Sed0008086 (gene) Chayote v1

Overview
NameSed0008086
Typegene
OrganismSechium edule (Chayote v1)
DescriptionF-box domain-containing protein
LocationLG12: 31728835 .. 31729959 (-)
RNA-Seq ExpressionSed0008086
SyntenySed0008086
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTTATAATTCTTCAGCCGTTTGTTCTTTGAGCTGCCATGAACTCCCAGTCGATGTTCTTCATCTTATTTTGAACAAATTATCCACATTTTCCGATCAAATTAGTTTCCAATTCGTGTGTAGACATTGGTACTACGTAGCTCAACAACAAAAACCTCAAAAACTCCCTTTCCTTTTAATACCCAAGAATTTTCCAAACCAACCATGTTTATACGATCTCAATACTCAAGCATATGTCCCAAACACAACCCTTCATTGGAACCACAACATTATCCCACAACGTTTCTGTGGATCTTCCTTTGGTTGGTTGGCTTTCACCGACAAATCCAACCTCTATTTCATCAATCCCTTCCTCTCCCAAACCCTAACCCTCCCACTCCCTCCCGGCACCGCCCTCGCCCCCAATGTTCCCCCCGACCGCACCGTTCTCAAAGCTATATTCTCCAAAAACCCCACATTGTTCCCGAACGATTACGCCGTCGTTGCCATTCATTACAAATCCTTGAAGTTATCCTACTTCAAACACGGTGCACCCGGGTGGGTTGAAATACTACACCAAGACATCCTCCGCCCTTTCGCGGATGTCATCATGTCCAAAGGACGCGTGTACGCAGTTAGCCACTTTGGAGGACTTGGGGTTTTTGATATCGACAAAGAAGAATTGCACGTCGTCGTTCCCAACGGGGACGAGATGGGGTATGTTCATGCAGCTCACCTCGTAGAGTCGTCCCGAGGCAAGTTATTGCAAGTTCGGAGATTTATGTCTTTTTTGTCTACGACTTATCAATTTGATGTGTTTGTTCTTGAGGAATTAGGTGGTGGAAAGATGATGAGATGGATTAGGGTGAAGAGTTTAGGAGAAGATGCATTGTTTTTGGGGGTTAATGATTCAATATCAATTAATTTAGCTTCTAACAATAATAATAATAATAATAATAATTGTGAACCTAATTGCATATATTACACAGATAGCTATCACAGACGAAGCCAAGAATCATGCAAACAAAAATCAAAAATAGATATGGGACTCTACAAGTTGGGTTCAAACTTCTTCAGTGATCGGTTTAAAGATTTACGAGATGAATACTTGCCACCTCCCATTTGGATTCAACCTTTTTAA

mRNA sequence

ATGTCTTCTTATAATTCTTCAGCCGTTTGTTCTTTGAGCTGCCATGAACTCCCAGTCGATGTTCTTCATCTTATTTTGAACAAATTATCCACATTTTCCGATCAAATTAGTTTCCAATTCGTGTGTAGACATTGGTACTACGTAGCTCAACAACAAAAACCTCAAAAACTCCCTTTCCTTTTAATACCCAAGAATTTTCCAAACCAACCATGTTTATACGATCTCAATACTCAAGCATATGTCCCAAACACAACCCTTCATTGGAACCACAACATTATCCCACAACGTTTCTGTGGATCTTCCTTTGGTTGGTTGGCTTTCACCGACAAATCCAACCTCTATTTCATCAATCCCTTCCTCTCCCAAACCCTAACCCTCCCACTCCCTCCCGGCACCGCCCTCGCCCCCAATGTTCCCCCCGACCGCACCGTTCTCAAAGCTATATTCTCCAAAAACCCCACATTGTTCCCGAACGATTACGCCGTCGTTGCCATTCATTACAAATCCTTGAAGTTATCCTACTTCAAACACGGTGCACCCGGGTGGGTTGAAATACTACACCAAGACATCCTCCGCCCTTTCGCGGATGTCATCATGTCCAAAGGACGCGTGTACGCAGTTAGCCACTTTGGAGGACTTGGGGTTTTTGATATCGACAAAGAAGAATTGCACGTCGTCGTTCCCAACGGGGACGAGATGGGGTATGTTCATGCAGCTCACCTCGTAGAGTCGTCCCGAGGCAAGTTATTGCAAGTTCGGAGATTTATGTCTTTTTTGTCTACGACTTATCAATTTGATGTGTTTGTTCTTGAGGAATTAGGTGGTGGAAAGATGATGAGATGGATTAGGGTGAAGAGTTTAGGAGAAGATGCATTGTTTTTGGGGGTTAATGATTCAATATCAATTAATTTAGCTTCTAACAATAATAATAATAATAATAATAATTGTGAACCTAATTGCATATATTACACAGATAGCTATCACAGACGAAGCCAAGAATCATGCAAACAAAAATCAAAAATAGATATGGGACTCTACAAGTTGGGTTCAAACTTCTTCAGTGATCGGTTTAAAGATTTACGAGATGAATACTTGCCACCTCCCATTTGGATTCAACCTTTTTAA

Coding sequence (CDS)

ATGTCTTCTTATAATTCTTCAGCCGTTTGTTCTTTGAGCTGCCATGAACTCCCAGTCGATGTTCTTCATCTTATTTTGAACAAATTATCCACATTTTCCGATCAAATTAGTTTCCAATTCGTGTGTAGACATTGGTACTACGTAGCTCAACAACAAAAACCTCAAAAACTCCCTTTCCTTTTAATACCCAAGAATTTTCCAAACCAACCATGTTTATACGATCTCAATACTCAAGCATATGTCCCAAACACAACCCTTCATTGGAACCACAACATTATCCCACAACGTTTCTGTGGATCTTCCTTTGGTTGGTTGGCTTTCACCGACAAATCCAACCTCTATTTCATCAATCCCTTCCTCTCCCAAACCCTAACCCTCCCACTCCCTCCCGGCACCGCCCTCGCCCCCAATGTTCCCCCCGACCGCACCGTTCTCAAAGCTATATTCTCCAAAAACCCCACATTGTTCCCGAACGATTACGCCGTCGTTGCCATTCATTACAAATCCTTGAAGTTATCCTACTTCAAACACGGTGCACCCGGGTGGGTTGAAATACTACACCAAGACATCCTCCGCCCTTTCGCGGATGTCATCATGTCCAAAGGACGCGTGTACGCAGTTAGCCACTTTGGAGGACTTGGGGTTTTTGATATCGACAAAGAAGAATTGCACGTCGTCGTTCCCAACGGGGACGAGATGGGGTATGTTCATGCAGCTCACCTCGTAGAGTCGTCCCGAGGCAAGTTATTGCAAGTTCGGAGATTTATGTCTTTTTTGTCTACGACTTATCAATTTGATGTGTTTGTTCTTGAGGAATTAGGTGGTGGAAAGATGATGAGATGGATTAGGGTGAAGAGTTTAGGAGAAGATGCATTGTTTTTGGGGGTTAATGATTCAATATCAATTAATTTAGCTTCTAACAATAATAATAATAATAATAATAATTGTGAACCTAATTGCATATATTACACAGATAGCTATCACAGACGAAGCCAAGAATCATGCAAACAAAAATCAAAAATAGATATGGGACTCTACAAGTTGGGTTCAAACTTCTTCAGTGATCGGTTTAAAGATTTACGAGATGAATACTTGCCACCTCCCATTTGGATTCAACCTTTTTAA

Protein sequence

MSSYNSSAVCSLSCHELPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKPQKLPFLLIPKNFPNQPCLYDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAFTDKSNLYFINPFLSQTLTLPLPPGTALAPNVPPDRTVLKAIFSKNPTLFPNDYAVVAIHYKSLKLSYFKHGAPGWVEILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELHVVVPNGDEMGYVHAAHLVESSRGKLLQVRRFMSFLSTTYQFDVFVLEELGGGKMMRWIRVKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCKQKSKIDMGLYKLGSNFFSDRFKDLRDEYLPPPIWIQPF
Homology
BLAST of Sed0008086 vs. NCBI nr
Match: KAE8100779.1 (hypothetical protein FH972_018639 [Carpinus fangiana])

HSP 1 Score: 163.3 bits (412), Expect = 4.0e-36
Identity = 123/370 (33.24%), Postives = 188/370 (50.81%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKPQ--KLPFLLIPK--NFPNQPCL 76
           LP D+LH +L+KL++  D++ F  VC+ W    +++  Q  ++P LL+P   N      L
Sbjct: 14  LPTDLLHCVLHKLASPIDKVRFAAVCKSWGTQVKERPRQGTQIPMLLVPNKHNIYKARSL 73

Query: 77  YDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAF-TDKSNLYFINPFLSQTLTLPLPPG 136
           Y +  Q  + +  L   +N   +R CGSSFGWL+F T+ S++   NPF ++ + LP    
Sbjct: 74  YSITDQT-ISDVNLPVPYN--SRRCCGSSFGWLSFVTNTSSITLFNPFRNKKIRLPKLQK 133

Query: 137 TALAPNVPPDRTVLKAIFSKNP-TLFPNDYAVVAIHYKSLKLSYFKHGAPGWVEILHQDI 196
                 +    TV K   S +P TL  +   VVAI+ +   L++ K G   W ++   D+
Sbjct: 134 LRGYTTIGKQYTVEKVTLSSDPTTLEDSGCLVVAIYGEFNHLAFLKLGDESWTDV-DYDL 193

Query: 197 LRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELHVVVPNGDEMGYVHAAHLVESSRGKLL 256
                D++  KG+V A+ H G L   D++      +     E  Y    +LVE+S G LL
Sbjct: 194 QLVLGDILYYKGQVLAIDHRGELLSIDVNTNIKKTLASRDFE--YAPRTYLVETSVGDLL 253

