Sed0018510 (gene) Chayote v1

Overview


Name	Sed0018510
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Calcium-binding EF-hand family protein
Location	LG02: 46150777 .. 46151917 (-)
RNA-Seq Expression	Sed0018510
Synteny	Sed0018510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTTTCCAAGAAGTTGCATAGGTAGTACAATGAGAGAGTTTTCTCACAAACCATTTAACCCCTTCACCTTCTTCACACAAATTGTCTCAACAAAAAAAATCAAATAATCCCACTTTGTTCATTTTCATAATCTTCTTCTTCTTCACAACAACAACAACACCACCATTCTCCAAATGAAGCTTATCAAAATAACCTCCAAATCCTTCAACCCCAAACGCCTCTTCGGTTCCAAAACCCACCGCTCCAAACTCTCCCGCTCCGACCCGCCCTCCTTCGCCTCCGGTTCCTCCAACGAACCCACCACCCCGACCAGCGTCCTGCCCCGCCCGCCCAACTCCGGCGACTGGTCCGACTTCTCCGACGACGCCTCCCGCAAGGGCCTCGACGCCCTCCTCGCCCTCTTCGGCGCCGACCCGCCCTCCGAGGACGAGCTCAGGCTGGTCCTCGGCGACGGAGCAGCGACCGTGGACACGCTCGTGAACCGGGTCGGACCGGCGCCCTGCGATTCCGAGCTCCGCGACACGTTCGAGATCTTCGACGCCGACCGCGACGGGAGGATCACGGCGGAGGAGCTCTTGAGCGTGTTCACGAGAATGGAGGAGCGGTGCACGTTAGAGGATTGTCGGCGCATGATAGCTGGCGTCGACAAGAATGGGGATGGCTTCGTCTGCTTCGAGGACTTTGCGCGTATGATGGACTGCCCGAGATGAACCAATTGAAGAAACCCTTTCATTTATTTGTATTATTAATAATAATAATATCAGGGTGTCTTTTCTTCAAGGATCGGACGGTCAAGATTGTCTGTCCCTTCTCCGTAGTTGTGGGTGTGTTTGGGAAGTATAGAAAACGGTACTAAGTCTTCGGATCGTACAAAATTGGTCAATTTCTGCCTCGGGGGACTGTTTGGTTCCGGCAAGTTGAGAGGAAAATTAAGTGGAAATTTGAGAATTTAGTGATATAAATGTGGAAAAATTCAGTTTGAATATAGTTATTTCTCAAAGTTGCACAAAAATATTGTTTGAATATGAATATTTGTACAAGAGCAGGACAATTCTGTTTTTATATGGATATTTGTAGAAGAAATTATTGAAGATCTCGTTTGAATCTTATTGTTTTAAATAGAGGTTAAAAATTGTTAT

mRNA sequence

GAAGTTTCCAAGAAGTTGCATAGGTAGTACAATGAGAGAGTTTTCTCACAAACCATTTAACCCCTTCACCTTCTTCACACAAATTGTCTCAACAAAAAAAATCAAATAATCCCACTTTGTTCATTTTCATAATCTTCTTCTTCTTCACAACAACAACAACACCACCATTCTCCAAATGAAGCTTATCAAAATAACCTCCAAATCCTTCAACCCCAAACGCCTCTTCGGTTCCAAAACCCACCGCTCCAAACTCTCCCGCTCCGACCCGCCCTCCTTCGCCTCCGGTTCCTCCAACGAACCCACCACCCCGACCAGCGTCCTGCCCCGCCCGCCCAACTCCGGCGACTGGTCCGACTTCTCCGACGACGCCTCCCGCAAGGGCCTCGACGCCCTCCTCGCCCTCTTCGGCGCCGACCCGCCCTCCGAGGACGAGCTCAGGCTGGTCCTCGGCGACGGAGCAGCGACCGTGGACACGCTCGTGAACCGGGTCGGACCGGCGCCCTGCGATTCCGAGCTCCGCGACACGTTCGAGATCTTCGACGCCGACCGCGACGGGAGGATCACGGCGGAGGAGCTCTTGAGCGTGTTCACGAGAATGGAGGAGCGGTGCACGTTAGAGGATTGTCGGCGCATGATAGCTGGCGTCGACAAGAATGGGGATGGCTTCGTCTGCTTCGAGGACTTTGCGCGTATGATGGACTGCCCGAGATGAACCAATTGAAGAAACCCTTTCATTTATTTGTATTATTAATAATAATAATATCAGGGTGTCTTTTCTTCAAGGATCGGACGGTCAAGATTGTCTGTCCCTTCTCCGTAGTTGTGGGTGTGTTTGGGAAGTATAGAAAACGGTACTAAGTCTTCGGATCGTACAAAATTGGTCAATTTCTGCCTCGGGGGACTGTTTGGTTCCGGCAAGTTGAGAGGAAAATTAAGTGGAAATTTGAGAATTTAGTGATATAAATGTGGAAAAATTCAGTTTGAATATAGTTATTTCTCAAAGTTGCACAAAAATATTGTTTGAATATGAATATTTGTACAAGAGCAGGACAATTCTGTTTTTATATGGATATTTGTAGAAGAAATTATTGAAGATCTCGTTTGAATCTTATTGTTTTAAATAGAGGTTAAAAATTGTTAT

Coding sequence (CDS)

ATGAAGCTTATCAAAATAACCTCCAAATCCTTCAACCCCAAACGCCTCTTCGGTTCCAAAACCCACCGCTCCAAACTCTCCCGCTCCGACCCGCCCTCCTTCGCCTCCGGTTCCTCCAACGAACCCACCACCCCGACCAGCGTCCTGCCCCGCCCGCCCAACTCCGGCGACTGGTCCGACTTCTCCGACGACGCCTCCCGCAAGGGCCTCGACGCCCTCCTCGCCCTCTTCGGCGCCGACCCGCCCTCCGAGGACGAGCTCAGGCTGGTCCTCGGCGACGGAGCAGCGACCGTGGACACGCTCGTGAACCGGGTCGGACCGGCGCCCTGCGATTCCGAGCTCCGCGACACGTTCGAGATCTTCGACGCCGACCGCGACGGGAGGATCACGGCGGAGGAGCTCTTGAGCGTGTTCACGAGAATGGAGGAGCGGTGCACGTTAGAGGATTGTCGGCGCATGATAGCTGGCGTCGACAAGAATGGGGATGGCTTCGTCTGCTTCGAGGACTTTGCGCGTATGATGGACTGCCCGAGATGA

Protein sequence

MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDWSDFSDDASRKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSELRDTFEIFDADRDGRITAEELLSVFTRMEERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCPR

Homology

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BLAST of Sed0018510 vs. NCBI nr
Match: XP_038903370.1 (probable calcium-binding protein CML36 [Benincasa hispida])

HSP 1 Score: 221.5 bits (563), Expect = 5.9e-54
Identity = 126/181 (69.61%), Postives = 139/181 (76.80%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPT-TPTSVLPRPPNSGDWS 60
           MKL+    KSFNP RLF SK+HRSKLSRS PPSF S SS+    TPTSVLP    S  WS
Sbjct: 1   MKLL----KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSAGTPTSVLP----SAVWS 60

Query: 61  DFSDDA-SRKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSELRDTF 120
           DFSD   SRK L+ALL L GA+PPSE+EL+ ++G         ++RVGPA C SELRDTF
Sbjct: 61  DFSDSTLSRKELEALLGLIGAEPPSEEELKTMMG--------AMDRVGPA-CHSELRDTF 120

Query: 121 EIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCP 179
           EIFDAD DGRITAEEL SVFT M +E+CTLEDCRRMIAGVDKNGDGFVCFEDFARMMDC 
Sbjct: 121 EIFDADHDGRITAEELFSVFTAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCQ 164

[Close]

BLAST of Sed0018510 vs. NCBI nr
Match: KAG6580931.1 (putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017674.1 putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-53
Identity = 118/181 (65.19%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDWSD 60
           MKL KIT+KSF+P RLF SK HR+ LS+S+PPSF S SS+ PT+     P P  SG+WSD
Sbjct: 1   MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 60

Query: 61  FSDDAS--RKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSELRDTF 120
           FSD  +  RK L+ALL L GA+PPSE+EL++++          V++VGP PC SELRDTF
Sbjct: 61  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQ--------VDKVGP-PCHSELRDTF 120

Query: 121 EIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCP 179
           EIFDAD DGRITAEEL SVF+ M +E+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+C 
Sbjct: 121 EIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQ 172

[Close]

BLAST of Sed0018510 vs. NCBI nr
Match: XP_022155928.1 (probable calcium-binding protein CML35 [Momordica charantia])

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-53
Identity = 125/190 (65.79%), Postives = 143/190 (75.26%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDW-S 60
           MKLI    K+F+PKRLFGSK  RSK++RSDPPSFAS SS+   TPTSVLPR  ++ DW S
Sbjct: 1   MKLI----KNFSPKRLFGSKKERSKVTRSDPPSFASSSSSSAATPTSVLPRALSADDWPS 60

Query: 61  DFSDD------ASRKGLDALLALFGADPPSEDELRLVL------GDGAATVDTLVNRVGP 120
           DFS D       SRK L+ALL L GADPPS +E+  +L      GDG  +V+ L++ VG 
Sbjct: 61  DFSSDMARHSRVSRKQLEALLGLSGADPPSHEEVAAMLSELDRHGDGVVSVEALMSHVGG 120

Query: 121 APCDSELRDTFEIFDADRDGRITAEELLSVFTRM--EERCTLEDCRRMIAGVDKNGDGFV 176
           A CD +LR+TFEIFDAD DGRITAEEL SVF  +  EERCTLEDCRRMIAGVDKNGDGFV
Sbjct: 121 A-CDEDLRETFEIFDADGDGRITAEELFSVFVAIGEEERCTLEDCRRMIAGVDKNGDGFV 180

[Close]

BLAST of Sed0018510 vs. NCBI nr
Match: XP_022935658.1 (probable calcium-binding protein CML36 [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-53
Identity = 117/181 (64.64%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDWSD 60
           MKL K+T+KSF+P RLF SK HR+ LS+S+PPSF S SS+ PT+     P P  SG+WSD
Sbjct: 13  MKLPKLTAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDDAS--RKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSELRDTF 120
           FSD  +  RK L+ALL L GA+PPSE+EL++++          V++VGP PC SELRDTF
Sbjct: 73  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQ--------VDKVGP-PCHSELRDTF 132

Query: 121 EIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCP 179
           EIFDAD DGRITAEEL SVF+ M +E+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+C 
Sbjct: 133 EIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQ 184

[Close]

BLAST of Sed0018510 vs. NCBI nr
Match: XP_008443339.2 (PREDICTED: probable calcium-binding protein CML35 [Cucumis melo] >KAA0053814.1 putative calcium-binding protein CML35 [Cucumis melo var. makuwa] >TYK25587.1 putative calcium-binding protein CML35 [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 3.8e-53
Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPT-----TPTSVLPRPPNS 60
           MKL+    KSFNP RLF SK+HRSKLSRS PPSF S SS+  +     TPTSVLP    S
Sbjct: 1   MKLL----KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLP----S 60

Query: 61  GDWSDFSDDA-SRKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSEL 120
            DW+DFSD   SRK L ALL L GA+PPSE+E+++++G+        ++RVGPA C SEL
Sbjct: 61  LDWADFSDPTLSRKELKALLGLIGAEPPSEEEIKIMMGE--------MDRVGPA-CHSEL 120

Query: 121 RDTFEIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARM 179
           RDTFEIFDAD DGRITAEEL SVFT M +E CTLEDCRRMIAGVDKNGDGFVCF+DFARM
Sbjct: 121 RDTFEIFDADHDGRITAEELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARM 168

[Close]

BLAST of Sed0018510 vs. ExPASy Swiss-Prot
Match: Q9SS31 (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-30
Identity = 88/215 (40.93%), Postives = 124/215 (57.67%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPT----------------T 60
           MKL K+      PKR F     RS +S+S P +F+ GS++  +                T
Sbjct: 1   MKLAKLI-----PKRFFIRSKDRSTVSKS-PTAFSFGSASSSSGQDCKNSGGDGGGGSVT 60

Query: 61  PTSVLPRPPNSGDW-----------SDFSDDASRKGLDALLALFGADPPSEDELRLVL-- 120
           PTS+LP  P+   +            D     SR  L++LL+  G DP +E+E+ ++L  
Sbjct: 61  PTSILPEVPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKE 120

Query: 121 ----GDGAATVDTLVNRV---GPAPCDSELRDTFEIFDADRDGRITAEELLSVFTRM-EE 179
               GDG   ++ L +RV    PA   +EL++TFE FDADRDG I+A+ELL VF+ + +E
Sbjct: 121 VDCDGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDE 180

[Close]

BLAST of Sed0018510 vs. ExPASy Swiss-Prot
Match: P30188 (Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.6e-28
Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 0


Query: 12  NPKRLFGSKTHRSKLSRSDPPSFASGSSNE------------PT-TPTSVLPRPPNSGDW 71
           +PKRLF +K+ ++ +SRS+P SF+S +S+             PT TP SVLP+  NSGD+
Sbjct: 11  SPKRLFRTKS-KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISVLPQ--NSGDF 70

Query: 72  ----------SDFSDD--ASRKGLDALLALFGADPPSEDELRLVL-----GDGAA-TVDT 131
                      D  DD   SR  L AL++    +PPS++E+ L+L     GDG   +++ 
Sbjct: 71  YTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLED 130

Query: 132 LVNRVGPAPCD-----SELRDTFEIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMI 175
           L +RV     +      ELR+ FEIFD DR+G+I+AEEL  VF  + +ERCTLE+C RMI
Sbjct: 131 LASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMI 190

[Close]

BLAST of Sed0018510 vs. ExPASy Swiss-Prot
Match: Q5ZCK5 (Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 GN=CML16 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0


Query: 106 GPAPCDSELRDTFEIFDADRDGRITAEELLSVFTRMEERCTLEDCRRMIAGVDKNGDGFV 165
           G A  ++ELR  F+++D D DGRITA EL  V  R+ E C+ E+C RMIA VD +GDG V
Sbjct: 97  GDAEHEAELRAAFDVYDVDGDGRITAAELGKVLGRIGEGCSAEECERMIASVDVDGDGCV 156

Query: 166 CFEDFARMM 175
            FE+F +MM
Sbjct: 157 GFEEFKKMM 165

[Close]

BLAST of Sed0018510 vs. ExPASy Swiss-Prot
Match: Q8RZB5 (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 GN=CML10 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-13
Identity = 61/172 (35.47%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 14  KRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDWSDFSDDASRKGLDAL 73
           +R  GSK+    L ++DP   ASG  +   TP   + R     D ++     SR  L AL
Sbjct: 11  RRRSGSKS--PPLPQADP---ASGGGSPAPTPEEEMERVFRKFD-ANGDGRISRSELGAL 70

Query: 74  LALFGADPPSEDELRLVL------GDGAATVDTLVNRVGPAPCDS-----ELRDTFEIFD 133
               G    ++DEL  ++      GDG  ++D        A  D+     +LR  F +FD
Sbjct: 71  FESLG-HAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFD 130

Query: 134 ADRDGRITAEELLSVFTRMEERCTLEDCRRMIAGVDKNGDGFVCFEDFARMM 175
           AD +G I+A EL  V   + E+ T++ CRRMI GVD+NGDG + FE+F  MM
Sbjct: 131 ADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175

[Close]

BLAST of Sed0018510 vs. ExPASy Swiss-Prot
Match: Q9FYK2 (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.0e-13
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 66  SRKGLDALLALFGADPPSEDELRLVL-----GDGAATVDTLV--NRVGPAPCD--SELRD 125
           S K L A++   G + P E+  + +      GDG    +  V  N  G    D    L+D
Sbjct: 54  SSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKD 113

Query: 126 TFEIFDADRDGRITAEELLSVFTRMEERCTLEDCRRMIAGVDKNGDGFVCFEDFARMM 175
            F ++D D +G I+AEEL  V   + + C++ +CR+MI GVDK+GDG + FE+F  MM
Sbjct: 114 AFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171

[Close]

BLAST of Sed0018510 vs. ExPASy TrEMBL
Match: A0A6J1DP84 (probable calcium-binding protein CML35 OS=Momordica charantia OX=3673 GN=LOC111022928 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 8.3e-54
Identity = 125/190 (65.79%), Postives = 143/190 (75.26%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDW-S 60
           MKLI    K+F+PKRLFGSK  RSK++RSDPPSFAS SS+   TPTSVLPR  ++ DW S
Sbjct: 1   MKLI----KNFSPKRLFGSKKERSKVTRSDPPSFASSSSSSAATPTSVLPRALSADDWPS 60

Query: 61  DFSDD------ASRKGLDALLALFGADPPSEDELRLVL------GDGAATVDTLVNRVGP 120
           DFS D       SRK L+ALL L GADPPS +E+  +L      GDG  +V+ L++ VG 
Sbjct: 61  DFSSDMARHSRVSRKQLEALLGLSGADPPSHEEVAAMLSELDRHGDGVVSVEALMSHVGG 120

Query: 121 APCDSELRDTFEIFDADRDGRITAEELLSVFTRM--EERCTLEDCRRMIAGVDKNGDGFV 176
           A CD +LR+TFEIFDAD DGRITAEEL SVF  +  EERCTLEDCRRMIAGVDKNGDGFV
Sbjct: 121 A-CDEDLRETFEIFDADGDGRITAEELFSVFVAIGEEERCTLEDCRRMIAGVDKNGDGFV 180

[Close]

BLAST of Sed0018510 vs. ExPASy TrEMBL
Match: A0A6J1FB49 (probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC111442449 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 117/181 (64.64%), Postives = 140/181 (77.35%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDWSD 60
           MKL K+T+KSF+P RLF SK HR+ LS+S+PPSF S SS+ PT+     P P  SG+WSD
Sbjct: 13  MKLPKLTAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASSSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDDAS--RKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSELRDTF 120
           FSD  +  RK L+ALL L GA+PPSE+EL++++          V++VGP PC SELRDTF
Sbjct: 73  FSDTHTDYRKELEALLGLIGAEPPSEEELKMMMSQ--------VDKVGP-PCHSELRDTF 132

Query: 121 EIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCP 179
           EIFDAD DGRITAEEL SVF+ M +E+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+C 
Sbjct: 133 EIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQ 184

[Close]

BLAST of Sed0018510 vs. ExPASy TrEMBL
Match: A0A5A7UEZ0 (Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007460 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53
Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPT-----TPTSVLPRPPNS 60
           MKL+    KSFNP RLF SK+HRSKLSRS PPSF S SS+  +     TPTSVLP    S
Sbjct: 1   MKLL----KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLP----S 60

Query: 61  GDWSDFSDDA-SRKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSEL 120
            DW+DFSD   SRK L ALL L GA+PPSE+E+++++G+        ++RVGPA C SEL
Sbjct: 61  LDWADFSDPTLSRKELKALLGLIGAEPPSEEEIKIMMGE--------MDRVGPA-CHSEL 120

Query: 121 RDTFEIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARM 179
           RDTFEIFDAD DGRITAEEL SVFT M +E CTLEDCRRMIAGVDKNGDGFVCF+DFARM
Sbjct: 121 RDTFEIFDADHDGRITAEELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARM 168

[Close]

BLAST of Sed0018510 vs. ExPASy TrEMBL
Match: A0A1S3B7R8 (probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53
Identity = 124/185 (67.03%), Postives = 141/185 (76.22%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPT-----TPTSVLPRPPNS 60
           MKL+    KSFNP RLF SK+HRSKLSRS PPSF S SS+  +     TPTSVLP    S
Sbjct: 1   MKLL----KSFNPNRLFSSKSHRSKLSRSQPPSFGSASSSSSSTSSAGTPTSVLP----S 60

Query: 61  GDWSDFSDDA-SRKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSEL 120
            DW+DFSD   SRK L ALL L GA+PPSE+E+++++G+        ++RVGPA C SEL
Sbjct: 61  LDWADFSDPTLSRKELKALLGLIGAEPPSEEEIKIMMGE--------MDRVGPA-CHSEL 120

Query: 121 RDTFEIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARM 179
           RDTFEIFDAD DGRITAEEL SVFT M +E CTLEDCRRMIAGVDKNGDGFVCF+DFARM
Sbjct: 121 RDTFEIFDADHDGRITAEELFSVFTAMGDEGCTLEDCRRMIAGVDKNGDGFVCFDDFARM 168

[Close]

BLAST of Sed0018510 vs. ExPASy TrEMBL
Match: A0A6J1J8Y7 (probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC111482360 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 117/181 (64.64%), Postives = 138/181 (76.24%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPTTPTSVLPRPPNSGDWSD 60
           MKL KIT+KSF+P RLF SK HR+ LS+S+PPSF S S + PT+     P P  SG+WSD
Sbjct: 13  MKLPKITAKSFSPGRLFPSKKHRTSLSKSEPPSFGSASFSSPTSVLPPHPHPHLSGEWSD 72

Query: 61  FSDD--ASRKGLDALLALFGADPPSEDELRLVLGDGAATVDTLVNRVGPAPCDSELRDTF 120
           FSD     RK L+ALL L GA+PPSE+EL++++          V++VGPA C SELRDTF
Sbjct: 73  FSDTHIDYRKELEALLGLIGAEPPSEEELKMMMSQ--------VDKVGPA-CHSELRDTF 132

Query: 121 EIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMIAGVDKNGDGFVCFEDFARMMDCP 179
           EIFDAD DGRITAEEL SVF+ M +E+CTLEDCRRMIAGVDKNGDGFVCFEDFA MM+C 
Sbjct: 133 EIFDADHDGRITAEELFSVFSAMGDEQCTLEDCRRMIAGVDKNGDGFVCFEDFAVMMECQ 184

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BLAST of Sed0018510 vs. TAIR 10
Match: AT3G10190.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-31
Identity = 88/215 (40.93%), Postives = 124/215 (57.67%), Query Frame = 0


Query: 1   MKLIKITSKSFNPKRLFGSKTHRSKLSRSDPPSFASGSSNEPT----------------T 60
           MKL K+      PKR F     RS +S+S P +F+ GS++  +                T
Sbjct: 1   MKLAKLI-----PKRFFIRSKDRSTVSKS-PTAFSFGSASSSSGQDCKNSGGDGGGGSVT 60

Query: 61  PTSVLPRPPNSGDW-----------SDFSDDASRKGLDALLALFGADPPSEDELRLVL-- 120
           PTS+LP  P+   +            D     SR  L++LL+  G DP +E+E+ ++L  
Sbjct: 61  PTSILPEVPSPYSYVEILQAFKLIDRDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKE 120

Query: 121 ----GDGAATVDTLVNRV---GPAPCDSELRDTFEIFDADRDGRITAEELLSVFTRM-EE 179
               GDG   ++ L +RV    PA   +EL++TFE FDADRDG I+A+ELL VF+ + +E
Sbjct: 121 VDCDGDGTIRLEELASRVVSLDPARDSTELKETFEFFDADRDGLISADELLRVFSTIGDE 180

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BLAST of Sed0018510 vs. TAIR 10
Match: AT2G41410.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 90/200 (45.00%), Postives = 122/200 (61.00%), Query Frame = 0


Query: 12  NPKRLFGSKTHRSKLSRSDPPSFASGSSNE------------PT-TPTSVLPRPPNSGDW 71
           +PKRLF +K+ ++ +SRS+P SF+S +S+             PT TP SVLP+  NSGD+
Sbjct: 11  SPKRLFRTKS-KASVSRSEPSSFSSNASSSSSDGSYGNLKQGPTATPISVLPQ--NSGDF 70

Query: 72  ----------SDFSDD--ASRKGLDALLALFGADPPSEDELRLVL-----GDGAA-TVDT 131
                      D  DD   SR  L AL++    +PPS++E+ L+L     GDG   +++ 
Sbjct: 71  YTELVQAFKLIDRDDDGVVSRGDLAALISRLSHEPPSQEEVSLMLREVDGGDGGCISLED 130

Query: 132 LVNRVGPAPCD-----SELRDTFEIFDADRDGRITAEELLSVFTRM-EERCTLEDCRRMI 175
           L +RV     +      ELR+ FEIFD DR+G+I+AEEL  VF  + +ERCTLE+C RMI
Sbjct: 131 LASRVAGTSGEGSVETEELREVFEIFDVDRNGKISAEELHRVFGVIGDERCTLEECMRMI 190

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BLAST of Sed0018510 vs. TAIR 10
Match: AT1G24620.1 (EF hand calcium-binding protein family )

HSP 1 Score: 75.1 bits (183), Expect = 6.4e-14
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 66  SRKGLDALLALFGADPPSEDELRLVL-----GDGAATVDTLV--NRVGPAPCD--SELRD 125
           S K L A++   G + P E+  + +      GDG    +  V  N  G    D    L+D
Sbjct: 54  SSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKD 113

Query: 126 TFEIFDADRDGRITAEELLSVFTRMEERCTLEDCRRMIAGVDKNGDGFVCFEDFARMM 175
            F ++D D +G I+AEEL  V   + + C++ +CR+MI GVDK+GDG + FE+F  MM
Sbjct: 114 AFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171

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BLAST of Sed0018510 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 31/62 (50.00%), Postives = 48/62 (77.42%), Query Frame = 0


Query: 113 ELRDTFEIFDADRDGRITAEELLSVFTRMEERCTLEDCRRMIAGVDKNGDGFVCFEDFAR 172
           +L++ F+++D DR+GRI+A EL SV   + E+C+++DC+RMI  VD +GDG V FE+F +
Sbjct: 90  DLKEAFDLYDLDRNGRISANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEEFKK 149

Query: 173 MM 175
           MM
Sbjct: 150 MM 151

[Close]

BLAST of Sed0018510 vs. TAIR 10
Match: AT1G18210.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.4e-13
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 83  SEDELRLVL------GDGAATVDTLVNRVGPAPCDSELRDTFEIFDADRDGRITAEELLS 142
           +E EL  VL       DG   +D        +   +E+RD F+++D D++G I+A EL  
Sbjct: 56  TETELNRVLEEVDTDRDGYINLDEFSTLCRSSSSAAEIRDAFDLYDQDKNGLISASELHQ 115

Query: 143 VFTRMEERCTLEDCRRMIAGVDKNGDGFVCFEDFARMM 175
           V  R+   C++EDC RMI  VD +GDG V FE+F +MM
Sbjct: 116 VLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEEFQKMM 153

The following BLAST results are available for this feature:

BLAST of Sed0018510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903370.1	5.9e-54	69.61	probable calcium-binding protein CML36 [Benincasa hispida]	[more]
KAG6580931.1	1.3e-53	65.19	putative calcium-binding protein CML36, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022155928.1	1.7e-53	65.79	probable calcium-binding protein CML35 [Momordica charantia]	[more]
XP_022935658.1	2.2e-53	64.64	probable calcium-binding protein CML36 [Cucurbita moschata]	[more]
XP_008443339.2	3.8e-53	67.03	PREDICTED: probable calcium-binding protein CML35 [Cucumis melo] >KAA0053814.1 p...	[more]

BLAST of Sed0018510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SS31	3.6e-30	40.93	Probable calcium-binding protein CML36 OS=Arabidopsis thaliana OX=3702 GN=CML36 ...	[more]
P30188	2.6e-28	45.00	Probable calcium-binding protein CML35 OS=Arabidopsis thaliana OX=3702 GN=CML35 ...	[more]
Q5ZCK5	2.4e-13	53.62	Probable calcium-binding protein CML16 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q8RZB5	3.1e-13	35.47	Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FYK2	9.0e-13	36.44	Probable calcium-binding protein CML25 OS=Arabidopsis thaliana OX=3702 GN=CML25 ...	[more]

BLAST of Sed0018510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DP84	8.3e-54	65.79	probable calcium-binding protein CML35 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1FB49	1.1e-53	64.64	probable calcium-binding protein CML36 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A5A7UEZ0	1.9e-53	67.03	Putative calcium-binding protein CML35 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B7R8	1.9e-53	67.03	probable calcium-binding protein CML35 OS=Cucumis melo OX=3656 GN=LOC103486950 P...	[more]
A0A6J1J8Y7	1.6e-52	64.64	probable calcium-binding protein CML36 OS=Cucurbita maxima OX=3661 GN=LOC1114823...	[more]

BLAST of Sed0018510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10190.1	2.6e-31	40.93	Calcium-binding EF-hand family protein	[more]
AT2G41410.1	1.8e-29	45.00	Calcium-binding EF-hand family protein	[more]
AT1G24620.1	6.4e-14	36.44	EF hand calcium-binding protein family	[more]
AT1G66400.1	1.4e-13	50.00	calmodulin like 23	[more]
AT1G18210.1	2.4e-13	39.80	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 113..141 e-value: 1.1E-5 score: 34.9 coord: 149..177 e-value: 0.014 score: 24.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 112..174 e-value: 2.1E-9 score: 37.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 109..144 score: 13.313904
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 145..178 score: 10.691735
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 113..174 e-value: 5.74812E-20 score: 76.8177
None	No IPR available	GENE3D	1.10.238.10		coord: 64..177 e-value: 8.9E-20 score: 73.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..53
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 5..176
None	No IPR available	PANTHER	PTHR10891:SF790	CALCIUM-BINDING PROTEIN CML35-RELATED	coord: 5..176
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 158..170
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 122..134
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 68..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018510.1	Sed0018510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding