAAGACTTGGATTTTGAAGTTATGCTCCTTTTAAAATCCCAAGTTCGAGACTCGCCTGTGACATTACTCCTTCGATGTTTCCGGTGTCTGGCCTAGGGACGGGCGTGGTTACCCTTGTTTCAAAAAAAAAAGAAAGCAAATATTGGATGAGTAGCTTTATGTCCTTATAAAAAAAAATTTCATTCTTGATGTGCATGTTTTTATTTTCCTATTCCAACCTTCTATTTCTTGATGTGTGTGTGTGTGTCATCCTCTTTGTGAATGTTGTTTTCAGCACCAACGTCGTTTGTTTATTTTTTAGGCATCTTGTGCATGAATTATGATATGTTCTTGGAGTAG

mRNA sequence

ATGCCGGTGCATCGCAGAGGCCGACCTAAGTGCTCCGACGAGCCTGGAAATCACTTGAAAACTCGGGCTGCGCTACCCAGGCCAACGACGAGATTGGTAATCAAAGAATTGGATAAGAATCAGCAGGAGGAGGTGATTGTTATATCTGAGAGGGATACTGGTTCGGAGGACGAAAACGTGATAGTGCTCGAGGAAGAAGATAAGGGCGCTATGGCTAATGAAAGTGGCGGTTTGAGTGCTAATAAGGCCGCTGGCGTAGAGCAAGAGGGTAGCTCGTCGCCGTTCCCCGAAAAGGAATGGATAATGGAACAGTGGGAAAAGAATTATTACATCAGTTCTAATACTGGTGCTAATAATGGAAGCTCCCTGGTAATGATGTCAAAAGGCATCTTGTGCATGAATTATGATATGTTCTTGGAGTAG

Coding sequence (CDS)

ATGCCGGTGCATCGCAGAGGCCGACCTAAGTGCTCCGACGAGCCTGGAAATCACTTGAAAACTCGGGCTGCGCTACCCAGGCCAACGACGAGATTGGTAATCAAAGAATTGGATAAGAATCAGCAGGAGGAGGTGATTGTTATATCTGAGAGGGATACTGGTTCGGAGGACGAAAACGTGATAGTGCTCGAGGAAGAAGATAAGGGCGCTATGGCTAATGAAAGTGGCGGTTTGAGTGCTAATAAGGCCGCTGGCGTAGAGCAAGAGGGTAGCTCGTCGCCGTTCCCCGAAAAGGAATGGATAATGGAACAGTGGGAAAAGAATTATTACATCAGTTCTAATACTGGTGCTAATAATGGAAGCTCCCTGGTAATGATGTCAAAAGGCATCTTGTGCATGAATTATGATATGTTCTTGGAGTAG

Protein sequence

MPVHRRGRPKCSDEPGNHLKTRAALPRPTTRLVIKELDKNQQEEVIVISERDTGSEDENVIVLEEEDKGAMANESGGLSANKAAGVEQEGSSSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKGILCMNYDMFLE
Homology
[Close]
BLAST of Sed0028176 vs. NCBI nr
Match: XP_022153809.1 (casein kinase 1-like protein HD16 [Momordica charantia])

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-24
Identity = 75/110 (68.18%), Postives = 85/110 (77.27%), Query Frame = 0 

Query: 5   RRGR----PKCSDEP---GNHLKTRAAL--------PRPTTRLVIKELDKNQQEEVIVIS 64
           RRGR    PK SDEP   GN++KTRAAL        PRP TRL I+EL+KNQ +EVIVIS
Sbjct: 9   RRGRARILPKRSDEPPRVGNYVKTRAALAREAAEARPRPRTRLAIRELNKNQDDEVIVIS 68

Query: 65  ERDTGSEDENVIVL-EEEDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           ERDTG ED+ V  L EEEDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 69  ERDTGLEDKKVQELQEEEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 118

[Close]
BLAST of Sed0028176 vs. NCBI nr
Match: XP_022153809.1 (casein kinase 1-like protein HD16 [Momordica charantia])

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 525 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 559


HSP 2 Score: 117.5 bits (293), Expect = 9.4e-23
Identity = 70/115 (60.87%), Postives = 82/115 (71.30%), Query Frame = 0 

Query: 1   MPVHRRGRPKC-------SDEPGNHLKTRAAL--------PRPTTRLVIKELDKNQQEEV 60
           MPV RRGR +           PGN++KTRAA+        PRP TRL +KEL+ NQ ++V
Sbjct: 1   MPVLRRGRARIVQNRFEEPPRPGNYVKTRAAVAREAAEARPRPRTRLAVKELNNNQDDQV 60

