Sed0000452 (gene) Chayote v1

Overview


Name	Sed0000452
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type E3 ubiquitin transferase
Location	LG05: 9965314 .. 9968114 (-)
RNA-Seq Expression	Sed0000452
Synteny	Sed0000452

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGATGCAACTTTTATTTCCAACTCCTAAACGCACTTTTCTGTTGTACAAGCAAACAATGATTCTTCTATCCAATTATGGCTGCCATGCTGTAAATTTTCATTCTAATATGGATAAGTATTTAAAAGAGCCTTGAAGATTCTTCCTCATAGTTTCTATTTCCATCAGGTTCTGTCCTAATCCTGCTATTATAAGATATACCTTGCTTTCATGGTGTATTTATGGTAGCATTCTATTTGGTTAGGTATGTAAGAACCATATGCATTATAGATTAATTGTTCTTGATATGTATTTCCAGAGATTTATGTCTTGAATCTTCTTTTTATTCTTACAATTTGCATTGCACATTTGAAAATAAATGTCACTCCACACATTGCTCGATTTGATCTTCCTACAAAATTGATTGGTTCCCGAAACCAGTTTTGTAACTCTTTTGAGATGCTGAATAACATAGTTTCAATCTGGCAATCACACTTCTTGTTTATCTCTCAGAGATGATTGCATGAATACGGTTGGATTCAAAGAGTAAGGGATGTATCAGCTGCAGAAGTCCAGGGAAGAACATACAACTTCTGAAGCCAGCTTTTGCAAAGAAGTGACTGAGTTGCGCCTTGCGTCGATAGATTCTCAAGCAGCAACGTCTCGTGCAGAAATCAAAGGTGCCTCTTTTAGGAAAGCTTCGATGGGTGGTTTTGACAGGAATCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGGTTGTTCTAATTGTGATGAGCTTCAAAACTTACAATGCTTGCCCATAAATTATTCAGGAAAAACACTGCCCTTGATAAATCCATCCAATGAGGAAAGCATGTAATTTGAGACCCTGTTGAGAAAATGGAAGGCTACTTTGTTTAATCATTGTATTGAATTGTGGTTGAGTTATTAAATTTTAGGAAACACTAATGAAAACCAGCTAATATAGTTTTATGTTTCAGTGTTCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGTTAGGGTTCAAAACTGCTGTCCTACATGCCGCCATGAACTCGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCGCTCGAGCTCCCTTGCGTATATGAAAACCAAGGTTGCATTGAAATGTTTCCATACAACAGCAAGCTTAAACATGAGAAGAACTGTAAATACCGCTCGTTCAAGTGCCCTTATGCTGGAGGTGAATGTTCTGTAACTGGTGACATTCCCTACCTTGTCATGCATCTCAAGGACGATCACGAGGTCGATATGCACGATGGATATTCCTTTAGCCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCTACATGGATGCTTACTGTAAGATCTCTTTTTGTCTATCTGTGTATGGATGGAGTTCTTTGGAAGACAATGCAACGTCCTCTGATTTCCATTCATTCCAATGCAGGTTTTTAACTGCTTTGGAAGGCAATTCTGCTTGCACTTTGAAGCATTTCGCTTAGGAACAGCACCTGTTTACATGGCGTTCCTACGGTTCATGGGTGACGATGATGATGCAAAGCAGTTTTCTTATAGTCTAGAAGTTGGTGGAAATGGCAGAAAGCTCATATGGCAAGGTATACCGAGAAGTATCCGCGATAGCCATCAGAAGGTTCGGGACAGTCACGATGGATTGATCATTCAGAGGAAGATGGCACAATTCTGCTCTGGAAATGAGGAGCAGGAACTCAAGCTAAAGGTTACAGGGCGGATATGGAGAGTGAAGTGAGAGCAAATATATATTCTCAAAGTCAGTTGTACAATATGCGACTGTAATTGGCTGCTACAATTCAGCTATGTTAGAAGTAGATATTACATCCCC