Query: 257 QVRRFMSF-------LSTTYQFDVFVLE-ELGGGKMMRWIRVKSLGEDALFLGVNDSISI 316
            VRRF +           T  F+V+ L  +   G++++W+ VK++G+DALFLG N SIS+
Sbjct: 254 LVRRFFTSWPFGVDNQGMTGHFEVYKLVLDKESGRVVKWVEVKNIGDDALFLGNNYSISV 313

Query: 317 NLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCKQKSKIDMGLYKLGSNFFSDRFK-DLR 372
            LAS       + C PN IYYTD Y     E       IDMG++ L        +K +  
Sbjct: 314 -LAS-----AFSGCHPNSIYYTDDY--IDTEPYYPNGPIDMGIFNLEDRSVRLHYKPNPS 369

BLAST of Sed0008086 vs. NCBI nr
Match: XP_008364231.2 (F-box protein At2g26160-like isoform X1 [Malus domestica] >XP_017185755.2 F-box protein At2g26160-like isoform X1 [Malus domestica] >XP_028958770.1 F-box protein At2g26160-like isoform X1 [Malus domestica] >XP_028958771.1 F-box protein At2g26160-like isoform X1 [Malus domestica] >RXH98713.1 hypothetical protein DVH24_011038 [Malus domestica])

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-34
Identity = 132/405 (32.59%), Postives = 190/405 (46.91%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQK-------PQKLPFLLIPK--NFP 76
           LP D+LHLI+ KL   SD I F  VC+HW  VA  QK        Q+LP L+IP   N  
Sbjct: 16  LPSDLLHLIVEKLIPTSDYIRFGAVCKHWQSVALLQKQRRLKSHQQQLPMLIIPSKDNIN 75

Query: 77  NQPCLYDL------NTQAYVPNTTLHWNHNIIPQRFCGSSFGWLA-FTDKSNLYFINPFL 136
           ++  LY +        + YVP             R CGSS GWLA   D   +   NPF+
Sbjct: 76  DRRGLYSVMHGKNCGFELYVPYN----------NRCCGSSHGWLACVNDNFGVNLFNPFI 135

Query: 137 SQTLTLPLPPGTALAPNVPP-----DRTVLKAIFSKNPTLFPNDYAVVAI-HYKSLKLSY 196
            +T+   LPP T +  ++       D  + K + S +P+L PNDY VVA+      ++++
Sbjct: 136 KRTIL--LPPVTKVPQDIRKHAYRRDHYIKKVVLSADPSLCPNDYEVVALFDCNGTRIAH 195

Query: 197 FKHGAPGWVEI---------LHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELH- 256
            K G   W  I         LHQ I   F DV+  +G+  A S  GG+   +I  +  H 
Sbjct: 196 IKSGDNAWTHIDQTIRYFYGLHQII--GFDDVLYYRGQFLAASREGGVFSINISNDSTHK 255

Query: 257 -------VVVPNGDEMGYVHAAHLVESSRGKLLQVRRFMSF-----LSTTYQFDVFVLEE 316
                   +VP+ D+  Y     LVESS+G LL VR+F S          + F VF L  
Sbjct: 256 PHVSIVLPIVPSIDDKAY-----LVESSQGDLLLVRKFQSLNYSECFIENFSFKVFKLFS 315

Query: 317 LGGGKM-MRWI-RVKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRR 374
             GG+    WI  ++S+G+DA F+G N SI ++       ++   C+PN IY+     R 
Sbjct: 316 ASGGRTGPEWIEEIESIGDDAFFMGDNQSICVSA------SDFPGCQPNSIYFCID-DRV 375

BLAST of Sed0008086 vs. NCBI nr
Match: XP_008234257.1 (PREDICTED: F-box protein At2g26160-like [Prunus mume])

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-34
Identity = 126/403 (31.27%), Postives = 196/403 (48.64%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKPQK-------LPFLLIP--KNFP 76
           LP ++L LIL KL   SD I F  VC+HW  VA  +K Q+       +P L+IP   N  
Sbjct: 14  LPSNILDLILEKLIPISDYIRFSAVCKHWQSVALYRKKQRIKSCHKQIPMLIIPTIDNSS 73

Query: 77  NQPCLYDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAFTDKSNLY-FINPFLSQTLTL 136
            +  LY + TQ    +  L+  ++   +RFCGSS GWLA  D++ +   +NPF   T++L
Sbjct: 74  ERRGLYSV-TQGKTCSFELNVYYS---KRFCGSSHGWLACVDENLVVTLLNPFTGCTISL 133

Query: 137 PLPPGTALAPNVP--PDRTVLKAIFSKNPTLFPNDYAVVAIH-YKSLKLSYFKHGAPGWV 196
           P  P +     V    D  + K + S +P+  PNDY V+ I+     ++++FK G   W 
Sbjct: 134 PPVPKSTWRSTVAYRCDYYINKVVLSADPSFLPNDYEVLVIYDGYGKQIAHFKSGDDAWT 193

