PI0022302 (gene) Melon (PI 482460) v1

Overview


Name	PI0022302
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	50S ribosomal protein L10
Location	chr10: 16530264 .. 16531383 (-)
RNA-Seq Expression	PI0022302
Synteny	PI0022302

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGAGGGCTCCATGGAGATTTAAGAAAATTGGAGCAATTTTATTGAATTTCCATTTCTATCCTTCCCGGCCATGGTCTTCAAACCCAAAGCAGCGATAAGATAAGCCCCAGACTGAGCTCTGTCCTCTCTTCTTCTTCCCCAAACCTCTGAAATTCCGCCATGGAAGCTTCTCTTATAAGCTTTACATCCTTCACACCTCCTCCTTCTTCTTCTCAAATTCTAACCCTAAACAGACCCACAAACCCATTGTCCTTCTCTCTCCCCCGCCATTCCACCAATCAAACCCGCCATTATCGTGGTCTCAAGGTTGCCGCCGCCATTTCCCGCACTAAGAAAGAAGAAACCGTCGAAACAGTCAAACAACAGCTCGAAGACTGCTATCTATTGGCTGGAATCAAGTACAAAGGCTTCACCGTCAAGCAATTTCAAGAACTACGTCGATCTCTTCCTGAAACCTCAAAACTCATTGTCGCTAAAAACACGCTCGTTCTTAAAGCGATTGAAGGGACATCTTGGGAAGCTCTAAAGCCCTGTATGAAGGGCATGAATGTTTGGTTATTTGTTCATTCTGAGGAAATTCCGGCCGCGATTAAGCCTTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACTGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGAATTCAAGGCGCTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCTAAAATGTTGGGTCTGTTGCAGGCTCCTGCGTCAAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAAGCATACGTGCAGAAATTGGAGGAGCAAGGCGGTGGGCAGTAATGTACATAGAAGAAGAGCTTCCATTGTTACCTGTAAGTTAATATGAAAACCCCCTTCTGAATTAGCTGCCTACAGCAAGATGTATGATTGATTTCCCTTTTTTTTTTTGGCCTCTTTGTGTTATCAATATAAAGTTGTTATGAGGAGAAATAGAAACTCTATGAGAAATGAGCATTGTAGAATTGGTGTAAAGTTGAAATTCATTGTAAGCTTTTGATTTTTCACAAGCCTAATGATCAATTTATAAGCTTTCCATTA

mRNA sequence

GAAAAGAGGGCTCCATGGAGATTTAAGAAAATTGGAGCAATTTTATTGAATTTCCATTTCTATCCTTCCCGGCCATGGTCTTCAAACCCAAAGCAGCGATAAGATAAGCCCCAGACTGAGCTCTGTCCTCTCTTCTTCTTCCCCAAACCTCTGAAATTCCGCCATGGAAGCTTCTCTTATAAGCTTTACATCCTTCACACCTCCTCCTTCTTCTTCTCAAATTCTAACCCTAAACAGACCCACAAACCCATTGTCCTTCTCTCTCCCCCGCCATTCCACCAATCAAACCCGCCATTATCGTGGTCTCAAGGTTGCCGCCGCCATTTCCCGCACTAAGAAAGAAGAAACCGTCGAAACAGTCAAACAACAGCTCGAAGACTGCTATCTATTGGCTGGAATCAAGTACAAAGGCTTCACCGTCAAGCAATTTCAAGAACTACGTCGATCTCTTCCTGAAACCTCAAAACTCATTGTCGCTAAAAACACGCTCGTTCTTAAAGCGATTGAAGGGACATCTTGGGAAGCTCTAAAGCCCTGTATGAAGGGCATGAATGTTTGGTTATTTGTTCATTCTGAGGAAATTCCGGCCGCGATTAAGCCTTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACTGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGAATTCAAGGCGCTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCTAAAATGTTGGGTCTGTTGCAGGCTCCTGCGTCAAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAAGCATACGTGCAGAAATTGGAGGAGCAAGGCGGTGGGCAGTAATGTACATAGAAGAAGAGCTTCCATTGTTACCTGTAAGTTAATATGAAAACCCCCTTCTGAATTAGCTGCCTACAGCAAGATGTATGATTGATTTCCCTTTTTTTTTTTGGCCTCTTTGTGTTATCAATATAAAGTTGTTATGAGGAGAAATAGAAACTCTATGAGAAATGAGCATTGTAGAATTGGTGTAAAGTTGAAATTCATTGTAAGCTTTTGATTTTTCACAAGCCTAATGATCAATTTATAAGCTTTCCATTA