mRNA sequence

AGTGATGCAACTTTTATTTCCAACTCCTAAACGCACTTTTCTGTTGTACAAGCAAACAATGATTCTTCTATCCAATTATGGCTGCCATGCTGTAAATTTTCATTCTAATATGGATAAGTATTTAAAAGAGCCTTGAAGATTCTTCCTCATAGTTTCTATTTCCATCAGGTTCTGTCCTAATCCTGCTATTATAAGATATACCTTGCTTTCATGGTGTATTTATGGTAGCATTCTATTTGGTTAGAGATGATTGCATGAATACGGTTGGATTCAAAGAGTAAGGGATGTATCAGCTGCAGAAGTCCAGGGAAGAACATACAACTTCTGAAGCCAGCTTTTGCAAAGAAGTGACTGAGTTGCGCCTTGCGTCGATAGATTCTCAAGCAGCAACGTCTCGTGCAGAAATCAAAGGTGCCTCTTTTAGGAAAGCTTCGATGGGTGGTTTTGACAGGAATCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTTCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGTTAGGGTTCAAAACTGCTGTCCTACATGCCGCCATGAACTCGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCGCTCGAGCTCCCTTGCGTATATGAAAACCAAGGTTGCATTGAAATGTTTCCATACAACAGCAAGCTTAAACATGAGAAGAACTGTAAATACCGCTCGTTCAAGTGCCCTTATGCTGGAGGTGAATGTTCTGTAACTGGTGACATTCCCTACCTTGTCATGCATCTCAAGGACGATCACGAGGTCGATATGCACGATGGATATTCCTTTAGCCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCTACATGGATGCTTACTGTTTTTAACTGCTTTGGAAGGCAATTCTGCTTGCACTTTGAAGCATTTCGCTTAGGAACAGCACCTGTTTACATGGCGTTCCTACGGTTCATGGGTGACGATGATGATGCAAAGCAGTTTTCTTATAGTCTAGAAGTTGGTGGAAATGGCAGAAAGCTCATATGGCAAGGTATACCGAGAAGTATCCGCGATAGCCATCAGAAGGTTCGGGACAGTCACGATGGATTGATCATTCAGAGGAAGATGGCACAATTCTGCTCTGGAAATGAGGAGCAGGAACTCAAGCTAAAGGTTACAGGGCGGATATGGAGAGTGAAGTGAGAGCAAATATATATTCTCAAAGTCAGTTGTACAATATGCGACTGTAATTGGCTGCTACAATTCAGCTATGTTAGAAGTAGATATTACATCCCC

Coding sequence (CDS)

ATGTATCAGCTGCAGAAGTCCAGGGAAGAACATACAACTTCTGAAGCCAGCTTTTGCAAAGAAGTGACTGAGTTGCGCCTTGCGTCGATAGATTCTCAAGCAGCAACGTCTCGTGCAGAAATCAAAGGTGCCTCTTTTAGGAAAGCTTCGATGGGTGGTTTTGACAGGAATCGTAATGATGTACACGAGCTACTTGATTGTACTGTTTGCATGAATTTAATGCATCCTCCAATTTACCAGTGTTCAAATGGCCACACTCTTTGTTCAAGCTGCAAGGTTAGGGTTCAAAACTGCTGTCCTACATGCCGCCATGAACTCGGGAACATAAGGTGCCTAGCACTGGAAAAGGTGGCCGAGTCGCTCGAGCTCCCTTGCGTATATGAAAACCAAGGTTGCATTGAAATGTTTCCATACAACAGCAAGCTTAAACATGAGAAGAACTGTAAATACCGCTCGTTCAAGTGCCCTTATGCTGGAGGTGAATGTTCTGTAACTGGTGACATTCCCTACCTTGTCATGCATCTCAAGGACGATCACGAGGTCGATATGCACGATGGATATTCCTTTAGCCATAGATATGTCAAATCCAATCCCCAAGAAGTTGAAAATGCTACATGGATGCTTACTGTTTTTAACTGCTTTGGAAGGCAATTCTGCTTGCACTTTGAAGCATTTCGCTTAGGAACAGCACCTGTTTACATGGCGTTCCTACGGTTCATGGGTGACGATGATGATGCAAAGCAGTTTTCTTATAGTCTAGAAGTTGGTGGAAATGGCAGAAAGCTCATATGGCAAGGTATACCGAGAAGTATCCGCGATAGCCATCAGAAGGTTCGGGACAGTCACGATGGATTGATCATTCAGAGGAAGATGGCACAATTCTGCTCTGGAAATGAGGAGCAGGAACTCAAGCTAAAGGTTACAGGGCGGATATGGAGAGTGAAGTGA

Protein sequence

MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRNDVHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAESLELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHEVDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEEQELKLKVTGRIWRVK

Homology

[Close]

BLAST of Sed0000452 vs. NCBI nr
Match: XP_038900383.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 609.0 bits (1569), Expect = 2.3e-170
Identity = 285/314 (90.76%), Postives = 294/314 (93.63%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH  S ASFCKEVTELRL SIDSQAATSR E KG +FRKAS GGF R+RND
Sbjct: 23  MYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRND 82