Query: 197 EILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEEL---HVVVPNGDEMGYVHAAH 256
            I   D +  F DVI  KG+  AVS  G +   ++ +++    HV +    + G  +  +
Sbjct: 194 SI---DQMIGFDDVIYYKGQFLAVSLGGSVFSMNVSRDQTTKPHVSLLVPMDPGTDNKTY 253

Query: 257 LVESSRGKLLQVR---------RFMSFLSTT-YQFDVFVLEELGG--------------- 316
           LV+SS+G LL VR         RFM  L+   ++F+    E++ G               
Sbjct: 254 LVQSSKGDLLLVRKFKRVNYCKRFMKSLNLKFFKFERLNFEQVNGYDRFTETLSFKVFKL 313

Query: 317 ----GKMMRWIRVKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRS 374
               G+  +W+ ++S+G +ALFLG N S+ ++            C+PN IY+TD      
Sbjct: 314 FCAHGERPQWVEIESIGNEALFLGTNQSMCVSAL------EFPGCQPNSIYFTDDC--VD 373

BLAST of Sed0008086 vs. NCBI nr
Match: KAB2634531.1 (F-box protein [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 157.5 bits (397), Expect = 2.2e-34
Identity = 131/399 (32.83%), Postives = 190/399 (47.62%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQK-------PQKLPFLLIPK--NFP 76
           LP D+L+LI+ KL   SD I F  VC+HW  VA  QK        Q+LP L+IP   N  
Sbjct: 28  LPSDLLYLIVEKLIPTSDYIRFGAVCKHWQSVALLQKQRRLKSRQQQLPMLIIPSKDNIN 87

Query: 77  NQPCLYDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLA-FTDKSNLYFINPFLSQTLTL 136
           ++  LY + T        L+  +N    R CGSS GWLA   D   +   NPF   T+  
Sbjct: 88  DRRGLYSV-THGKNCGFELYVPYN---NRCCGSSHGWLACVNDNFGVNLFNPFTKHTIL- 147

Query: 137 PLPPGTALAPNVPP-----DRTVLKAIFSKNPTLFPNDYAVVAI-HYKSLKLSYFKHGAP 196
            LPP T +  ++       D  + K + S +P+LFPNDY VVA+      ++++ K G  
Sbjct: 148 -LPPLTEVPQDIRKHAYRRDHYIKKVVLSADPSLFPNDYEVVALFDCHGTRMAHIKSGDN 207

Query: 197 GWVEI---------LHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELH------- 256
            W  I         LHQ I   F DV+  +G+  AVS  GG+   ++     H       
Sbjct: 208 AWTHIDQTIRYFYGLHQII--GFDDVLYYRGQFLAVSREGGVFSINVSNGSTHKPHVSIV 267

Query: 257 -VVVPNGDEMGYVHAAHLVESSRGKLLQVRRFMSF-----LSTTYQFDVFVLEELGGGKM 316
             +VP+ D+  Y     LVESS+G LL VR+F S          + F VF L    GG+ 
Sbjct: 268 LPIVPSIDDKAY-----LVESSQGDLLLVRKFQSLNYNECFIENFSFKVFNLFSASGGRT 327

Query: 317 -MRWIR-VKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCK 374
              WI+ ++S+G+DA F+G N S+ ++       +N   C+PN IY+            +
Sbjct: 328 GPEWIQEIESIGDDAFFIGDNQSMCVSA------SNFPGCQPNSIYFCID----DWVGVE 387

BLAST of Sed0008086 vs. NCBI nr
Match: GFS32129.1 (calcium-dependent lipid-binding (CaLB domain) family protein [Actinidia rufa])

HSP 1 Score: 157.1 bits (396), Expect = 2.9e-34
Identity = 120/376 (31.91%), Postives = 179/376 (47.61%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKP-------------QKLPFLLI- 76
           L  ++L  I  KL  FSD I F  VC +W  VA +                 KLP L+I 
Sbjct: 11  LSQNLLASIEEKLGQFSDFIRFIAVCGNWRLVALENNSSHKHRLNILKACHNKLPMLMIE 70

Query: 77  -PKNFPNQPCLYDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAFTDKSNLY-FINPFL 136
             +N P +  L+ + T+       L    N    RF  SS GWL   DK+ +   +NPF 
Sbjct: 71  TKENHPEKRVLFSV-TEGITYEVQLPLPCN---NRFFSSSVGWLFTIDKTIIITLLNPFT 130

Query: 137 SQTLTLPLPPGTALA----PNVPPDRTVLKAIFSKNPTLFPNDYAVVAIHYKSLKLSYFK 196
           +  +TLP+     +      +  PD  V+K I S +P L PN+Y VV I+    +L++F+
Sbjct: 131 NGVVTLPVLYDPLMEFLVWLDTQPDYFVVKGILSSDPLLNPNNYEVVVIYRGMRRLAFFR 190

Query: 197 HGAPGWVEILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELHVVVPNGDEMGYV 256
            G   W   ++ +    F D+I  KG+V+ V  +G L   ++     +  V  G +    
Sbjct: 191 SGNDSW-SFINLEQYYVFVDIIYHKGQVFGVDSWGKLVRIEVASGGTNYRVMIGRDNYCA 250