Coding sequence (CDS)

ATGGAAGCTTCTCTTATAAGCTTTACATCCTTCACACCTCCTCCTTCTTCTTCTCAAATTCTAACCCTAAACAGACCCACAAACCCATTGTCCTTCTCTCTCCCCCGCCATTCCACCAATCAAACCCGCCATTATCGTGGTCTCAAGGTTGCCGCCGCCATTTCCCGCACTAAGAAAGAAGAAACCGTCGAAACAGTCAAACAACAGCTCGAAGACTGCTATCTATTGGCTGGAATCAAGTACAAAGGCTTCACCGTCAAGCAATTTCAAGAACTACGTCGATCTCTTCCTGAAACCTCAAAACTCATTGTCGCTAAAAACACGCTCGTTCTTAAAGCGATTGAAGGGACATCTTGGGAAGCTCTAAAGCCCTGTATGAAGGGCATGAATGTTTGGTTATTTGTTCATTCTGAGGAAATTCCGGCCGCGATTAAGCCTTATAGGGATTTCCAGAAGGAGAAGAAGCTCGAGGATAATGATTTCACTGGAGCGGTTTTCGAGGGGAAATATTACGGGCCGGATGAATTCAAGGCGCTAGAGACAATGCCGTCGAGAGCGGAGGTTTATGCTAAAATGTTGGGTCTGTTGCAGGCTCCTGCGTCAAGCTTGGTCGGAACGATACAGGCTCCGGCGAGGGAATTGTTGATGGTTTTGAAAGCATACGTGCAGAAATTGGAGGAGCAAGGCGGTGGGCAGTAA

Protein sequence

MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGQ

Homology

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BLAST of PI0022302 vs. ExPASy Swiss-Prot
Match: O80362 (50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.3e-85
Identity = 162/225 (72.00%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 9   TSFTPPPSSSQILTLNRPTN-PLSFSLPRHSTNQTRHYRGLKVAAAISRTKKEETVETVK 68
           T FT P S+S     +  ++   S +LP H   + +  + L + +AISRTKKEETVETVK
Sbjct: 4   TFFTLPSSTSHSYPFSLKSHFNNSLTLPTHPHFKPKS-KNLTIRSAISRTKKEETVETVK 63

Query: 69  QQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCMK 128
           QQLEDCYLLAGI YKG TVKQFQELR  LP+T+KL+VAKNTLVLKAIEGT WEALKPCMK
Sbjct: 64  QQLEDCYLLAGIGYKGLTVKQFQELRSQLPDTTKLLVAKNTLVLKAIEGTKWEALKPCMK 123

Query: 129 GMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRAE 188
           GMN WLFVHSEEIPAA+KPYR FQKEKKLE+NDFTGAVFEGK+YGP+EFKALET+P+RAE
Sbjct: 124 GMNAWLFVHSEEIPAALKPYRTFQKEKKLEENDFTGAVFEGKFYGPEEFKALETLPTRAE 183

Query: 189 VYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGGQ 233
           +YA++LG L+ PAS++VGTIQAPAR L+MVLKAYV+KLEE+GG Q
Sbjct: 184 IYAQLLGSLKGPASAVVGTIQAPARNLVMVLKAYVKKLEEEGGSQ 227

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BLAST of PI0022302 vs. ExPASy Swiss-Prot
Match: Q9FY50 (50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.3e-76
Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           ME +L+SF+S   P    +I TL   T           +N   + R   + +A+SR KKE
Sbjct: 1   MEVALLSFSSSLSPLCHQRISTLTPKT-----------SNSPNYPRLPVIRSAVSRNKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVE VK  LE+C+LLA I YKG TVKQFQ+LRR+LP+T+KLIVAKNTLV KAIEGT WE
Sbjct: 61  ETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD FK LE
Sbjct: 121 ALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQ 229
           TMP+RAEVYAKMLG LQ+PA +LV T+QAPARE++MVL AY++KLE++
Sbjct: 181 TMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

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BLAST of PI0022302 vs. ExPASy Swiss-Prot
Match: P82139 (50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 PE=1 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 2.4e-74
Identity = 142/222 (63.96%), Postives = 173/222 (77.93%), Query Frame = 0


Query: 7   SFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKEETVETV 66
           S +S  P P     LT  R T+       +H T  T       + AAISRTKKEETVETV
Sbjct: 21  SLSSVYPNPFKPNNLTFPRTTH-------KHPTTTT-------ITAAISRTKKEETVETV 80

Query: 67  KQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWEALKPCM 126
           ++ LE+CYLLA I YKGFTVKQFQ+LR++LPE + LIVAKNTLV KA++ T W A+KPCM
Sbjct: 81  QKHLENCYLLAAINYKGFTVKQFQDLRKALPENTTLIVAKNTLVEKAVQDTQWAAIKPCM 140

Query: 127 KGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPSRA 186
           KGMN WLFVHSEEIP AIKPYR FQKE+KLEDNDFTGA FEGK+YGP E K LETMPS+A
Sbjct: 141 KGMNAWLFVHSEEIPIAIKPYRTFQKERKLEDNDFTGACFEGKFYGPGEVKRLETMPSKA 200

Query: 187 EVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQ 229
           E++AK+LG L++P S+LVGT+QAPAR+L+ +LKAY++KLE++
Sbjct: 201 EIFAKLLGSLKSPGSALVGTLQAPARDLVFLLKAYIKKLEDE 228

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BLAST of PI0022302 vs. ExPASy Swiss-Prot
Match: B0UHX8 (50S ribosomal protein L10 OS=Methylobacterium sp. (strain 4-46) OX=426117 GN=rplJ PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16
Identity = 60/172 (34.88%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 54  ISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLI-VAKNTLVLK 113
           + R  K + V ++ +      L+    YKG TV   Q+LRR + +    + VAKN L   
Sbjct: 1   MDRAAKADLVASLNEVFSTTSLVVVAHYKGLTVADMQKLRRQMKQAGATVKVAKNRLANI 60

Query: 114 AIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDND---FTGAVFEGK 173
           A++GT+  ++KP +KG    L  +S +  AA K   DF K      ND     G      
Sbjct: 61  ALDGTNVASIKPLLKGPT--LLAYSSDPVAAAKVAVDFAK-----GNDKLVILGGAMGAT 120

Query: 174 YYGPDEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAY 222
              PD  KAL T+PS  E+ AK++GL+QAPA+ +   + APA +L  V  AY
Sbjct: 121 ALNPDGVKALATLPSLDELRAKIVGLVQAPATKIAQVVNAPAAKLARVFGAY 165

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BLAST of PI0022302 vs. ExPASy Swiss-Prot
Match: B1ZGR8 (50S ribosomal protein L10 OS=Methylorubrum populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) OX=441620 GN=rplJ PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-16
Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = 0


Query: 54  ISRTKKEETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLI-VAKNTLVLK 113
           + RT K + V T+        ++    YKG TV   Q+LR  + +    + VAKN L   
Sbjct: 1   MDRTAKADLVSTLNGVFTTNAVVVVAHYKGLTVADMQKLRSQMKQAGATVKVAKNRLASI 60

Query: 114 AIEGTSWEALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYG 173
           A++GT   ++KP +KG    L  +S +  AA K   DF K    +     G         
Sbjct: 61  ALDGTDVASIKPLLKGPT--LLAYSSDPVAAAKVAVDFAKTN--DKLVILGGAMGTTALN 120

Query: 174 PDEFKALETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLE 227
           PD  KAL T+PS  E+ AK++GL+QAPA+ +   + APA +L  V  AY +K E
Sbjct: 121 PDGVKALATLPSLDELRAKLVGLIQAPATKVAQVVNAPAAKLARVFGAYAKKDE 170

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BLAST of PI0022302 vs. ExPASy TrEMBL
Match: A0A5A7SUB8 (50S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00270 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121
Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASLISFTSFTPPP SSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE
Sbjct: 1   MEASLISFTSFTPPP-SSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVKQQLEDCYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPDEFKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 230

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BLAST of PI0022302 vs. ExPASy TrEMBL
Match: A0A1S3BDM0 (50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121
Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASLISFTSFTPPP SSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE
Sbjct: 1   MEASLISFTSFTPPP-SSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVKQQLEDCYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPDEFKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 230

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BLAST of PI0022302 vs. ExPASy TrEMBL
Match: A0A0A0KLL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.5e-121
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSS-QILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKK 60
           MEASLI+FTSFTPP SSS QILTLNRPTNPLSFSLPRHSTNQTRHYRGLKV+AAISRTKK
Sbjct: 1   MEASLITFTSFTPPSSSSTQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVSAAISRTKK 60

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW
Sbjct: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180
           EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL
Sbjct: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180

Query: 181 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG
Sbjct: 181 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232

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BLAST of PI0022302 vs. ExPASy TrEMBL
Match: A0A6J1JII9 (50S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487249 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.7e-112
Identity = 213/231 (92.21%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASL+SF SF   PSSSQILTLNRPTNPLSFS  RHSTNQ RHYR LKVAAAISRTKKE
Sbjct: 1   MEASLLSFPSF-KTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLL+ PASSLVGT+QAPAR++LMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGG 230

[Close]

BLAST of PI0022302 vs. ExPASy TrEMBL
Match: A0A6J1FTN1 (50S ribosomal protein L10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448014 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110
Identity = 210/231 (90.91%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASL+SF SF   PSSSQILTLNRPTNPLSFS  RHSTNQ RHYR LKVA AISRTKKE
Sbjct: 1   MEASLLSFPSF-KTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAGAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGT+WE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTTWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FK LE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLL+ PASSLVGT+QAPAR++LMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGG 230

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BLAST of PI0022302 vs. NCBI nr
Match: XP_008445837.1 (PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1 50S ribosomal protein L10 [Cucumis melo var. makuwa])

HSP 1 Score: 445.3 bits (1144), Expect = 3.3e-121
Identity = 228/231 (98.70%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASLISFTSFTPPP SSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE
Sbjct: 1   MEASLISFTSFTPPP-SSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVKQQLEDCYLLAGIKYKGFTVK+FQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKEFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGK+YGPDEFKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKFYGPDEFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 230

[Close]

BLAST of PI0022302 vs. NCBI nr
Match: XP_004143603.1 (50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.1 hypothetical protein Csa_000689 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 7.3e-121
Identity = 228/232 (98.28%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSS-QILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKK 60
           MEASLI+FTSFTPP SSS QILTLNRPTNPLSFSLPRHSTNQTRHYRGLKV+AAISRTKK
Sbjct: 1   MEASLITFTSFTPPSSSSTQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVSAAISRTKK 60

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW
Sbjct: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180
           EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL
Sbjct: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180

Query: 181 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG
Sbjct: 181 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232

[Close]

BLAST of PI0022302 vs. NCBI nr
Match: XP_038893368.1 (50S ribosomal protein L10, chloroplastic [Benincasa hispida])

HSP 1 Score: 439.1 bits (1128), Expect = 2.3e-119
Identity = 226/232 (97.41%), Postives = 227/232 (97.84%), Query Frame = 0


Query: 1   MEASLISFTSFTPP-PSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKK 60
           MEASL+SFTSFTPP  SSSQILTLNRPTNP SFS PRHSTNQTRHYRGL VAAAISRTKK
Sbjct: 39  MEASLLSFTSFTPPSSSSSQILTLNRPTNPFSFSPPRHSTNQTRHYRGLMVAAAISRTKK 98

Query: 61  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 120
           EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW
Sbjct: 99  EETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSW 158

Query: 121 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 180
           EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL
Sbjct: 159 EALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKAL 218

Query: 181 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG
Sbjct: 219 ETMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 270

[Close]

BLAST of PI0022302 vs. NCBI nr
Match: KAG6600094.1 (50S ribosomal protein L10, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.5 bits (1064), Expect = 6.2e-112
Identity = 211/231 (91.34%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASL+SF SF  P SSSQILTLNRPTNPLSFS  RHSTNQ RHYR LKVA AISRTKKE
Sbjct: 1   MEASLLSFPSFKTPSSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAGAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FK LE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKTLE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLL+ PASSLVGT+QAPAR++LMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGG 231

[Close]

BLAST of PI0022302 vs. NCBI nr
Match: XP_022990377.1 (50S ribosomal protein L10, chloroplastic [Cucurbita maxima])

HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111
Identity = 213/231 (92.21%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           MEASL+SF SF   PSSSQILTLNRPTNPLSFS  RHSTNQ RHYR LKVAAAISRTKKE
Sbjct: 1   MEASLLSFPSF-KTPSSSQILTLNRPTNPLSFSPLRHSTNQGRHYRCLKVAAAISRTKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVETVK+QL+ CYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE
Sbjct: 61  ETVETVKEQLDKCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPD+FKALE
Sbjct: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDDFKALE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQGGG 232
           TMPSRAEVYAKMLGLL+ PASSLVGT+QAPAR++LMVLKAYVQKLEEQGGG
Sbjct: 181 TMPSRAEVYAKMLGLLKGPASSLVGTLQAPARDVLMVLKAYVQKLEEQGGG 230

[Close]

BLAST of PI0022302 vs. TAIR 10
Match: AT5G13510.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 286.2 bits (731), Expect = 2.4e-77
Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 0


Query: 1   MEASLISFTSFTPPPSSSQILTLNRPTNPLSFSLPRHSTNQTRHYRGLKVAAAISRTKKE 60
           ME +L+SF+S   P    +I TL   T           +N   + R   + +A+SR KKE
Sbjct: 1   MEVALLSFSSSLSPLCHQRISTLTPKT-----------SNSPNYPRLPVIRSAVSRNKKE 60

Query: 61  ETVETVKQQLEDCYLLAGIKYKGFTVKQFQELRRSLPETSKLIVAKNTLVLKAIEGTSWE 120
           ETVE VK  LE+C+LLA I YKG TVKQFQ+LRR+LP+T+KLIVAKNTLV KAIEGT WE
Sbjct: 61  ETVEAVKSHLENCHLLAAINYKGLTVKQFQDLRRTLPDTTKLIVAKNTLVFKAIEGTKWE 120

Query: 121 ALKPCMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALE 180
           ALKPCMKGMN WLFV ++EIP+AIKPYR FQKE+KLE+NDF GAVFEGK+Y PD FK LE
Sbjct: 121 ALKPCMKGMNAWLFVQTDEIPSAIKPYRSFQKERKLENNDFAGAVFEGKFYAPDNFKVLE 180

Query: 181 TMPSRAEVYAKMLGLLQAPASSLVGTIQAPARELLMVLKAYVQKLEEQ 229
           TMP+RAEVYAKMLG LQ+PA +LV T+QAPARE++MVL AY++KLE++
Sbjct: 181 TMPTRAEVYAKMLGALQSPAINLVTTLQAPAREVIMVLMAYIKKLEDE 217

[Close]

BLAST of PI0022302 vs. TAIR 10
Match: AT3G12370.1 (Ribosomal protein L10 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 7.4e-47
Identity = 91/146 (62.33%), Postives = 109/146 (74.66%), Query Frame = 0


Query: 67  KQQLEDCYLLAGIKYKGFTVKQFQELRRSLPE--TSKLIVAKNTLVLKAIEGTSWEALKP 126
           K  LE+C+ + GI Y G +VKQ QELR  L E   +KL+VAKNTLV KA+EGT WE+LKP
Sbjct: 15  KINLENCHFITGINYNGLSVKQLQELRGILRENTNTKLLVAKNTLVYKALEGTKWESLKP 74

Query: 127 CMKGMNVWLFVHSEEIPAAIKPYRDFQKEKKLEDNDFTGAVFEGKYYGPDEFKALETMPS 186
           CMKGMN WLFV SE+IPAA+K + +FQKEKKL DN+  GAVFE K Y P ++K +ETMPS
Sbjct: 75  CMKGMNAWLFVQSEDIPAALKTFINFQKEKKLYDNNLGGAVFEEKLYAPQDYKVIETMPS 134

Query: 187 RAEVYAKMLGLLQAPASSLVGTIQAP 211
           RA+VY  MLG L  PA  LV  +QAP
Sbjct: 135 RADVYGMMLGSLHWPALDLVNALQAP 160

The following BLAST results are available for this feature:

BLAST of PI0022302 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80362	2.3e-85	72.00	50S ribosomal protein L10, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL10 P...	[more]
Q9FY50	3.3e-76	64.04	50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P82139	2.4e-74	63.96	50S ribosomal protein L10, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL10 P...	[more]
B0UHX8	1.3e-16	34.88	50S ribosomal protein L10 OS=Methylobacterium sp. (strain 4-46) OX=426117 GN=rpl...	[more]
B1ZGR8	1.7e-16	34.48	50S ribosomal protein L10 OS=Methylorubrum populi (strain ATCC BAA-705 / NCIMB 1...	[more]

BLAST of PI0022302 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SUB8	1.6e-121	98.70	50S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BDM0	1.6e-121	98.70	50S ribosomal protein L10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488738...	[more]
A0A0A0KLL5	3.5e-121	98.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G176000 PE=3 SV=1	[more]
A0A6J1JII9	6.7e-112	92.21	50S ribosomal protein L10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FTN1	1.3e-110	90.91	50S ribosomal protein L10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of PI0022302 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445837.1	3.3e-121	98.70	PREDICTED: 50S ribosomal protein L10, chloroplastic [Cucumis melo] >KAA0034043.1...	[more]
XP_004143603.1	7.3e-121	98.28	50S ribosomal protein L10, chloroplastic [Cucumis sativus] >KGN50478.1 hypotheti...	[more]
XP_038893368.1	2.3e-119	97.41	50S ribosomal protein L10, chloroplastic [Benincasa hispida]	[more]
KAG6600094.1	6.2e-112	91.34	50S ribosomal protein L10, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]
XP_022990377.1	1.4e-111	92.21	50S ribosomal protein L10, chloroplastic [Cucurbita maxima]	[more]

BLAST of PI0022302 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13510.1	2.4e-77	64.04	Ribosomal protein L10 family protein	[more]
AT3G12370.1	7.4e-47	62.33	Ribosomal protein L10 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043141	Ribosomal protein L10-like domain superfamily	GENE3D	3.30.70.1730		coord: 53..182 e-value: 2.0E-30 score: 107.7
IPR043141	Ribosomal protein L10-like domain superfamily	SUPERFAMILY	160369	Ribosomal protein L10-like	coord: 56..224
None	No IPR available	GENE3D	6.10.250.290		coord: 183..226 e-value: 9.5E-13 score: 49.7
IPR001790	Ribosomal protein L10P	PFAM	PF00466	Ribosomal_L10	coord: 56..151 e-value: 1.2E-20 score: 73.5
IPR001790	Ribosomal protein L10P	PANTHER	PTHR11560	39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL	coord: 37..230
IPR001790	Ribosomal protein L10P	CDD	cd05797	Ribosomal_L10	coord: 55..212 e-value: 2.95054E-50 score: 159.207
IPR022973	Ribosomal protein L10	HAMAP	MF_00362	Ribosomal_L10	coord: 54..214 score: 18.913208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022302.1	PI0022302.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome