Pay0003180 (gene) Melon (Payzawat) v1

Overview


Name	Pay0003180
Type	gene
Organism	Cucumis melo L. var. inodorus cv. Payzawat (Melon (Payzawat) v1)
Description	S-protein homolog
Location	chr04: 2289672 .. 2290106 (-)
RNA-Seq Expression	Pay0003180
Synteny	Pay0003180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTCTCAAATATATAGCAATCGTTGGTATAATTTTAGCATTGAGTGGCCAATGCAATGGACAACCTTGGACAGAGGTTCCATTGAGTTCATGGAAGATTAATGTTTTGAACGAGATGAGCAAAGACTCATTGTTTCTTCATTGTAAGTCTAAAGATGATGACTTAGGTACACATAATTTAGGTTTAAAACAGCAATTTTCATGGAGTTTCAGGGAGAATTTATGGCGAACGACGTTGTATTGGTGTTATATGCACAATGCCAATAGTCATACTTCGCTTAATGTATTTTGGCCTGAGACATCTGGTTGGCTTGCTTTTAGATGTCAACTTAGAAACTACATTTGGTCTGCTCGAGATGATGGAATTTACTTGAAGACAAACACTCACAATACTTTTGAGCGCATACATATTTGGGAACCTGGAATGTGA

mRNA sequence

ATGGAAGCTCTCAAATATATAGCAATCGTTGGTATAATTTTAGCATTGAGTGGCCAATGCAATGGACAACCTTGGACAGAGGTTCCATTGAGTTCATGGAAGATTAATGTTTTGAACGAGATGAGCAAAGACTCATTGTTTCTTCATTGTAAGTCTAAAGATGATGACTTAGGTACACATAATTTAGGTTTAAAACAGCAATTTTCATGGAGTTTCAGGGAGAATTTATGGCGAACGACGTTGTATTGGTGTTATATGCACAATGCCAATAGTCATACTTCGCTTAATGTATTTTGGCCTGAGACATCTGGTTGGCTTGCTTTTAGATGTCAACTTAGAAACTACATTTGGTCTGCTCGAGATGATGGAATTTACTTGAAGACAAACACTCACAATACTTTTGAGCGCATACATATTTGGGAACCTGGAATGTGA

Coding sequence (CDS)

ATGGAAGCTCTCAAATATATAGCAATCGTTGGTATAATTTTAGCATTGAGTGGCCAATGCAATGGACAACCTTGGACAGAGGTTCCATTGAGTTCATGGAAGATTAATGTTTTGAACGAGATGAGCAAAGACTCATTGTTTCTTCATTGTAAGTCTAAAGATGATGACTTAGGTACACATAATTTAGGTTTAAAACAGCAATTTTCATGGAGTTTCAGGGAGAATTTATGGCGAACGACGTTGTATTGGTGTTATATGCACAATGCCAATAGTCATACTTCGCTTAATGTATTTTGGCCTGAGACATCTGGTTGGCTTGCTTTTAGATGTCAACTTAGAAACTACATTTGGTCTGCTCGAGATGATGGAATTTACTTGAAGACAAACACTCACAATACTTTTGAGCGCATACATATTTGGGAACCTGGAATGTGA

Protein sequence

MEALKYIAIVGIILALSGQCNGQPWTEVPLSSWKINVLNEMSKDSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIWEPGM

Homology

[Close]

BLAST of Pay0003180 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 30  LSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHN 89
           +S W++ V+N ++  ++LF+HCKSK+DDLG  NL  + +FSW+F EN+  +T +WCYM+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 90  ANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIWEPG 144
            N H ++NVFW +    L  RC  +N IW+A+ DG+YL  +          WE G
Sbjct: 98  DNGHMNVNVFWDDVI--LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of Pay0003180 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 9.4e-21
Identity = 42/98 (42.86%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 30  LSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHN 89
           +S W++ V N ++  ++LF+HCKSK++DLG  NL    +FSW+F EN+  +TL+WCYM  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 90  ANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGIYL 127
            + H ++ VFW +    L  RC  +N +W+A++DG+YL
Sbjct: 98  DDGHMNVKVFWDDVI--LFHRCDWKNCVWTAKNDGLYL 133

[Close]

BLAST of Pay0003180 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 0


Query: 36  NVLNEMSKDSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSL 95
           N LN  +K+ L +HCKSK++D+G   L + +  S+SF+ N W TT +WC ++    +   
Sbjct: 30  NELNPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRY 89