Query: 61  IVISERDTGSEDENVIVLEE--EDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           IVISERDTG ED  V  LEE  EDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  IVISERDTGLEDRKVQGLEEEQEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 115

[Close]
BLAST of Sed0028176 vs. NCBI nr
Match: XP_022995726.1 (casein kinase 1-like protein HD16 [Cucurbita maxima])

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 522 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 556


HSP 2 Score: 114.4 bits (285), Expect = 8.0e-22
Identity = 71/119 (59.66%), Postives = 83/119 (69.75%), Query Frame = 0 

Query: 1   MPVHRRG-----------RPKCSDEPGNHLKTRAAL--------PRPTTRLVIKELDKNQ 60
           MPV RRG           R +    PGN++KTRAA+        PRP TRL IKEL+ NQ
Sbjct: 1   MPVLRRGVRRGRARIVQNRFEEPPRPGNYVKTRAAVAREAAEARPRPRTRLAIKELNNNQ 60

Query: 61  QEEVIVISERDTGSEDENVIVLEE--EDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           +++VIVISERDTG ED  V  LEE  EDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  EDQVIVISERDTGLEDRKVQGLEEEQEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 119

[Close]
BLAST of Sed0028176 vs. NCBI nr
Match: XP_022958130.1 (casein kinase 1-like protein HD16 [Cucurbita moschata])

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 526 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 560


HSP 2 Score: 113.6 bits (283), Expect = 1.4e-21
Identity = 71/119 (59.66%), Postives = 82/119 (68.91%), Query Frame = 0 

Query: 1   MPVHRRG-----------RPKCSDEPGNHLKTRAAL--------PRPTTRLVIKELDKNQ 60
           MPV RRG           R +    PGN++KTRAA+        PRP TRL IKEL+ NQ
Sbjct: 1   MPVLRRGVRRGRARIVQNRFEEPPRPGNYVKTRAAVAREAAEARPRPRTRLAIKELNNNQ 60

Query: 61  QEEVIVISERDTGSEDENVIVLEE--EDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
            ++VIVISERDTG ED  V  LEE  EDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  DDQVIVISERDTGLEDRKVQGLEEEQEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 119

[Close]
BLAST of Sed0028176 vs. NCBI nr
Match: XP_023533433.1 (casein kinase 1-like protein HD16 [Cucurbita pepo subsp. pepo] >KAG6605876.1 Casein kinase 1-like protein HD16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035827.1 Casein kinase 1-like protein HD16 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 526 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 560


HSP 2 Score: 111.7 bits (278), Expect = 5.2e-21
Identity = 72/122 (59.02%), Postives = 85/122 (69.67%), Query Frame = 0 

Query: 1   MPVHRRG--------RPKCSDEP---GNHLKTRAAL--------PRPTTRLVIKELDKNQ 60
           MPV RRG          K  +EP   G +++TRAA+        PRP TRL IKEL+KNQ
Sbjct: 1   MPVLRRGVRRGRARIVQKHFEEPPRAGTYVRTRAAVAREAAEARPRPRTRLAIKELNKNQ 60

Query: 61  QEEVIVISERDTGSEDENVIVL-----EEEDKGAMANESGGLSANKAAGVEQEGSSSPFP 99
           ++EVIVISERDTG ED+ V  L     EEEDKGAM +ESGGLSANKAAG+E+EGSS+PFP
Sbjct: 61  EDEVIVISERDTGFEDKKVQGLEEEEEEEEDKGAMGDESGGLSANKAAGIEEEGSSAPFP 120

[Close]
BLAST of Sed0028176 vs. ExPASy Swiss-Prot
Match: Q852L0 (Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-08
Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 92  SSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           S  F  K+WIMEQWEKNYYI++  GA NGSSLV+MSKG
Sbjct: 536 SQVFLHKDWIMEQWEKNYYITAIAGATNGSSLVVMSKG 573

[Close]
BLAST of Sed0028176 vs. ExPASy TrEMBL
Match: A0A6J1DK66 (casein kinase 1-like protein HD16 OS=Momordica charantia OX=3673 GN=LOC111021235 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 75/110 (68.18%), Postives = 85/110 (77.27%), Query Frame = 0 

