Sed0014601 (gene) Chayote v1

Overview


Name	Sed0014601
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG08: 9885314 .. 9889031 (+)
RNA-Seq Expression	Sed0014601
Synteny	Sed0014601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTAAGAGGGCATCCAAAAATGTCTTTCAGATGGTCATCTTAAGACGCCCGACATCTCAAAATTCCCAGGATAATTATGATTACTGCTAAATAAACGTGGTAATACAGAAGCCCCCTCTCATGGGAATCCTCGATTACCACGAAGTGAACGACCCAAGAAAACAACCCCTAAAGTTCTCGAATAAATGAGGACTCGTTTGATAACGTTCGTTTCTTGTTTCCTATTTCTTTTTTTAGAGCAAGAAACAAAAATGTGTTTTATAACTATTTTTATTTCTTGTTTCTTAAAAAAAAAACTAAGAATAGAAATGATACTTGTTTGATAACTATTTCTTATTTCTTGTTTTTTATTTTTTATTTTTAAAAAAATTGATTTAAATAATATTAAAAATGTATAAAAATATATAAAATTTAATGATAAAATATTTATATTATCTAAAACAAATAAATTTATATTCAATCACATGAATAAATTTGTTATGCAATGTCATCTTACACCAGTAATTCAATTAAAATAATGTCGAATAAAATCTAACTCAATTATATAGTATAGTCATTCGTCTAAGATAACTTTTCGTAGTGCAAAATTTCGACGAGTTTTAAATACTATATACCGATGGTAAATTTTAAAAGTCATTAATGAGAATAAAAATTGAAAATATAGATATAGAAATTTTAATTTAAGACTATAAATATACTGATGGTAAAATTAAAAATAAAATAACATACTTTAAAATTTTGTTAAAAAAAAATTATATAAAAGTATTCATAACAATCAGGATTTGAACCATGCCCAACAGCAAAACAAGATGCAAAAATACCATTGATCAATGAACTAATTTAAGACTTAGTATGAGCAAGTTTATAAATAAAGGCAATGCTTTTGAATTTGGCAACAAAAACTACTAAAAGTAACCTAATTAAGAAAGGTTTATTTTTTTTTATGGAAACGAGAAATGAGAACAGTTATCCAATAAAGTTGTTTCTTAAAAATGAAAAATATTAACAAAAAAACAGAAAACGGGAAGGTTATCCAATAAACCATGAGAGTTTAATACCGATTTTCAAAATCAAATATGTGACAATAATATGAAATTGAATTATATAATTTTGGTTAAGGAGTTGAAGTAGAAACTTAATAAAATTGAAAAGAAGAGAAAGAAATGTAATTATTTTAGTTTTTAGAAAAATAGAAAGAACGGTGAATGGGTCAAATTGGGAAGTGCGTGGAGGCCGCCATTTTTGTTGGTGAAAGGCATCGCTCCTTCTCTCTTTCGTGATCCAAATCTTCACCAAACTGCTCTTGTTGTCCCTCCCTCCCTCCCTCTTCCCCAGGCTCCTACTTCAGCGCCGGTACGTTTCTCTCTAAGATTCCTCTTCAATTTCTTATCGTCGATCTGTATTACTGTTTCTGCATCTGCCGTGTATGAATCCATCTCTCCGATTTGATCTCCGCATCGGCGATTCCCATTCATTCCGATCCTTTTCGATTGCTTCCTCGTGCTTTTCTTTGTTTAAATCGGACGAGGAATTGATTGTCTCCTTTGCTTGGGGGAGACGAGGAATGTAGTTTGTCTCAAGAATTGGGGACACTGAATGAATGAACTATTCATTGCTAGTCTTTTCTGTTGAATTTATCGAGTTTTTTTAGCATATTTGGTTGCTGTTATGTTTATATTTGCCACACGAACGTGTTTGGGATTTGTCATTTTTTATACCTAAATTACATTCTTAGTCTGTATGTTTCTGTCCCTTTTTCTCTTTTATTTGTCTACGCTTATTGAATAGTCTTAGGCCAACATTCATAATTTTCCAACCAAAATGCTACACTTGTGGGGGACCTCGTACCCGTAACCTCTTGCTTATCTGGTCATTCTTTATCATGATAGTTCTGCTCCGCTCTTAATTGTCAACTAAAATGGTACTTTAAGTTTCAATATTCCTAGTTTTCAACTAATATGACCTTGTAGACGCTTACGACATTTGGAAGGTATGTTACATTGCATTTTTTTTGTTTGTTTATTAATAATCATGCTTTCATTGAGGTAAGGATGAAATAACATACAAGGAGTGTTCAAAAGAATGCATACACAAATAATAAAGTAAAATAGTGTCTTTAGAATAGAAAAATTACAGAAATTCCTCGAAACAAAGGCCAAAAGTACAAAATTTTACAAATAAACATGTACAAATGGACCAAATTGATAGATGGGTAGGTGTGGTTACCCTGAGTATAATGAAGCGAAGTTCCACTTTCCCGGTTTCCAAAAAGAAAAAAATTGATGTATGGGTGACAATATAGGGAGTAAAATGTAATCTAGCTCTGTTTTTCTCTTGAATAGTTGAGTATCTCTAAATTCCTTTCCATTCAATTGGATGTCGCTTGCATGGCTGGGCTAAAAGCTATACATCACTATTCTTGTTTATATTCTGGGTACTTTTTGGGGTAAGAGCTGTGACCTTTTCATTATTGTCAGTGATGATGGAATCTTCAACTTTACTTTTGTGTAGCAGATATGTATCCATTTTAAGGACACTTGCTGAATTTCGTCTGAGCTGTTTGATTTTTTCCAGATTGTATTCCTGGGATGAATAATTGTTATTAGTTAGTTTTTCACATACGTTAGTCTATTGTGGATAAAATTTTATTTTTTCCTCACAGTTGATTTTCTTAAGCAATATGAGCATTTCATTGCAGAATCCTCTACATTTAGGTACCGAACCTGGGCTTTTCTTTCAGCTGTTGCCTTTGAGAGAAGGATGTCATCTGGTGGTGAAGATACCCATTGGTGCTATCAGTGCAACCATTCATTCTGGCTTAATGGAGACGAAGACATAGCTTGCCCTTATTGTAATGGTGGTTTCATTGAAGAACTTAACGATGTGCATGATGAAACGGTTCAAAACGACCTTAATCCAGGCACAGACGATGATCTTTCTACCCAGGTGCCACCTATTTTCGAAGCCATGTTTTCGTTGATGGGTCGAAGAAACCCGTATCCAAGATTCGGACTTCTTGAAGCTCTTGATACTTTTACCAGAGAACGAATGGCCGGAAGAAACCCGAACTTCGATGTTAGGAGGAGATCCAGTTCTATCCCAGAGCAGAATTTGGATTTTTTCAATTCTTTTTGGTCATTCCATGGACACGCTCCTGGTTCGACCTTCTCTAGTGTTTCTCCAGAAGGTAGATCTAGTCAGCATGCGGCACTGGAAGCACTAGCTGCACTTTCCTTCAACGAACAAAGAGATCCAGCTCCAGCTCCGGCTTCCCGCTCGTCTATAGAAGCAATGCCTACGATCAAGATCAACCAAATGCACCTTGGCACTGACTCTCATTGTCCTGTCTGTAAAGAAAAATTTGAGCTGGGATCTGAAGCCAAAGAGATGCCATGTAATCATATTTATCACACTGATTGCATCCTTCCTTGGCTGGCCCAGCACAACACTTGCCCGGTTTGTCGACACGAGCTGCCTCAGCAGGATGGAAGACACGGTTGGGGAGGGGACAGCAGCAGCAACAACAACAGTAGTGAAGTCTCAAATGAGAGGGGGGTTTTTCTGAGTAGGTATGCGTTCCCAGAGCATTCTGCTCCTCGAAATGTAGTTACTCGTTTCAGCAGTGGGATTCGTAGAAATGGCAGCCCACCTACAAATCGCGAGCAAGATAACGAACCGAGTTATCCTGAATGGCCTCCTCCTTTCAATTTCTAA

mRNA sequence

ATGTTAAAGAACGGTGAATGGGTCAAATTGGGAAGTGCGTGGAGGCCGCCATTTTTGTTGGTGAAAGGCATCGCTCCTTCTCTCTTTCGTGATCCAAATCTTCACCAAACTGCTCTTGTTGTCCCTCCCTCCCTCCCTCTTCCCCAGGCTCCTACTTCAGCGCCGGTACCTGTTGCCTTTGAGAGAAGGATGTCATCTGGTGGTGAAGATACCCATTGGTGCTATCAGTGCAACCATTCATTCTGGCTTAATGGAGACGAAGACATAGCTTGCCCTTATTGTAATGGTGGTTTCATTGAAGAACTTAACGATGTGCATGATGAAACGGTTCAAAACGACCTTAATCCAGGCACAGACGATGATCTTTCTACCCAGGTGCCACCTATTTTCGAAGCCATGTTTTCGTTGATGGGTCGAAGAAACCCGTATCCAAGATTCGGACTTCTTGAAGCTCTTGATACTTTTACCAGAGAACGAATGGCCGGAAGAAACCCGAACTTCGATGTTAGGAGGAGATCCAGTTCTATCCCAGAGCAGAATTTGGATTTTTTCAATTCTTTTTGGTCATTCCATGGACACGCTCCTGGTTCGACCTTCTCTAGTGTTTCTCCAGAAGGTAGATCTAGTCAGCATGCGGCACTGGAAGCACTAGCTGCACTTTCCTTCAACGAACAAAGAGATCCAGCTCCAGCTCCGGCTTCCCGCTCGTCTATAGAAGCAATGCCTACGATCAAGATCAACCAAATGCACCTTGGCACTGACTCTCATTGTCCTGTCTGTAAAGAAAAATTTGAGCTGGGATCTGAAGCCAAAGAGATGCCATGTAATCATATTTATCACACTGATTGCATCCTTCCTTGGCTGGCCCAGCACAACACTTGCCCGGTTTGTCGACACGAGCTGCCTCAGCAGGATGGAAGACACGGTTGGGGAGGGGACAGCAGCAGCAACAACAACAGTAGTGAAGTCTCAAATGAGAGGGGGGTTTTTCTGAGTAGGTATGCGTTCCCAGAGCATTCTGCTCCTCGAAATGTAGTTACTCGTTTCAGCAGTGGGATTCGTAGAAATGGCAGCCCACCTACAAATCGCGAGCAAGATAACGAACCGAGTTATCCTGAATGGCCTCCTCCTTTCAATTTCTAA

Coding sequence (CDS)

ATGTTAAAGAACGGTGAATGGGTCAAATTGGGAAGTGCGTGGAGGCCGCCATTTTTGTTGGTGAAAGGCATCGCTCCTTCTCTCTTTCGTGATCCAAATCTTCACCAAACTGCTCTTGTTGTCCCTCCCTCCCTCCCTCTTCCCCAGGCTCCTACTTCAGCGCCGGTACCTGTTGCCTTTGAGAGAAGGATGTCATCTGGTGGTGAAGATACCCATTGGTGCTATCAGTGCAACCATTCATTCTGGCTTAATGGAGACGAAGACATAGCTTGCCCTTATTGTAATGGTGGTTTCATTGAAGAACTTAACGATGTGCATGATGAAACGGTTCAAAACGACCTTAATCCAGGCACAGACGATGATCTTTCTACCCAGGTGCCACCTATTTTCGAAGCCATGTTTTCGTTGATGGGTCGAAGAAACCCGTATCCAAGATTCGGACTTCTTGAAGCTCTTGATACTTTTACCAGAGAACGAATGGCCGGAAGAAACCCGAACTTCGATGTTAGGAGGAGATCCAGTTCTATCCCAGAGCAGAATTTGGATTTTTTCAATTCTTTTTGGTCATTCCATGGACACGCTCCTGGTTCGACCTTCTCTAGTGTTTCTCCAGAAGGTAGATCTAGTCAGCATGCGGCACTGGAAGCACTAGCTGCACTTTCCTTCAACGAACAAAGAGATCCAGCTCCAGCTCCGGCTTCCCGCTCGTCTATAGAAGCAATGCCTACGATCAAGATCAACCAAATGCACCTTGGCACTGACTCTCATTGTCCTGTCTGTAAAGAAAAATTTGAGCTGGGATCTGAAGCCAAAGAGATGCCATGTAATCATATTTATCACACTGATTGCATCCTTCCTTGGCTGGCCCAGCACAACACTTGCCCGGTTTGTCGACACGAGCTGCCTCAGCAGGATGGAAGACACGGTTGGGGAGGGGACAGCAGCAGCAACAACAACAGTAGTGAAGTCTCAAATGAGAGGGGGGTTTTTCTGAGTAGGTATGCGTTCCCAGAGCATTCTGCTCCTCGAAATGTAGTTACTCGTTTCAGCAGTGGGATTCGTAGAAATGGCAGCCCACCTACAAATCGCGAGCAAGATAACGAACCGAGTTATCCTGAATGGCCTCCTCCTTTCAATTTCTAA

Protein sequence

MLKNGEWVKLGSAWRPPFLLVKGIAPSLFRDPNLHQTALVVPPSLPLPQAPTSAPVPVAFERRMSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQVPPIFEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMPTIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELPQQDGRHGWGGDSSSNNNSSEVSNERGVFLSRYAFPEHSAPRNVVTRFSSGIRRNGSPPTNREQDNEPSYPEWPPPFNF

Homology

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BLAST of Sed0014601 vs. NCBI nr
Match: KAG6588139.1 (E3 ubiquitin-protein ligase RZF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.1 bits (1359), Expect = 6.3e-146
Identity = 257/319 (80.56%), Postives = 276/319 (86.52%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLS 123
           MSSGGEDTHWCYQCN SFWLNG EDIACPYCNGGFIEELNDVHD+ VQ+D +   +DDLS
Sbjct: 1   MSSGGEDTHWCYQCNRSFWLNG-EDIACPYCNGGFIEELNDVHDDAVQDDFHSAIEDDLS 60

Query: 124 TQVPPIFEAMFSLMGRRNPYPRFGLL-EALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           +QVPPIFEAMF+LMGRRNPYPRF LL EA+D  TRERMAGRNPN DVRRRS+SIP QNLD
Sbjct: 61  SQVPPIFEAMFALMGRRNPYPRFRLLDEAVDALTRERMAGRNPNIDVRRRSNSIPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMP 243
            FNSFWSFH HAPG +F+SV+PEGRSSQH ALEALAALSFNEQRDP P PAS SSIEAMP
Sbjct: 121 IFNSFWSFHEHAPGPSFASVAPEGRSSQHVALEALAALSFNEQRDPVPTPASHSSIEAMP 180

Query: 244 TIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELP 303
           TIKINQMHLGTD+HCPVCKEKFELGSEAKEMPCNHIYH DCILPWL QHNTCPVCR ELP
Sbjct: 181 TIKINQMHLGTDTHCPVCKEKFELGSEAKEMPCNHIYHADCILPWLVQHNTCPVCRLELP 240

Query: 304 QQDGRHGWGGDSSSNNNSSEVSNERGVFL-SRYAFPEHSAPRNVVTRFSSGIRRNGSPPT 363
           QQD RHGWGG+SSSN   SEVSNER + L  R+AFP+   P++  TRFSS I RNG   T
Sbjct: 241 QQDSRHGWGGNSSSN---SEVSNEREIILRRRFAFPDFFTPQSAGTRFSSRIGRNGRAST 300

Query: 364 NREQDNEPSYPEWPPPFNF 381
           NREQDNE SYPEW PPFN+
Sbjct: 301 NREQDNEISYPEW-PPFNY 314

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BLAST of Sed0014601 vs. NCBI nr
Match: XP_023531171.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023531172.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023531173.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023531174.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 526.6 bits (1355), Expect = 1.8e-145
Identity = 256/319 (80.25%), Postives = 276/319 (86.52%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLS 123
           MSSGGEDTHWCYQCN S WLNG EDIACPYCNGGFIEELNDVHD+TVQ+D +   +DDLS
Sbjct: 1   MSSGGEDTHWCYQCNRSSWLNG-EDIACPYCNGGFIEELNDVHDDTVQDDFHSAIEDDLS 60

Query: 124 TQVPPIFEAMFSLMGRRNPYPRFGLL-EALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           +QVPPIFEAMF+LMGRRNPYPRF LL EA+D  TRERMAGRNPNFDVRRRS+SIP QNLD
Sbjct: 61  SQVPPIFEAMFALMGRRNPYPRFRLLDEAVDALTRERMAGRNPNFDVRRRSNSIPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMP 243
            FNSFWSFH HAPG +F+SV+PEGRSSQH ALEALAALSFNEQRDP P PAS SSIEAMP
Sbjct: 121 IFNSFWSFHEHAPGPSFASVAPEGRSSQHVALEALAALSFNEQRDPVPTPASHSSIEAMP 180

Query: 244 TIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELP 303
           TIKINQMHLGTD+HCPVCKEKFELGSEAKEMPCNHIYH DCILPWL QHNTCPVCR ELP
Sbjct: 181 TIKINQMHLGTDTHCPVCKEKFELGSEAKEMPCNHIYHADCILPWLVQHNTCPVCRLELP 240

Query: 304 QQDGRHGWGGDSSSNNNSSEVSNERGVFL-SRYAFPEHSAPRNVVTRFSSGIRRNGSPPT 363
           QQD RHGWGG+S+SN    EVSNER + L  R+AFP+   P++  TRFSS I RNG   T
Sbjct: 241 QQDSRHGWGGNSNSN---GEVSNEREIILRRRFAFPDFFTPQSAGTRFSSRIGRNGRAST 300

Query: 364 NREQDNEPSYPEWPPPFNF 381
           NREQDNE SYPEW PPFN+
Sbjct: 301 NREQDNEISYPEW-PPFNY 314

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BLAST of Sed0014601 vs. NCBI nr
Match: XP_022933367.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022933368.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022933370.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022933372.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata])

HSP 1 Score: 526.6 bits (1355), Expect = 1.8e-145
Identity = 256/319 (80.25%), Postives = 275/319 (86.21%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLS 123
           MSSGGEDTHWCYQCN SFWLNG EDIACPYCNGGFIEELNDVHD+ VQ+D +   +DDLS
Sbjct: 1   MSSGGEDTHWCYQCNRSFWLNG-EDIACPYCNGGFIEELNDVHDDAVQDDFHSAIEDDLS 60

Query: 124 TQVPPIFEAMFSLMGRRNPYPRFGLL-EALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           +QVPPIFEAMF+LMGRRNPYPRF LL EA+D  TRERMAGRNPN DVRRRS+SIP QNLD
Sbjct: 61  SQVPPIFEAMFALMGRRNPYPRFRLLDEAVDALTRERMAGRNPNIDVRRRSNSIPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMP 243
            FNSFWSFH HAPG +F+SV+PEGRSSQH ALEALAALSFNEQRDP P PAS SSIEAMP
Sbjct: 121 IFNSFWSFHEHAPGPSFASVAPEGRSSQHVALEALAALSFNEQRDPVPTPASHSSIEAMP 180

Query: 244 TIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELP 303
           TIKINQMHLGTD+HCPVCKEKFELGSEAKEMPCNHIYH DCILPWL QHNTCPVCR ELP
Sbjct: 181 TIKINQMHLGTDTHCPVCKEKFELGSEAKEMPCNHIYHADCILPWLVQHNTCPVCRLELP 240

Query: 304 QQDGRHGWGGDSSSNNNSSEVSNERGVFL-SRYAFPEHSAPRNVVTRFSSGIRRNGSPPT 363
           QQD RHGWGG+SSSN    EVSNER + L  R+AFP+   P++  TRFSS I RNG   T
Sbjct: 241 QQDSRHGWGGNSSSN---GEVSNEREIILRRRFAFPDFFTPQSAGTRFSSRIGRNGRAST 300

Query: 364 NREQDNEPSYPEWPPPFNF 381
           NREQDNE SYPEW PPFN+
Sbjct: 301 NREQDNEISYPEW-PPFNY 314

[Close]

BLAST of Sed0014601 vs. NCBI nr
Match: XP_022967835.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022967844.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022967851.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022967859.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima])

HSP 1 Score: 523.9 bits (1348), Expect = 1.2e-144
Identity = 256/319 (80.25%), Postives = 275/319 (86.21%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLS 123
           MSSGGEDTHWCYQCN SF LNG EDIACPYCNGGFIEELNDVHD+ VQ+D +   +DDLS
Sbjct: 1   MSSGGEDTHWCYQCNRSFLLNG-EDIACPYCNGGFIEELNDVHDDAVQDDFHSAIEDDLS 60

Query: 124 TQVPPIFEAMFSLMGRRNPYPRFGLL-EALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           +QVPPIFEAMF+LMGRRNPYPRF LL EA+D  TRERMAGRNPNFDVRRRS+SIP QNLD
Sbjct: 61  SQVPPIFEAMFALMGRRNPYPRFRLLDEAVDALTRERMAGRNPNFDVRRRSNSIPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMP 243
            FNSFWSFH HAPG +F+SV+PEGRSSQH ALEALAALSFNEQRDP P PAS SSIEAMP
Sbjct: 121 IFNSFWSFHEHAPGPSFASVAPEGRSSQHVALEALAALSFNEQRDPVPTPASHSSIEAMP 180

Query: 244 TIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELP 303
           TIKINQMHLGTD+HCPVCKEKFELGSEAKEMPCNHIYH DCILPWL QHNTCPVCR ELP
Sbjct: 181 TIKINQMHLGTDTHCPVCKEKFELGSEAKEMPCNHIYHADCILPWLVQHNTCPVCRLELP 240

Query: 304 QQDGRHGWGGDSSSNNNSSEVSNERGVFL-SRYAFPEHSAPRNVVTRFSSGIRRNGSPPT 363
           QQD RHGWGG+SSSN    EVSNER + L  R+AFP+   P++  TRFSS I RNG   T
Sbjct: 241 QQDSRHGWGGNSSSN---GEVSNEREIILRRRFAFPDFFTPQSAGTRFSSRIGRNGRAST 300

Query: 364 NREQDNEPSYPEWPPPFNF 381
           NREQDNE SYPEW PPFN+
Sbjct: 301 NREQDNEISYPEW-PPFNY 314

[Close]

BLAST of Sed0014601 vs. NCBI nr
Match: XP_022147727.1 (probable E3 ubiquitin-protein ligase RHC1A isoform X1 [Momordica charantia])

HSP 1 Score: 504.2 bits (1297), Expect = 9.7e-139
Identity = 256/365 (70.14%), Postives = 287/365 (78.63%), Query Frame = 0


Query: 17  PFLLVKGIAPSLFRDPNLHQTALVVPPSLPLPQAPTSAPVPVAFERRMSSGGEDTHWCYQ 76
           P LL   ++P    DPNLH        SL      + +   VAFERRMSSGGEDTHWCYQ
Sbjct: 16  PLLLSLSLSP---LDPNLHPLLCF---SLFRGFHCSYSSSAVAFERRMSSGGEDTHWCYQ 75

Query: 77  CNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGT-DDDLSTQVPPIFEAMFS 136
           CNHSFWL G EDI CPYCNGGFIEELND+HD T+QND N GT ++D S+QVPPIFEAMF+
Sbjct: 76  CNHSFWLGG-EDIVCPYCNGGFIEELNDLHDGTIQNDTNLGTEEEDFSSQVPPIFEAMFA 135

Query: 137 LMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWSFHGHAP 196
           LMGRR+PYPRFGLLEA+D FTRERMAGRNPNFDVRRRSSS+P QNLDFFNSFWSFH H P
Sbjct: 136 LMGRRSPYPRFGLLEAVDAFTRERMAGRNPNFDVRRRSSSVPGQNLDFFNSFWSFHEHVP 195

Query: 197 GSTFSSVSPEGRSSQHAALEALAA-LSFNEQRDPAPAPASRSSIEAMPTIKINQMHLGTD 256
           G +F+SV+PEGRSSQ + L+AL A ++ NE+RDP PAPAS SSIEAMPTIKINQMHLGTD
Sbjct: 196 GPSFASVAPEGRSSQLSGLQALGAQITMNERRDPVPAPASHSSIEAMPTIKINQMHLGTD 255

Query: 257 SHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELPQQDGRHGWGGDS 316
           SHCPVCKEKFELGSEA+EMPCNHIYH+DCILPWL QHNTCPVCR ELPQQD RH W G S
Sbjct: 256 SHCPVCKEKFELGSEAREMPCNHIYHSDCILPWLVQHNTCPVCRLELPQQDTRHAWSGGS 315

Query: 317 SSNNNSSEVSNERGV----FLSRYAFPEHSAPRNVVTRFSSGIRRNGSPPTNREQDNEPS 376
           SS++++ EVSN R +       R    +     NV+ RFSSGIRRNG+  TN   DNE S
Sbjct: 316 SSSSSNGEVSNGREITQLGLGRRNPLHDFWTTSNVLHRFSSGIRRNGT-STNHYHDNEMS 372

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BLAST of Sed0014601 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.3e-42
Identity = 121/345 (35.07%), Postives = 165/345 (47.83%), Query Frame = 0


Query: 66  SGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQ 125
           S   +THWC++C  +  L+G E + C YC GGF+EEL                  D++  
Sbjct: 2   SSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEEL------------------DMAQA 61

Query: 126 VPPIFEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFN 185
            P  F+   S  G       F L++A   F R R+A R+ + ++R R+ S   +N     
Sbjct: 62  SP--FDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLA 121

Query: 186 SFWSFHGHAP---------GSTFSSVSP-----EGRSSQH---AALEALAALSFNEQRDP 245
               F G  P          + F+  SP      G +  +     LE L           
Sbjct: 122 PLLIFGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR 181

Query: 246 APAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPW 305
            P PA RS+I+A+PTIKI Q HL  +DS+CPVCK++FELGSEAK+MPCNHIYH+DCI+PW
Sbjct: 182 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 241

Query: 306 LAQHNTCPVCRHELPQQDG-----------RHGWGGDSSSNNNSSEVSNERGVFLSRYAF 365
           L QHN+CPVCR ELP   G           R+     SSS++NS E  NER    S +  
Sbjct: 242 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 301

Query: 366 PEHSAPRNVVTRFSSGIRRNGSPPTN------REQDNEPSYPEWP 376
              S   +  T+   G R + +   N      + Q +   Y  WP
Sbjct: 302 FRSSGSSSSSTQNRGGTRNSDTSDENHNYHQQQHQQSYMGYSGWP 325

[Close]

BLAST of Sed0014601 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.3e-41
Identity = 103/293 (35.15%), Postives = 139/293 (47.44%), Query Frame = 0


Query: 70  DTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQVPPI 129
           +THWC++C  + WL    D  C YC GGF+EE+ D+       D+               
Sbjct: 6   NTHWCHRCQRAVWLRA-RDAVCSYCGGGFVEEI-DIGPSRAHRDVERD------------ 65

Query: 130 FEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWS 189
                         P F L+EA   F R R+A R+ + ++  R  S   ++         
Sbjct: 66  --------------PTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLI 125

Query: 190 FHGHAP----GSTFSSV----------------SPEGRSSQHAALEALAALSFNEQRDPA 249
           F G AP    G   SSV                +  G       LE L     +      
Sbjct: 126 FGGQAPFRLAGGDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRG 185

Query: 250 PAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWL 309
           P PA +SSI+A+PTIKI Q HL  +DSHCPVCK++FEL SEAK+MPC+HIYH+DCI+PWL
Sbjct: 186 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 245

Query: 310 AQHNTCPVCRHELPQQDGRHGWGGDSSSNNNSSEVSNERGVFLSRYAFPEHSA 342
            QHN+CPVCR ELP +          + + N  E S  R +F + + F   S+
Sbjct: 246 VQHNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSS 270

[Close]

BLAST of Sed0014601 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.5e-33
Identity = 98/296 (33.11%), Postives = 146/296 (49.32%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDD-- 123
           M+SG   ++WCY C+   W++  + I+CP C+GGF+E + +  D T  +     T     
Sbjct: 1   MASG---SYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHR 60

Query: 124 LSTQVPPIFEA----MFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRR----- 183
             T+ PP   +      S+    +P P         T      + R+PN  +  R     
Sbjct: 61  SPTRFPPPSSSSSTPSASMHADNSPTP---------TIVTRTRSNRSPNPVIVLRGSAAA 120

Query: 184 -SSSIPEQNLDFFNSFWSFHGHAPGSTFSSVSPEGR-----SSQHAALEALAALSFNEQR 243
            SS +  + LD  ++F  ++     S    + P        S     L+ ++ +  N  R
Sbjct: 121 PSSDVVSEGLD-RSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNR 180

Query: 244 DPAPA---PASRSSIEAMPTIKINQMHLGTD--SHCPVCKEKFELGSEAKEMPCNHIYHT 303
           +       PAS+S+IEA+P I+I+  HL +D  SHC VCKE F L S A+EMPCNHIYH 
Sbjct: 181 NLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHP 240

Query: 304 DCILPWLAQHNTCPVCRHELPQQDGRHGWGGDSSSNNNSSEVSNERGVFLSRYAFP 338
           DCILPWLA  N+CPVCRHELP +D   G G   ++   ++E   +    L+ +  P
Sbjct: 241 DCILPWLAIRNSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLP 281

[Close]

BLAST of Sed0014601 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.8e-29
Identity = 86/262 (32.82%), Postives = 128/262 (48.85%), Query Frame = 0


Query: 71  THWCYQCNH--SFWLNGDE----DIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLST 130
           ++WCY C    S W +        +ACP+C+GGFIE++ND      +  +        ST
Sbjct: 17  SYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSAATELTI------PAST 76

Query: 131 QVPPIFEAMFSLMGRRNP--YPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 190
           +V  I     S++ RR     P F  +  L     ER  G   +    RR+        +
Sbjct: 77  EVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRA-------FE 136

Query: 191 FFNSFWSFHG--HAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEA 250
           F+    S  G    P S    +   G       L  + A +    R   P PAS+S+IE+
Sbjct: 137 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNP-PASKSAIES 196

Query: 251 MPTIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHE 310
           +P ++I+  H+G++++C VC E FE  +EA+EMPC H++H DCI+PWL+  N+CPVCR E
Sbjct: 197 LPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFE 256

Query: 311 LPQQDGRHGWGGDSSSNNNSSE 323
           LP +  R        SNNN  +
Sbjct: 257 LPSEPNRR-------SNNNEED 257

[Close]

BLAST of Sed0014601 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-26
Identity = 80/244 (32.79%), Postives = 115/244 (47.13%), Query Frame = 0


Query: 71  THWCYQCNH--SFWLNGDED--IACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQV 130
           ++WCY C    S W + D +  + CPYCNGGFIEE+ D  + TV            + +V
Sbjct: 30  SYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTV------AAIPASTPEV 89

Query: 131 PPIFEAMFSLMGRRNPYPRFGLLEALDTF------TRERMAGRNPNFDVRRRSSSIPEQN 190
             + E   S++ RR    R      +           ER+     +   R R +      
Sbjct: 90  RSVEETHRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRA------ 149

Query: 191 LDFFNSFWSFHG--HAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSI 250
            +F+    S  G    P S    +   G       L  + A      R   P PAS+S+I
Sbjct: 150 YEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNP-PASKSAI 209

Query: 251 EAMPTIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCR 303
           E++P ++I+  H   +++C VC E FE G E +EMPC HI+H DCI+PWL+  N+CPVCR
Sbjct: 210 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 260

[Close]

BLAST of Sed0014601 vs. ExPASy TrEMBL
Match: A0A6J1F4J7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111440731 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 8.9e-146
Identity = 256/319 (80.25%), Postives = 275/319 (86.21%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLS 123
           MSSGGEDTHWCYQCN SFWLNG EDIACPYCNGGFIEELNDVHD+ VQ+D +   +DDLS
Sbjct: 1   MSSGGEDTHWCYQCNRSFWLNG-EDIACPYCNGGFIEELNDVHDDAVQDDFHSAIEDDLS 60

Query: 124 TQVPPIFEAMFSLMGRRNPYPRFGLL-EALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           +QVPPIFEAMF+LMGRRNPYPRF LL EA+D  TRERMAGRNPN DVRRRS+SIP QNLD
Sbjct: 61  SQVPPIFEAMFALMGRRNPYPRFRLLDEAVDALTRERMAGRNPNIDVRRRSNSIPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMP 243
            FNSFWSFH HAPG +F+SV+PEGRSSQH ALEALAALSFNEQRDP P PAS SSIEAMP
Sbjct: 121 IFNSFWSFHEHAPGPSFASVAPEGRSSQHVALEALAALSFNEQRDPVPTPASHSSIEAMP 180

Query: 244 TIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELP 303
           TIKINQMHLGTD+HCPVCKEKFELGSEAKEMPCNHIYH DCILPWL QHNTCPVCR ELP
Sbjct: 181 TIKINQMHLGTDTHCPVCKEKFELGSEAKEMPCNHIYHADCILPWLVQHNTCPVCRLELP 240

Query: 304 QQDGRHGWGGDSSSNNNSSEVSNERGVFL-SRYAFPEHSAPRNVVTRFSSGIRRNGSPPT 363
           QQD RHGWGG+SSSN    EVSNER + L  R+AFP+   P++  TRFSS I RNG   T
Sbjct: 241 QQDSRHGWGGNSSSN---GEVSNEREIILRRRFAFPDFFTPQSAGTRFSSRIGRNGRAST 300

Query: 364 NREQDNEPSYPEWPPPFNF 381
           NREQDNE SYPEW PPFN+
Sbjct: 301 NREQDNEISYPEW-PPFNY 314

[Close]

BLAST of Sed0014601 vs. ExPASy TrEMBL
Match: A0A6J1HT80 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467227 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.7e-145
Identity = 256/319 (80.25%), Postives = 275/319 (86.21%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLS 123
           MSSGGEDTHWCYQCN SF LNG EDIACPYCNGGFIEELNDVHD+ VQ+D +   +DDLS
Sbjct: 1   MSSGGEDTHWCYQCNRSFLLNG-EDIACPYCNGGFIEELNDVHDDAVQDDFHSAIEDDLS 60

Query: 124 TQVPPIFEAMFSLMGRRNPYPRFGLL-EALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           +QVPPIFEAMF+LMGRRNPYPRF LL EA+D  TRERMAGRNPNFDVRRRS+SIP QNLD
Sbjct: 61  SQVPPIFEAMFALMGRRNPYPRFRLLDEAVDALTRERMAGRNPNFDVRRRSNSIPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAALSFNEQRDPAPAPASRSSIEAMP 243
            FNSFWSFH HAPG +F+SV+PEGRSSQH ALEALAALSFNEQRDP P PAS SSIEAMP
Sbjct: 121 IFNSFWSFHEHAPGPSFASVAPEGRSSQHVALEALAALSFNEQRDPVPTPASHSSIEAMP 180

Query: 244 TIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELP 303
           TIKINQMHLGTD+HCPVCKEKFELGSEAKEMPCNHIYH DCILPWL QHNTCPVCR ELP
Sbjct: 181 TIKINQMHLGTDTHCPVCKEKFELGSEAKEMPCNHIYHADCILPWLVQHNTCPVCRLELP 240

Query: 304 QQDGRHGWGGDSSSNNNSSEVSNERGVFL-SRYAFPEHSAPRNVVTRFSSGIRRNGSPPT 363
           QQD RHGWGG+SSSN    EVSNER + L  R+AFP+   P++  TRFSS I RNG   T
Sbjct: 241 QQDSRHGWGGNSSSN---GEVSNEREIILRRRFAFPDFFTPQSAGTRFSSRIGRNGRAST 300

Query: 364 NREQDNEPSYPEWPPPFNF 381
           NREQDNE SYPEW PPFN+
Sbjct: 301 NREQDNEISYPEW-PPFNY 314

[Close]

BLAST of Sed0014601 vs. ExPASy TrEMBL
Match: A0A6J1D364 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111016591 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.7e-139
Identity = 256/365 (70.14%), Postives = 287/365 (78.63%), Query Frame = 0


Query: 17  PFLLVKGIAPSLFRDPNLHQTALVVPPSLPLPQAPTSAPVPVAFERRMSSGGEDTHWCYQ 76
           P LL   ++P    DPNLH        SL      + +   VAFERRMSSGGEDTHWCYQ
Sbjct: 16  PLLLSLSLSP---LDPNLHPLLCF---SLFRGFHCSYSSSAVAFERRMSSGGEDTHWCYQ 75

Query: 77  CNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGT-DDDLSTQVPPIFEAMFS 136
           CNHSFWL G EDI CPYCNGGFIEELND+HD T+QND N GT ++D S+QVPPIFEAMF+
Sbjct: 76  CNHSFWLGG-EDIVCPYCNGGFIEELNDLHDGTIQNDTNLGTEEEDFSSQVPPIFEAMFA 135

Query: 137 LMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWSFHGHAP 196
           LMGRR+PYPRFGLLEA+D FTRERMAGRNPNFDVRRRSSS+P QNLDFFNSFWSFH H P
Sbjct: 136 LMGRRSPYPRFGLLEAVDAFTRERMAGRNPNFDVRRRSSSVPGQNLDFFNSFWSFHEHVP 195

Query: 197 GSTFSSVSPEGRSSQHAALEALAA-LSFNEQRDPAPAPASRSSIEAMPTIKINQMHLGTD 256
           G +F+SV+PEGRSSQ + L+AL A ++ NE+RDP PAPAS SSIEAMPTIKINQMHLGTD
Sbjct: 196 GPSFASVAPEGRSSQLSGLQALGAQITMNERRDPVPAPASHSSIEAMPTIKINQMHLGTD 255

Query: 257 SHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHELPQQDGRHGWGGDS 316
           SHCPVCKEKFELGSEA+EMPCNHIYH+DCILPWL QHNTCPVCR ELPQQD RH W G S
Sbjct: 256 SHCPVCKEKFELGSEAREMPCNHIYHSDCILPWLVQHNTCPVCRLELPQQDTRHAWSGGS 315

Query: 317 SSNNNSSEVSNERGV----FLSRYAFPEHSAPRNVVTRFSSGIRRNGSPPTNREQDNEPS 376
           SS++++ EVSN R +       R    +     NV+ RFSSGIRRNG+  TN   DNE S
Sbjct: 316 SSSSSNGEVSNGREITQLGLGRRNPLHDFWTTSNVLHRFSSGIRRNGT-STNHYHDNEMS 372

[Close]

BLAST of Sed0014601 vs. ExPASy TrEMBL
Match: A0A0A0LZS8 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G600760 PE=4 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 6.4e-136
Identity = 247/348 (70.98%), Postives = 273/348 (78.45%), Query Frame = 0


Query: 31  DPNLHQTALVVPPSLPLPQAPTSAPVPVAFERRMSSGGEDTHWCYQCNHSFWLNGDEDIA 90
           DPNLH   L     L LPQ         A ERRMSS GEDTHWC+QC+HSFWL+G EDI 
Sbjct: 30  DPNLHSLFLF----LLLPQPSHFPYFSFAIERRMSSFGEDTHWCHQCHHSFWLDG-EDIV 89

Query: 91  CPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQVPPIFEAMFSLMGRRNPYPRFGLLE 150
           CP+C GGF+EELND HDETVQND NPG ++DLSTQVPPIFEAMF+LMGRR+PYPRFGLLE
Sbjct: 90  CPHCYGGFVEELNDEHDETVQNDFNPGIEEDLSTQVPPIFEAMFALMGRRSPYPRFGLLE 149

Query: 151 ALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWSFHGHAPGSTFSSVSPEGRSSQ 210
           A+DTFTRERMAGRNPNFDVRRRS S+P QNLDFFNSFWSFH H  GSTF++V+PEGRSSQ
Sbjct: 150 AVDTFTRERMAGRNPNFDVRRRSGSVPGQNLDFFNSFWSFHDHMSGSTFANVTPEGRSSQ 209

Query: 211 HAALEALAA-LSFNEQRDPAPAPASRSSIEAMPTIKINQMHLGTDSHCPVCKEKFELGSE 270
           H  LE LAA LS NEQR+P P PAS S IEAMPTIKINQMHLGTDSHCPVCKEKFEL SE
Sbjct: 210 HTGLEELAAQLSLNEQREPVPTPASHSCIEAMPTIKINQMHLGTDSHCPVCKEKFELESE 269

Query: 271 AKEMPCNHIYHTDCILPWLAQHNTCPVCRHELPQQDGRHGWGGDSSSNNNSSEVSNERGV 330
           AK +PCNHIYH DCILPWL QHNTCPVCR ELPQQ+  H WGG   S +N+SE  NER +
Sbjct: 270 AKALPCNHIYHNDCILPWLVQHNTCPVCRLELPQQESGHSWGG---SGDNNSEDLNEREI 329

Query: 331 ----FLSRYAFPEHSAPRNVVTRFSSGIRRNGSPPTNREQDNEPSYPE 374
                  R+  P+  APR +VTRFSSGI  NG   ++R+ DNE  YPE
Sbjct: 330 TQRNLRRRHPIPDFFAPRRIVTRFSSGIHINGL-SSDRDHDNEMGYPE 368

[Close]

BLAST of Sed0014601 vs. ExPASy TrEMBL
Match: A0A6J1D235 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111016591 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 2.4e-135
Identity = 239/318 (75.16%), Postives = 266/318 (83.65%), Query Frame = 0


Query: 64  MSSGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGT-DDDL 123
           MSSGGEDTHWCYQCNHSFWL G EDI CPYCNGGFIEELND+HD T+QND N GT ++D 
Sbjct: 1   MSSGGEDTHWCYQCNHSFWLGG-EDIVCPYCNGGFIEELNDLHDGTIQNDTNLGTEEEDF 60

Query: 124 STQVPPIFEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLD 183
           S+QVPPIFEAMF+LMGRR+PYPRFGLLEA+D FTRERMAGRNPNFDVRRRSSS+P QNLD
Sbjct: 61  SSQVPPIFEAMFALMGRRSPYPRFGLLEAVDAFTRERMAGRNPNFDVRRRSSSVPGQNLD 120

Query: 184 FFNSFWSFHGHAPGSTFSSVSPEGRSSQHAALEALAA-LSFNEQRDPAPAPASRSSIEAM 243
           FFNSFWSFH H PG +F+SV+PEGRSSQ + L+AL A ++ NE+RDP PAPAS SSIEAM
Sbjct: 121 FFNSFWSFHEHVPGPSFASVAPEGRSSQLSGLQALGAQITMNERRDPVPAPASHSSIEAM 180

Query: 244 PTIKINQMHLGTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWLAQHNTCPVCRHEL 303
           PTIKINQMHLGTDSHCPVCKEKFELGSEA+EMPCNHIYH+DCILPWL QHNTCPVCR EL
Sbjct: 181 PTIKINQMHLGTDSHCPVCKEKFELGSEAREMPCNHIYHSDCILPWLVQHNTCPVCRLEL 240

Query: 304 PQQDGRHGWGGDSSSNNNSSEVSNERGV----FLSRYAFPEHSAPRNVVTRFSSGIRRNG 363
           PQQD RH W G SSS++++ EVSN R +       R    +     NV+ RFSSGIRRNG
Sbjct: 241 PQQDTRHAWSGGSSSSSSNGEVSNGREITQLGLGRRNPLHDFWTTSNVLHRFSSGIRRNG 300

Query: 364 SPPTNREQDNEPSYPEWP 376
           +  TN   DNE SYPEWP
Sbjct: 301 T-STNHYHDNEMSYPEWP 316

[Close]

BLAST of Sed0014601 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-43
Identity = 121/345 (35.07%), Postives = 165/345 (47.83%), Query Frame = 0


Query: 66  SGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQ 125
           S   +THWC++C  +  L+G E + C YC GGF+EEL                  D++  
Sbjct: 2   SSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEEL------------------DMAQA 61

Query: 126 VPPIFEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFN 185
            P  F+   S  G       F L++A   F R R+A R+ + ++R R+ S   +N     
Sbjct: 62  SP--FDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLA 121

Query: 186 SFWSFHGHAP---------GSTFSSVSP-----EGRSSQH---AALEALAALSFNEQRDP 245
               F G  P          + F+  SP      G +  +     LE L           
Sbjct: 122 PLLIFGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR 181

Query: 246 APAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPW 305
            P PA RS+I+A+PTIKI Q HL  +DS+CPVCK++FELGSEAK+MPCNHIYH+DCI+PW
Sbjct: 182 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 241

Query: 306 LAQHNTCPVCRHELPQQDG-----------RHGWGGDSSSNNNSSEVSNERGVFLSRYAF 365
           L QHN+CPVCR ELP   G           R+     SSS++NS E  NER    S +  
Sbjct: 242 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 301

Query: 366 PEHSAPRNVVTRFSSGIRRNGSPPTN------REQDNEPSYPEWP 376
              S   +  T+   G R + +   N      + Q +   Y  WP
Sbjct: 302 FRSSGSSSSSTQNRGGTRNSDTSDENHNYHQQQHQQSYMGYSGWP 325

[Close]

BLAST of Sed0014601 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-43
Identity = 121/345 (35.07%), Postives = 165/345 (47.83%), Query Frame = 0


Query: 66  SGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQ 125
           S   +THWC++C  +  L+G E + C YC GGF+EEL                  D++  
Sbjct: 2   SSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEEL------------------DMAQA 61

Query: 126 VPPIFEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFN 185
            P  F+   S  G       F L++A   F R R+A R+ + ++R R+ S   +N     
Sbjct: 62  SP--FDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLA 121

Query: 186 SFWSFHGHAP---------GSTFSSVSP-----EGRSSQH---AALEALAALSFNEQRDP 245
               F G  P          + F+  SP      G +  +     LE L           
Sbjct: 122 PLLIFGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR 181

Query: 246 APAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPW 305
            P PA RS+I+A+PTIKI Q HL  +DS+CPVCK++FELGSEAK+MPCNHIYH+DCI+PW
Sbjct: 182 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 241

Query: 306 LAQHNTCPVCRHELPQQDG-----------RHGWGGDSSSNNNSSEVSNERGVFLSRYAF 365
           L QHN+CPVCR ELP   G           R+     SSS++NS E  NER    S +  
Sbjct: 242 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 301

Query: 366 PEHSAPRNVVTRFSSGIRRNGSPPTN------REQDNEPSYPEWP 376
              S   +  T+   G R + +   N      + Q +   Y  WP
Sbjct: 302 FRSSGSSSSSTQNRGGTRNSDTSDENHNYHQQQHQQSYMGYSGWP 325

[Close]

BLAST of Sed0014601 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-43
Identity = 121/345 (35.07%), Postives = 165/345 (47.83%), Query Frame = 0


Query: 66  SGGEDTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQ 125
           S   +THWC++C  +  L+G E + C YC GGF+EEL                  D++  
Sbjct: 2   SSSRNTHWCHRCQRAVRLHGQEPV-CFYCGGGFVEEL------------------DMAQA 61

Query: 126 VPPIFEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFN 185
            P  F+   S  G       F L++A   F R R+A R+ + ++R R+ S   +N     
Sbjct: 62  SP--FDMFRSHRGVVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLA 121

Query: 186 SFWSFHGHAP---------GSTFSSVSP-----EGRSSQH---AALEALAALSFNEQRDP 245
               F G  P          + F+  SP      G +  +     LE L           
Sbjct: 122 PLLIFGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR 181

Query: 246 APAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPW 305
            P PA RS+I+A+PTIKI Q HL  +DS+CPVCK++FELGSEAK+MPCNHIYH+DCI+PW
Sbjct: 182 GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPW 241

Query: 306 LAQHNTCPVCRHELPQQDG-----------RHGWGGDSSSNNNSSEVSNERGVFLSRYAF 365
           L QHN+CPVCR ELP   G           R+     SSS++NS E  NER    S +  
Sbjct: 242 LVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWP 301

Query: 366 PEHSAPRNVVTRFSSGIRRNGSPPTN------REQDNEPSYPEWP 376
              S   +  T+   G R + +   N      + Q +   Y  WP
Sbjct: 302 FRSSGSSSSSTQNRGGTRNSDTSDENHNYHQQQHQQSYMGYSGWP 325

[Close]

BLAST of Sed0014601 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-42
Identity = 103/293 (35.15%), Postives = 139/293 (47.44%), Query Frame = 0


Query: 70  DTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQVPPI 129
           +THWC++C  + WL    D  C YC GGF+EE+ D+       D+               
Sbjct: 6   NTHWCHRCQRAVWLRA-RDAVCSYCGGGFVEEI-DIGPSRAHRDVERD------------ 65

Query: 130 FEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWS 189
                         P F L+EA   F R R+A R+ + ++  R  S   ++         
Sbjct: 66  --------------PTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLI 125

Query: 190 FHGHAP----GSTFSSV----------------SPEGRSSQHAALEALAALSFNEQRDPA 249
           F G AP    G   SSV                +  G       LE L     +      
Sbjct: 126 FGGQAPFRLAGGDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRG 185

Query: 250 PAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWL 309
           P PA +SSI+A+PTIKI Q HL  +DSHCPVCK++FEL SEAK+MPC+HIYH+DCI+PWL
Sbjct: 186 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 245

Query: 310 AQHNTCPVCRHELPQQDGRHGWGGDSSSNNNSSEVSNERGVFLSRYAFPEHSA 342
            QHN+CPVCR ELP +          + + N  E S  R +F + + F   S+
Sbjct: 246 VQHNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSS 270

[Close]

BLAST of Sed0014601 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-42
Identity = 103/293 (35.15%), Postives = 139/293 (47.44%), Query Frame = 0


Query: 70  DTHWCYQCNHSFWLNGDEDIACPYCNGGFIEELNDVHDETVQNDLNPGTDDDLSTQVPPI 129
           +THWC++C  + WL    D  C YC GGF+EE+ D+       D+               
Sbjct: 6   NTHWCHRCQRAVWLRA-RDAVCSYCGGGFVEEI-DIGPSRAHRDVERD------------ 65

Query: 130 FEAMFSLMGRRNPYPRFGLLEALDTFTRERMAGRNPNFDVRRRSSSIPEQNLDFFNSFWS 189
                         P F L+EA   F R R+A R+ + ++  R  S   ++         
Sbjct: 66  --------------PTFDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLI 125

Query: 190 FHGHAP----GSTFSSV----------------SPEGRSSQHAALEALAALSFNEQRDPA 249
           F G AP    G   SSV                +  G       LE L     +      
Sbjct: 126 FGGQAPFRLAGGDNSSVEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRG 185

Query: 250 PAPASRSSIEAMPTIKINQMHL-GTDSHCPVCKEKFELGSEAKEMPCNHIYHTDCILPWL 309
           P PA +SSI+A+PTIKI Q HL  +DSHCPVCK++FEL SEAK+MPC+HIYH+DCI+PWL
Sbjct: 186 PPPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWL 245

Query: 310 AQHNTCPVCRHELPQQDGRHGWGGDSSSNNNSSEVSNERGVFLSRYAFPEHSA 342
            QHN+CPVCR ELP +          + + N  E S  R +F + + F   S+
Sbjct: 246 VQHNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFRSSSS 270

The following BLAST results are available for this feature:

BLAST of Sed0014601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6588139.1	6.3e-146	80.56	E3 ubiquitin-protein ligase RZF1, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023531171.1	1.8e-145	80.25	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022933367.1	1.8e-145	80.25	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022933368.1 ...	[more]
XP_022967835.1	1.2e-144	80.25	probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022967844.1 pr...	[more]
XP_022147727.1	9.7e-139	70.14	probable E3 ubiquitin-protein ligase RHC1A isoform X1 [Momordica charantia]	[more]

BLAST of Sed0014601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	2.3e-42	35.07	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	3.3e-41	35.15	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
O22283	7.5e-33	33.11	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q940T5	3.8e-29	32.82	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9SNB6	1.4e-26	32.79	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]

BLAST of Sed0014601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4J7	8.9e-146	80.25	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111440731...	[more]
A0A6J1HT80	5.7e-145	80.25	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111467227 P...	[more]
A0A6J1D364	4.7e-139	70.14	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101659...	[more]
A0A0A0LZS8	6.4e-136	70.98	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_1G600760 PE...	[more]
A0A6J1D235	2.4e-135	75.16	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101659...	[more]

BLAST of Sed0014601 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40830.2	1.6e-43	35.07	RING-H2 finger C1A	[more]
AT2G40830.1	1.6e-43	35.07	RING-H2 finger C1A	[more]
AT2G40830.3	1.6e-43	35.07	RING-H2 finger C1A	[more]
AT3G56580.2	2.4e-42	35.15	RING/U-box superfamily protein	[more]
AT3G56580.1	2.4e-42	35.15	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 257..297 e-value: 2.5E-7 score: 40.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 256..298 e-value: 1.5E-11 score: 44.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 257..298 score: 12.386007
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 219..304 e-value: 1.1E-21 score: 78.2
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 71..102 e-value: 1.8E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 347..368
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 66..330
None	No IPR available	PANTHER	PTHR15710:SF86	E3 UBIQUITIN-PROTEIN LIGASE RHC1A-RELATED	coord: 66..330
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 257..298 e-value: 8.46236E-24 score: 90.84
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 237..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0014601.1	Sed0014601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0061630	ubiquitin protein ligase activity