Query: 96  NVFWPETSGWLAFRCQLRNYIWSARDDGIY 126
                  +  L F     +Y W ARDDGIY
Sbjct: 90  RGITAYQAIGL-FAKDGSSYNWLARDDGIY 118

[Close]

BLAST of Pay0003180 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08
Identity = 37/136 (27.21%), Postives = 62/136 (45.59%), Query Frame = 0


Query: 6   YIAIVGIILALSGQCNGQPWTEVPLSSWKINVLNEMS-KDSLFLHCKSKDDDLGTHNLGL 65
           ++ +  I+  +   C+G      P +   + V N +S + +L + C+SKDDDLG H L  
Sbjct: 8   FVVLSIILFYVISSCHGYN----PFAKTVVTVTNNISPQTTLTISCRSKDDDLGEHLLLH 67

Query: 66  KQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGI 125
            Q F W FR + +RTTL+ C     N+    + +  +      + C      WS   D  
Sbjct: 68  GQAFLWKFRPSWFRTTLFTCKFLWNNNVKWFDTYRSDRDQGHCYSCN-----WSINADSA 127

Query: 126 YLKTNTHNTFERIHIW 141
            +  N +  F+R + W
Sbjct: 128 CISGNFNKKFDRCYPW 134

[Close]

BLAST of Pay0003180 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.4e-08
Identity = 27/89 (30.34%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 35  INVLNEMSKDSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTS 94
           + + N +    L +HCKSK DDLG H +  KQ++ + F+ NLW++TL++C     +   S
Sbjct: 31  VTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKS 90

Query: 95  LNVFWPETSGWLAFRCQLRNYIWSARDDG 124
            +++  +    +   CQ     W  + DG
Sbjct: 91  FDIYDAQRDQGICDDCQ-----WEIKPDG 114

[Close]

BLAST of Pay0003180 vs. ExPASy TrEMBL
Match: A0A6J1H9E9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30
Identity = 63/146 (43.15%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 2   EALKYIAIVGIILALSGQCNGQPWTE----VPLSSWKINVLNEMSKDSLFLHCKSKDDDL 61
           E  +++     +L L      QP       VP+ +W+++V+N ++  +LF+HCKSKDDDL
Sbjct: 49  EKKRHLKAAAFLLGLLASALTQPLAMAIGIVPIQNWRVHVVNRLNNATLFVHCKSKDDDL 108

Query: 62  GTHNL-GLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPE-TSGWLAFRCQLRNY 121
           G HNL G+  +F WSF+ NLW TTL+WC +   N++ S   FW E T  WL +RC   N 
Sbjct: 109 GFHNLVGVGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCHGGNC 168

Query: 122 IWSARDDGIYLKTNTHNTFERIHIWE 142
           IW+ARDDG+YL+ N  +  ER+H W+
Sbjct: 169 IWTARDDGVYLRNNPDSVDERVHKWK 194

[Close]

BLAST of Pay0003180 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.3e-30
Identity = 58/116 (50.00%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 28  VPLSSWKINVLNEMSKDSLFLHCKSKDDDLGTHNL-GLKQQFSWSFRENLWRTTLYWCYM 87
           VP+  W+++V+N ++  +LF+HCKSKDDDLG HNL G+  +F WSF+ NLW TTL+WC +
Sbjct: 79  VPIQKWRVHVVNRLNNATLFVHCKSKDDDLGFHNLVGIGSEFQWSFKNNLWATTLFWCLL 138

Query: 88  HNANSHTSLNVFWPE-TSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIWE 142
              N++ S   FW E T  WL +RC  RN IW+A+DDG+YL+ N     ER+H W+
Sbjct: 139 RKPNAYVSFEAFWIEKTHIWLNYRCYGRNCIWTAKDDGVYLRNNPDGVDERVHKWK 194

[Close]

BLAST of Pay0003180 vs. ExPASy TrEMBL
Match: A0A5E4EJG4 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 64/131 (48.85%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 13  ILALSGQCNGQPWTEVPLSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWS 72
           ILALS  C G P   +  ++W ++V+N +S   +LF HCKSKDDDLG  NL    +F+WS
Sbjct: 16  ILALSAPCLGSP-VGIRYNTWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWS 75

Query: 73  FRENLWRTTLYWCYMHNANSHTSLNVFWPE-TSGWLAFRCQLRNYIWSARDDGIYLKTNT 132
           F+EN + TTLYWCYM     H +L+VFW E    WL +RC  ++ IW A+DDGIY+K   
Sbjct: 76  FKENFFGTTLYWCYMSTDQKHAALDVFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIP 135