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK R+QNCCPTCRHELGNIRCLALEKVAES
Sbjct: 83  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAES 142

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIPYLVMHLKDDHE
Sbjct: 143 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHE 202

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 203 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 262

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 263 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 322

Query: 301 QELKLKVTGRIWRV 315
            ELKLKVTGRIWRV
Sbjct: 323 MELKLKVTGRIWRV 336

[Close]

BLAST of Sed0000452 vs. NCBI nr
Match: XP_038900384.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X3 [Benincasa hispida] >XP_038900386.1 E3 ubiquitin-protein ligase SINAT2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 609.0 bits (1569), Expect = 2.3e-170
Identity = 285/314 (90.76%), Postives = 294/314 (93.63%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH  S ASFCKEVTELRL SIDSQAATSR E KG +FRKAS GGF R+RND
Sbjct: 11  MYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRND 70

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK R+QNCCPTCRHELGNIRCLALEKVAES
Sbjct: 71  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAES 130

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIPYLVMHLKDDHE
Sbjct: 131 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHE 190

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 191 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 250

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 251 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 310

Query: 301 QELKLKVTGRIWRV 315
            ELKLKVTGRIWRV
Sbjct: 311 MELKLKVTGRIWRV 324

[Close]

BLAST of Sed0000452 vs. NCBI nr
Match: XP_038900385.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X4 [Benincasa hispida])

HSP 1 Score: 609.0 bits (1569), Expect = 2.3e-170
Identity = 285/314 (90.76%), Postives = 294/314 (93.63%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH  S ASFCKEVTELRL SIDSQAATSR E KG +FRKAS GGF R+RND
Sbjct: 1   MYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRND 60

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK R+QNCCPTCRHELGNIRCLALEKVAES
Sbjct: 61  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAES 120

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIPYLVMHLKDDHE
Sbjct: 121 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHE 180

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 181 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 300

Query: 301 QELKLKVTGRIWRV 315
            ELKLKVTGRIWRV
Sbjct: 301 MELKLKVTGRIWRV 314

[Close]

BLAST of Sed0000452 vs. NCBI nr
Match: XP_038900382.1 (E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Benincasa hispida])

HSP 1 Score: 609.0 bits (1569), Expect = 2.3e-170
Identity = 285/314 (90.76%), Postives = 294/314 (93.63%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH  S ASFCKEVTELRL SIDSQAATSR E KG +FRKAS GGF R+RND
Sbjct: 23  MYQQQKSREEHAFSAASFCKEVTELRLTSIDSQAATSRPEFKGITFRKASTGGFARSRND 82

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK R+QNCCPTCRHELGNIRCLALEKVAES
Sbjct: 83  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARIQNCCPTCRHELGNIRCLALEKVAES 142

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIPYLVMHLKDDHE
Sbjct: 143 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECRVTGDIPYLVMHLKDDHE 202

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 203 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 262

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 263 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 322

Query: 301 QELKLKVTGRIWRV 315
            ELKLKVTGRIWRV
Sbjct: 323 MELKLKVTGRIWRV 336

[Close]

BLAST of Sed0000452 vs. NCBI nr
Match: XP_008449780.1 (PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Cucumis melo])

HSP 1 Score: 600.9 bits (1548), Expect = 6.3e-168
Identity = 281/315 (89.21%), Postives = 293/315 (93.02%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH +S ASFCKEVTEL L SIDSQ ATSR E KG +FRKAS GGF R+RND
Sbjct: 12  MYQQQKSREEHASSAASFCKEVTELHLTSIDSQPATSRPEFKGVTFRKASTGGFARSRND 71

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK RVQNCCPTCRHELGNIRCLALEKVAES
Sbjct: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIP LVMHLKDDHE
Sbjct: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDD++AKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 252 GDDNEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311

Query: 301 QELKLKVTGRIWRVK 316
            ELKLKVTGRIWRV+
Sbjct: 312 MELKLKVTGRIWRVR 326

[Close]

BLAST of Sed0000452 vs. ExPASy Swiss-Prot
Match: Q9M2P4 (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 4.8e-126
Identity = 208/301 (69.10%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 17  SFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDR----NRNDVHELLDCTVCMN 76
           S  KEV E     +D +  T++ E+      K    G  +    + N V+ELL+C VC N
Sbjct: 6   SALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTN 65

Query: 77  LMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAESLELPCVYENQGC 136
           LM+PPI+QC NGHTLCS+CK+RVQN CPTCR+ELGNIRCLALEKVAESLE+PC Y+N GC
Sbjct: 66  LMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGC 125

Query: 137 IEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHEVDMHDGYSFSHR 196
            ++FPY SKLKHE++C++R + CPYAG ECSVTGDIP LV+HLKDDH+VDMHDG +F+HR
Sbjct: 126 HDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHR 185

Query: 197 YVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYS 256
           YVKSNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD+++AK+FSYS
Sbjct: 186 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYS 245

Query: 257 LEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEEQELKLKVTGRIW 314
           LEVG +GRKL WQGIPRSIRDSH+KVRDS DGLII R +A + SG + QELKL+VTGRIW
Sbjct: 246 LEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIW 305

[Close]

BLAST of Sed0000452 vs. ExPASy Swiss-Prot
Match: P93748 (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=SINAT1 PE=1 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 2.0e-124
Identity = 208/299 (69.57%), Postives = 247/299 (82.61%), Query Frame = 0


Query: 17  SFCKEVTELRLASIDSQAATSRAEI--KGASFRKASMGGFDRNRNDVHELLDCTVCMNLM 76
           S  KE  E     +D +   ++ E   K       S+G F  + N V+ELL+C VC NLM
Sbjct: 6   SALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKF-HSSNGVYELLECPVCTNLM 65

Query: 77  HPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAESLELPCVYENQGCIE 136
           +PPI+QC NGHTLCSSCK+RVQN CPTCR+ELGNIRCLALEKVAESLE+PC Y+N GC +
Sbjct: 66  YPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQD 125

Query: 137 MFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHEVDMHDGYSFSHRYV 196
           +FPY SKLKHE++C++RS+ CPYAG ECSVTGDIP LV HLKDDH+VDMHDG +F+HRYV
Sbjct: 126 IFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYV 185

Query: 197 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLE 256
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD+++AK+FSYSLE
Sbjct: 186 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLE 245

Query: 257 VGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEEQELKLKVTGRIWR 314
           VG + RKL WQGIPRSIRDSH+KVRDS DGLII R +A + SG++++ELKL+VTGRIW+
Sbjct: 246 VGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWK 303

[Close]

BLAST of Sed0000452 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.9e-120
Identity = 192/255 (75.29%), Postives = 222/255 (87.06%), Query Frame = 0


Query: 59  NDVHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVA 118
           + V ELL+C VC++ M+PPI+QCSNGHTLCS CK RV N CPTCRHELGNIRCLALEKVA
Sbjct: 45  SSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVA 104

Query: 119 ESLELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDD 178
            SLELPC Y+N GC+ ++PY  KLKHE  C+YR + CPYAG EC+V GDIPYLV HLKDD
Sbjct: 105 ASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSECTVAGDIPYLVNHLKDD 164

Query: 179 HEVDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLR 238
           H+VDMH+G +F+HRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAF+LG APVY+AFLR
Sbjct: 165 HKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLR 224

Query: 239 FMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGN 298
           FMGDD +AK +SYSLEVGG GRK+IWQG+PRSIRDSH+KVRDS+DGLIIQR MA F SG 
Sbjct: 225 FMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGG 284

Query: 299 EEQELKLKVTGRIWR 314
           E +ELKL+VTGRIW+
Sbjct: 285 ERKELKLRVTGRIWK 299

[Close]

BLAST of Sed0000452 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.7e-118
Identity = 191/265 (72.08%), Postives = 223/265 (84.15%), Query Frame = 0


Query: 49  ASMGGFDRNRNDVHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGN 108
           A+  G       VHELL+C VC N M+PPI+QC NGHTLCS+CK RV N CPTCR ELG+
Sbjct: 45  AAASGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGD 104

Query: 109 IRCLALEKVAESLELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDI 168
           IRCLALEKVAESLELPC + + GC E+FPY SKLKHE  C +R + CPYAG ECSVTGDI
Sbjct: 105 IRCLALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDI 164

Query: 169 PYLVMHLKDDHEVDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLG 228
           P+LV HL+DDH+VDMH G +F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG
Sbjct: 165 PFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG 224

Query: 229 TAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQ 288
            APVYMAFLRFMGD+ +A+ ++YSLEVGG GRKLIW+G PRS+RDSH+KVRDSHDGLIIQ
Sbjct: 225 MAPVYMAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQ 284

Query: 289 RKMAQFCSGNEEQELKLKVTGRIWR 314
           R MA F SG + +ELKL+VTGRIW+
Sbjct: 285 RNMALFFSGGDRKELKLRVTGRIWK 309

[Close]

BLAST of Sed0000452 vs. ExPASy Swiss-Prot
Match: Q8S3N1 (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 419.5 bits (1077), Expect = 3.4e-116
Identity = 185/253 (73.12%), Postives = 217/253 (85.77%), Query Frame = 0


Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           V+ELL+C VC N M+PPI+QC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAES
Sbjct: 40  VYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAES 99

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPC Y N GC+ +FPY SKLKHE  C +R + CPYAG EC+  GDI +LV HL+DDH+
Sbjct: 100 LELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHK 159

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMH G +F+HRYVKSNP+EVENATWMLTVF CFG+ FCLHFEAF+LG APVYMAFLRFM
Sbjct: 160 VDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFM 219

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GD+DDA+ ++YSLEVGG+GRK  W+G PRS+RDSH+KVRDSHDGLIIQR MA F SG ++
Sbjct: 220 GDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDK 279

Query: 301 QELKLKVTGRIWR 314
           +ELKL+VTGRIW+
Sbjct: 280 KELKLRVTGRIWK 292

[Close]

BLAST of Sed0000452 vs. ExPASy TrEMBL
Match: A0A5D3DDZ5 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00330 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.1e-168
Identity = 281/315 (89.21%), Postives = 293/315 (93.02%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH +S ASFCKEVTEL L SIDSQ ATSR E KG +FRKAS GGF R+RND
Sbjct: 1   MYQQQKSREEHASSAASFCKEVTELHLTSIDSQPATSRPEFKGVTFRKASTGGFARSRND 60

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK RVQNCCPTCRHELGNIRCLALEKVAES
Sbjct: 61  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 120

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIP LVMHLKDDHE
Sbjct: 121 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 180

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 181 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDD++AKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 241 GDDNEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 300

Query: 301 QELKLKVTGRIWRVK 316
            ELKLKVTGRIWRV+
Sbjct: 301 MELKLKVTGRIWRVR 315

[Close]

BLAST of Sed0000452 vs. ExPASy TrEMBL
Match: A0A1S3BMT4 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491565 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.1e-168
Identity = 281/315 (89.21%), Postives = 293/315 (93.02%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ QKSREEH +S ASFCKEVTEL L SIDSQ ATSR E KG +FRKAS GGF R+RND
Sbjct: 12  MYQQQKSREEHASSAASFCKEVTELHLTSIDSQPATSRPEFKGVTFRKASTGGFARSRND 71

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK RVQNCCPTCRHELGNIRCLALEKVAES
Sbjct: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIP LVMHLKDDHE
Sbjct: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDD++AKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 252 GDDNEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311

Query: 301 QELKLKVTGRIWRVK 316
            ELKLKVTGRIWRV+
Sbjct: 312 MELKLKVTGRIWRVR 326

[Close]

BLAST of Sed0000452 vs. ExPASy TrEMBL
Match: A0A0A0KWV9 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G285710 PE=3 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 5.2e-168
Identity = 281/315 (89.21%), Postives = 292/315 (92.70%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSEASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRND 60
           MYQ  KSREEH +S ASFCKEVTELRL SIDSQ ATSR E KG +FRKAS GGF R+RND
Sbjct: 12  MYQQPKSREEHASSAASFCKEVTELRLTSIDSQPATSRPEFKGVTFRKASTGGFARSRND 71

Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           VHELLDCTVCMNLMHPPIYQC+NGHTLCSSCK RVQNCCPTCRHELGNIRCLALEKVAES
Sbjct: 72  VHELLDCTVCMNLMHPPIYQCANGHTLCSSCKARVQNCCPTCRHELGNIRCLALEKVAES 131

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPCVY+N GCI+MFPY SKLKHEKNCKYR + CPYAGGEC VTGDIP LVMHLKDDHE
Sbjct: 132 LELPCVYQNLGCIDMFPYYSKLKHEKNCKYRPYNCPYAGGECHVTGDIPSLVMHLKDDHE 191

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMHDG SFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM
Sbjct: 192 VDMHDGCSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 251

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GDD +AKQFSYSLEVGGNGRKLIWQGIPRSIRDSH+KVRDSHDGLIIQRK+A FCSGNE 
Sbjct: 252 GDDSEAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSHDGLIIQRKLALFCSGNEG 311

Query: 301 QELKLKVTGRIWRVK 316
            ELKLKVTGRIWRV+
Sbjct: 312 MELKLKVTGRIWRVR 326

[Close]

BLAST of Sed0000452 vs. ExPASy TrEMBL
Match: A0A6J1DI06 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111021266 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.9e-157
Identity = 268/316 (84.81%), Postives = 284/316 (89.87%), Query Frame = 0