Query: 257 HAAHLVESSRGKLLQVRRFMSFLSTTYQFDVF-VLEELGGGKMMRWIRVKSLGEDALFLG 316
             A+LVES  G LL V+RF      TY+F+VF ++  +G      W  VK++G+ ALFLG
Sbjct: 251 QVAYLVESQEGDLLMVQRFWK-NRKTYEFEVFKLVYRIGEAHEAVWAHVKNIGDQALFLG 310

Query: 317 VNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCKQKSKIDMGLYKL-GSNFFS 371
            N S+S+      +      C+PNCIYYTD  H R+          D G++ L   +F S
Sbjct: 311 DNHSVSV------STMEFPGCQPNCIYYTDQNHNRNPPYAYHGVDDDSGVFNLENGSFHS 370

BLAST of Sed0008086 vs. ExPASy Swiss-Prot
Match: Q3EBZ2 (F-box protein SKIP23 OS=Arabidopsis thaliana OX=3702 GN=SKIP23 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.9e-04
Identity = 89/411 (21.65%), Postives = 158/411 (38.44%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKPQKLPFL-LIPKN----FPNQPC 76
           LP D+L LI   L +  D I F+ VC  W   A+ + P     L ++P N    FP+   
Sbjct: 7   LPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILPDNGGSLFPDSAV 66

Query: 77  LYDLNTQAYVPNTTLHWNHNIIPQRFC--GSSFGWLAFTDKSNLYFINPFLSQTLTLPL- 136
            + L+ ++ +          I P   C    SFGWL   ++     +N     TL  PL 
Sbjct: 67  GFRLSQRSIL---------LIKPHEPCIESDSFGWLIKVEED----LNVPRKVTLLDPLC 126

Query: 137 PPGTALAPNVP-----------------------PDRTVLKAIFSKNPTL----FPNDYA 196
               ++  N P                           ++++++ +   +       DY 
Sbjct: 127 DTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDGDYK 186

Query: 197 VVAIH-YKSLKLSYFKHGAPGWVEILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDK 256
            V +  + S KL+ F+     W  I   D+  P+ DV++  GR +AV + G   V D   
Sbjct: 187 FVLLTIHVSGKLAVFRSWDRAWTVI--NDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSS 246

Query: 257 EELHVV---VPNGDEMGYVHAAHLVESSRGKLLQVRRFMS---------FLSTTYQFDVF 316
            +L +V   V  GD+        L+ES  G++L V  ++S         F+   ++   F
Sbjct: 247 LKLTLVASPVFGGDK------KFLIESC-GEMLLVDMYLSLEAVEGDPGFVEEIFEHPAF 306

Query: 317 VL-EELGGGKMMR-------WIRVKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNC 372
            + E     K+ R       W+ V  L +  LFLG + + S +      ++    C+ + 
Sbjct: 307 YMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASA-----SDILPLCDGSS 366

BLAST of Sed0008086 vs. ExPASy TrEMBL
Match: A0A5N6RR59 (DUF295 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_018639 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-36
Identity = 123/370 (33.24%), Postives = 188/370 (50.81%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKPQ--KLPFLLIPK--NFPNQPCL 76
           LP D+LH +L+KL++  D++ F  VC+ W    +++  Q  ++P LL+P   N      L
Sbjct: 14  LPTDLLHCVLHKLASPIDKVRFAAVCKSWGTQVKERPRQGTQIPMLLVPNKHNIYKARSL 73

Query: 77  YDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAF-TDKSNLYFINPFLSQTLTLPLPPG 136
           Y +  Q  + +  L   +N   +R CGSSFGWL+F T+ S++   NPF ++ + LP    
Sbjct: 74  YSITDQT-ISDVNLPVPYN--SRRCCGSSFGWLSFVTNTSSITLFNPFRNKKIRLPKLQK 133

Query: 137 TALAPNVPPDRTVLKAIFSKNP-TLFPNDYAVVAIHYKSLKLSYFKHGAPGWVEILHQDI 196
                 +    TV K   S +P TL  +   VVAI+ +   L++ K G   W ++   D+
Sbjct: 134 LRGYTTIGKQYTVEKVTLSSDPTTLEDSGCLVVAIYGEFNHLAFLKLGDESWTDV-DYDL 193

Query: 197 LRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELHVVVPNGDEMGYVHAAHLVESSRGKLL 256
                D++  KG+V A+ H G L   D++      +     E  Y    +LVE+S G LL
Sbjct: 194 QLVLGDILYYKGQVLAIDHRGELLSIDVNTNIKKTLASRDFE--YAPRTYLVETSVGDLL 253

Query: 257 QVRRFMSF-------LSTTYQFDVFVLE-ELGGGKMMRWIRVKSLGEDALFLGVNDSISI 316
            VRRF +           T  F+V+ L  +   G++++W+ VK++G+DALFLG N SIS+
Sbjct: 254 LVRRFFTSWPFGVDNQGMTGHFEVYKLVLDKESGRVVKWVEVKNIGDDALFLGNNYSISV 313

