Sed0003787 (gene) Chayote v1

Overview
NameSed0003787
Typegene
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR13-like
LocationLG05: 12049656 .. 12050358 (+)
RNA-Seq ExpressionSed0003787
SyntenySed0003787
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCTCTTTCTCTCTCTCTCCTCTTTCTCTCTCTAGGGTTTTGTGGGTTTCTGAAGTTCGATCCTTTTCTTTCAATGGGTATCTTCCAAAATTCCCTTAAACCCTTCTCCTTTTAAACCAAATCCCTTACAGAGCTTCACTCTTTGCACAACCCCTGTTCCTTTACCTTTAAAAGGCTTCTAATTTGTTTTCAAACCTTGTTGTTGCCTGTTGCCTGTTCTTGTTTTGTCCTATTTGGCCCTTTTCAGTCGAATTTCTCCACCTCTAAATCTACCCTTTTTAGCAAATTCCTCCAAAATGGCCCCTTCAGCAGCAAAAATGGCCACAAGAACCAGAAGAAATTTACCCGCCTTGAAGCTGAAAAAGAAAATAAAGAAGACGACGGCCGCCAAGAAACAGAAGCAGATTCCGGCGACGCAATGCCACGCCGTTCAATTTTCCACCGCCGACGACGACGGCGGCGGCTGCAGCACTCCGAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTCCGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGACTGCTGGTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGGTGCTCTGCCTGACATTTCAGTTTGAATTTAAAACGCTAATCAAACCTGGTGTGTTTATACAAATTTCACAAACATTTTTTTCCCTC

mRNA sequence

TCCCTCTTTCTCTCTCTCTCCTCTTTCTCTCTCTAGGGTTTTGTGGGTTTCTGAAGTTCGATCCTTTTCTTTCAATGGGTATCTTCCAAAATTCCCTTAAACCCTTCTCCTTTTAAACCAAATCCCTTACAGAGCTTCACTCTTTGCACAACCCCTGTTCCTTTACCTTTAAAAGGCTTCTAATTTGTTTTCAAACCTTGTTGTTGCCTGTTGCCTGTTCTTGTTTTGTCCTATTTGGCCCTTTTCAGTCGAATTTCTCCACCTCTAAATCTACCCTTTTTAGCAAATTCCTCCAAAATGGCCCCTTCAGCAGCAAAAATGGCCACAAGAACCAGAAGAAATTTACCCGCCTTGAAGCTGAAAAAGAAAATAAAGAAGACGACGGCCGCCAAGAAACAGAAGCAGATTCCGGCGACGCAATGCCACGCCGTTCAATTTTCCACCGCCGACGACGACGGCGGCGGCTGCAGCACTCCGAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTCCGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGACTGCTGGTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGGTGCTCTGCCTGACATTTCAGTTTGAATTTAAAACGCTAATCAAACCTGGTGTGTTTATACAAATTTCACAAACATTTTTTTCCCTC

Coding sequence (CDS)

ATGGCCCCTTCAGCAGCAAAAATGGCCACAAGAACCAGAAGAAATTTACCCGCCTTGAAGCTGAAAAAGAAAATAAAGAAGACGACGGCCGCCAAGAAACAGAAGCAGATTCCGGCGACGCAATGCCACGCCGTTCAATTTTCCACCGCCGACGACGACGGCGGCGGCTGCAGCACTCCGAAAGCAGAGAGATTCAGAATCCCGGAGATTCTGACATGTCCGCCGGCGCCGAAGAAGCAAAGAGCCGTTTCCGACTGCTGGTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCAGAATTAGAGCTCTTCTTCTTCGGTGCTCTGCCTGACATTTCAGTTTGA

Protein sequence

MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV
Homology
[Close]
BLAST of Sed0003787 vs. NCBI nr
Match: XP_022958378.1 (cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita moschata])

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35
Identity = 86/114 (75.44%), Postives = 89/114 (78.07%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTP 60
           MAPS AKMATR RRN+   K+ KKIKKTT  K Q QIP  Q   VQF   DD GGG STP
Sbjct: 1   MAPSGAKMATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPD-DDGGGGYSTP 60

