Sed0018466 (gene) Chayote v1

Overview


Name	Sed0018466
Type	gene
Organism	Sechium edule (Chayote v1)
Description	serine/arginine-rich splicing factor RS40-like isoform X1
Location	LG08: 40199747 .. 40202916 (-)
RNA-Seq Expression	Sed0018466
Synteny	Sed0018466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAATCCAAATCATCTGCAAATTAAAGAAGGAGGCTTTAAAATGAAACCCTAAATCTAAAAGCGCCCATTTTTCCCACAGCCGCGGCCCTCACTTGCAGCCTCTCCGGCGAATCCACACTGCGTCAATCGACGTCGACGGTGTCCTGAAACTCTCCACGGCGGAAAATAATTCGACATACAATCACCGACTTGTGTGCAGAGGTAAGTGCTTTGGATGGATTTCTCAATATCTTGAAACAACTGTCTTGTTGATGGAGTGAAATTAGGTTTCATGAACTCTGATGTTGCATTTGCTTATTTTTGTTGCGGATCTTAATTGATTTCAGTTCAGGTAGTATGAAGCCGGTGTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAGGTTGATAGAGTAGATATGAAATCTGGTAAGCATATCCATTTTTTATTTTGTTATTTATTATTTTTATTTTTGACGATGAACCTATAGGTTGTCTAATAGATATACAAAAGAGGACGTCTGTGTTTTGTTTCCTGAATTCGTTATGTCGTTGTAAGCCACTTGCTAATCTTTAGCCTATGTAATGTATTGAATTCAATAAGTTTCTCACAATCTACTACCTAAGTATTGGATACGACATTGGCATGGAAACTCAGCTGTTCGAAAATCCCCCGAAGAAGAGGTCGTTCTCATTTCATTTGGTGCCTTGCATACGCTCATCATCCAGCATATGGAAATCAGTGAAGACTACATTTGTTGAGTTTTAATGGGGATTCTTAAAAAAAATTGCGAAAAGAAGAGCGCATTCTTTTAAATCTTAAACCACCTTGGCCAGAATTTTCTTTGGTGCAGGATTTTCTTTGCATATTCATAATCTTCTTGGATAAGGATGGCTCTTCAGAATGAGTTTTCTGCCTGTGACAAGCTTCCTCTTCCTGTTTCCAAGAAGACTCACACTGATCTTCAATGGCACTGCCACCTTACATTTTCCTCCGACACTTTGCATTCCAGTTTCCATCCCACATGACATTTGCCGTCCATTCATACATTATTTCAAGGTTGAAACATAATCAACCTCAGCTGAGGTTGCAGAATAATGGAGAAGGCTCTTTCTATTTGTAGACCTATCATGAGACATCCTGTTTTGGATTATTGCTCCTTCACACCACTTAGTTCATTACACAAGGTCTGTTGCTAAATTCACTGCTAACTTAGTTTAAAGATTTCACGGGGGTTGCAAATATTTCTTTCTTATGGTAAGAATTTGTTTGGTTCGTTAGATACTTCGACAGAGGGAAAATTGATATTGCATTTTGAGGAATTTTTTGGTGTTATATAGATTCCATGATTAGTTTATTCAGTTTTGGATGTTTTATTGGTTTACAGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCAGAGAGAATTTGGCCGAAAGGGTCGCAGACTACGTGTTGAGTGGACCAAAGTAATATACATTGATATGGCAGAACTTCTAATGATCTCTTTCCTTCTCAATCATATTTGGAACTTCCATTTTTATTTATCTTACCTTCAATCAATTATCAATCTTATTTTTCTCTGTAGCAAGAGCGTGGCATTAGAAGACCAGGTGGAGATGGAGGTAGAGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACATTATTTGTTATCAACTTTGACCCATATAATACTAGGACAAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATACTGAGTGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAAAGCATTGGAGGTTACAAACATGAGGTGAATATTCATTTCATCATTGATTTGCATGTTATTTGAGTAAAACGGTTATCACATTGAAGCTCGATTTATCACTGAGACCATCTAATGGAGAAATACATTGATATTTTCACTTGCTATAGGCCATTGGTTACTTTTTTAGTTATTGTTGTGTCGTTTGATAATTATTATTGTGTACAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCATCTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCTGATAGGAACCGAAATAAGTCTCCCGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCACCAAAGGTATTAGCCGCAGTCCATATAGGAGACAAAGAGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCGAGTCCTTATCAGAGGGAGAGGGAGAGGGAGAGGAGTTCTCCTGATTATGGCCGTGGCCGAAGCCCCAATCATAGTTCTTATAGGAGAGAGAGAGAAAGATCAGTTGATCATGTTAGAGCCCCTAGCCATAGTCCACCTCATGAGAGGGAAAGAGAAAATGATGACCGAGTCCCTAGCCGAAGTCGCAGCCCCTATGGGAGAGGAAGAGAGAGTCCTACTGATGGACGTGGCCGTAGCCATAGTCCTCGTGATAGCGAGAGATCAAACCCTGACAATGGTCATAACCAGGAGCTAGATGCTGTAGCAGAGCGTGGAGATAGCCCCAATTATGGTGGCACTCAGAGTCCAAAACATCATGGATATAGCAGGTTCGTACTTGCAAGTTTGCTTTCTTATTATCGTTGATTGTTTCCAAAATATTTGTTTTATGCTTCCCTTTTATTTGGTTGTTGCAGCCGTTCACCTCAAGCTGAGGAATGATTAACATAAAGTGAGAAGTGAAGTGACATTGATCTGAACCGGATTCAGAGTATGTTTAGTTGTATAATCAGTATCAGTGATAAACACGGACTCACTACTGTAAGGATAATGTTTGGGATTTGCAAGTACCTTTATGCTTAAGATTCTAGTGACTCGATGATGCTTATGCTATTGAATAGACCCTGATTCATATTTCTAGTTTTTTGAAATAGTCTTGTTCCATTTTGCTTACCTTGGTTTTTAAAACGCTAGATGTCGACCATATTTTATTTTGGATTGGTTTGGGCTAAGAGAATTTTCCTCCGTAATAAAAAAGCTTAAGAGAGTGACTCAGTGTGCATATGTGGTCACAATTGTTTTTTCATTTTTATTTTTTATATTGTTCA