Query: 317 NLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCKQKSKIDMGLYKLGSNFFSDRFK-DLR 372
            LAS       + C PN IYYTD Y     E       IDMG++ L        +K +  
Sbjct: 314 -LAS-----AFSGCHPNSIYYTDDY--IDTEPYYPNGPIDMGIFNLEDRSVRLHYKPNPS 369

BLAST of Sed0008086 vs. ExPASy TrEMBL
Match: A0A2N9FBD4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11976 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-35
Identity = 130/393 (33.08%), Postives = 191/393 (48.60%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYV------AQQQKPQKLPFLLIP--KNFPN 76
           LPV +L  IL+KL    D + F  VC+ W+ V      A+Q+  + LP L+IP  K    
Sbjct: 12  LPVPILCSILHKLPEPIDHLWFGAVCKQWHSVSKDCIQAKQRWNKLLPMLMIPTEKYTTT 71

Query: 77  QPCLYDL------NTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAFTDK-SNLYFINPFLS 136
           +  LY +      N +  VPN           +RFCGS  GWLA  D+ S +  +NPF  
Sbjct: 72  ERRLYSVAEGKIYNVELRVPNC----------ERFCGSCLGWLATVDETSYVTLLNPF-K 131

Query: 137 QTLTLPLPPGTALAPNVPP-DRTVLKAIFSKNPTLFPNDYAVVAIHYKSLKLSYFKHGAP 196
             +T+ LPP   L P     D  +   I S +P   PNDY VVAI+    KL++ K G  
Sbjct: 132 NGITIRLPPIDPLEPYYEGFDYYIYNFILSADPDSAPNDYVVVAIYDLYKKLAFIKAGDK 191

Query: 197 GWVEILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDK--------EELHVVVPNGDE 256
            W  +  + I    +D+I   G VYAVSH G +  F++++         +  ++ P  + 
Sbjct: 192 SWRHLNRESIPDMISDIIFYNGLVYAVSHRGLIVCFNVEEGNSIESELPKARILAPKMNP 251

Query: 257 MGYVHAAHLVESSRGKLLQVRRFMS-----FLSTTYQFDVFVLE-ELGGGKMMRWIRVKS 316
             Y   A+LVESS G LL V R +       L  T  F V+ L  +   GK+M  + ++S
Sbjct: 252 PTYSDRAYLVESSGGDLLYVHRKLDKNEDYRLQITNHFKVYKLRLDEQSGKVMERVELES 311

Query: 317 LGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCKQKSKI----D 374
           LG+D LF+G N+S+S++ A      N   C+PN IY+T  Y       C   ++     D
Sbjct: 312 LGDDTLFVGDNNSMSVSAA------NFPGCQPNSIYFTHDY-----IDCTGFNEFYRPHD 371

BLAST of Sed0008086 vs. ExPASy TrEMBL
Match: A0A498JXM0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011038 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.2e-35
Identity = 132/405 (32.59%), Postives = 190/405 (46.91%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQK-------PQKLPFLLIPK--NFP 76
           LP D+LHLI+ KL   SD I F  VC+HW  VA  QK        Q+LP L+IP   N  
Sbjct: 16  LPSDLLHLIVEKLIPTSDYIRFGAVCKHWQSVALLQKQRRLKSHQQQLPMLIIPSKDNIN 75

Query: 77  NQPCLYDL------NTQAYVPNTTLHWNHNIIPQRFCGSSFGWLA-FTDKSNLYFINPFL 136
           ++  LY +        + YVP             R CGSS GWLA   D   +   NPF+
Sbjct: 76  DRRGLYSVMHGKNCGFELYVPYN----------NRCCGSSHGWLACVNDNFGVNLFNPFI 135

Query: 137 SQTLTLPLPPGTALAPNVPP-----DRTVLKAIFSKNPTLFPNDYAVVAI-HYKSLKLSY 196
            +T+   LPP T +  ++       D  + K + S +P+L PNDY VVA+      ++++
Sbjct: 136 KRTIL--LPPVTKVPQDIRKHAYRRDHYIKKVVLSADPSLCPNDYEVVALFDCNGTRIAH 195

Query: 197 FKHGAPGWVEI---------LHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELH- 256
            K G   W  I         LHQ I   F DV+  +G+  A S  GG+   +I  +  H 
Sbjct: 196 IKSGDNAWTHIDQTIRYFYGLHQII--GFDDVLYYRGQFLAASREGGVFSINISNDSTHK 255

Query: 257 -------VVVPNGDEMGYVHAAHLVESSRGKLLQVRRFMSF-----LSTTYQFDVFVLEE 316
                   +VP+ D+  Y     LVESS+G LL VR+F S          + F VF L  
Sbjct: 256 PHVSIVLPIVPSIDDKAY-----LVESSQGDLLLVRKFQSLNYSECFIENFSFKVFKLFS 315

Query: 317 LGGGKM-MRWI-RVKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRR 374
             GG+    WI  ++S+G+DA F+G N SI ++       ++   C+PN IY+     R 
Sbjct: 316 ASGGRTGPEWIEEIESIGDDAFFMGDNQSICVSA------SDFPGCQPNSIYFCID-DRV 375

BLAST of Sed0008086 vs. ExPASy TrEMBL
Match: A0A5N5I7N3 (F-box protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039982 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-34
Identity = 131/399 (32.83%), Postives = 190/399 (47.62%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQK-------PQKLPFLLIPK--NFP 76
           LP D+L+LI+ KL   SD I F  VC+HW  VA  QK        Q+LP L+IP   N  
Sbjct: 28  LPSDLLYLIVEKLIPTSDYIRFGAVCKHWQSVALLQKQRRLKSRQQQLPMLIIPSKDNIN 87

Query: 77  NQPCLYDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLA-FTDKSNLYFINPFLSQTLTL 136
           ++  LY + T        L+  +N    R CGSS GWLA   D   +   NPF   T+  
Sbjct: 88  DRRGLYSV-THGKNCGFELYVPYN---NRCCGSSHGWLACVNDNFGVNLFNPFTKHTIL- 147

Query: 137 PLPPGTALAPNVPP-----DRTVLKAIFSKNPTLFPNDYAVVAI-HYKSLKLSYFKHGAP 196
            LPP T +  ++       D  + K + S +P+LFPNDY VVA+      ++++ K G  
Sbjct: 148 -LPPLTEVPQDIRKHAYRRDHYIKKVVLSADPSLFPNDYEVVALFDCHGTRMAHIKSGDN 207

Query: 197 GWVEI---------LHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELH------- 256
            W  I         LHQ I   F DV+  +G+  AVS  GG+   ++     H       
Sbjct: 208 AWTHIDQTIRYFYGLHQII--GFDDVLYYRGQFLAVSREGGVFSINVSNGSTHKPHVSIV 267

Query: 257 -VVVPNGDEMGYVHAAHLVESSRGKLLQVRRFMSF-----LSTTYQFDVFVLEELGGGKM 316
             +VP+ D+  Y     LVESS+G LL VR+F S          + F VF L    GG+ 
Sbjct: 268 LPIVPSIDDKAY-----LVESSQGDLLLVRKFQSLNYNECFIENFSFKVFNLFSASGGRT 327

Query: 317 -MRWIR-VKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCK 374
              WI+ ++S+G+DA F+G N S+ ++       +N   C+PN IY+            +
Sbjct: 328 GPEWIQEIESIGDDAFFIGDNQSMCVSA------SNFPGCQPNSIYFCID----DWVGVE 387

BLAST of Sed0008086 vs. ExPASy TrEMBL
Match: A0A7J0DC68 (Calcium-dependent lipid-binding (CaLB domain) family protein OS=Actinidia rufa OX=165716 GN=Acr_00g0020960 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-34
Identity = 120/376 (31.91%), Postives = 179/376 (47.61%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKP-------------QKLPFLLI- 76
           L  ++L  I  KL  FSD I F  VC +W  VA +                 KLP L+I 
Sbjct: 11  LSQNLLASIEEKLGQFSDFIRFIAVCGNWRLVALENNSSHKHRLNILKACHNKLPMLMIE 70

Query: 77  -PKNFPNQPCLYDLNTQAYVPNTTLHWNHNIIPQRFCGSSFGWLAFTDKSNLY-FINPFL 136
             +N P +  L+ + T+       L    N    RF  SS GWL   DK+ +   +NPF 
Sbjct: 71  TKENHPEKRVLFSV-TEGITYEVQLPLPCN---NRFFSSSVGWLFTIDKTIIITLLNPFT 130

Query: 137 SQTLTLPLPPGTALA----PNVPPDRTVLKAIFSKNPTLFPNDYAVVAIHYKSLKLSYFK 196
           +  +TLP+     +      +  PD  V+K I S +P L PN+Y VV I+    +L++F+
Sbjct: 131 NGVVTLPVLYDPLMEFLVWLDTQPDYFVVKGILSSDPLLNPNNYEVVVIYRGMRRLAFFR 190

Query: 197 HGAPGWVEILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDKEELHVVVPNGDEMGYV 256
            G   W   ++ +    F D+I  KG+V+ V  +G L   ++     +  V  G +    
Sbjct: 191 SGNDSW-SFINLEQYYVFVDIIYHKGQVFGVDSWGKLVRIEVASGGTNYRVMIGRDNYCA 250

Query: 257 HAAHLVESSRGKLLQVRRFMSFLSTTYQFDVF-VLEELGGGKMMRWIRVKSLGEDALFLG 316
             A+LVES  G LL V+RF      TY+F+VF ++  +G      W  VK++G+ ALFLG
Sbjct: 251 QVAYLVESQEGDLLMVQRFWK-NRKTYEFEVFKLVYRIGEAHEAVWAHVKNIGDQALFLG 310

Query: 317 VNDSISINLASNNNNNNNNNCEPNCIYYTDSYHRRSQESCKQKSKIDMGLYKL-GSNFFS 371
            N S+S+      +      C+PNCIYYTD  H R+          D G++ L   +F S
Sbjct: 311 DNHSVSV------STMEFPGCQPNCIYYTDQNHNRNPPYAYHGVDDDSGVFNLENGSFHS 370

BLAST of Sed0008086 vs. TAIR 10
Match: AT2G17030.1 (F-box family protein with a domain of unknown function (DUF295) )

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-05
Identity = 89/411 (21.65%), Postives = 158/411 (38.44%), Query Frame = 0

Query: 17  LPVDVLHLILNKLSTFSDQISFQFVCRHWYYVAQQQKPQKLPFL-LIPKN----FPNQPC 76
           LP D+L LI   L +  D I F+ VC  W   A+ + P     L ++P N    FP+   
Sbjct: 7   LPKDLLDLISKSLESSFDLIQFRSVCSSWRSAAEPKSPLPTHHLPILPDNGGSLFPDSAV 66

Query: 77  LYDLNTQAYVPNTTLHWNHNIIPQRFC--GSSFGWLAFTDKSNLYFINPFLSQTLTLPL- 136
            + L+ ++ +          I P   C    SFGWL   ++     +N     TL  PL 
Sbjct: 67  GFRLSQRSIL---------LIKPHEPCIESDSFGWLIKVEED----LNVPRKVTLLDPLC 126

Query: 137 PPGTALAPNVP-----------------------PDRTVLKAIFSKNPTL----FPNDYA 196
               ++  N P                           ++++++ +   +       DY 
Sbjct: 127 DTRNSIPENFPRVLDMSKFKVRELGREFKLHYFNTVGDIVESLYLEKAVVKYLDCDGDYK 186

Query: 197 VVAIH-YKSLKLSYFKHGAPGWVEILHQDILRPFADVIMSKGRVYAVSHFGGLGVFDIDK 256
            V +  + S KL+ F+     W  I   D+  P+ DV++  GR +AV + G   V D   
Sbjct: 187 FVLLTIHVSGKLAVFRSWDRAWTVI--NDMPSPYDDVMLFDGRFFAVDNNGRTVVVDYSS 246

Query: 257 EELHVV---VPNGDEMGYVHAAHLVESSRGKLLQVRRFMS---------FLSTTYQFDVF 316
            +L +V   V  GD+        L+ES  G++L V  ++S         F+   ++   F
Sbjct: 247 LKLTLVASPVFGGDK------KFLIESC-GEMLLVDMYLSLEAVEGDPGFVEEIFEHPAF 306

Query: 317 VL-EELGGGKMMR-------WIRVKSLGEDALFLGVNDSISINLASNNNNNNNNNCEPNC 372
            + E     K+ R       W+ V  L +  LFLG + + S +      ++    C+ + 
Sbjct: 307 YMNERTVKFKVYRFVEREESWVDVYDLEDKMLFLGDDSTFSASA-----SDILPLCDGSS 366

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8100779.14.0e-3633.24hypothetical protein FH972_018639 [Carpinus fangiana][more]
XP_008364231.21.3e-3432.59F-box protein At2g26160-like isoform X1 [Malus domestica] >XP_017185755.2 F-box ... [more]
XP_008234257.11.3e-3431.27PREDICTED: F-box protein At2g26160-like [Prunus mume][more]
KAB2634531.12.2e-3432.83F-box protein [Pyrus ussuriensis x Pyrus communis][more]
GFS32129.12.9e-3431.91calcium-dependent lipid-binding (CaLB domain) family protein [Actinidia rufa][more]
Match NameE-valueIdentityDescription
Q3EBZ21.9e-0421.65F-box protein SKIP23 OS=Arabidopsis thaliana OX=3702 GN=SKIP23 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A5N6RR591.9e-3633.24DUF295 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_018639 ... [more]
A0A2N9FBD41.3e-3533.08Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11976 PE=4 SV=1[more]
A0A498JXM06.2e-3532.59Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011038 PE=4 SV=1[more]
A0A5N5I7N31.1e-3432.83F-box protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039982 P... [more]
A0A7J0DC681.4e-3431.91Calcium-dependent lipid-binding (CaLB domain) family protein OS=Actinidia rufa O... [more]
Match NameE-valueIdentityDescription
AT2G17030.11.3e-0521.65F-box family protein with a domain of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 17..57
e-value: 0.0013
score: 28.1
IPR001810F-box domainPFAMPF12937F-box-likecoord: 16..50
e-value: 4.0E-6
score: 26.6
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 283..347
e-value: 3.0E-10
score: 39.6
NoneNo IPR availableGENE3D1.20.1280.50coord: 8..55
e-value: 4.0E-5
score: 25.4
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 15..373
NoneNo IPR availablePANTHERPTHR44259:SF67F-BOX PROTEIN SKIP23-LIKEcoord: 15..373
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 5..71

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0008086.1Sed0008086.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding