Sed0016329 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGCCTCCACTTCTGGAATTGATGAAGATAAGCTATGGTGGAAGAAGCTATGGTCTCTAAAAATCCCAAATAAAATTTGAATTTTTATGTGGAGAGTATTTCATAACATTCTTCCTACCAATGAGAATCTCTGGCATAAGAAAATTGTGAAAGAAAAGCAATGTTCCTTATACACTTACAAATGTGAATCTATTGCGCACTCTCTCTTTGGGTGCAAACGAGCGCGTGAGATTTGGGAATGGAAAAATATCAACCCGAACACAAACGGTCTCCAAAATTTGCAAGCGAAAGATTTCCTGCTTCGAATAGGGCAACTGTTGGGGGGTGAAGATCTATAAATTTTATGTATAACCTGTTGGGCCATATGGGCAGATCGTAATATAGCCATAAGAGGATCACCTTTCGCCCTAATTCAAGAAAGGATAAATTGGATCGAGCGGTACCATGTTGAAACAAGAGGAAAAGAAAATTTGAAATCTCCGTCTTCTCCCCCTCTTGTGGCTCCGATATGGAAGCCAAATCCGATGGCACTCTTTACTCTAAATACATATGCAAGCTACAGCTCGAGCTTAGATCGAACTGGTTTAAGCTGCATTTTTCAAAACAACAGCGGATCCTTTGTGGCATGTGGGGTTAAATGTGTGCCATCGCCTTTGGCTCCGCTTCAAGCAAAGGCTTTGAGTCTTTTCCGAGGGGCTGTGTTTGTTCGTCAACACTCGTTCTCCCCAACGTGGGTCGGGTCGGATTTCCAAATGTTGGTTAAGGAAGTCAACTCAGGAAACCATGCCTTTTCTCCTGTTGAAATCATTGAAGACCTATGCGATGTTCTAAAGGACTCAAGCATCACAGGATTAGGAAAAGTTCTTAGAGTAGTAAACAAAGTAGCTCATATTCTAGCTTCTTATGCATTAGGCGTTGTTGGAGCTCATGTGTGGTTCCACAACCCTCCCAACTGGTTAGTTTCAAGTCTTTGTTCTGCTTTATCAACTTGTAGCCCATTGGGAACCATTTCAAATTAA ATGGGGAAGCCTCCACTTCTGGAATTGATGAAGATAAGCTATGGTGGAAGAAGCTATGATCGTAATATAGCCATAAGAGGATCACCTTTCGCCCTAATTCAAGAAAGGATAAATTGGATCGAGCGGTACCATGTTGAAACAAGAGGAAAAGAAAATTTGAAATCTCCGTCTTCTCCCCCTCTTGTGGCTCCGATATGGAAGCCAAATCCGATGGCACTCTTTACTCTAAATACATATGCAAGCTACAGCTCGAGCTTAGATCGAACTGGTTTAAGCTGCATTTTTCAAAACAACAGCGGATCCTTTGTGGCATGTGGGGTTAAATGTGTGCCATCGCCTTTGGCTCCGCTTCAAGCAAAGGCTTTGAGTCTTTTCCGAGGGGCTGTGTTTGTTCGTCAACACTCGTTCTCCCCAACGTGGGTCGGGTCGGATTTCCAAATGTTGGTTAAGGAAGTCAACTCAGGAAACCATGCCTTTTCTCCTGTTGAAATCATTGAAGACCTATGCGATGTTCTAAAGGACTCAAGCATCACAGGATTAGGAAAAGTTCTTAGAGTAGTAAACAAAGTAGCTCATATTCTAGCTTCTTATGCATTAGGCGTTGTTGGAGCTCATGTGTGGTTCCACAACCCTCCCAACTGGTTAGTTTCAAGTCTTTGTTCTGCTTTATCAACTTGTAGCCCATTGGGAACCATTTCAAATTAA ATGGGGAAGCCTCCACTTCTGGAATTGATGAAGATAAGCTATGGTGGAAGAAGCTATGATCGTAATATAGCCATAAGAGGATCACCTTTCGCCCTAATTCAAGAAAGGATAAATTGGATCGAGCGGTACCATGTTGAAACAAGAGGAAAAGAAAATTTGAAATCTCCGTCTTCTCCCCCTCTTGTGGCTCCGATATGGAAGCCAAATCCGATGGCACTCTTTACTCTAAATACATATGCAAGCTACAGCTCGAGCTTAGATCGAACTGGTTTAAGCTGCATTTTTCAAAACAACAGCGGATCCTTTGTGGCATGTGGGGTTAAATGTGTGCCATCGCCTTTGGCTCCGCTTCAAGCAAAGGCTTTGAGTCTTTTCCGAGGGGCTGTGTTTGTTCGTCAACACTCGTTCTCCCCAACGTGGGTCGGGTCGGATTTCCAAATGTTGGTTAAGGAAGTCAACTCAGGAAACCATGCCTTTTCTCCTGTTGAAATCATTGAAGACCTATGCGATGTTCTAAAGGACTCAAGCATCACAGGATTAGGAAAAGTTCTTAGAGTAGTAAACAAAGTAGCTCATATTCTAGCTTCTTATGCATTAGGCGTTGTTGGAGCTCATGTGTGGTTCCACAACCCTCCCAACTGGTTAGTTTCAAGTCTTTGTTCTGCTTTATCAACTTGTAGCCCATTGGGAACCATTTCAAATTAA MGKPPLLELMKISYGGRSYDRNIAIRGSPFALIQERINWIERYHVETRGKENLKSPSSPPLVAPIWKPNPMALFTLNTYASYSSSLDRTGLSCIFQNNSGSFVACGVKCVPSPLAPLQAKALSLFRGAVFVRQHSFSPTWVGSDFQMLVKEVNSGNHAFSPVEIIEDLCDVLKDSSITGLGKVLRVVNKVAHILASYALGVVGAHVWFHNPPNWLVSSLCSALSTCSPLGTISN Homology
BLAST of Sed0016329 vs. NCBI nr
Match: XP_024195724.1 (uncharacterized protein LOC112198858 [Rosa chinensis]) HSP 1 Score: 73.9 bits (180), Expect = 2.0e-09 Identity = 46/166 (27.71%), Postives = 84/166 (50.60%), Query Frame = 0
BLAST of Sed0016329 vs. NCBI nr
Match: TXG47194.1 (hypothetical protein EZV62_026488 [Acer yangbiense]) HSP 1 Score: 68.9 bits (167), Expect = 6.4e-08 Identity = 50/183 (27.32%), Postives = 83/183 (45.36%), Query Frame = 0
BLAST of Sed0016329 vs. NCBI nr
Match: XP_019175768.1 (PREDICTED: uncharacterized protein LOC109171094 [Ipomoea nil]) HSP 1 Score: 68.6 bits (166), Expect = 8.4e-08 Identity = 43/158 (27.22%), Postives = 72/158 (45.57%), Query Frame = 0
BLAST of Sed0016329 vs. NCBI nr
Match: XP_023897447.1 (uncharacterized protein LOC112009345 [Quercus suber]) HSP 1 Score: 68.6 bits (166), Expect = 8.4e-08 Identity = 47/197 (23.86%), Postives = 90/197 (45.69%), Query Frame = 0
BLAST of Sed0016329 vs. NCBI nr
Match: XP_023905503.1 (uncharacterized protein LOC112017269 [Quercus suber]) HSP 1 Score: 68.6 bits (166), Expect = 8.4e-08 Identity = 49/187 (26.20%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of Sed0016329 vs. ExPASy TrEMBL
Match: A0A5B7BZL4 (RNase H domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_041954 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09 Identity = 49/157 (31.21%), Postives = 72/157 (45.86%), Query Frame = 0
BLAST of Sed0016329 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.1e-08 Identity = 50/183 (27.32%), Postives = 83/183 (45.36%), Query Frame = 0
BLAST of Sed0016329 vs. ExPASy TrEMBL
Match: A0A803QQL5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.3e-08 Identity = 48/169 (28.40%), Postives = 80/169 (47.34%), Query Frame = 0
BLAST of Sed0016329 vs. ExPASy TrEMBL
Match: A0A5C7ICQ3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007481 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 55/206 (26.70%), Postives = 92/206 (44.66%), Query Frame = 0
BLAST of Sed0016329 vs. ExPASy TrEMBL
Match: A0A2H9ZZA9 (Ribonuclease H protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash020470 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.4e-07 Identity = 54/216 (25.00%), Postives = 90/216 (41.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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