Sed0008954 (gene) Chayote v1

Overview
NameSed0008954
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG05: 11975839 .. 11977100 (+)
RNA-Seq ExpressionSed0008954
SyntenySed0008954
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGACGAGTTCACCATGAGACTAAGATTGAATTTGCAGGTAATAATGTTTTCTGGATTCTTTTCAAGAATGTTATTGATAAAAGCAGAGTGTTTAACTTTGGCCCTTGGTTTTTTGATAAAGCTTTAATTGTTCTTTATTGACCAAAGGAGAATGAGAGTCTAGGGGATATTGAATTTAAATCGTGTGTGTTTTGGATTCAAATTCACAATGTCCCAATTTAGAACTTATCCATTGAAACAACGAAGATTTTAGGACAAAGAATCGGCAATGTCGAGGAAATTGATTGGGTTGGTGAGATTGATTGGATAGGACCCGTCCTCCGAATACGAGCTTCTATTAATGTTACAGAACCTCTTCAAAGAGGATTTTTTTTTAAGGAAAATAGGGTTCAAGAACTTGGTGTCCCCTTTATTATGAAACAATTCTTGATTTTTGCTTTGCCTGTGGTATTTTTTGCCATTTGGCCCAATGTTCGGGTGCATCTCATCATTCATCAGAGAGTTTTTCCTTTAACTATGGTAGTTGGTTGAAGGCTACGCATGTGAAGAAAATTGGAGGAGGTTCGGTGGGAAGAATGGGATCCTGAAGCTAAAGGTGGTAGTGAAGGAGTTAAGGAAATTTCGGGTATTGGAGATCGACATAGTTCAGAAGGGCGAAAAGGCAGAAGTGATATTTCTATTTGGCGGTCTTTCGAAGTTAGAGCTAACTCTGATTCTAAAGAAAATAAAGATACAAATAACGATGGCATTAGTAAGGAAATTGTTACTCACCATTCAAAGATGATTCTTAGTAGAGATGATCTGAAAAATGAATCTAAGATTGTTAAGAACATAAAAGATGTCGAAGATTTTTCAGATCCTATTTCTATTTCAAAAAGCCAGGGTCGTTTAGTTCTAATTGAGTTTCCTAATCAGCAACTTTTGTTGTCTAAACATTCATCGAATTGTAAAGGGAAAGAAGCTTTATTCAAGGAGCAATCTGACAATCAATTAGTGACTCCTTTTAATCATCAAGCCATTGAGGTTATGGATGAAGATGTTGCTAAATCAATAAGAAGTAAATGGAGGTTTAAAAGATTGAAGAATGATAGAGTGGCAGATATAGATGACGTGTTTTTGAACAATGAAATTGGAGTTAAACGTAAGAGTGAGGAGGAAGGAAGAAATGAGTCAAATGGGAAAAAGGTTCGAGTGGCTATCGAAGAGGCGTGGTTAAATTTTGTGGCGGTTGATAATCAACCCCACCTAGCATTATGA

mRNA sequence

ATGTTTGACGAGTTCACCATGAGACTAAGATTGAATTTGCAGGAGGTTCGGTGGGAAGAATGGGATCCTGAAGCTAAAGGTGGTAGTGAAGGAGTTAAGGAAATTTCGGGTATTGGAGATCGACATAGTTCAGAAGGGCGAAAAGGCAGAAGTGATATTTCTATTTGGCGGTCTTTCGAAGTTAGAGCTAACTCTGATTCTAAAGAAAATAAAGATACAAATAACGATGGCATTAGTAAGGAAATTGTTACTCACCATTCAAAGATGATTCTTAGTAGAGATGATCTGAAAAATGAATCTAAGATTGTTAAGAACATAAAAGATGTCGAAGATTTTTCAGATCCTATTTCTATTTCAAAAAGCCAGGGTCGTTTAGTTCTAATTGAGTTTCCTAATCAGCAACTTTTGTTGTCTAAACATTCATCGAATTGTAAAGGGAAAGAAGCTTTATTCAAGGAGCAATCTGACAATCAATTAGTGACTCCTTTTAATCATCAAGCCATTGAGGTTATGGATGAAGATGTTGCTAAATCAATAAGAAGTAAATGGAGGTTTAAAAGATTGAAGAATGATAGAGTGGCAGATATAGATGACGTGTTTTTGAACAATGAAATTGGAGTTAAACGTAAGAGTGAGGAGGAAGGAAGAAATGAGTCAAATGGGAAAAAGGTTCGAGTGGCTATCGAAGAGGCGTGGTTAAATTTTGTGGCGGTTGATAATCAACCCCACCTAGCATTATGA

Coding sequence (CDS)

ATGTTTGACGAGTTCACCATGAGACTAAGATTGAATTTGCAGGAGGTTCGGTGGGAAGAATGGGATCCTGAAGCTAAAGGTGGTAGTGAAGGAGTTAAGGAAATTTCGGGTATTGGAGATCGACATAGTTCAGAAGGGCGAAAAGGCAGAAGTGATATTTCTATTTGGCGGTCTTTCGAAGTTAGAGCTAACTCTGATTCTAAAGAAAATAAAGATACAAATAACGATGGCATTAGTAAGGAAATTGTTACTCACCATTCAAAGATGATTCTTAGTAGAGATGATCTGAAAAATGAATCTAAGATTGTTAAGAACATAAAAGATGTCGAAGATTTTTCAGATCCTATTTCTATTTCAAAAAGCCAGGGTCGTTTAGTTCTAATTGAGTTTCCTAATCAGCAACTTTTGTTGTCTAAACATTCATCGAATTGTAAAGGGAAAGAAGCTTTATTCAAGGAGCAATCTGACAATCAATTAGTGACTCCTTTTAATCATCAAGCCATTGAGGTTATGGATGAAGATGTTGCTAAATCAATAAGAAGTAAATGGAGGTTTAAAAGATTGAAGAATGATAGAGTGGCAGATATAGATGACGTGTTTTTGAACAATGAAATTGGAGTTAAACGTAAGAGTGAGGAGGAAGGAAGAAATGAGTCAAATGGGAAAAAGGTTCGAGTGGCTATCGAAGAGGCGTGGTTAAATTTTGTGGCGGTTGATAATCAACCCCACCTAGCATTATGA

Protein sequence

MFDEFTMRLRLNLQEVRWEEWDPEAKGGSEGVKEISGIGDRHSSEGRKGRSDISIWRSFEVRANSDSKENKDTNNDGISKEIVTHHSKMILSRDDLKNESKIVKNIKDVEDFSDPISISKSQGRLVLIEFPNQQLLLSKHSSNCKGKEALFKEQSDNQLVTPFNHQAIEVMDEDVAKSIRSKWRFKRLKNDRVADIDDVFLNNEIGVKRKSEEEGRNESNGKKVRVAIEEAWLNFVAVDNQPHLAL
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008954.1Sed0008954.1mRNA