PI0000186 (gene) Melon (PI 482460) v1

Overview


Name	PI0000186
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Plant transposase
Location	chr06: 15974770 .. 15975786 (+)
RNA-Seq Expression	PI0000186
Synteny	PI0000186

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCTTGATCATGGCTATGTACGAGGGTTGGGATTTGGTGTGACTACATCGAAGGTATTTACATCAATTCAGAAAGATAAAATCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAGATGTAGATGAGCTGAAAAGTGTGATAGCTTCCTTACTAAAGGACAAGGTAAATTTGTCCTAACACTCTTAAAAGTTTTTAAACTATGTTTTATCGAACATTTTGACATTGTTGTTTCTATAGGAAAAAATAAGTGATCAACAAAATTCGAATAATCCTGTTAAAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGGTAAATTCATTTATAACTTTTTTGTTTATTTATTATTTTAAATTATTACTTTTTGAAATTTTTCTAACCATATTATTGTTGAAAAAGAGTGTTACTACCAACACTCCCCATAAGTGTTTGTTGCTAGATTGGGTTGGTTCAGGAGAAGTCATTGTTGAAGGTAGATGGTTGATAGAACTATTTTTGAATAAAAATATCTATCCTAACTCTCTATAATAAGCTCCAAATACTTATCAATGTCACATTTTTATATAGAATATGATACAAACCCCTTCACAAGCCCTTAGACACAAAAGTAAGCTAAAACAAGCTCCTTGCGGACAAAATTGAATAAACACAAATCCAAGGGCAAATTAGTAATCTCCCAAAGGAATTCAAATCCTTCTTCGCGGCAAAGCTACTTCAGTATCGCATGGCTCAAACGCATCCTGCCTTCACCGCAAGACACTGCCTTCAACCTTGAGCCTCGCGAACACTTCATCCTGCAGAAGTATACATCTTACCTTGTCGAACACTCATTCACCACCAGCTCGCTAACTCTTCATTCAGCTGACTCAAGCTCGCAAGCTTCATCGCATTCATCAGATCACCCAATTCAGCAAAGCACTATCTCCTCGCATGCAATCTGAATAA

mRNA sequence

ATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCTTGATCATGGCTATGTACGAGGGTTGGGATTTGGTGTGACTACATCGAAGGTATTTACATCAATTCAGAAAGATAAAATCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAGATGTAGATGAGCTGAAAAGTGTGATAGCTTCCTTACTAAAGGACAAGGAAAAAATAAGTGATCAACAAAATTCGAATAATCCTGTTAAAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGCTGACTCAAGCTCGCAAGCTTCATCGCATTCATCAGATCACCCAATTCAGCAAAGCACTATCTCCTCGCATGCAATCTGAATAA

Coding sequence (CDS)

ATGTCTTCTTCGAGCAGTATGATTGAAGATGCAATTAGTAGAGTTTTCGGTCTTGATCATGGCTATGTACGAGGGTTGGGATTTGGTGTGACTACATCGAAGGTATTTACATCAATTCAGAAAGATAAAATCATTGCATGTCTTGAAAGAAAATGTAACAACCTAACCTCAGATGTAGATGAGCTGAAAAGTGTGATAGCTTCCTTACTAAAGGACAAGGAAAAAATAAGTGATCAACAAAATTCGAATAATCCTGTTAAAGTACCAACATCGCCACATATTCCTACTCCAATCCTAAATTCCCCACAGCTGACTCAAGCTCGCAAGCTTCATCGCATTCATCAGATCACCCAATTCAGCAAAGCACTATCTCCTCGCATGCAATCTGAATAA

Protein sequence

MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVDELKSVIASLLKDKEKISDQQNSNNPVKVPTSPHIPTPILNSPQLTQARKLHRIHQITQFSKALSPRMQSE

Homology

[Close]

BLAST of PI0000186 vs. ExPASy TrEMBL
Match: A0A5D3DYN2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002050 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.8e-29
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D GYVRGLGFGVT SKV TSI KDK I  LE+KC+NLTSDVD
Sbjct: 102 VASSSSIIDDAISRVLGSDQGYVRGLGFGVTLSKVSTSIHKDKTITSLEKKCDNLTSDVD 161

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+ASLLKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 162 ELKSVVASLLKDKEKTSD-DNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTPHK 217

[Close]

BLAST of PI0000186 vs. ExPASy TrEMBL
Match: A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.5e-28
Identity = 79/116 (68.10%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 2   SSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVDE 61
           +SSSS+I+DAISRV G D  YVRGLGFGVT SKV TSIQKDK I  LE+KC+NLTSDVDE
Sbjct: 319 ASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDE 378

Query: 62  LKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           LKSV+ASLLKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 379 LKSVVASLLKDKEKTSD-DNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTPHK 433

[Close]

BLAST of PI0000186 vs. ExPASy TrEMBL
Match: A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.0e-28
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D  YVRGLGFGVT SKV TSIQKDK I  LE+KC+NLTSDVD
Sbjct: 318 VASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVD 377

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+ASLLKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 378 ELKSVVASLLKDKEKTSD-DNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNTPHK 433

[Close]

BLAST of PI0000186 vs. ExPASy TrEMBL
Match: A0A5A7UVF2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003770 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.7e-28
Identity = 78/117 (66.67%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D  YVRGLGFGVT SKV TSIQKDK I  LE+KC+NLTSDVD
Sbjct: 318 VASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVD 377

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+AS LKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 378 ELKSVVASSLKDKEKTSD-DNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTPHK 433

[Close]

BLAST of PI0000186 vs. ExPASy TrEMBL
Match: A0A5D3DH39 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G001040 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 7.5e-28
Identity = 78/117 (66.67%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D GYVRGLGFGV  SKV TSI KDK I  LERKC+NLTSDVD
Sbjct: 94  VASSSSIIDDAISRVLGPDQGYVRGLGFGVALSKVSTSIHKDKTITSLERKCDNLTSDVD 153

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+AS LKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 154 ELKSVVASSLKDKEKTSD-DNSNHLVKRVPSSAHIRTHTPTPIINSPPSVTTNTPHK 209

[Close]

BLAST of PI0000186 vs. NCBI nr
Match: TYK28558.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D GYVRGLGFGVT SKV TSI KDK I  LE+KC+NLTSDVD
Sbjct: 102 VASSSSIIDDAISRVLGSDQGYVRGLGFGVTLSKVSTSIHKDKTITSLEKKCDNLTSDVD 161

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+ASLLKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 162 ELKSVVASLLKDKEKTSD-DNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTPHK 217

[Close]

BLAST of PI0000186 vs. NCBI nr
Match: KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 135.6 bits (340), Expect = 3.1e-28
Identity = 79/116 (68.10%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 2   SSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVDE 61
           +SSSS+I+DAISRV G D  YVRGLGFGVT SKV TSIQKDK I  LE+KC+NLTSDVDE
Sbjct: 319 ASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVDE 378

Query: 62  LKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           LKSV+ASLLKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 379 LKSVVASLLKDKEKTSD-DNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTPHK 433

[Close]

BLAST of PI0000186 vs. NCBI nr
Match: KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 4.1e-28
Identity = 79/117 (67.52%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D  YVRGLGFGVT SKV TSIQKDK I  LE+KC+NLTSDVD
Sbjct: 318 VASSSSIIDDAISRVLGPDQTYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVD 377

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+ASLLKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 378 ELKSVVASLLKDKEKTSD-DNSNHLVKRVPSSTHIRTPTPTPIINSPPSVTTNTPHK 433

[Close]

BLAST of PI0000186 vs. NCBI nr
Match: KAA0057491.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 1.2e-27
Identity = 78/117 (66.67%), Postives = 89/117 (76.07%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D  YVRGLGFGVT SKV TSIQKDK I  LE+KC+NLTSDVD
Sbjct: 318 VASSSSIIDDAISRVLGPDQAYVRGLGFGVTLSKVSTSIQKDKTITSLEKKCDNLTSDVD 377

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+AS LKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 378 ELKSVVASSLKDKEKTSD-DNSNHLVKRVPSSAHIRTPTPTPIINSPPSVTTNTPHK 433

[Close]

BLAST of PI0000186 vs. NCBI nr
Match: TYK22660.1 (Plant transposase [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 78/117 (66.67%), Postives = 88/117 (75.21%), Query Frame = 0


Query: 1   MSSSSSMIEDAISRVFGLDHGYVRGLGFGVTTSKVFTSIQKDKIIACLERKCNNLTSDVD 60
           ++SSSS+I+DAISRV G D GYVRGLGFGV  SKV TSI KDK I  LERKC+NLTSDVD
Sbjct: 94  VASSSSIIDDAISRVLGPDQGYVRGLGFGVALSKVSTSIHKDKTITSLERKCDNLTSDVD 153

Query: 61  ELKSVIASLLKDKEKISDQQNSNNPVK-VPTSPHI----PTPILNSPQLTQARKLHR 113
           ELKSV+AS LKDKEK SD  NSN+ VK VP+S HI    PTPI+NSP        H+
Sbjct: 154 ELKSVVASSLKDKEKTSD-DNSNHLVKRVPSSAHIRTHTPTPIINSPPSVTTNTPHK 209

The following BLAST results are available for this feature:

BLAST of PI0000186 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000186 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYN2	6.8e-29	67.52	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00...	[more]
A0A5A7TLJ2	1.5e-28	68.10	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003...	[more]
A0A5A7SRN7	2.0e-28	67.52	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00...	[more]
A0A5A7UVF2	5.7e-28	66.67	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00...	[more]
A0A5D3DH39	7.5e-28	66.67	Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00...	[more]

BLAST of PI0000186 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28558.1	1.4e-28	67.52	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0042856.1	3.1e-28	68.10	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0032201.1	4.1e-28	67.52	Plant transposase [Cucumis melo var. makuwa]	[more]
KAA0057491.1	1.2e-27	66.67	Plant transposase [Cucumis melo var. makuwa]	[more]
TYK22660.1	1.5e-27	66.67	Plant transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0000186 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000186.1	PI0000186.1	mRNA