mRNA sequence

AAAAAAAATCCAAATCATCTGCAAATTAAAGAAGGAGGCTTTAAAATGAAACCCTAAATCTAAAAGCGCCCATTTTTCCCACAGCCGCGGCCCTCACTTGCAGCCTCTCCGGCGAATCCACACTGCGTCAATCGACGTCGACGGTGTCCTGAAACTCTCCACGGCGGAAAATAATTCGACATACAATCACCGACTTGTGTGCAGAGTTCAGGTAGTATGAAGCCGGTGTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAGGTTGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCAGAGAGAATTTGGCCGAAAGGGTCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCAGGTGGAGATGGAGGTAGAGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACATTATTTGTTATCAACTTTGACCCATATAATACTAGGACAAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATACTGAGTGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAAAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCATCTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCTGATAGGAACCGAAATAAGTCTCCCGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCACCAAAGGTATTAGCCGCAGTCCATATAGGAGACAAAGAGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCGAGTCCTTATCAGAGGGAGAGGGAGAGGGAGAGGAGTTCTCCTGATTATGGCCGTGGCCGAAGCCCCAATCATAGTTCTTATAGGAGAGAGAGAGAAAGATCAGTTGATCATGTTAGAGCCCCTAGCCATAGTCCACCTCATGAGAGGGAAAGAGAAAATGATGACCGAGTCCCTAGCCGAAGTCGCAGCCCCTATGGGAGAGGAAGAGAGAGTCCTACTGATGGACGTGGCCGTAGCCATAGTCCTCGTGATAGCGAGAGATCAAACCCTGACAATGGTCATAACCAGGAGCTAGATGCTGTAGCAGAGCGTGGAGATAGCCCCAATTATGGTGGCACTCAGAGTCCAAAACATCATGGATATAGCAGCCGTTCACCTCAAGCTGAGGAATGATTAACATAAAGTGAGAAGTGAAGTGACATTGATCTGAACCGGATTCAGAGTATGTTTAGTTGTATAATCAGTATCAGTGATAAACACGGACTCACTACTGTAAGGATAATGTTTGGGATTTGCAAGTACCTTTATGCTTAAGATTCTAGTGACTCGATGATGCTTATGCTATTGAATAGACCCTGATTCATATTTCTAGTTTTTTGAAATAGTCTTGTTCCATTTTGCTTACCTTGGTTTTTAAAACGCTAGATGTCGACCATATTTTATTTTGGATTGGTTTGGGCTAAGAGAATTTTCCTCCGTAATAAAAAAGCTTAAGAGAGTGACTCAGTGTGCATATGTGGTCACAATTGTTTTTTCATTTTTATTTTTTATATTGTTCA

Coding sequence (CDS)

ATGAAGCCGGTGTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTGGTCGATATGGAAAGGTTGATAGAGTAGATATGAAATCTGGTTTTGCTTTTATCTACATGGAGGATGAGAGAGATGCTGAGGATGCTATCCGTGCACTGGATCAGAGAGAATTTGGCCGAAAGGGTCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCAGGTGGAGATGGAGGTAGAGGAGGTTCGAGGAAATCCTCTACTAATACAAGACCTTCAAAGACATTATTTGTTATCAACTTTGACCCATATAATACTAGGACAAGGGATTTGGAGAGGCACTTCGATCCTTATGGTAAGATACTGAGTGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAATTGCAGGAGGATGCCACTAAAGCATTGGAGGTTACAAACATGAGCAAATTGATGGATCGAGTGATTTCGGTGGAATATGCATCTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCTGATAGGAACCGAAATAAGTCTCCCGATAGAAAACGACGATCCCCAAGTCCCTATAGAAGAGAGCGAGGAAGCCCTGATTATGGCACCAAAGGTATTAGCCGCAGTCCATATAGGAGACAAAGAGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCGAGTCCTTATCAGAGGGAGAGGGAGAGGGAGAGGAGTTCTCCTGATTATGGCCGTGGCCGAAGCCCCAATCATAGTTCTTATAGGAGAGAGAGAGAAAGATCAGTTGATCATGTTAGAGCCCCTAGCCATAGTCCACCTCATGAGAGGGAAAGAGAAAATGATGACCGAGTCCCTAGCCGAAGTCGCAGCCCCTATGGGAGAGGAAGAGAGAGTCCTACTGATGGACGTGGCCGTAGCCATAGTCCTCGTGATAGCGAGAGATCAAACCCTGACAATGGTCATAACCAGGAGCTAGATGCTGTAGCAGAGCGTGGAGATAGCCCCAATTATGGTGGCACTCAGAGTCCAAAACATCATGGATATAGCAGCCGTTCACCTCAAGCTGAGGAATGA

Protein sequence

MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREFGRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRSRSPYGRGRESPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGYSSRSPQAEE

Homology

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BLAST of Sed0018466 vs. NCBI nr
Match: XP_022159582.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia])

HSP 1 Score: 613.2 bits (1580), Expect = 1.4e-171
Identity = 324/367 (88.28%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GRKGRRLRVEWTKQERGIRRPGG GG GGSR+SSTNTRPSKTLFVINFDPY+TRTRDLER
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA RDDDEKRNG
Sbjct: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQR 240
           YSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GI+RSPYRRQRASPDYGSRRSPSPYQR
Sbjct: 181 YSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGITRSPYRRQRASPDYGSRRSPSPYQR 240

Query: 241 ERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHS-PPHERERENDDRVPSRSRSP 300
            R+    SPDYGRGRSPNHS YRRERERS DHVR PSHS PPH+RER NDDRV +RSRSP
Sbjct: 241 NRD----SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPPPHQRERANDDRVHNRSRSP 300

Query: 301 YGRGRESPTDGRGRSHS-PRDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGYSS 360
           YGR R SPTDGRG S+S PRD ERSNPDNGH Q L+ VAE GDSP+YGGTQSP H GY+S
Sbjct: 301 YGRERGSPTDGRGASYSPPRDIERSNPDNGHEQRLNTVAEPGDSPSYGGTQSPTHRGYNS 360

Query: 361 RSPQAEE 366
           RSPQAEE
Sbjct: 361 RSPQAEE 362

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BLAST of Sed0018466 vs. NCBI nr
Match: XP_038904888.1 (serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 609.4 bits (1570), Expect = 2.1e-170
Identity = 323/370 (87.30%), Postives = 340/370 (91.89%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP----GGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTR 120
           GRKGRRLRVEWTKQERGIRRP    GG GG GGSR+SSTNTRPSKTLFVINFDPY+TRTR
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGVGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR 120

Query: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDE 180
           DLERHFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA RDDD+
Sbjct: 121 DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDD 180

Query: 181 KRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPS 240
           KRNGYSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GISRSPYRRQRASPDYGSRRSPS
Sbjct: 181 KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSRRSPS 240

Query: 241 PYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRS 300
           PYQ  RERER SPDYGRGRSPNHS YRRERERS D VRAPSHSPPH+RER NDDRV +RS
Sbjct: 241 PYQ--RERERGSPDYGRGRSPNHSPYRRERERSSDRVRAPSHSPPHQRERPNDDRVHNRS 300

Query: 301 RSPYGRGRESPTDGRGRSHSPRDSER-SNPDNGHNQELDAVAERGDSPNYGGTQSPKHHG 360
            SPYGR R SPTDGRG S+SPRD ER SNPDNGH+Q+ + V E G+SP+YGGTQSPKH G
Sbjct: 301 PSPYGRERGSPTDGRGTSYSPRDRERSSNPDNGHDQQQNTVVEPGESPSYGGTQSPKHRG 360

Query: 361 YSSRSPQAEE 366
           Y SRSPQAEE
Sbjct: 361 YGSRSPQAEE 367

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BLAST of Sed0018466 vs. NCBI nr
Match: XP_011650503.1 (serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus])

HSP 1 Score: 594.0 bits (1530), Expect = 9.0e-166
Identity = 314/369 (85.09%), Postives = 334/369 (90.51%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--GGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP  GG G  GGSR+SSTNTRPSKTLFVINFDPY+TR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKR 180
           ERHFDPYGKIL+VRIRRNFAFVQYELQEDAT+ALEVTNMSKLMDRVISVEYA RDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPY 240
           NGYSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GISRSPYRRQRASPDYGSRRSPSPY
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSRRSPSPY 240

Query: 241 QRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRSRS 300
           Q  RERER SPDY RGRSP HS YRRERERS DH+RAPSHSPPH+RER NDDR+P+RS S
Sbjct: 241 Q--RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300

Query: 301 PYGRGRE--SPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGY 360
           PY R RE  SP  GRGRS+SPRD ER NPDNGH+ + + VAE G+ P+Y GTQSPKH GY
Sbjct: 301 PYRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 SSRSPQAEE 366
           +SRSPQAEE
Sbjct: 361 NSRSPQAEE 366

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BLAST of Sed0018466 vs. NCBI nr
Match: XP_008449100.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo] >XP_016900609.1 PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo] >KAA0065815.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo var. makuwa] >TYJ96553.1 serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 594.0 bits (1530), Expect = 9.0e-166
Identity = 324/381 (85.04%), Postives = 341/381 (89.50%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--------GGDGGRGGSRKSSTNTRPSKTLFVINFDPYN 120
           GRKGRRLRVEWTKQERGIRRP        GG GG GGSR+SSTNTRPSKTLFVINFDPY+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA R
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVR-APSHSPPHERERENDDR 300
           RSPSPYQ  RERER SPDYGRGRSPNHS YRRERERS DHVR APS+ P H+RER NDDR
Sbjct: 241 RSPSPYQ--RERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDR 300

Query: 301 VPSRSRSPYGRGRE--SPTDGRGRSHSPRDSER-SNPDN----GHNQELDAVAERGDSPN 360
           VP+RS SPYGR RE  SPTDGRG S+SPRD ER SNPDN    GH+Q+ + V E G+SPN
Sbjct: 301 VPNRSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPN 360

Query: 361 YGGTQSPKHHGYSSRSPQAEE 366
           YG TQSPKH GYSSRSPQAEE
Sbjct: 361 YGDTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of Sed0018466 vs. NCBI nr
Match: XP_004149583.1 (serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus] >KGN56065.1 hypothetical protein Csa_011545 [Cucumis sativus])

HSP 1 Score: 590.9 bits (1522), Expect = 7.6e-165
Identity = 319/379 (84.17%), Postives = 336/379 (88.65%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--------GGDGGRGGSRKSSTNTRPSKTLFVINFDPYN 120
           GRKGRRLRVEWTKQERGIRRP        GG GG GGSR+SSTNTRPSKTLFVINFDPY+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGPGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA R
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNR++SPDRKRRS SPYRRERGSPDYG  GISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSSSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRV 300
           RSPSPYQ  RERER SPDYGRGRSPNHS YRRERERS DHVR PSH P H+RER NDDRV
Sbjct: 241 RSPSPYQ--RERERGSPDYGRGRSPNHSPYRRERERSSDHVRTPSHRPSHQRERPNDDRV 300

Query: 301 PSRSRSPYGRGRESPT-DGRGRSHSPRDSER-SNPDN----GHNQELDAVAERGDSPNYG 360
           P+RS SPYGRGRE  + DGRG S+SPRD ER SNPDN    GH+Q+   + E G+SPNYG
Sbjct: 301 PNRSPSPYGRGREKGSPDGRGTSYSPRDRERSSNPDNGHDHGHDQQQTTIPEPGESPNYG 360

Query: 361 GTQSPKHHGYSSRSPQAEE 366
           GTQSPK  GY SRSPQAEE
Sbjct: 361 GTQSPKRRGYGSRSPQAEE 376

[Close]

BLAST of Sed0018466 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 9.8e-107
Identity = 222/368 (60.33%), Postives = 270/368 (73.37%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKPVFCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALD+ EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GRKGRRLRVEWTK ERG    G     GGSR+SS++ RPSKTLFVINFD  NTRTRDLE+
Sbjct: 61  GRKGRRLRVEWTKSERG----GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEK 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ +N SKLMD+VISVEYA +DDD + NG
Sbjct: 121 HFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQR 240
           +SP+R R++SP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++
Sbjct: 181 HSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKK 240

Query: 241 ERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRSRSPY 300
            R   R SP+YGR R  N S  RRER  S       S SP ++RER + +  P +     
Sbjct: 241 SR---RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFK----- 300

Query: 301 GRGRESPTDGRGRSHSP---RDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGYS 360
              +ESP +G G   SP   R+  RS+P+NG  +   ++  R     Y G +SP     S
Sbjct: 301 ---KESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRS 350

Query: 361 SRSPQAEE 366
            RSP A+E
Sbjct: 361 PRSPPADE 350

[Close]

BLAST of Sed0018466 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 369.4 bits (947), Expect = 4.7e-101
Identity = 227/376 (60.37%), Postives = 265/376 (70.48%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKPVFCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALD+ E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GR GRRLRVEWTK +R     GG G  GGSR+SS+  RPSKTLFVINFD  NTRTRDLER
Sbjct: 61  GRTGRRLRVEWTKNDR-----GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ TN SKLMD+VISVEYA +DDD + NG
Sbjct: 121 HFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYG-SRRSPSPYQ 240
           YSP+R R++SPDR+RRSPSPYRRERGSPDYG +G S   ++R+R SPDYG  RRSPSPY 
Sbjct: 181 YSPERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPY- 240

Query: 241 RERERERSSPDYGRG-------RSPNHSSYRRERERSVDHVRAPSHS-PPHERERENDDR 300
              +R R SPDY R         SP + +    R RS    R  S S PP+E+ RE    
Sbjct: 241 ---KRARLSPDYKRDDRRRERVASPENGAV---RNRSPRKGRGESRSPPPYEKRRE---- 300

Query: 301 VPSRSRSPYGRGRE--SPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQ 360
             SRS  PY + RE  SP     R    R   +S+P+NG  +    + E      Y G  
Sbjct: 301 --SRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 356

Query: 361 SPKHHGYSSRSPQAEE 366
           SP      SRSP AEE
Sbjct: 361 SPIRES-PSRSPPAEE 356

[Close]

BLAST of Sed0018466 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 3.5e-72
Identity = 159/273 (58.24%), Postives = 191/273 (69.96%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           M+PVF GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDERDAEDAIR LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           G + RRL VEW K ERG  RP GD       K+ +N +P+KTLFVINFDP  T+  D+E+
Sbjct: 61  GYEKRRLSVEWAKGERG--RPRGDA------KAPSNLKPTKTLFVINFDPIRTKEHDIEK 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGK+ +VRIRRNF+FVQ+E QEDATKALE T  SK++DRV+SVEYA +DDDE+   
Sbjct: 121 HFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER--- 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRS------ 240
              DRN  +SP   RRS SP  R R SPDYG +    SP + +R SPDYG  RS      
Sbjct: 181 --DDRNGGRSP---RRSLSPVYRRRPSPDYGRR---PSPGQGRRPSPDYGRARSPEYDRY 240

Query: 241 --PSPYQRERERE--RSSPDYGRGRSPNHSSYR 264
             P+ Y+R R  +  R S DYGR RSP +  YR
Sbjct: 241 KGPAAYERRRSPDYGRRSSDYGRQRSPGYDRYR 254

[Close]

BLAST of Sed0018466 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.6e-64
Identity = 146/286 (51.05%), Postives = 184/286 (64.34%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           M+ V+ GNF+YD R  DLERLF ++G+V RVDMKSG+AF+Y EDERDAEDAIR  D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           G   R+L VEW K  +G R    DG      K+ +N RP+KTLFVINFDP  TR RD+ER
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG------KAVSNQRPTKTLFVINFDPIRTRERDMER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGK+L+VR+RRNFAFVQ+  QEDATKAL+ T+ SKL+D+V+SVEYA R+  E+ + 
Sbjct: 121 HFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDR 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQR 240
           Y        +  R+RRSPSP  R R SPDY            +R SP+Y   + P+PY+R
Sbjct: 181 Y--------AGSRRRRSPSPVYRRRPSPDY-----------TRRRSPEYDRYKGPAPYER 240

Query: 241 ERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERER 287
                R SPDYGR              RS D+ RA + SP ++R R
Sbjct: 241 -----RKSPDYGR--------------RSSDYGRARARSPGYDRSR 242

[Close]

BLAST of Sed0018466 vs. ExPASy Swiss-Prot
Match: Q08170 (Serine/arginine-rich splicing factor 4 OS=Homo sapiens OX=9606 GN=SRSF4 PE=1 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 4.4e-14
Identity = 101/361 (27.98%), Postives = 160/361 (44.32%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           M  V+ G   Y AR+ D+ER F  YGK+  VD+K+G+ F+  +D RDA+DA+  L+ ++ 
Sbjct: 1   MPRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDL 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGG--------RGGSRKSSTNTRPSKTLFVINFDPYN 120
              G R+ VE     RG RR G  G         R G  K    TR    L V N     
Sbjct: 61  --CGERVIVE---HARGPRRDGSYGSGRSGYGYRRSGRDKYGPPTRTEYRLIVENLSS-R 120

Query: 121 TRTRDLERHFDPYGKIL---SVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEY 180
              +DL+ +    G++    + + R+N   +++    D  +ALE  + +++  R I +  
Sbjct: 121 CSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRL-V 180

Query: 181 ASRDDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDY 240
             +    +R  YS  R+ ++S  R R S    R+ R        G S+S + + R+    
Sbjct: 181 EDKPGSRRRRSYSRSRSHSRSRSRSRHS----RKSR-----SRSGSSKSSHSKSRSRSRS 240

Query: 241 GSRRSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHEREREND 300
           GSR       R + R RS  +  R  S   S   R R  S    R+ S     E+ + ND
Sbjct: 241 GSRSRSKSRSRSQSRSRSKKEKSRSPSKEKS---RSRSHSAGKSRSKSKDQAEEKIQNND 300

Query: 301 DRVPSRSRSPYGRGRESPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQ 351
           +    +SRSP     +S +  R +     + +R +   G +QE      R  S + GG++
Sbjct: 301 NVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSR 342

[Close]

BLAST of Sed0018466 vs. ExPASy TrEMBL
Match: A0A6J1E078 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025956 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 6.9e-172
Identity = 324/367 (88.28%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GRKGRRLRVEWTKQERGIRRPGG GG GGSR+SSTNTRPSKTLFVINFDPY+TRTRDLER
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA RDDDEKRNG
Sbjct: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDEKRNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQR 240
           YSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GI+RSPYRRQRASPDYGSRRSPSPYQR
Sbjct: 181 YSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGITRSPYRRQRASPDYGSRRSPSPYQR 240

Query: 241 ERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHS-PPHERERENDDRVPSRSRSP 300
            R+    SPDYGRGRSPNHS YRRERERS DHVR PSHS PPH+RER NDDRV +RSRSP
Sbjct: 241 NRD----SPDYGRGRSPNHSPYRRERERSSDHVRPPSHSPPPHQRERANDDRVHNRSRSP 300

Query: 301 YGRGRESPTDGRGRSHS-PRDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGYSS 360
           YGR R SPTDGRG S+S PRD ERSNPDNGH Q L+ VAE GDSP+YGGTQSP H GY+S
Sbjct: 301 YGRERGSPTDGRGASYSPPRDIERSNPDNGHEQRLNTVAEPGDSPSYGGTQSPTHRGYNS 360

Query: 361 RSPQAEE 366
           RSPQAEE
Sbjct: 361 RSPQAEE 362

[Close]

BLAST of Sed0018466 vs. ExPASy TrEMBL
Match: A0A1S4DXA1 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491067 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.3e-166
Identity = 324/381 (85.04%), Postives = 341/381 (89.50%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--------GGDGGRGGSRKSSTNTRPSKTLFVINFDPYN 120
           GRKGRRLRVEWTKQERGIRRP        GG GG GGSR+SSTNTRPSKTLFVINFDPY+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA R
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVR-APSHSPPHERERENDDR 300
           RSPSPYQ  RERER SPDYGRGRSPNHS YRRERERS DHVR APS+ P H+RER NDDR
Sbjct: 241 RSPSPYQ--RERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDR 300

Query: 301 VPSRSRSPYGRGRE--SPTDGRGRSHSPRDSER-SNPDN----GHNQELDAVAERGDSPN 360
           VP+RS SPYGR RE  SPTDGRG S+SPRD ER SNPDN    GH+Q+ + V E G+SPN
Sbjct: 301 VPNRSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPN 360

Query: 361 YGGTQSPKHHGYSSRSPQAEE 366
           YG TQSPKH GYSSRSPQAEE
Sbjct: 361 YGDTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of Sed0018466 vs. ExPASy TrEMBL
Match: A0A5A7VJB8 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002140 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.3e-166
Identity = 324/381 (85.04%), Postives = 341/381 (89.50%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--------GGDGGRGGSRKSSTNTRPSKTLFVINFDPYN 120
           GRKGRRLRVEWTKQERGIRRP        GG GG GGSR+SSTNTRPSKTLFVINFDPY+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA R
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVR-APSHSPPHERERENDDR 300
           RSPSPYQ  RERER SPDYGRGRSPNHS YRRERERS DHVR APS+ P H+RER NDDR
Sbjct: 241 RSPSPYQ--RERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDR 300

Query: 301 VPSRSRSPYGRGRE--SPTDGRGRSHSPRDSER-SNPDN----GHNQELDAVAERGDSPN 360
           VP+RS SPYGR RE  SPTDGRG S+SPRD ER SNPDN    GH+Q+ + V E G+SPN
Sbjct: 301 VPNRSPSPYGREREKGSPTDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPN 360

Query: 361 YGGTQSPKHHGYSSRSPQAEE 366
           YG TQSPKH GYSSRSPQAEE
Sbjct: 361 YGDTQSPKHRGYSSRSPQAEE 378

[Close]

BLAST of Sed0018466 vs. ExPASy TrEMBL
Match: A0A0A0L2A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063650 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.7e-165
Identity = 319/379 (84.17%), Postives = 336/379 (88.65%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDERDAEDAIRALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--------GGDGGRGGSRKSSTNTRPSKTLFVINFDPYN 120
           GRKGRRLRVEWTKQERGIRRP        GG GG GGSR+SSTNTRPSKTLFVINFDPY+
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGPGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASR 180
           TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDAT+ALE+TNMSKLMDRVISVEYA R
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSR 240
           DDD+KRNGYSPDRNR++SPDRKRRS SPYRRERGSPDYG  GISRSPYRRQRASPDYGSR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSSSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSR 240

Query: 241 RSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRV 300
           RSPSPYQ  RERER SPDYGRGRSPNHS YRRERERS DHVR PSH P H+RER NDDRV
Sbjct: 241 RSPSPYQ--RERERGSPDYGRGRSPNHSPYRRERERSSDHVRTPSHRPSHQRERPNDDRV 300

Query: 301 PSRSRSPYGRGRESPT-DGRGRSHSPRDSER-SNPDN----GHNQELDAVAERGDSPNYG 360
           P+RS SPYGRGRE  + DGRG S+SPRD ER SNPDN    GH+Q+   + E G+SPNYG
Sbjct: 301 PNRSPSPYGRGREKGSPDGRGTSYSPRDRERSSNPDNGHDHGHDQQQTTIPEPGESPNYG 360

Query: 361 GTQSPKHHGYSSRSPQAEE 366
           GTQSPK  GY SRSPQAEE
Sbjct: 361 GTQSPKRRGYGSRSPQAEE 376

[Close]

BLAST of Sed0018466 vs. ExPASy TrEMBL
Match: A0A0A0L7I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.8e-165
Identity = 315/370 (85.14%), Postives = 334/370 (90.27%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKP+FCGNFEYDARQPDLERLF RYGKVDRVDMKSGFAFIYMEDER+AEDAI ALD+REF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP--GGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDL 120
           GRKGRRLRVEWTKQERGIRRP  GG G  GGSR+SSTNTRPSKTLFVINFDPY+TR RDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKR 180
           ERHFDPYGKIL+VRIRRNFAFVQYELQEDAT+ALEVTNMSKLMDRVISVEYA RDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPY 240
           NGYSPDRNR++SPDRKRRSPSPYRRERGSPDYG  GISRSPYRRQRASPDYGSRRSPSPY
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYG-NGISRSPYRRQRASPDYGSRRSPSPY 240

Query: 241 QRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRSRS 300
           Q  RERER SPDY RGRSP HS YRRERERS DH+RAPSHSPPH+RER NDDR+P+RS S
Sbjct: 241 Q--RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPS 300

Query: 301 PYGRGRE--SPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGY 360
           PY R RE  SP  GRGRS+SPRD ER NPDNGH+ + + VAE G+ P+Y GTQSPKH GY
Sbjct: 301 PYRRERERGSPIGGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGY 360

Query: 361 -SSRSPQAEE 366
            SSRSPQAEE
Sbjct: 361 NSSRSPQAEE 367

[Close]

BLAST of Sed0018466 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 388.3 bits (996), Expect = 7.0e-108
Identity = 222/368 (60.33%), Postives = 270/368 (73.37%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKPVFCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALD+ EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GRKGRRLRVEWTK ERG    G     GGSR+SS++ RPSKTLFVINFD  NTRTRDLE+
Sbjct: 61  GRKGRRLRVEWTKSERG----GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEK 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ +N SKLMD+VISVEYA +DDD + NG
Sbjct: 121 HFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQR 240
           +SP+R R++SP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++
Sbjct: 181 HSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKK 240

Query: 241 ERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRSRSPY 300
            R   R SP+YGR R  N S  RRER  S       S SP ++RER + +  P +     
Sbjct: 241 SR---RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFK----- 300

Query: 301 GRGRESPTDGRGRSHSP---RDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGYS 360
              +ESP +G G   SP   R+  RS+P+NG  +   ++  R     Y G +SP     S
Sbjct: 301 ---KESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRS 350

Query: 361 SRSPQAEE 366
            RSP A+E
Sbjct: 361 PRSPPADE 350

[Close]

BLAST of Sed0018466 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 388.3 bits (996), Expect = 7.0e-108
Identity = 222/368 (60.33%), Postives = 270/368 (73.37%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKPVFCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALD+ EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GRKGRRLRVEWTK ERG    G     GGSR+SS++ RPSKTLFVINFD  NTRTRDLE+
Sbjct: 61  GRKGRRLRVEWTKSERG----GDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEK 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ +N SKLMD+VISVEYA +DDD + NG
Sbjct: 121 HFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYGSRRSPSPYQR 240
           +SP+R R++SP+R+RRSPSPY+RERGSPDYG      + YR++R SPDYG RRSPSPY++
Sbjct: 181 HSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKK 240

Query: 241 ERERERSSPDYGRGRSPNHSSYRRERERSVDHVRAPSHSPPHERERENDDRVPSRSRSPY 300
            R   R SP+YGR R  N S  RRER  S       S SP ++RER + +  P +     
Sbjct: 241 SR---RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFK----- 300

Query: 301 GRGRESPTDGRGRSHSP---RDSERSNPDNGHNQELDAVAERGDSPNYGGTQSPKHHGYS 360
              +ESP +G G   SP   R+  RS+P+NG  +   ++  R     Y G +SP     S
Sbjct: 301 ---KESPRNGVGEVESPIERRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRS 350

Query: 361 SRSPQAEE 366
            RSP A+E
Sbjct: 361 PRSPPADE 350

[Close]

BLAST of Sed0018466 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 373.2 bits (957), Expect = 2.3e-103
Identity = 227/376 (60.37%), Postives = 265/376 (70.48%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKPVFCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALD+ E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GR GRRLRVEWTK +R     GG G  GGSR+SS+  RPSKTLFVINFD  NTRTRDLER
Sbjct: 61  GRTGRRLRVEWTKNDR-----GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ TN SKLMD+VISVEYA +DDD + NG
Sbjct: 121 HFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYG-SRRSPSPYQ 240
           YSP+R R++SPDR+RRSPSPYRRERGSPDYG +G S   ++R+R SPDYG  RRSPSPY 
Sbjct: 181 YSPERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPY- 240

Query: 241 RERERERSSPDYGRG-------RSPNHSSYRRERERSVDHVRAPSHS-PPHERERENDDR 300
              +R R SPDY R         SP + +    R RS    R  S S PP+E+ RE    
Sbjct: 241 ---KRARLSPDYKRDDRRRERVASPENGAV---RNRSPRKGRGESRSPPPYEKRRE---- 300

Query: 301 VPSRSRSPYGRGRE--SPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQ 360
             SRS  PY + RE  SP     R    R   +S+P+NG  +    + E      Y G  
Sbjct: 301 --SRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 357

Query: 361 SPKHHGYSSRSPQAEE 366
           SP      SRSP AEE
Sbjct: 361 SPIRESSPSRSPPAEE 357

[Close]

BLAST of Sed0018466 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 369.4 bits (947), Expect = 3.3e-102
Identity = 227/376 (60.37%), Postives = 265/376 (70.48%), Query Frame = 0


Query: 1   MKPVFCGNFEYDARQPDLERLFGRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDQREF 60
           MKPVFCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDERDAEDAIRALD+ E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSSTNTRPSKTLFVINFDPYNTRTRDLER 120
           GR GRRLRVEWTK +R     GG G  GGSR+SS+  RPSKTLFVINFD  NTRTRDLER
Sbjct: 61  GRTGRRLRVEWTKNDR-----GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLER 120

Query: 121 HFDPYGKILSVRIRRNFAFVQYELQEDATKALEVTNMSKLMDRVISVEYASRDDDEKRNG 180
           HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ TN SKLMD+VISVEYA +DDD + NG
Sbjct: 121 HFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNG 180

Query: 181 YSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGISRSPYRRQRASPDYG-SRRSPSPYQ 240
           YSP+R R++SPDR+RRSPSPYRRERGSPDYG +G S   ++R+R SPDYG  RRSPSPY 
Sbjct: 181 YSPERRRDRSPDRRRRSPSPYRRERGSPDYG-RGASPVAHKRERTSPDYGRGRRSPSPY- 240

Query: 241 RERERERSSPDYGRG-------RSPNHSSYRRERERSVDHVRAPSHS-PPHERERENDDR 300
              +R R SPDY R         SP + +    R RS    R  S S PP+E+ RE    
Sbjct: 241 ---KRARLSPDYKRDDRRRERVASPENGAV---RNRSPRKGRGESRSPPPYEKRRE---- 300

Query: 301 VPSRSRSPYGRGRE--SPTDGRGRSHSPRDSERSNPDNGHNQELDAVAERGDSPNYGGTQ 360
             SRS  PY + RE  SP     R    R   +S+P+NG  +    + E      Y G  
Sbjct: 301 --SRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGAD 356

Query: 361 SPKHHGYSSRSPQAEE 366
           SP      SRSP AEE
Sbjct: 361 SPIRES-PSRSPPAEE 356

[Close]

BLAST of Sed0018466 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 324.3 bits (830), Expect = 1.2e-88
Identity = 193/333 (57.96%), Postives = 237/333 (71.17%), Query Frame = 0


Query: 36  GFAFIYMEDERDAEDAIRALDQREFGRKGRRLRVEWTKQERGIRRPGGDGGRGGSRKSST 95
           GFAF+YMEDERDAEDAIRALD+ EFGRKGRRLRVEWTK ERG    G     GGSR+SS+
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERG----GDKRSGGGSRRSSS 62

Query: 96  NTRPSKTLFVINFDPYNTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATKALEVT 155
           + RPSKTLFVINFD  NTRTRDLE+HF+PYGKI++VRIRRNFAF+QYE QEDAT+AL+ +
Sbjct: 63  SMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDAS 122

Query: 156 NMSKLMDRVISVEYASRDDDEKRNGYSPDRNRNKSPDRKRRSPSPYRRERGSPDYGTKGI 215
           N SKLMD+VISVEYA +DDD + NG+SP+R R++SP+R+RRSPSPY+RERGSPDYG    
Sbjct: 123 NNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGAS 182

Query: 216 SRSPYRRQRASPDYGSRRSPSPYQRERERERSSPDYGRGRSPNHSSYRRERERSVDHVRA 275
             + YR++R SPDYG RRSPSPY++ R   R SP+YGR R  N S  RRER  S      
Sbjct: 183 PVAAYRKERTSPDYGRRRSPSPYKKSR---RGSPEYGRDRRGNDSPRRRERVASPTKY-- 242

Query: 276 PSHSPPHERERENDDRVPSRSRSPYGRGRESPTDGRGRSHSP---RDSERSNPDNGHNQE 335
            S SP ++RER + +  P +        +ESP +G G   SP   R+  RS+P+NG  + 
Sbjct: 243 -SRSPNNKRERMSPNHSPFK--------KESPRNGVGEVESPIERRERSRSSPENGQVES 302

Query: 336 LDAVAERGDSPNYGGTQSPKHHGYSSRSPQAEE 366
             ++  R     Y G +SP     S RSP A+E
Sbjct: 303 PGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 317

The following BLAST results are available for this feature:

BLAST of Sed0018466 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159582.1	1.4e-171	88.28	serine/arginine-rich splicing factor RS40-like isoform X1 [Momordica charantia]	[more]
XP_038904888.1	2.1e-170	87.30	serine/arginine-rich splicing factor RS40-like isoform X1 [Benincasa hispida]	[more]
XP_011650503.1	9.0e-166	85.09	serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]	[more]
XP_008449100.1	9.0e-166	85.04	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis me...	[more]
XP_004149583.1	7.6e-165	84.17	serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus] >KGN56065...	[more]

BLAST of Sed0018466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	9.8e-107	60.33	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	4.7e-101	60.37	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	3.5e-72	58.24	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	1.6e-64	51.05	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q08170	4.4e-14	27.98	Serine/arginine-rich splicing factor 4 OS=Homo sapiens OX=9606 GN=SRSF4 PE=1 SV=...	[more]

BLAST of Sed0018466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E078	6.9e-172	88.28	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Momordica charantia...	[more]
A0A1S4DXA1	4.3e-166	85.04	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A5A7VJB8	4.3e-166	85.04	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A0A0L2A0	3.7e-165	84.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063650 PE=4 SV=1	[more]
A0A0A0L7I3	4.8e-165	85.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1	[more]

BLAST of Sed0018466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	7.0e-108	60.33	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	7.0e-108	60.33	arginine/serine-rich splicing factor 35	[more]
AT5G52040.2	2.3e-103	60.37	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	3.3e-102	60.37	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	1.2e-88	57.96	arginine/serine-rich splicing factor 35	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 73..139 e-value: 2.3E-16 score: 70.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 74..136 e-value: 2.5E-13 score: 49.6 coord: 6..33 e-value: 2.1E-4 score: 21.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..45 score: 9.35392
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 72..143 score: 15.613252
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 65..156 e-value: 1.1E-20 score: 75.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..64 e-value: 1.4E-10 score: 43.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..336
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..307
None	No IPR available	PANTHER	PTHR23147:SF182	SUBFAMILY NOT NAMED	coord: 5..182
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 5..182
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 52..148
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018466.1	Sed0018466.1	mRNA
Sed0018466.2	Sed0018466.2	mRNA
Sed0018466.3	Sed0018466.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding