MS015219 (gene) Bitter gourd (TR) v1

Overview


Name	MS015219
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	remorin 4.1-like isoform X2
Location	scaffold2: 1878735 .. 1880765 (-)
RNA-Seq Expression	MS015219
Synteny	MS015219

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAGAAAACGGCGGGGAGGTGGCTGAGAGAACAATTTTCTCGGCAAATGAGTGGAGATAATGAATTATCCGATGACGGAATATTAGAGCACGTGGCCGCCGTCGCAGCAGCGGTCTTTGCGGTGCATTCCGTTAATGAAGACCAATCAGAAATCGCCACACGGAAAATTAACTCCGACCGCCGTGATCGTGAAACGTCGTCGTCGGCGAAGATAAAGTACATCAAGGACGACGACACTCGCCCCCTCGCTCCACGTCCGGCGCCGGATCCTTCCAAAGTTTCCCGGCGGCCCTCCAGTAATTTCTTCTTTGCATTTTCCTCCCCGTTAAAAAATATTTGTTTTATGTTAAATTACAAATTTGACCTATAATTTGGGCTATGTTTTAAATCTCTTGGTAATTTTTTATATTATTCTTTTCAACCCCAAAACTTCCATCATATATATTTTTGTCCTCGAAGTTTTATACCTGTTTCATTTTGATCTCAAAATTTTTGAAATGTGTAACACTAGTATGACAAGAATTAAATTGATCACTTTTTTAAATTCAATAATTAAAATAAACATTATAAAAATTAGAGACCAATTTTTTTTCGAAATTTAAAGGACCAACATAAAACGTATTGAAAAATTCATGAATTAAAATAAGATTTAGAGTTTAATTAAAAAGTTTCTATTGGTCATGATTTCAATATTATTCTAACATATTCTCCATGATTTCAAAATTTTCAATTAAGTCCTTATAATTTAGTTACGTCATCCCACCCCTTGTAACTAAAATATTTTTTAAGCACTTATACAATTTTCATTTTACTCATCTCTAGTGGAAAAGGTTAAATGTTACTTCCTTGACACTAAATAAAAAACAAGTAATGTTATCAACGTCTATGTGGACCAAAATGAATAAATTCAAATTGTAAGGACTAAATTGAAAATTTTAAAGATAGCTAGTACGAATTTCATAATTTCACCTTAGTTTTATCAACAATGATAACACTGTTCAAGTTTTAAGAAACTAAGATGGTAAAAAAAGAAGAATGAATGGATGATTGGATAATTTGATGCCAAATTTGTAATTGAATGTAACTAATGAGATGGTTTCTATGTTAGATAAAGATCCCGGAGAAGGCTCAGATGGGAAACAAAAACAGAAACCAACAGATCAAAAACTAACGGATCCTTCTTCTTCATTATCCATGAGAAAGACTCCAACTTTTTCAGACAACAAACCAGACATCATCTCCGGCAGCAGAAAATTCTCATCACCCCAAAAACCAGCAGTACTTCCAACTCCGACTCGGATTCCGACTCCGAGACCTCCAACTCCGACTCCGACTCCGAGACCTCCAACTCCGCCCATCTCTCGAAAGCCATCGAATTCAACTGGACCACCCGAAACAAAAGAAACTAACCCATCTAATCCAACACAAACAAAAGCAGATTTCTGGGAAAAGGCTGAGATGGCTAAAATCAGAGACAAGTACTCAATTCTTCTCCCTTTTTCTTCCTCTCTCCATAATCAATCTAATTTTATACCACGTTAGATGAATTAAATTTACCTAATCCATTAGCTTAAACTTTTGGGTTGAATGGTAATTTATTCATCCTTGACATGATATTAGAACGAGAGATTGTCTGTGTTGTTGTTTACACATGTCTAAGAGTGGGGAAATTTCCAGGTACGAGAAGGTGAACGAGACAATTTCTTACTGGGAAACCAAGAAGAGGGAGAAAGCCATGCGCAAATTGGAAGAATCACAGGTTCATCATCAGTTTATCTCTGTTTTTCAAAGTTTGTAAATTTTACATATAAATGATTCTGTTTAACCATTGCAGGCGGTGGGAGTGAAGAGGAGGAAGAGGGAAAAAGGAAGAAAAAAGTTCGAGGAGGATATGGAGTTTATAAAGCAAATAGCAGCAGAAGCAAGAGCCAAAGCAGAGGAAAAACGAAGGAACGACACTCTTAAAGTCAAGCAGAAAGCAGATGTTCTCAGAGAAACAGGGGACCTCCCTGTTACTTGTTATTGCTGC

mRNA sequence

GAGAAGAAAACGGCGGGGAGGTGGCTGAGAGAACAATTTTCTCGGCAAATGAGTGGAGATAATGAATTATCCGATGACGGAATATTAGAGCACGTGGCCGCCGTCGCAGCAGCGGTCTTTGCGGTGCATTCCGTTAATGAAGACCAATCAGAAATCGCCACACGGAAAATTAACTCCGACCGCCGTGATCGTGAAACGTCGTCGTCGGCGAAGATAAAGTACATCAAGGACGACGACACTCGCCCCCTCGCTCCACGTCCGGCGCCGGATCCTTCCAAAGTTTCCCGGCGGCCCTCCAATCAAAAACTAACGGATCCTTCTTCTTCATTATCCATGAGAAAGACTCCAACTTTTTCAGACAACAAACCAGACATCATCTCCGGCAGCAGAAAATTCTCATCACCCCAAAAACCAGCAGTACTTCCAACTCCGACTCGGATTCCGACTCCGAGACCTCCAACTCCGACTCCGACTCCGAGACCTCCAACTCCGCCCATCTCTCGAAAGCCATCGAATTCAACTGGACCACCCGAAACAAAAGAAACTAACCCATCTAATCCAACACAAACAAAAGCAGATTTCTGGGAAAAGGCTGAGATGGCTAAAATCAGAGACAAGTACGAGAAGGTGAACGAGACAATTTCTTACTGGGAAACCAAGAAGAGGGAGAAAGCCATGCGCAAATTGGAAGAATCACAGGCGGTGGGAGTGAAGAGGAGGAAGAGGGAAAAAGGAAGAAAAAAGTTCGAGGAGGATATGGAGTTTATAAAGCAAATAGCAGCAGAAGCAAGAGCCAAAGCAGAGGAAAAACGAAGGAACGACACTCTTAAAGTCAAGCAGAAAGCAGATGTTCTCAGAGAAACAGGGGACCTCCCTGTTACTTGTTATTGCTGC

Coding sequence (CDS)

GAGAAGAAAACGGCGGGGAGGTGGCTGAGAGAACAATTTTCTCGGCAAATGAGTGGAGATAATGAATTATCCGATGACGGAATATTAGAGCACGTGGCCGCCGTCGCAGCAGCGGTCTTTGCGGTGCATTCCGTTAATGAAGACCAATCAGAAATCGCCACACGGAAAATTAACTCCGACCGCCGTGATCGTGAAACGTCGTCGTCGGCGAAGATAAAGTACATCAAGGACGACGACACTCGCCCCCTCGCTCCACGTCCGGCGCCGGATCCTTCCAAAGTTTCCCGGCGGCCCTCCAATCAAAAACTAACGGATCCTTCTTCTTCATTATCCATGAGAAAGACTCCAACTTTTTCAGACAACAAACCAGACATCATCTCCGGCAGCAGAAAATTCTCATCACCCCAAAAACCAGCAGTACTTCCAACTCCGACTCGGATTCCGACTCCGAGACCTCCAACTCCGACTCCGACTCCGAGACCTCCAACTCCGCCCATCTCTCGAAAGCCATCGAATTCAACTGGACCACCCGAAACAAAAGAAACTAACCCATCTAATCCAACACAAACAAAAGCAGATTTCTGGGAAAAGGCTGAGATGGCTAAAATCAGAGACAAGTACGAGAAGGTGAACGAGACAATTTCTTACTGGGAAACCAAGAAGAGGGAGAAAGCCATGCGCAAATTGGAAGAATCACAGGCGGTGGGAGTGAAGAGGAGGAAGAGGGAAAAAGGAAGAAAAAAGTTCGAGGAGGATATGGAGTTTATAAAGCAAATAGCAGCAGAAGCAAGAGCCAAAGCAGAGGAAAAACGAAGGAACGACACTCTTAAAGTCAAGCAGAAAGCAGATGTTCTCAGAGAAACAGGGGACCTCCCTGTTACTTGTTATTGCTGC

Protein sequence

EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSDRRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNQKLTDPSSSLSMRKTPTFSDNKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPTPPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVLRETGDLPVTCYCC

Homology

[Close]

BLAST of MS015219 vs. NCBI nr
Match: XP_022151056.1 (remorin 4.1-like isoform X2 [Momordica charantia] >XP_022157121.1 remorin 4.1-like isoform X2 [Momordica charantia])

HSP 1 Score: 531.6 bits (1368), Expect = 4.5e-147
Identity = 294/313 (93.93%), Postives = 295/313 (94.25%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD
Sbjct: 41  EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 100

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN---------------QKLTD 120
           RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN               QKLTD
Sbjct: 101 RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNPGEGSDGKQKQKPTDQKLTD 160

Query: 121 PSSSLSMRKTPTFSDNKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPTPP 180
           PSSSLSMRKTPTFSDNKPDIISGSRKFS PQKPAVLPTPTRIPT RPPTPTPTPRPPTPP
Sbjct: 161 PSSSLSMRKTPTFSDNKPDIISGSRKFSEPQKPAVLPTPTRIPTSRPPTPTPTPRPPTPP 220

Query: 181 ISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKREKA 240
           ISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIR+K EKVNETISYWETKKREKA
Sbjct: 221 ISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRNKSEKVNETISYWETKKREKA 280

Query: 241 MRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVL 299
           MRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVL
Sbjct: 281 MRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVL 340

[Close]

BLAST of MS015219 vs. NCBI nr
Match: XP_022151055.1 (remorin 4.1-like isoform X1 [Momordica charantia] >XP_022157120.1 remorin 4.1-like isoform X1 [Momordica charantia])

HSP 1 Score: 530.8 bits (1366), Expect = 7.6e-147
Identity = 294/315 (93.33%), Postives = 295/315 (93.65%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD
Sbjct: 41  EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 100

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN-----------------QKL 120
           RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN                 QKL
Sbjct: 101 RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNKDPGEGSDGKQKQKPTDQKL 160

Query: 121 TDPSSSLSMRKTPTFSDNKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPT 180
           TDPSSSLSMRKTPTFSDNKPDIISGSRKFS PQKPAVLPTPTRIPT RPPTPTPTPRPPT
Sbjct: 161 TDPSSSLSMRKTPTFSDNKPDIISGSRKFSEPQKPAVLPTPTRIPTSRPPTPTPTPRPPT 220

Query: 181 PPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKRE 240
           PPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIR+K EKVNETISYWETKKRE
Sbjct: 221 PPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRNKSEKVNETISYWETKKRE 280

Query: 241 KAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKAD 299
           KAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKAD
Sbjct: 281 KAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKAD 340

[Close]

BLAST of MS015219 vs. NCBI nr
Match: XP_023542547.1 (proteoglycan 4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-58
Identity = 175/347 (50.43%), Postives = 214/347 (61.67%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EK TAG WL  QF +QMS  NE SDD I E V AVAAA +A+HS+    SEIA RK N+D
Sbjct: 73  EKTTAG-WLGRQFLQQMSRGNEFSDDEI-ERVTAVAAAAYAIHSI--QNSEIARRKKNAD 132

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRR----------------------- 120
               ETSS  K  ++K+D+ RP  PRPAP+P+K+SRR                       
Sbjct: 133 Y--PETSSFPKFTHLKEDN-RPPTPRPAPEPAKLSRRLIDLLKDPEESPVRNVSVTHEQP 192

Query: 121 --PSNQKLTDPSSSLSMRKTPTFSDNKPDI-------------ISGSRKFSSPQKPAVLP 180
                +K TDP +    ++T  FS NKPDI             ISGSR+ + P+KPA + 
Sbjct: 193 KQKPTEKTTDPGNRPYFKET-AFSGNKPDISGSRRTEPEKPSNISGSRR-TEPEKPAGIS 252

Query: 181 TPTRIPTPR-----------PPTPTPTPRPPTPPISRKPSNSTGPPETKETNPSNPTQTK 240
              R    +           P  P   PRPPTP    +P++   P  T +T P +  +TK
Sbjct: 253 GSRRTEPEKSADISGRRRTEPEKPAVVPRPPTP--INRPTDPQKPLPT-QTRPYDSRETK 312

Query: 241 ADFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRRKREKGRKKFEE 299
           AD WEKAEMAKI +++ KVNET+SYWE KKR+KAMRK EESQA GVKR KREKGRKKFEE
Sbjct: 313 ADQWEKAEMAKINERFHKVNETVSYWERKKRDKAMRKYEESQAAGVKRSKREKGRKKFEE 372

[Close]

BLAST of MS015219 vs. NCBI nr
Match: XP_023542546.1 (proteoglycan 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-58
Identity = 175/349 (50.14%), Postives = 214/349 (61.32%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EK TAG WL  QF +QMS  NE SDD I E V AVAAA +A+HS+    SEIA RK N+D
Sbjct: 73  EKTTAG-WLGRQFLQQMSRGNEFSDDEI-ERVTAVAAAAYAIHSI--QNSEIARRKKNAD 132

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRR----------------------- 120
               ETSS  K  ++K+D+ RP  PRPAP+P+K+SRR                       
Sbjct: 133 Y--PETSSFPKFTHLKEDN-RPPTPRPAPEPAKLSRRLIDKDLLKDPEESPVRNVSVTHE 192

Query: 121 ----PSNQKLTDPSSSLSMRKTPTFSDNKPDI-------------ISGSRKFSSPQKPAV 180
                  +K TDP +    ++T  FS NKPDI             ISGSR+ + P+KPA 
Sbjct: 193 QPKQKPTEKTTDPGNRPYFKET-AFSGNKPDISGSRRTEPEKPSNISGSRR-TEPEKPAG 252

Query: 181 LPTPTRIPTPR-----------PPTPTPTPRPPTPPISRKPSNSTGPPETKETNPSNPTQ 240
           +    R    +           P  P   PRPPTP    +P++   P  T +T P +  +
Sbjct: 253 ISGSRRTEPEKSADISGRRRTEPEKPAVVPRPPTP--INRPTDPQKPLPT-QTRPYDSRE 312

Query: 241 TKADFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRRKREKGRKKF 299
           TKAD WEKAEMAKI +++ KVNET+SYWE KKR+KAMRK EESQA GVKR KREKGRKKF
Sbjct: 313 TKADQWEKAEMAKINERFHKVNETVSYWERKKRDKAMRKYEESQAAGVKRSKREKGRKKF 372

[Close]

BLAST of MS015219 vs. NCBI nr
Match: XP_008446417.1 (PREDICTED: FYN-binding protein isoform X1 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 8.6e-58
Identity = 157/298 (52.68%), Postives = 195/298 (65.44%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EK+T G WL  QFSRQMS  NE SDDGI E VAAVAAAVFA+H V E +     +KI   
Sbjct: 40  EKRTFGNWLGRQFSRQMSRGNEFSDDGI-ERVAAVAAAVFAIHLVEESEFSKPLKKI--- 99

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNQKLTDPSSSLSMRKTPTFSD 120
             DR  SS+     I ++D R   PRPAP+P ++ R  S     +P  +    K    ++
Sbjct: 100 --DRPKSSTLPRIRIVEEDNRTPPPRPAPEPDRILRPFSIDVAKNPEEATG-EKPAAKTE 159

Query: 121 NKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPTPPISRKPSNSTGPPETK 180
            +    +G+  F SP  P V              P P PRPPTPPISRKP   T P +T+
Sbjct: 160 QQKQKPTGNITFPSP--PVVYDYSGDRGRTETEKPLPIPRPPTPPISRKP--PTTPIQTR 219

Query: 181 ETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRR 240
                 P +TKAD WEKAE+AKI+++Y+KVNETISYWETKKREKA+RK E SQ +G KR 
Sbjct: 220 ------PEETKADLWEKAELAKIQERYQKVNETISYWETKKREKAIRKFEASQVLGTKRS 279

Query: 241 KREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVLRETGDLPVTCYCC 299
           +REKGRKKFEEDMEFIKQIA EAR+KA+ K++N+ LK  +KAD++R+TGDLPV+CYCC
Sbjct: 280 EREKGRKKFEEDMEFIKQIAGEARSKADRKKKNEILKANRKADIIRQTGDLPVSCYCC 320

[Close]

BLAST of MS015219 vs. ExPASy TrEMBL
Match: A0A6J1DX13 (remorin 4.1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023919 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.2e-147
Identity = 294/313 (93.93%), Postives = 295/313 (94.25%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD
Sbjct: 41  EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 100

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN---------------QKLTD 120
           RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN               QKLTD
Sbjct: 101 RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNPGEGSDGKQKQKPTDQKLTD 160

Query: 121 PSSSLSMRKTPTFSDNKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPTPP 180
           PSSSLSMRKTPTFSDNKPDIISGSRKFS PQKPAVLPTPTRIPT RPPTPTPTPRPPTPP
Sbjct: 161 PSSSLSMRKTPTFSDNKPDIISGSRKFSEPQKPAVLPTPTRIPTSRPPTPTPTPRPPTPP 220

Query: 181 ISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKREKA 240
           ISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIR+K EKVNETISYWETKKREKA
Sbjct: 221 ISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRNKSEKVNETISYWETKKREKA 280

Query: 241 MRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVL 299
           MRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVL
Sbjct: 281 MRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVL 340

[Close]

BLAST of MS015219 vs. ExPASy TrEMBL
Match: A0A6J1DA64 (remorin 4.1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019079 PE=3 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.7e-147
Identity = 294/315 (93.33%), Postives = 295/315 (93.65%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD
Sbjct: 41  EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 100

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN-----------------QKL 120
           RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSN                 QKL
Sbjct: 101 RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNKDPGEGSDGKQKQKPTDQKL 160

Query: 121 TDPSSSLSMRKTPTFSDNKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPT 180
           TDPSSSLSMRKTPTFSDNKPDIISGSRKFS PQKPAVLPTPTRIPT RPPTPTPTPRPPT
Sbjct: 161 TDPSSSLSMRKTPTFSDNKPDIISGSRKFSEPQKPAVLPTPTRIPTSRPPTPTPTPRPPT 220

Query: 181 PPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKRE 240
           PPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIR+K EKVNETISYWETKKRE
Sbjct: 221 PPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEMAKIRNKSEKVNETISYWETKKRE 280

Query: 241 KAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKAD 299
           KAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKAD
Sbjct: 281 KAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKAD 340

[Close]

BLAST of MS015219 vs. ExPASy TrEMBL
Match: A0A1S3BFP8 (FYN-binding protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-58
Identity = 157/298 (52.68%), Postives = 195/298 (65.44%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EK+T G WL  QFSRQMS  NE SDDGI E VAAVAAAVFA+H V E +     +KI   
Sbjct: 40  EKRTFGNWLGRQFSRQMSRGNEFSDDGI-ERVAAVAAAVFAIHLVEESEFSKPLKKI--- 99

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNQKLTDPSSSLSMRKTPTFSD 120
             DR  SS+     I ++D R   PRPAP+P ++ R  S     +P  +    K    ++
Sbjct: 100 --DRPKSSTLPRIRIVEEDNRTPPPRPAPEPDRILRPFSIDVAKNPEEATG-EKPAAKTE 159

Query: 121 NKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPTPPISRKPSNSTGPPETK 180
            +    +G+  F SP  P V              P P PRPPTPPISRKP   T P +T+
Sbjct: 160 QQKQKPTGNITFPSP--PVVYDYSGDRGRTETEKPLPIPRPPTPPISRKP--PTTPIQTR 219

Query: 181 ETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRR 240
                 P +TKAD WEKAE+AKI+++Y+KVNETISYWETKKREKA+RK E SQ +G KR 
Sbjct: 220 ------PEETKADLWEKAELAKIQERYQKVNETISYWETKKREKAIRKFEASQVLGTKRS 279

Query: 241 KREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVLRETGDLPVTCYCC 299
           +REKGRKKFEEDMEFIKQIA EAR+KA+ K++N+ LK  +KAD++R+TGDLPV+CYCC
Sbjct: 280 EREKGRKKFEEDMEFIKQIAGEARSKADRKKKNEILKANRKADIIRQTGDLPVSCYCC 320

[Close]

BLAST of MS015219 vs. ExPASy TrEMBL
Match: A0A1S3BFU9 (FYN-binding protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 5.5e-58
Identity = 157/298 (52.68%), Postives = 196/298 (65.77%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EK+T G WL  QFSRQMS  NE SDDGI E VAAVAAAVFA+H V E +     +KI   
Sbjct: 40  EKRTFGNWLGRQFSRQMSRGNEFSDDGI-ERVAAVAAAVFAIHLVEESEFSKPLKKI--- 99

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNQKLTDPSSSLSMRKTPTFSD 120
             DR  SS+     I ++D R   PRPAP+P ++  RP +    +P  +    K    ++
Sbjct: 100 --DRPKSSTLPRIRIVEEDNRTPPPRPAPEPDRI-LRPFSNVAKNPEEATG-EKPAAKTE 159

Query: 121 NKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPPTPPISRKPSNSTGPPETK 180
            +    +G+  F SP  P V              P P PRPPTPPISRKP   T P +T+
Sbjct: 160 QQKQKPTGNITFPSP--PVVYDYSGDRGRTETEKPLPIPRPPTPPISRKP--PTTPIQTR 219

Query: 181 ETNPSNPTQTKADFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRR 240
                 P +TKAD WEKAE+AKI+++Y+KVNETISYWETKKREKA+RK E SQ +G KR 
Sbjct: 220 ------PEETKADLWEKAELAKIQERYQKVNETISYWETKKREKAIRKFEASQVLGTKRS 279

Query: 241 KREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKVKQKADVLRETGDLPVTCYCC 299
           +REKGRKKFEEDMEFIKQIA EAR+KA+ K++N+ LK  +KAD++R+TGDLPV+CYCC
Sbjct: 280 EREKGRKKFEEDMEFIKQIAGEARSKADRKKKNEILKANRKADIIRQTGDLPVSCYCC 319

[Close]

BLAST of MS015219 vs. ExPASy TrEMBL
Match: A0A6J1G0X6 (remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.9e-56
Identity = 168/338 (49.70%), Postives = 208/338 (61.54%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           EK TAG WL  QF +QMS  NE SDD I E V AVAAA +A+HS+    SEIA R+ N+D
Sbjct: 34  EKTTAG-WLGRQFLQQMSRGNEFSDDEI-ERVTAVAAAAYAIHSI--QNSEIARRRKNAD 93

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSR------------------------ 120
               ETSS  K  ++K+D+ RP  PRPAP+P+K+SR                        
Sbjct: 94  Y--PETSSFPKFTHLKEDN-RPPTPRPAPEPAKLSRRLIDKDHLQDPEQSQRRNVSVTHE 153

Query: 121 ---RPSNQKLTDPSSSLSMRKTPTFSDNKPDI-------------ISGSRKFSSPQKPAV 180
              R   +  TDP S    ++T  FS NKPD              ISGSR+ +  +KPA 
Sbjct: 154 QPKRKPTENTTDPGSRPYFKET-AFSGNKPDTSGSRRTDPEKPSNISGSRR-TETEKPAG 213

Query: 181 LPTPTRIPTPRPPTPTPTPRPPTPPISRKPSNSTGPPETKETNPSNPTQTKADFWEKAEM 240
           +    R    +P  P   PRPPTP    +P++   P  T +T P +  +TKAD WEKAEM
Sbjct: 214 ISGSRRTEPEKPEKPAVVPRPPTP--FNRPTDPQKPLPT-QTRPYDSRETKADQWEKAEM 273

Query: 241 AKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIA 299
           AKI +++ KV ET+SYWE KKR+KA RK +ESQA GVKR KREKG KKFEEDM+FIKQIA
Sbjct: 274 AKINERFHKVIETVSYWERKKRDKARRKYDESQAAGVKRSKREKGIKKFEEDMDFIKQIA 333

[Close]

BLAST of MS015219 vs. TAIR 10
Match: AT1G13920.1 (Remorin family protein )

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-24
Identity = 117/319 (36.68%), Postives = 160/319 (50.16%), Query Frame = 0


Query: 1   EKKTAGRWLREQFSRQMSGDNELSDDGILEHVAAVAAAVFAVHSVNEDQSEIATRKINSD 60
           +KK    WL++QFSRQMSG +     G ++H AAVAA  +A+ +  E   E      +S 
Sbjct: 42  DKKKPSNWLQKQFSRQMSGQS-YDPIGEMDHAAAVAATAYAIATFEETWLE----NYHSG 101

Query: 61  RRDRETSSSAKIKYIKDDDTRPLAPRPAPDPSKVSRRPSNQ---------KLTDPSSSLS 120
                +SS +K        +R     P  +P  +SRR S Q             P+    
Sbjct: 102 LELGPSSSRSK--------SRSEELLPLEEPRSLSRRFSGQLSFIDSETKDHKPPTLKSP 161

Query: 121 MRKT----PTFS-----DNKPDIISGSRKFSSPQKPAVLPTPTRIPTPRPPTPTPTPRPP 180
           MRK+     TFS     D+         K    +KP  +  P RI  P      P   PP
Sbjct: 162 MRKSSSVKKTFSMNLMGDHTKQNQDSEEKHERQRKP--VSEPPRIQPPLRTRSEPRAPPP 221

Query: 181 TPPISRKPSNSTGPPETKETNPSNPTQTK----ADFWEKAEMAKIRDKYEKVNETISYWE 240
            PP    PS    PP   +   S  T  K    AD WEKAE++KI+ +YEK+N  I  WE
Sbjct: 222 PPPPLLSPSPLRLPPRETKRQSSEHTSRKDDSTADAWEKAELSKIKARYEKLNRKIDLWE 281

Query: 241 TKKREKAMRKLEESQAVGVKRRKREKGRKKFEEDMEFIKQIAAEARAKAEEKRRNDTLKV 298
            KKREKA RKL+ S+   +++R R++G ++F ED E+I+QIAA ARA+AE+ R++   KV
Sbjct: 282 AKKREKARRKLDISEQSELEQR-RKRGLQRFREDTEYIEQIAAGARAQAEKDRQSKEFKV 341

[Close]

BLAST of MS015219 vs. TAIR 10
Match: AT1G69325.1 (Remorin family protein )

HSP 1 Score: 72.0 bits (175), Expect = 9.0e-13
Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 193 DFWEKAEMAKIRDKYEKVNETISYWETKKREKAMRKLEESQAVGVKRRKREKGRKKFEED 252
           D W++ E++K R KYEK++E I  WE KKR+KA RKL  ++   V++ K  K  ++F ++
Sbjct: 19  DQWKETEISKSRKKYEKLSEKIVSWEDKKRKKAKRKLHRTER-SVEKTKL-KATQRFRDE 78

Query: 253 MEFIKQIAAEARAKAEEKRRNDTLKVKQKADVLRETGDLPVTC 296
            E I+ I A ARA A E R  + LKVK+KA+++R TG  P TC
Sbjct: 79  NERIEIIVASARAHAYESRIKEELKVKEKANLMRTTGRKPSTC 119

The following BLAST results are available for this feature:

BLAST of MS015219 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151056.1	4.5e-147	93.93	remorin 4.1-like isoform X2 [Momordica charantia] >XP_022157121.1 remorin 4.1-li...	[more]
XP_022151055.1	7.6e-147	93.33	remorin 4.1-like isoform X1 [Momordica charantia] >XP_022157120.1 remorin 4.1-li...	[more]
XP_023542547.1	1.3e-58	50.43	proteoglycan 4-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023542546.1	2.3e-58	50.14	proteoglycan 4-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_008446417.1	8.6e-58	52.68	PREDICTED: FYN-binding protein isoform X1 [Cucumis melo]	[more]

BLAST of MS015219 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015219 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX13	2.2e-147	93.93	remorin 4.1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023919 PE=3 ...	[more]
A0A6J1DA64	3.7e-147	93.33	remorin 4.1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019079 PE=3 ...	[more]
A0A1S3BFP8	4.2e-58	52.68	FYN-binding protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1	[more]
A0A1S3BFU9	5.5e-58	52.68	FYN-binding protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489168 PE=3 SV=1	[more]
A0A6J1G0X6	3.9e-56	49.70	remorin 4.1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449668 PE=3 S...	[more]

BLAST of MS015219 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13920.1	3.0e-24	36.68	Remorin family protein	[more]
AT1G69325.1	9.0e-13	45.63	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 246..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..84
None	No IPR available	PANTHER	PTHR31471	OS02G0116800 PROTEIN	coord: 2..298
None	No IPR available	PANTHER	PTHR31471:SF51	REMORIN FAMILY PROTEIN	coord: 2..298
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 189..293 e-value: 9.8E-21 score: 73.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015219.1	MS015219.1	mRNA