Query: 61  KAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV 115
           KAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPELELFFF A PDISV
Sbjct: 61  KAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDISV 113

[Close]
BLAST of Sed0003787 vs. NCBI nr
Match: KAG7035865.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 4.3e-34
Identity = 87/121 (71.90%), Postives = 90/121 (74.38%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADDD---- 60
           MAPS  KMATR RRN+   KL KKIKKTT  K Q+   QIP  Q   VQF   DDD    
Sbjct: 1   MAPSGGKMATRPRRNIRTSKLNKKIKKTTTKKPQQPQNQIPPPQNDVVQFPDDDDDGGGG 60

Query: 61  GGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDIS 115
           GGG STPKAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPELELFFF A PDIS
Sbjct: 61  GGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDIS 120

[Close]
BLAST of Sed0003787 vs. NCBI nr
Match: KAG6605917.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33
Identity = 86/118 (72.88%), Postives = 89/118 (75.42%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADD-DGGG 60
           MAPS  KMATR RRN+   KL KKIKKTT  K Q+   QIP  Q   VQF   DD  GGG
Sbjct: 1   MAPSGGKMATRPRRNIRTSKLNKKIKKTTTKKPQQPQNQIPPPQNDVVQFPDDDDGGGGG 60

Query: 61  CSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV 115
            STPKAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPELELFFF A PDISV
Sbjct: 61  YSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDISV 118

[Close]
BLAST of Sed0003787 vs. NCBI nr
Match: XP_038902266.1 (cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida])

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32
Identity = 85/111 (76.58%), Postives = 89/111 (80.18%), Query Frame = 0 

Query: 8   MATRTRRNLPALKLKKKIKKTTAAKKQKQIPAT-QCHAVQFS-TADDDGGGCSTPKAERF 67
           MATRTRRNLP LKL KKIKKT   ++Q QIPAT Q   VQF+    D  GGCSTPKAER 
Sbjct: 1   MATRTRRNLPNLKLTKKIKKTKKQQQQNQIPATVQNDIVQFTDECSDTDGGCSTPKAERH 60

Query: 68  RIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL--PDISV 115
           RIPEILTCPPAPKK RAVSDC FRRSPIAFFAPPELELFFF +L  PDISV
Sbjct: 61  RIPEILTCPPAPKKPRAVSDCSFRRSPIAFFAPPELELFFFVSLPVPDISV 111

[Close]
BLAST of Sed0003787 vs. NCBI nr
Match: XP_023532997.1 (cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-32
Identity = 82/110 (74.55%), Postives = 85/110 (77.27%), Query Frame = 0 

Query: 8   MATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFSTADDDGGGCSTPKAER 67
           MATR RRN+   KL KKIKKTT  K Q+   QIP  Q   VQF   DDDGGG STPKAER
Sbjct: 1   MATRPRRNIRTSKLNKKIKKTTTKKPQQPQNQIPPPQNDVVQF--PDDDGGGYSTPKAER 60

Query: 68  FRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV 115
           FRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPELELFFF A PDISV
Sbjct: 61  FRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDISV 108

[Close]
BLAST of Sed0003787 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.0e-14
Identity = 48/110 (43.64%), Postives = 60/110 (54.55%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK--QIPATQCHAVQFSTADDDGGGCS 60
           MA   A+   R  + L     KK++ +           +P+    AV  S      GGC 
Sbjct: 1   MASKKARKPNRAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVLTSP-----GGCC 60

Query: 61  TPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGA 109
           TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAPPE+ELFF  A
Sbjct: 61  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFFVNA 105

[Close]
BLAST of Sed0003787 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.5e-13
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 56  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL 110
           GC TP  E+ RIPE+LTCPPAPKKQ+   +C  RR  IAFFAPP++ELFF  AL
Sbjct: 59  GCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]
BLAST of Sed0003787 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.9e-04
Identity = 28/91 (30.77%), Postives = 43/91 (47.25%), Query Frame = 0 

Query: 23  KKIKKTTAAKK--------QKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCP 82
           +K  +TT  KK           +      +   S  +D+    +TP A+  RIP ++ CP
Sbjct: 13  RKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCP 72

Query: 83  PAPKKQRAVSDCWFRRSPIAFFAPPELELFF 106
           PAPKK++      +   P  FF+PP+LE  F
Sbjct: 73  PAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]
BLAST of Sed0003787 vs. ExPASy TrEMBL
Match: A0A6J1H2X7 (cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=3662 GN=LOC111459621 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.5e-36
Identity = 86/114 (75.44%), Postives = 89/114 (78.07%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQKQIPATQCHAVQFSTADDDGGGCSTP 60
           MAPS AKMATR RRN+   K+ KKIKKTT  K Q QIP  Q   VQF   DD GGG STP
Sbjct: 1   MAPSGAKMATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPPQNDVVQFPD-DDGGGGYSTP 60

Query: 61  KAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV 115
           KAERFRIPEILTCPP PKKQR +SDC FRRSPIAFFAPPELELFFF A PDISV
Sbjct: 61  KAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDISV 113

[Close]
BLAST of Sed0003787 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.7e-31
Identity = 82/115 (71.30%), Postives = 90/115 (78.26%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK-QIPATQCHAVQFSTADDDGGGCST 60
           MAPS  +MA RTR N  +LKL KK+KKT   ++QK   PAT+   VQ S  DD  GGCST
Sbjct: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQKLPAPATENDVVQCSN-DDIDGGCST 60

Query: 61  PKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV 115
           P+AERFRIPEI+TCPPAPKKQR VSDC FRRSPIAFFAPPELELFFF ALPDI V
Sbjct: 61  PRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV 113

[Close]
BLAST of Sed0003787 vs. ExPASy TrEMBL
Match: A0A0A0L0Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.8e-31
Identity = 87/122 (71.31%), Postives = 91/122 (74.59%), Query Frame = 0 

Query: 1   MAPSAAKMATR-TRRNLPALKLKKKIKKTTAAKKQKQ-----IPATQCHAVQFSTADDDG 60
           MAPS A+MATR TRR LP LKL KKIKKTT  K+  Q     +P TQ   V+F     D 
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSD- 60

Query: 61  GGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL--PDI 115
           GGCSTPKAER RIPEILTCPPAPKK RAVSDC  RRSPIAFFAPPELELFFF AL  PDI
Sbjct: 61  GGCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALPVPDI 120

[Close]
BLAST of Sed0003787 vs. ExPASy TrEMBL
Match: A0A6J1K7R4 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 GN=LOC111491400 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.9e-31
Identity = 81/114 (71.05%), Postives = 85/114 (74.56%), Query Frame = 0 

Query: 8   MATRTRRNLPALKLKKKIKKTTAAKKQK---QIPATQCHAVQFS----TADDDGGGCSTP 67
           MATR RRN+P  KL KK+KKTT  K Q+   QIP  Q   VQF       DD GGG STP
Sbjct: 1   MATRPRRNIPNSKLNKKMKKTTTKKPQQPQNQIPPPQNDVVQFPDDDFDNDDVGGGYSTP 60

Query: 68  KAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGALPDISV 115
           KAERFRIPEILTCPP PKKQR VSDC FRRSPIAFFAPPELELFFF + PDISV
Sbjct: 61  KAERFRIPEILTCPPGPKKQRPVSDCSFRRSPIAFFAPPELELFFFISRPDISV 114

[Close]
BLAST of Sed0003787 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 5.4e-30
Identity = 84/122 (68.85%), Postives = 88/122 (72.13%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQ-----KQIPAT-QCHAVQFS-TADDD 60
           MAPS  KMATRTR NLP LKL KKIKKT   ++Q     KQIPA     AV F+    D 
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPAVIPNDAVHFTDDCSDI 60

Query: 61  GGGCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFG-ALPDI 115
            GGCSTPKAERFRIPEILTCPPAPKK R  SDC  RRSPIAFFAPPELELFF    +PDI
Sbjct: 61  DGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPDI 120

[Close]
BLAST of Sed0003787 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 2.8e-15
Identity = 48/110 (43.64%), Postives = 60/110 (54.55%), Query Frame = 0 

Query: 1   MAPSAAKMATRTRRNLPALKLKKKIKKTTAAKKQK--QIPATQCHAVQFSTADDDGGGCS 60
           MA   A+   R  + L     KK++ +           +P+    AV  S      GGC 
Sbjct: 1   MASKKARKPNRAEKKLTRSCFKKQVPQHNNINTNTIYSVPSPSPAAVLTSP-----GGCC 60

Query: 61  TPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGA 109
           TPKA++ RIPE+LTCPPAPKKQR   +C  RR  I FFAPPE+ELFF  A
Sbjct: 61  TPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFFVNA 105

[Close]
BLAST of Sed0003787 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 5.3e-14
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0 

Query: 56  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIAFFAPPELELFFFGAL 110
           GC TP  E+ RIPE+LTCPPAPKKQ+   +C  RR  IAFFAPP++ELFF  AL
Sbjct: 59  GCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]
BLAST of Sed0003787 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.5e-05
Identity = 28/91 (30.77%), Postives = 43/91 (47.25%), Query Frame = 0 

Query: 23  KKIKKTTAAKK--------QKQIPATQCHAVQFSTADDDGGGCSTPKAERFRIPEILTCP 82
           +K  +TT  KK           +      +   S  +D+    +TP A+  RIP ++ CP
Sbjct: 13  RKFSETTEGKKCVITGISLHSTVKPISLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCP 72

Query: 83  PAPKKQRAVSDCWFRRSPIAFFAPPELELFF 106
           PAPKK++      +   P  FF+PP+LE  F
Sbjct: 73  PAPKKRKLTLKVSY--GPREFFSPPDLETVF 101

[Close]
BLAST of Sed0003787 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 7.7e-05
Identity = 24/51 (47.06%), Postives = 32/51 (62.75%), Query Frame = 0 

Query: 58  STPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSPIA--FFAPP-ELELFF 106
           +TP A+  +IPE+L CPPAP+K+R    C   RS +   FF PP +LE  F
Sbjct: 61  TTPTAKETKIPELLECPPAPRKRRPALKC---RSNVVREFFTPPSDLETVF 108

[Close]
BLAST of Sed0003787 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0 

Query: 56  GCSTPKAERFRIPEILTCPPAPKKQRAVSDCWFRRSP--IAFFAPPELELFFF 107
           GC+TP++  +RIP    CPP P+K+  V     +R P    +F PP+LE  F+
Sbjct: 14  GCTTPRSTMYRIPVASVCPPPPRKKLMVVR---KRDPPRNGYFQPPDLETLFY 63

The following BLAST results are available for this feature:
BLAST of Sed0003787 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022958378.11.8e-3575.44cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita moschata][more]
KAG7035865.14.3e-3471.90Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
KAG6605917.11.3e-3372.88Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
XP_038902266.11.8e-3276.58cyclin-dependent protein kinase inhibitor SMR13 [Benincasa hispida][more]
XP_023532997.13.1e-3274.55cyclin-dependent protein kinase inhibitor SMR13-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Sed0003787 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
F4IWB34.0e-1443.64Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ... [more]
Q3ECS57.5e-1364.81Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G... [more]
Q1G3Y44.9e-0430.77Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Sed0003787 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H2X78.5e-3675.44cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=36... [more]
A0A6J1D3Z61.7e-3171.30cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3... [more]
A0A0A0L0Q12.8e-3171.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1[more]
A0A6J1K7R44.9e-3171.05cyclin-dependent protein kinase inhibitor SMR9-like OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1JET45.4e-3068.85cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Sed0003787 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20898.12.8e-1543.64unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G51355.15.3e-1464.81unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G60783.13.5e-0530.77unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G40460.17.7e-0547.06unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G02220.11.0e-0439.62unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33142:SF8CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 17..109
IPR040389Cyclin-dependent protein kinase inhibitor SMRPANTHERPTHR33142CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 17..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0003787.1Sed0003787.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0005634 nucleus