Query: 133 HNTFERIHIWE 142
            N  E  H WE
Sbjct: 136 ENRDEFSHKWE 145

[Close]

BLAST of Pay0003180 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 30  LSSWKINVLNEMSKDSLFLHCKSKDDDLGTHNLGLK-QQFSWSFRENLWRTTLYWCYMHN 89
           L  W I+V+N +SK +LF+HCKSKDDDLG HNL  +  +F W+F+ N W TTLYWCY+  
Sbjct: 35  LPKWHIHVVNGLSKVTLFVHCKSKDDDLGVHNLVTRGDEFQWTFQVNFWATTLYWCYLKK 94

Query: 90  ANSHTSLNVFWPE-TSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIW 141
            N+  S   FW E T  WL +RC  +N IW+A+DDGIYL+ N     ERIH W
Sbjct: 95  PNADVSFESFWVEQTHMWLQYRCTDKNCIWTAKDDGIYLRNNPDGVDERIHEW 147

[Close]

BLAST of Pay0003180 vs. ExPASy TrEMBL
Match: A0A6J5Y6Z2 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51616 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.2e-28
Identity = 64/131 (48.85%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 13  ILALSGQCNGQPWTEVPLSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWS 72
           +LALS  C G P   +  +SW ++V+N +S   +LF HCKSKDDDLG  NL    +F+WS
Sbjct: 16  MLALSAPCLGSP-VGIRYNSWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWS 75

Query: 73  FRENLWRTTLYWCYMHNANSHTSLNVFWPETSG-WLAFRCQLRNYIWSARDDGIYLKTNT 132
           F+EN   TTLYWCYM    +H +L+VFW E    WL +RC  ++ IW A+DDGIY+K   
Sbjct: 76  FKENFLGTTLYWCYMSTGQNHAALDVFWVEGEHIWLQYRCNWKDCIWIAKDDGIYIKIIP 135

Query: 133 HNTFERIHIWE 142
            N  E  H WE
Sbjct: 136 ENRDEFSHKWE 145

[Close]

BLAST of Pay0003180 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70
Identity = 119/144 (82.64%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MEALKYIAIVGIILALSGQCNGQPWTEVPLSSWKINVLNEMSKDSLFLHCKSKDDDLGTH 60
           MEALKYIA+VG+ILAL G+CNGQP  EVPLSSWK+N+LNEM+KDSLF+ CKSKDDDLG  
Sbjct: 76  MEALKYIAVVGVILALIGECNGQPGAEVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQ 135

Query: 61  NLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNYIWSAR 120
           NLG+KQQFSWSF+ENLW+TTLYWCYMHNA SH S NV+WPE SGWLAFRCQLRN IWSAR
Sbjct: 136 NLGVKQQFSWSFKENLWQTTLYWCYMHNAKSHASFNVYWPERSGWLAFRCQLRNCIWSAR 195

Query: 121 DDGIYLKTNTHNTFERIHIWEPGM 145
           DDGIYLKTNTHNT+E IH WEPGM
Sbjct: 196 DDGIYLKTNTHNTYELIHTWEPGM 219

[Close]

BLAST of Pay0003180 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70
Identity = 119/144 (82.64%), Postives = 131/144 (90.97%), Query Frame = 0


Query: 1   MEALKYIAIVGIILALSGQCNGQPWTEVPLSSWKINVLNEMSKDSLFLHCKSKDDDLGTH 60
           MEALKYIA+VG+ILAL G+CNGQP  EVPLSSWK+N+LNEM+KDSLF+ CKSKDDDLG  
Sbjct: 1   MEALKYIAVVGVILALIGECNGQPGAEVPLSSWKVNILNEMTKDSLFIRCKSKDDDLGAQ 60

Query: 61  NLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNYIWSAR 120
           NLG+KQQFSWSF+ENLW+TTLYWCYMHNA SH S NV+WPE SGWLAFRCQLRN IWSAR
Sbjct: 61  NLGVKQQFSWSFKENLWQTTLYWCYMHNAKSHASFNVYWPERSGWLAFRCQLRNCIWSAR 120

Query: 121 DDGIYLKTNTHNTFERIHIWEPGM 145
           DDGIYLKTNTHNT+E IH WEPGM
Sbjct: 121 DDGIYLKTNTHNTYELIHTWEPGM 144

[Close]

BLAST of Pay0003180 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 1   MEALKYIAIVGIILALSGQCNGQPWTEVPLSSWKINVLNEMSKDSLFLHCKSKDDDLGTH 60
           MEALKYIAIV +ILAL G+CNGQP  EVPLSSWKIN+LNEM+KD+LFL CKSKDDDLG  
Sbjct: 1   MEALKYIAIVCVILALIGECNGQPGAEVPLSSWKINILNEMTKDTLFLQCKSKDDDLGAQ 60

Query: 61  NLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNYIWSAR 120
           NLG+KQQFSWSF+ENLW+TTLYWCYMHNA SH S NVFWPE SGWLAFRCQLRN IWSAR
Sbjct: 61  NLGVKQQFSWSFKENLWQTTLYWCYMHNAESHASFNVFWPEKSGWLAFRCQLRNCIWSAR 120

Query: 121 DDGIYLKTNTHNTFERIHIWEPGM 145
           DDGIYLKTN HNTFE IH WEPGM
Sbjct: 121 DDGIYLKTNPHNTFELIHTWEPGM 144

[Close]

BLAST of Pay0003180 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus])

HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69
Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 0


Query: 1   MEALKYIAIVGIILALSGQCNGQPWTEVPLSSWKINVLNEMSKDSLFLHCKSKDDDLGTH 60
           MEALKYIAIV +ILAL G+CNGQP  EVPLSSWKIN+LNEM+KD+LFL CKSKDDDLG  
Sbjct: 11  MEALKYIAIVCVILALIGECNGQPGAEVPLSSWKINILNEMTKDTLFLQCKSKDDDLGAQ 70

Query: 61  NLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNYIWSAR 120
           NLG+KQQFSWSF+ENLW+TTLYWCYMHNA SH S NVFWPE SGWLAFRCQLRN IWSAR
Sbjct: 71  NLGVKQQFSWSFKENLWQTTLYWCYMHNAESHASFNVFWPEKSGWLAFRCQLRNCIWSAR 130

Query: 121 DDGIYLKTNTHNTFERIHIWEPGM 145
           DDGIYLKTN HNTFE IH WEPGM
Sbjct: 131 DDGIYLKTNPHNTFELIHTWEPGM 154

[Close]

BLAST of Pay0003180 vs. NCBI nr
Match: XP_022959899.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-30
Identity = 63/146 (43.15%), Postives = 91/146 (62.33%), Query Frame = 0


Query: 2   EALKYIAIVGIILALSGQCNGQPWTE----VPLSSWKINVLNEMSKDSLFLHCKSKDDDL 61
           E  +++     +L L      QP       VP+ +W+++V+N ++  +LF+HCKSKDDDL
Sbjct: 49  EKKRHLKAAAFLLGLLASALTQPLAMAIGIVPIQNWRVHVVNRLNNATLFVHCKSKDDDL 108

Query: 62  GTHNL-GLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPE-TSGWLAFRCQLRNY 121
           G HNL G+  +F WSF+ NLW TTL+WC +   N++ S   FW E T  WL +RC   N 
Sbjct: 109 GFHNLVGVGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLNYRCHGGNC 168

Query: 122 IWSARDDGIYLKTNTHNTFERIHIWE 142
           IW+ARDDG+YL+ N  +  ER+H W+
Sbjct: 169 IWTARDDGVYLRNNPDSVDERVHKWK 194

[Close]

BLAST of Pay0003180 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 30  LSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHN 89
           +S W++ V+N ++  ++LF+HCKSK+DDLG  NL  + +FSW+F EN+  +T +WCYM+ 
Sbjct: 38  ISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNK 97

Query: 90  ANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIWEPG 144
            N H ++NVFW +    L  RC  +N IW+A+ DG+YL  +          WE G
Sbjct: 98  DNGHMNVNVFWDDVI--LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of Pay0003180 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.3 bits (251), Expect = 6.7e-22
Identity = 42/98 (42.86%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 30  LSSWKINVLNEMSK-DSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHN 89
           +S W++ V N ++  ++LF+HCKSK++DLG  NL    +FSW+F EN+  +TL+WCYM  
Sbjct: 38  ISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSK 97

Query: 90  ANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGIYL 127
            + H ++ VFW +    L  RC  +N +W+A++DG+YL
Sbjct: 98  DDGHMNVKVFWDDVI--LFHRCDWKNCVWTAKNDGLYL 133

[Close]

BLAST of Pay0003180 vs. TAIR 10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 36/114 (31.58%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 34  KINVLNEMSKD----SLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWC-YMHN 93
           K+++ N++  +     LF+ CKS   D+G H +   + + +  R+N W+TTL+WC + H 
Sbjct: 25  KLHIWNDLDPNQKHSDLFVQCKSGKADMGKHYVKYGKIYQFDIRDNFWKTTLFWCTFRHG 84

Query: 94  ANSHTSLNVFWPETSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIWEP 143
            +  T       E    +A   Q   Y W+AR+DGIY + N   T  ++H W+P
Sbjct: 85  PDYRTGQQFDVYEYKPGVA---QGGTYEWTAREDGIYFRLN-QGTIHKVHNWKP 134

[Close]

BLAST of Pay0003180 vs. TAIR 10
Match: AT1G28306.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 45/147 (30.61%), Postives = 70/147 (47.62%), Query Frame = 0


Query: 4   LKYIAIVGIILALSGQC----NGQPWTEVPLSSWKINVLNEMSKD----SLFLHCKSKDD 63
           +KY+    +IL + G C    NG   T       KIN+ N++  +    +LF+HCKSK  
Sbjct: 1   MKYLL---VILFVYGLCIIVVNGSRTTN------KINIWNDLDPNHKHTTLFVHCKSKTI 60

Query: 64  DLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLNVFWPETSGWLAFRCQLRNY 123
           D G   L   + + +  +E   R TL+WC + +   +T    F       +    Q  +Y
Sbjct: 61  DKGRQELPWGKLYQFPVKETWLRNTLFWCTLRHGPGYTIGQQFDAYKYTGVP---QGSDY 120

Query: 124 IWSARDDGIYLKTNTHNTFERIHIWEP 143
            W AR+DGIY + N   T  ++H W+P
Sbjct: 121 DWIAREDGIYFRVN-RGTIRKVHNWKP 134

[Close]

BLAST of Pay0003180 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-11
Identity = 35/104 (33.65%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 37  VLNEMSKDSLFLHCKSKDDDLGTHNLGLKQQFSWSFRENLWRTTLYWCYMHNANSHTSLN 96
           V NE++   L + C+SKDD+LG H L + Q    +F +N+WR TL+WC +          
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLHV 85

Query: 97  VFWPETSGWLAFRCQLRNYIWSARDDGIYLKTNTHNTFERIHIW 141
            F    S W A       Y+W AR+DGIY   +     ++ + W
Sbjct: 86  AFDAYRSQWKADIGP--RYLWIAREDGIYYTQHPETPPKKKYDW 127

The following BLAST results are available for this feature:

BLAST of Pay0003180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.6e-23	41.74	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	9.4e-21	42.86	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	2.2e-09	36.67	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
P0DN93	1.8e-08	27.21	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
O23020	2.4e-08	30.34	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of Pay0003180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9E9	1.0e-30	43.15	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1	[more]
A0A6J1L0E8	2.3e-30	50.00	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1	[more]
A0A5E4EJG4	1.3e-28	48.85	S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1	[more]
A0A6J1CPC6	1.7e-28	53.10	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1	[more]
A0A6J5Y6Z2	2.2e-28	48.85	S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51616 PE=3 SV=1	[more]

BLAST of Pay0003180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651384.1	2.1e-70	82.64	hypothetical protein Csa_001671 [Cucumis sativus]	[more]
XP_004136435.1	2.1e-70	82.64	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_004136434.3	1.8e-69	84.03	S-protein homolog 1-like [Cucumis sativus]	[more]
KGN60342.2	1.8e-69	84.03	hypothetical protein Csa_002569, partial [Cucumis sativus]	[more]
XP_022959899.1	2.2e-30	43.15	S-protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of Pay0003180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.1e-24	41.74	S-protein homologue 1	[more]
AT4G29035.1	6.7e-22	42.86	Plant self-incompatibility protein S1 family	[more]
AT1G28305.1	1.7e-12	31.58	Plant self-incompatibility protein S1 family	[more]
AT1G28306.1	1.4e-11	30.61	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	7.0e-11	33.65	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Payzawat) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 35..140 e-value: 4.5E-23 score: 81.8
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 29..132
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 29..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Pay0003180.1	Pay0003180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006974	cellular response to DNA damage stimulus
cellular_component	GO:0110165	cellular anatomical entity