Query: 1   MYQLQKSREEHTTSE-ASFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDRNRN 60
           MYQ +K REEHT+S  ASFCKEVTELRL SIDSQAATSR E K  S RK+S  GF RN N
Sbjct: 11  MYQQKKLREEHTSSSGASFCKEVTELRLTSIDSQAATSRPEFKSVSSRKSST-GFGRNCN 70

Query: 61  DVHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAE 120
           +VHELLDCTVCM+LMHPPIYQC+NGHTLCSSCK RV NCCPTCRHELGNIRCL LEKVAE
Sbjct: 71  NVHELLDCTVCMDLMHPPIYQCANGHTLCSSCKSRVHNCCPTCRHELGNIRCLVLEKVAE 130

Query: 121 SLELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDH 180
           SLELPCVY+N GCI+  PY SKLKHEKNCKYR + CPYAGGECSVTGDIPYLVMHLKDDH
Sbjct: 131 SLELPCVYQNLGCIDTLPYYSKLKHEKNCKYRPYNCPYAGGECSVTGDIPYLVMHLKDDH 190

Query: 181 EVDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRF 240
           EVDMH+G SFSHRYVKSNP+EVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRF
Sbjct: 191 EVDMHEGCSFSHRYVKSNPREVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRF 250

Query: 241 MGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNE 300
           MGDDDDAK+FSYSLEVGGNGRKL+WQG PRSIRDSH+KVRDS DGLII R +A FCSGN 
Sbjct: 251 MGDDDDAKKFSYSLEVGGNGRKLMWQGTPRSIRDSHRKVRDSQDGLIIHRNLALFCSGNH 310

Query: 301 EQELKLKVTGRIWRVK 316
            QELKLKV GRIWRV+
Sbjct: 311 GQELKLKVVGRIWRVR 325

[Close]

BLAST of Sed0000452 vs. ExPASy TrEMBL
Match: A0A5C7IUW2 (RING-type E3 ubiquitin transferase OS=Acer yangbiense OX=1000413 GN=EZV62_001706 PE=3 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 1.0e-134
Identity = 224/297 (75.42%), Postives = 257/297 (86.53%), Query Frame = 0


Query: 19  CKEVTELRLASIDSQAATSRAEIKGASFRKAS--MGGFDRNRNDVHELLDCTVCMNLMHP 78
           CKE+ E R+A  D +  TS  E++G+  RKA+   GG   + NDVHELL+C VCMNLM+P
Sbjct: 8   CKEIIESRIAFADYETTTSNVELRGSPCRKATTGFGGNTTSTNDVHELLECPVCMNLMYP 67

Query: 79  PIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAESLELPCVYENQGCIEMF 138
           PIYQC NGHT+CS+CKVRV+N CPTCRHELGNIRCLALEKVAESLELPC Y+  GC ++F
Sbjct: 68  PIYQCPNGHTVCSNCKVRVRNSCPTCRHELGNIRCLALEKVAESLELPCRYQILGCHDIF 127

Query: 139 PYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHEVDMHDGYSFSHRYVKS 198
           PY  KLKHEKNCKYR + CPYAG ECSVTGDIP+LVMHLK+DH+VDMHDG +F+HRYVK+
Sbjct: 128 PYYGKLKHEKNCKYRPYNCPYAGAECSVTGDIPFLVMHLKNDHKVDMHDGSTFNHRYVKA 187

Query: 199 NPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLEVG 258
           N QEVENATWMLTVFNCFGRQFCLHFEAF LG+APVYMAFLRFMGD+D+A+QFSY+LEVG
Sbjct: 188 NAQEVENATWMLTVFNCFGRQFCLHFEAFHLGSAPVYMAFLRFMGDEDEARQFSYTLEVG 247

Query: 259 GNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEEQELKLKVTGRIWR 314
           GNGRKL WQGIPRSIRDSH+KVRDS DGLIIQR +A F SG ++QELKLKV GRIW+
Sbjct: 248 GNGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGDKQELKLKVAGRIWK 304

[Close]

BLAST of Sed0000452 vs. TAIR 10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2 )

HSP 1 Score: 452.2 bits (1162), Expect = 3.4e-127
Identity = 208/301 (69.10%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 17  SFCKEVTELRLASIDSQAATSRAEIKGASFRKASMGGFDR----NRNDVHELLDCTVCMN 76
           S  KEV E     +D +  T++ E+      K    G  +    + N V+ELL+C VC N
Sbjct: 6   SALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLECPVCTN 65

Query: 77  LMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAESLELPCVYENQGC 136
           LM+PPI+QC NGHTLCS+CK+RVQN CPTCR+ELGNIRCLALEKVAESLE+PC Y+N GC
Sbjct: 66  LMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGC 125

Query: 137 IEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHEVDMHDGYSFSHR 196
            ++FPY SKLKHE++C++R + CPYAG ECSVTGDIP LV+HLKDDH+VDMHDG +F+HR
Sbjct: 126 HDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGCTFNHR 185

Query: 197 YVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYS 256
           YVKSNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD+++AK+FSYS
Sbjct: 186 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYS 245

Query: 257 LEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEEQELKLKVTGRIW 314
           LEVG +GRKL WQGIPRSIRDSH+KVRDS DGLII R +A + SG + QELKL+VTGRIW
Sbjct: 246 LEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRVTGRIW 305

[Close]

BLAST of Sed0000452 vs. TAIR 10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 446.8 bits (1148), Expect = 1.4e-125
Identity = 208/299 (69.57%), Postives = 247/299 (82.61%), Query Frame = 0


Query: 17  SFCKEVTELRLASIDSQAATSRAEI--KGASFRKASMGGFDRNRNDVHELLDCTVCMNLM 76
           S  KE  E     +D +   ++ E   K       S+G F  + N V+ELL+C VC NLM
Sbjct: 6   SALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKF-HSSNGVYELLECPVCTNLM 65

Query: 77  HPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAESLELPCVYENQGCIE 136
           +PPI+QC NGHTLCSSCK+RVQN CPTCR+ELGNIRCLALEKVAESLE+PC Y+N GC +
Sbjct: 66  YPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQD 125

Query: 137 MFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHEVDMHDGYSFSHRYV 196
           +FPY SKLKHE++C++RS+ CPYAG ECSVTGDIP LV HLKDDH+VDMHDG +F+HRYV
Sbjct: 126 IFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYV 185

Query: 197 KSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFMGDDDDAKQFSYSLE 256
           KSNP EVENATWMLTVFNCFGRQFCLHFEAF+LG APVYMAFLRFMGD+++AK+FSYSLE
Sbjct: 186 KSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLE 245

Query: 257 VGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEEQELKLKVTGRIWR 314
           VG + RKL WQGIPRSIRDSH+KVRDS DGLII R +A + SG++++ELKL+VTGRIW+
Sbjct: 246 VGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWK 303

[Close]

BLAST of Sed0000452 vs. TAIR 10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 426.0 bits (1094), Expect = 2.6e-119
Identity = 191/265 (72.08%), Postives = 223/265 (84.15%), Query Frame = 0


Query: 49  ASMGGFDRNRNDVHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGN 108
           A+  G       VHELL+C VC N M+PPI+QC NGHTLCS+CK RV N CPTCR ELG+
Sbjct: 45  AAASGLLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGD 104

Query: 109 IRCLALEKVAESLELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDI 168
           IRCLALEKVAESLELPC + + GC E+FPY SKLKHE  C +R + CPYAG ECSVTGDI
Sbjct: 105 IRCLALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDI 164

Query: 169 PYLVMHLKDDHEVDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLG 228
           P+LV HL+DDH+VDMH G +F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG
Sbjct: 165 PFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLG 224

Query: 229 TAPVYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQ 288
            APVYMAFLRFMGD+ +A+ ++YSLEVGG GRKLIW+G PRS+RDSH+KVRDSHDGLIIQ
Sbjct: 225 MAPVYMAFLRFMGDETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQ 284

Query: 289 RKMAQFCSGNEEQELKLKVTGRIWR 314
           R MA F SG + +ELKL+VTGRIW+
Sbjct: 285 RNMALFFSGGDRKELKLRVTGRIWK 309

[Close]

BLAST of Sed0000452 vs. TAIR 10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 417.2 bits (1071), Expect = 1.2e-116
Identity = 185/253 (73.12%), Postives = 218/253 (86.17%), Query Frame = 0


Query: 61  VHELLDCTVCMNLMHPPIYQCSNGHTLCSSCKVRVQNCCPTCRHELGNIRCLALEKVAES 120
           V+ELL+C VC   M+PPI+QC NGHTLCS+CKVRV N CPTCR ELG+IRCLALEKVAES
Sbjct: 58  VYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAES 117

Query: 121 LELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYLVMHLKDDHE 180
           LELPC + N GC E+FPY SKLKHE  C +R + CPYAG EC + GDIP+LV HL+DDH+
Sbjct: 118 LELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHK 177

Query: 181 VDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAPVYMAFLRFM 240
           VDMH G +F+HRYVKSNP+EVENATWMLTVF+CFG+ FCLHFEAF+LG  PVYMAFLRFM
Sbjct: 178 VDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFM 237

Query: 241 GDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKMAQFCSGNEE 300
           GD++DA+ +SYSLEVGG+GRKL W+G PRSIRDSH+KVRDS+DGLIIQR MA F SG + 
Sbjct: 238 GDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDR 297

Query: 301 QELKLKVTGRIWR 314
           +ELKL+VTG+IW+
Sbjct: 298 KELKLRVTGKIWK 310

[Close]

BLAST of Sed0000452 vs. TAIR 10
Match: AT5G53360.1 (TRAF-like superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-91
Identity = 147/202 (72.77%), Postives = 174/202 (86.14%), Query Frame = 0


Query: 112 LALEKVAESLELPCVYENQGCIEMFPYNSKLKHEKNCKYRSFKCPYAGGECSVTGDIPYL 171
           +ALEKVAESLELPC Y N GC+ +FPY SKLKHE  C +R + CPYAG EC+  GDI +L
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 172 VMHLKDDHEVDMHDGYSFSHRYVKSNPQEVENATWMLTVFNCFGRQFCLHFEAFRLGTAP 231
           V HL+DDH+VDMH G +F+HRYVKSNP+EVENATWMLTVF CFG+ FCLHFEAF+LG AP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 232 VYMAFLRFMGDDDDAKQFSYSLEVGGNGRKLIWQGIPRSIRDSHQKVRDSHDGLIIQRKM 291
           VYMAFLRFMGD+DDA+ ++YSLEVGG+GRK  W+G PRS+RDSH+KVRDSHDGLIIQR M
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 292 AQFCSGNEEQELKLKVTGRIWR 314
           A F SG +++ELKL+VTGRIW+
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWK 216

The following BLAST results are available for this feature:

BLAST of Sed0000452 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900383.1	2.3e-170	90.76	E3 ubiquitin-protein ligase SINAT2-like isoform X2 [Benincasa hispida]	[more]
XP_038900384.1	2.3e-170	90.76	E3 ubiquitin-protein ligase SINAT2-like isoform X3 [Benincasa hispida] >XP_03890...	[more]
XP_038900385.1	2.3e-170	90.76	E3 ubiquitin-protein ligase SINAT2-like isoform X4 [Benincasa hispida]	[more]
XP_038900382.1	2.3e-170	90.76	E3 ubiquitin-protein ligase SINAT2-like isoform X1 [Benincasa hispida]	[more]
XP_008449780.1	6.3e-168	89.21	PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Cucumis melo]	[more]

BLAST of Sed0000452 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2P4	4.8e-126	69.10	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana OX=3702 GN=SINAT2 PE=...	[more]
P93748	2.0e-124	69.57	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q10L91	3.9e-120	75.29	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]
Q84JL3	3.7e-118	72.08	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
Q8S3N1	3.4e-116	73.12	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=...	[more]

BLAST of Sed0000452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DDZ5	3.1e-168	89.21	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BMT4	3.1e-168	89.21	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103491565 PE=3 ...	[more]
A0A0A0KWV9	5.2e-168	89.21	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_4G285710 PE...	[more]
A0A6J1DI06	1.9e-157	84.81	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102126...	[more]
A0A5C7IUW2	1.0e-134	75.42	RING-type E3 ubiquitin transferase OS=Acer yangbiense OX=1000413 GN=EZV62_001706...	[more]

BLAST of Sed0000452 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58040.1	3.4e-127	69.10	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	1.4e-125	69.57	Protein with RING/U-box and TRAF-like domains	[more]
AT3G61790.1	2.6e-119	72.08	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	1.2e-116	73.12	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	1.8e-91	72.77	TRAF-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 109..214 e-value: 4.0E-37 score: 128.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 5..119 e-value: 1.9E-7 score: 32.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 120..175 e-value: 4.1E-16 score: 60.9
None	No IPR available	PANTHER	PTHR10315	E3 UBIQUITIN PROTEIN LIGASE SIAH	coord: 17..214
None	No IPR available	PANTHER	PTHR10315:SF123	E3 UBIQUITIN-PROTEIN LIGASE SINAT2-LIKE	coord: 17..214
None	No IPR available	CDD	cd16571	RING-HC_SIAHs	coord: 65..103 e-value: 6.66681E-13 score: 59.2206
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 50..107
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 120..212
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 120..180 score: 13.153067
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 67..103 score: 9.258371

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0000452.1	Sed0000452.1	mRNA
Sed0000452.2	Sed0000452.2	mRNA
Sed0000452.3	Sed0000452.3	mRNA
Sed0000452.4	Sed0000452.4	mRNA
Sed0000452.5	Sed0000452.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding