Sed0013611 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTTCCAAGTTTCAAAGCCAGTAGGCCCTTTTAAAAAGTGCTGAAAATCTCCTAAAGTTAACAAATAATACGAGTGTGTGATTTTAGTTTTTGTGCAAAAACTTTCTCAAATGGGGTCACAGGTCAAATCTGTGTGTATTTTCTCGTATGAAATCATACAATGACAAACCATTCACGAGCCTCATAGACGTTTCCACGTTTCCACTAATCATTAACTGAAAGAGGTTACCAAGTTAGGAAAAGGATAAGCATAGCCAATATAGATAGATGATACCTCCAATGCAGCTCTCTTATGGAGGAGCTTGAAAACTCGGTAGAAGCGAAGGCTTAACCGAGATGGGTGCGTGCTCGAGCAAAGATGGGAGCGATATTCGTGCCGACGATGTCGGGGGATTGAAAGAGAAGATAAGGTTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGACAAAAGCCCATGAGAAGGAAATGGTGGTTTTTGCATTTAAGGAAGCAAGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAAGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATCACAGAGGTTGAAGAGGGAAATTTTGAATGGGAAATGGAAGAAACTTCAAATATTATCTTTGAGCAGATGCAACAGGAAAGAGCTAGCAGAGATGAAGCCATAGAGAAATGGAAGCAACTTTATCACACCATCAAGATTGAGCTTGATGACCTAATTCAGAGAACACATAATGGTATGTTACTTATCTTTCCTTTGTTCTTCATTAGATATTATGAAATTCCGTCTCAAAATCAATTGGAAATGAGGGGAGTAACTGATTTATCTTAGAGGAGTAGCTTATTAATCTTATAAATACCAGTAGGTCTCCTCACATTTCTAACGTAGGATTTGGATCAGATCCCAATTTCATTTTATTGGACATAATACTTGTTTAGGTTTAATGATCTGTGATACCAAATTAGATATTATGGTATTCCATCTCAAAACCAAACGACAATTAGGAAAGTAACACATCTATCTTATAAATACTAGGTCTCCTCACCTTTCCTGGGCAGAATTCTCAAGTGGCCCTTCAAGATGGTGCTTCTATGCGTTCAACACTCTTGGATAGGATCTCAATTCCACTTTATTAGACCGAATACCCGTTTGGGTTTATTGAGCTATGATACCAAATAAGATATAATGGAGTTTCATCTCAAAACTAATTAGCAGTTAAGAAAATTGTTCATCTATCTTATAAATGGGAAGAGGTCTCCCCACCTTTCCAATGTAGGATCTTTAACCATCTTGAAATTTCTATTGATCGTCTTTCAATTTTATACTTATAACTCAAGATTAGTGAGCATCCGACCTCTTAGTTGACCGCATATGTCTTAACCAGTTAAATTATGCTCCGATTGGCAGCTTAAAATTAAACTACCAGGAAAAACTAACACTATGAATACTCAATAACAGCACATTAGATTTTCAATCACTAACATGCACTCAAAAACTTTCTTTGACAGGAGATGGATTGAATTGGGGAGCAAATGAGAGAACAGAAGCACTACAAACAGAATTGAAAGCAAAGGAGGAGACCATAAAAGCACTTAAAGAACAAGTAGTTTCAATGGAACATGAAAAATACAAGAGGGACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAACCAATAAGAACTTCCCATAAATGTGTCTGAAAGTAGCCTGCCAGTAAAGTAAGAAGCATATAAACATAAGGCCCAACATCATATTGAAATAATGAATAAATATGAAATTCCAATTGAACTAGTTACTAGATGTAAATGTGTCCACCCCCACCCTTCATTTCAACCCAAATGTTATTTTCATAATCATTTTGTTGGCATGGTCCAATAGGTAAACTTTTTTGTTCTTTAGAATGGGATGTTGAGAAAGTTACAAAAATATGAGAAAAAAGTAGATTTATCCTTCCTCAGTTGATAGGTCAATGTGCTTTTTCTTCTCTTCTTTCACTTTTAAGTCTCATTTTCTTTTGAAATTTAGTGATAGTCTTAAGTTTGTGGGACTGTATCCAAC ATTTTTCCAAGTTTCAAAGCCAGTAGGCCCTTTTAAAAAGTGCTGAAAATCTCCTAAAGTTAACAAATAATACGAGTGTGTGATTTTAGTTTTTGTGCAAAAACTTTCTCAAATGGGGTCACAGGTCAAATCTGTGTGTATTTTCTCGTATGAAATCATACAATGACAAACCATTCACGAGCCTCATAGACGTTTCCACGTTTCCACTAATCATTAACTGAAAGAGGTTACCAAGTTAGGAAAAGGATAAGCATAGCCAATATAGATAGATGATACCTCCAATGCAGCTCTCTTATGGAGGAGCTTGAAAACTCGGTAGAAGCGAAGGCTTAACCGAGATGGGTGCGTGCTCGAGCAAAGATGGGAGCGATATTCGTGCCGACGATGTCGGGGGATTGAAAGAGAAGATAAGGTTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGACAAAAGCCCATGAGAAGGAAATGGTGGTTTTTGCATTTAAGGAAGCAAGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAAGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATCACAGAGGTTGAAGAGGGAAATTTTGAATGGGAAATGGAAGAAACTTCAAATATTATCTTTGAGCAGATGCAACAGGAAAGAGCTAGCAGAGATGAAGCCATAGAGAAATGGAAGCAACTTTATCACACCATCAAGATTGAGCTTGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGAATTGGGGAGCAAATGAGAGAACAGAAGCACTACAAACAGAATTGAAAGCAAAGGAGGAGACCATAAAAGCACTTAAAGAACAAGTAGTTTCAATGGAACATGAAAAATACAAGAGGGACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAACCAATAAGAACTTCCCATAAATGTGTCTGAAAGTAGCCTGCCAGTAAAGTAAGAAGCATATAAACATAAGGCCCAACATCATATTGAAATAATGAATAAATATGAAATTCCAATTGAACTAGTTACTAGATGTAAATGTGTCCACCCCCACCCTTCATTTCAACCCAAATGTTATTTTCATAATCATTTTGTTGGCATGGTCCAATAGGTAAACTTTTTTGTTCTTTAGAATGGGATGTTGAGAAAGTTACAAAAATATGAGAAAAAAGTAGATTTATCCTTCCTCAGTTGATAGGTCAATGTGCTTTTTCTTCTCTTCTTTCACTTTTAAGTCTCATTTTCTTTTGAAATTTAGTGATAGTCTTAAGTTTGTGGGACTGTATCCAAC ATGGGTGCGTGCTCGAGCAAAGATGGGAGCGATATTCGTGCCGACGATGTCGGGGGATTGAAAGAGAAGATAAGGTTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGACAAAAGCCCATGAGAAGGAAATGGTGGTTTTTGCATTTAAGGAAGCAAGTTGGAAAACAGAGAAGAAGAAACTCAAAGAGGAAGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATCACAGAGGTTGAAGAGGGAAATTTTGAATGGGAAATGGAAGAAACTTCAAATATTATCTTTGAGCAGATGCAACAGGAAAGAGCTAGCAGAGATGAAGCCATAGAGAAATGGAAGCAACTTTATCACACCATCAAGATTGAGCTTGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGAATTGGGGAGCAAATGAGAGAACAGAAGCACTACAAACAGAATTGAAAGCAAAGGAGGAGACCATAAAAGCACTTAAAGAACAAGTAGTTTCAATGGAACATGAAAAATACAAGAGGGACAGAGAAATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAACCAATAAGAACTTCCCATAAATGTGTCTGA MGACSSKDGSDIRADDVGGLKEKIRLLREEVRGVMSEMDKETKAHEKEMVVFAFKEASWKTEKKKLKEEVKMLRKKVKERITEVEEGNFEWEMEETSNIIFEQMQQERASRDEAIEKWKQLYHTIKIELDDLIQRTHNGDGLNWGANERTEALQTELKAKEETIKALKEQVVSMEHEKYKRDREIDILRQSLRIMTSKKEQPIRTSHKCV Homology
BLAST of Sed0013611 vs. NCBI nr
Match: XP_008464528.1 (PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo] >TYJ98513.1 golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88 Identity = 179/216 (82.87%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of Sed0013611 vs. NCBI nr
Match: XP_023530768.1 (uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.1 bits (858), Expect = 4.3e-88 Identity = 181/216 (83.80%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Sed0013611 vs. NCBI nr
Match: XP_038879675.1 (uncharacterized protein LOC120071454 [Benincasa hispida]) HSP 1 Score: 335.1 bits (858), Expect = 4.3e-88 Identity = 181/216 (83.80%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of Sed0013611 vs. NCBI nr
Match: XP_022931924.1 (uncharacterized protein LOC111438196 [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87 Identity = 180/216 (83.33%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Sed0013611 vs. NCBI nr
Match: KAA0057829.1 (golgin subfamily A member 6-like protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87 Identity = 178/216 (82.41%), Postives = 194/216 (89.81%), Query Frame = 0
BLAST of Sed0013611 vs. ExPASy Swiss-Prot
Match: Q8IIG7 (Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF11_0207 PE=1 SV=2) HSP 1 Score: 47.0 bits (110), Expect = 3.1e-04 Identity = 56/201 (27.86%), Postives = 103/201 (51.24%), Query Frame = 0
BLAST of Sed0013611 vs. ExPASy TrEMBL
Match: A0A5D3BGY2 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001180 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 9.4e-89 Identity = 179/216 (82.87%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of Sed0013611 vs. ExPASy TrEMBL
Match: A0A1S3CLU2 (uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 9.4e-89 Identity = 179/216 (82.87%), Postives = 195/216 (90.28%), Query Frame = 0
BLAST of Sed0013611 vs. ExPASy TrEMBL
Match: A0A6J1EVL0 (uncharacterized protein LOC111438196 OS=Cucurbita moschata OX=3662 GN=LOC111438196 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 6.1e-88 Identity = 180/216 (83.33%), Postives = 189/216 (87.50%), Query Frame = 0
BLAST of Sed0013611 vs. ExPASy TrEMBL
Match: A0A5A7UW79 (Golgin subfamily A member 6-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001160 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 8.0e-88 Identity = 178/216 (82.41%), Postives = 194/216 (89.81%), Query Frame = 0
BLAST of Sed0013611 vs. ExPASy TrEMBL
Match: A0A0A0LS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87 Identity = 179/216 (82.87%), Postives = 191/216 (88.43%), Query Frame = 0
BLAST of Sed0013611 vs. TAIR 10
Match: AT3G23930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). ) HSP 1 Score: 115.9 bits (289), Expect = 3.8e-26 Identity = 92/216 (42.59%), Postives = 125/216 (57.87%), Query Frame = 0
BLAST of Sed0013611 vs. TAIR 10
Match: AT4G13540.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). ) HSP 1 Score: 105.1 bits (261), Expect = 6.8e-23 Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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