Query: 5   RRGR----PKCSDEP---GNHLKTRAAL--------PRPTTRLVIKELDKNQQEEVIVIS 64
           RRGR    PK SDEP   GN++KTRAAL        PRP TRL I+EL+KNQ +EVIVIS
Sbjct: 9   RRGRARILPKRSDEPPRVGNYVKTRAALAREAAEARPRPRTRLAIRELNKNQDDEVIVIS 68

Query: 65  ERDTGSEDENVIVL-EEEDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           ERDTG ED+ V  L EEEDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 69  ERDTGLEDKKVQELQEEEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 118

[Close]
BLAST of Sed0028176 vs. ExPASy TrEMBL
Match: A0A6J1DK66 (casein kinase 1-like protein HD16 OS=Momordica charantia OX=3673 GN=LOC111021235 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 525 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 559


HSP 2 Score: 117.5 bits (293), Expect = 4.6e-23
Identity = 70/115 (60.87%), Postives = 82/115 (71.30%), Query Frame = 0 

Query: 1   MPVHRRGRPKC-------SDEPGNHLKTRAAL--------PRPTTRLVIKELDKNQQEEV 60
           MPV RRGR +           PGN++KTRAA+        PRP TRL +KEL+ NQ ++V
Sbjct: 1   MPVLRRGRARIVQNRFEEPPRPGNYVKTRAAVAREAAEARPRPRTRLAVKELNNNQDDQV 60

Query: 61  IVISERDTGSEDENVIVLEE--EDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           IVISERDTG ED  V  LEE  EDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  IVISERDTGLEDRKVQGLEEEQEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 115

[Close]
BLAST of Sed0028176 vs. ExPASy TrEMBL
Match: A0A6J1K2Q3 (casein kinase 1-like protein HD16 OS=Cucurbita maxima OX=3661 GN=LOC111491174 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 522 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 556


HSP 2 Score: 114.4 bits (285), Expect = 3.9e-22
Identity = 71/119 (59.66%), Postives = 83/119 (69.75%), Query Frame = 0 

Query: 1   MPVHRRG-----------RPKCSDEPGNHLKTRAAL--------PRPTTRLVIKELDKNQ 60
           MPV RRG           R +    PGN++KTRAA+        PRP TRL IKEL+ NQ
Sbjct: 1   MPVLRRGVRRGRARIVQNRFEEPPRPGNYVKTRAAVAREAAEARPRPRTRLAIKELNNNQ 60

Query: 61  QEEVIVISERDTGSEDENVIVLEE--EDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           +++VIVISERDTG ED  V  LEE  EDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  EDQVIVISERDTGLEDRKVQGLEEEQEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 119

[Close]
BLAST of Sed0028176 vs. ExPASy TrEMBL
Match: A0A6J1H2K3 (casein kinase 1-like protein HD16 OS=Cucurbita moschata OX=3662 GN=LOC111459452 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 526 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 560


HSP 2 Score: 111.3 bits (277), Expect = 3.3e-21
Identity = 73/118 (61.86%), Postives = 83/118 (70.34%), Query Frame = 0 

Query: 1   MPVHRRG--------RPKCSDEP---GNHLKTRAAL--------PRPTTRLVIKELDKNQ 60
           MPV RRG          K   EP   G ++KTRAA+        PRP TRL IKEL+KNQ
Sbjct: 1   MPVLRRGVRRGRGRIVQKHFQEPPPAGAYVKTRAAVAREAAEARPRPRTRLAIKELNKNQ 60

Query: 61  QEEVIVISERDTGSEDENVIVLE-EEDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           +EEVIVISERDT  ED+ V  LE EEDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  EEEVIVISERDTDLEDKKVQGLEVEEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 118

[Close]
BLAST of Sed0028176 vs. ExPASy TrEMBL
Match: A0A6J1J978 (casein kinase 1-like protein HD16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483733 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.1e-07
Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 95  FPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           F  KEWIMEQWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 526 FLHKEWIMEQWEKNYYISSIAGANNGSSLVVMSKG 560


HSP 2 Score: 111.3 bits (277), Expect = 3.3e-21
Identity = 73/118 (61.86%), Postives = 83/118 (70.34%), Query Frame = 0 

Query: 1   MPVHRRG--------RPKCSDEP---GNHLKTRAAL--------PRPTTRLVIKELDKNQ 60
           MPV RRG          K   EP   G ++KTRAA+        PRP TRL IKEL+KNQ
Sbjct: 1   MPVLRRGVRRGRGRIVQKHFQEPPPAGAYVKTRAAVAREAAEARPRPRTRLAIKELNKNQ 60

Query: 61  QEEVIVISERDTGSEDENVIVLE-EEDKGAMANESGGLSANKAAGVEQEGSSSPFPEK 99
           +EEVIVISERDT  ED+ V  LE EEDKGAM +ESGGLSANKAAG+E+EGSS+PFPEK
Sbjct: 61  EEEVIVISERDTDLEDKKVQGLEVEEDKGAMGDESGGLSANKAAGIEEEGSSAPFPEK 118

[Close]
BLAST of Sed0028176 vs. TAIR 10
Match: AT3G03940.1 (Protein kinase family protein )

HSP 1 Score: 65.1 bits (157), Expect = 5.2e-11
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 92  SSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           SS F  K+WIMEQWEKNYYISS  GANNGSSLV+M+KG
Sbjct: 530 SSVFLHKDWIMEQWEKNYYISSIAGANNGSSLVVMAKG 567

[Close]
BLAST of Sed0028176 vs. TAIR 10
Match: AT3G03930.1 (protein kinase-related )

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-11
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 92  SSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           SS F  K+WIM+QWEKNYYISS  GANNGSSLV+MSKG
Sbjct: 117 SSTFLPKDWIMKQWEKNYYISSIAGANNGSSLVVMSKG 154

[Close]
BLAST of Sed0028176 vs. TAIR 10
Match: AT3G13670.1 (Protein kinase family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0 

Query: 92  SSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           S  F  KEWIMEQWEKNYYISS  GA+NGSSLV+MSKG
Sbjct: 532 SPVFLHKEWIMEQWEKNYYISSIAGASNGSSLVVMSKG 569

[Close]
BLAST of Sed0028176 vs. TAIR 10
Match: AT5G18190.1 (Protein kinase family protein )

HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 92  SSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           S+ F  K+WIMEQWEKNYYISS  G++NG+SLV+MSKG
Sbjct: 520 STVFLHKDWIMEQWEKNYYISSIAGSDNGNSLVVMSKG 557

[Close]
BLAST of Sed0028176 vs. TAIR 10
Match: AT2G25760.1 (Protein kinase family protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09
Identity = 26/38 (68.42%), Postives = 31/38 (81.58%), Query Frame = 0 

Query: 92  SSPFPEKEWIMEQWEKNYYISSNTGANNGSSLVMMSKG 130
           S  F  KEWIMEQWEKNYYI++  GAN+G+S V+MSKG
Sbjct: 502 SPSFLHKEWIMEQWEKNYYITAVAGANSGNSFVVMSKG 539

The following BLAST results are available for this feature:
BLAST of Sed0028176 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022153809.12.9e-2468.18casein kinase 1-like protein HD16 [Momordica charantia][more]
XP_022153809.14.3e-0785.71casein kinase 1-like protein HD16 [Momordica charantia][more]
XP_022995726.14.3e-0785.71casein kinase 1-like protein HD16 [Cucurbita maxima][more]
XP_022958130.14.3e-0785.71casein kinase 1-like protein HD16 [Cucurbita moschata][more]
XP_023533433.14.3e-0785.71casein kinase 1-like protein HD16 [Cucurbita pepo subsp. pepo] >KAG6605876.1 Cas... [more]

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BLAST of Sed0028176 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q852L02.3e-0871.05Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD... [more]
BLAST of Sed0028176 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DK661.4e-2468.18casein kinase 1-like protein HD16 OS=Momordica charantia OX=3673 GN=LOC111021235... [more]
A0A6J1DK662.1e-0785.71casein kinase 1-like protein HD16 OS=Momordica charantia OX=3673 GN=LOC111021235... [more]
A0A6J1K2Q32.1e-0785.71casein kinase 1-like protein HD16 OS=Cucurbita maxima OX=3661 GN=LOC111491174 PE... [more]
A0A6J1H2K32.1e-0785.71casein kinase 1-like protein HD16 OS=Cucurbita moschata OX=3662 GN=LOC111459452 ... [more]
A0A6J1J9782.1e-0785.71casein kinase 1-like protein HD16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]

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BLAST of Sed0028176 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03940.15.2e-1178.95Protein kinase family protein [more]
AT3G03930.16.8e-1178.95protein kinase-related [more]
AT3G13670.11.5e-1078.95Protein kinase family protein [more]
AT5G18190.19.8e-1071.05Protein kinase family protein [more]
AT2G25760.13.7e-0968.42Protein kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0028176.1Sed0028176.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006897 endocytosis
biological_process GO:0018105 peptidyl-serine phosphorylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0004674 protein serine/threonine kinase activity