Sed0023448 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGAAAAATTGGCGACCACCAAGGGACCATATATTGAAAATCAATACTGATGCAACAATTTATCTTCAAGCTAATAGATGTGGAATTGGGGTGATTGTGCGTAACAAGAAGGGGGAGGTAATGTTCTCTTCTTGTTGAACGATTACAGGAGTTGTGGATTCAGAAATTGCCGAAGCTTTAGCAGTTCAAGAGGGAGTAGCAATGGCTGTGGATTTGGGTTTCAGGGAGGTTGAAGTGGAAACGGATGCATCTCGTGTTGCTGCTTTTCTTAAAAAGTGTGAGTTTAGTAGAACTGAAGTGGGTTTTATCATAGACGAGACTTTGACCTTAGTTGCAGCATTAACGAAGGTATCCTTTTCATGGTGTGCAAGAGATTCCAACGGTCTTGCTCATCACCTAGCTCGTATGGCAGCAGAAAAGGTTTTGAATGCTAGTTGGATGGAAGATGTTCCAGAGAATCTCAGAGAAGATTACATACTTGAAATGACGAATTCTCTTGTCCAAGAAAGGGAGGGAGTCTCCTGCCTTAATCTTTTGTTACTGTGTACTTCAAAAAAAAAAAAAGTTAAATGTTAA ATGGAAAGGAAAAATTGGCGACCACCAAGGGACCATATATTGAAAATCAATACTGATGCAACAATTTATCTTCAAGCTAATAGATGTGGAATTGGGGTGATTGTGCGAGTTGTGGATTCAGAAATTGCCGAAGCTTTAGCAGTTCAAGAGGGAGTAGCAATGGCTGTGGATTTGGGTTTCAGGGAGGTTGAAGTGGAAACGGATGCATCTCGTGTTGCTGCTTTTCTTAAAAAGTGTGAGTTTAGTAGAACTGAAGTGGGTTTTATCATAGACGAGACTTTGACCTTAGTTGCAGCATTAACGAAGGTATCCTTTTCATGGTGTGCAAGAGATTCCAACGGTCTTGCTCATCACCTAGCTCGTATGGCAGCAGAAAAGGTTTTGAATGCTAGTTGGATGGAAGATGTTCCAGAGAATCTCAGAGAAGATTACATACTTGAAATGACGAATTCTCTTGTCCAAGAAAGGGAGGGAGTCTCCTGCCTTAATCTTTTGTTACTGTGTACTTCAAAAAAAAAAAAAGTTAAATGTTAA ATGGAAAGGAAAAATTGGCGACCACCAAGGGACCATATATTGAAAATCAATACTGATGCAACAATTTATCTTCAAGCTAATAGATGTGGAATTGGGGTGATTGTGCGAGTTGTGGATTCAGAAATTGCCGAAGCTTTAGCAGTTCAAGAGGGAGTAGCAATGGCTGTGGATTTGGGTTTCAGGGAGGTTGAAGTGGAAACGGATGCATCTCGTGTTGCTGCTTTTCTTAAAAAGTGTGAGTTTAGTAGAACTGAAGTGGGTTTTATCATAGACGAGACTTTGACCTTAGTTGCAGCATTAACGAAGGTATCCTTTTCATGGTGTGCAAGAGATTCCAACGGTCTTGCTCATCACCTAGCTCGTATGGCAGCAGAAAAGGTTTTGAATGCTAGTTGGATGGAAGATGTTCCAGAGAATCTCAGAGAAGATTACATACTTGAAATGACGAATTCTCTTGTCCAAGAAAGGGAGGGAGTCTCCTGCCTTAATCTTTTGTTACTGTGTACTTCAAAAAAAAAAAAAGTTAAATGTTAA MERKNWRPPRDHILKINTDATIYLQANRCGIGVIVRVVDSEIAEALAVQEGVAMAVDLGFREVEVETDASRVAAFLKKCEFSRTEVGFIIDETLTLVAALTKVSFSWCARDSNGLAHHLARMAAEKVLNASWMEDVPENLREDYILEMTNSLVQEREGVSCLNLLLLCTSKKKKVKC Homology
BLAST of Sed0023448 vs. NCBI nr
Match: XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber]) HSP 1 Score: 88.2 bits (217), Expect = 7.8e-14 Identity = 51/148 (34.46%), Postives = 73/148 (49.32%), Query Frame = 0
BLAST of Sed0023448 vs. NCBI nr
Match: TXG57364.1 (hypothetical protein EZV62_018677 [Acer yangbiense]) HSP 1 Score: 87.0 bits (214), Expect = 1.7e-13 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of Sed0023448 vs. NCBI nr
Match: XP_023880912.1 (uncharacterized protein LOC111993298 [Quercus suber]) HSP 1 Score: 83.2 bits (204), Expect = 2.5e-12 Identity = 53/164 (32.32%), Postives = 75/164 (45.73%), Query Frame = 0
BLAST of Sed0023448 vs. NCBI nr
Match: XP_023872391.1 (uncharacterized protein LOC111985003 [Quercus suber]) HSP 1 Score: 82.8 bits (203), Expect = 3.3e-12 Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 0
BLAST of Sed0023448 vs. NCBI nr
Match: XP_021744937.1 (uncharacterized protein LOC110710901 [Chenopodium quinoa]) HSP 1 Score: 82.0 bits (201), Expect = 5.6e-12 Identity = 49/151 (32.45%), Postives = 79/151 (52.32%), Query Frame = 0
BLAST of Sed0023448 vs. ExPASy TrEMBL
Match: A0A2N9EK22 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2801 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.7e-14 Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Sed0023448 vs. ExPASy TrEMBL
Match: A0A2N9GYK3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32597 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-14 Identity = 55/156 (35.26%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Sed0023448 vs. ExPASy TrEMBL
Match: A0A5C7HKD5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018677 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 8.4e-14 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of Sed0023448 vs. ExPASy TrEMBL
Match: A0A2N9EQW7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4942 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.1e-13 Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of Sed0023448 vs. ExPASy TrEMBL
Match: A0A2N9G3I8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21623 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13 Identity = 51/158 (32.28%), Postives = 72/158 (45.57%), Query Frame = 0
BLAST of Sed0023448 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.7e-04 Identity = 37/132 (28.03%), Postives = 55/132 (41.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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