MELO3C033712 (gene) Melon (DHL92) v4

Overview
NameMELO3C033712
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionUnknown protein
Locationchr09: 4659896 .. 4661288 (-)
RNA-Seq ExpressionMELO3C033712
SyntenyMELO3C033712
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAGGTACTTCCCGCGCTTAGATATGTAGGACCAACCATTGCTTTTGACATGGGGATTGATGGTCTCCTTCTTGCACCACATGCACTCCCCCTCGACTTTGTTGGAGAGATTGAACTCCACGTTTTCAATTTTGTAATTCTTGTCGAGGTTTCGACAGCAGGGGTGGAGATCCAGCTCGTCTTTGTCTCTCTTGCAGTGGTACATAAAGCCATTGATTGTCTTTGTGCAGGCGTCGCAAAACTTTTTGCATTGGTCGTGGCAGGCCTTTGGTGGGGTTTTTAAGAACTCGAAGGCGGACTGTGGGAAGAATTCATGAAAAGTTGGCGAGTCTTGTGGAAACATACAAGCTTTGTGAAGATCAAAATTACACTCCTCGCATCGGTAGCGAGGCCCAAAGCCTATTTCCTTGCAGCCATCGCAGGTGTAAGGTTTGAGGTACTTCTTCAGCTGCAATTTATGCTTCAGTTTGTTTGGAGTACACAACTGGTTGGCCATTTTTTTTTCCTCTTGAAGCAAAGTAAAACACCAACGAAACAAGAGGTATAACGATGGATTGCAGGGTAGGGAAGAGTAGAGGAGAGATTTGTGAATATGGGGTTTGCTGGAAGAGTGGATAAGAGATTGGAAAGATTGAACACAGGAATAGCAGAGGTGAAGAGCTTTAAGAAGAATGCAGGAATGGTTATGGGGAATGTTGAATGGAGGCTGTGGGTTTTATATAAGAAATCTGAGGCCATGAGTTTTAGGTAATTTCTTCCGTCTTTGTTCTGAGAAGAAATGCATATAAGTTGTAAAGAAATTTCTAACTCTGGGTTTTGCTTATTCTCAATATTTTCTTTCTTCCTGGGTCCTTACAACTAAATACATTTGATTTTGAGGAGTTTGCTTATTCTCATTAGTTTATTGTTCTTTACATTGTATTTTCACGTCACTTGTGTCTAATATGATGGAATACACACAAATGGATATGCATATGATGTGAATTTGATAGAAATTTCTGTACTCTTGGGATTTTACTCGGTACATTTGTCTTCTCTGCTTTGTTAGTTTGTGTTTTAGTTCATTTAATATTCTAGTTTATTGCTAATCTGACACATTATTTAAACTTTTAGAGAAAATGTGTAAACTCTGTTGTTTGCGGAAGGTTTTGAGAAGGGCCAGCAGTTTCTCTACTATCAATTTTTTAATCTCGCTGTCTGTCGGGAGGTTTTTAGTTCTTTTTTTATTTCTTCTTTTTGTTCTTTTCCATTAAATGAATGAAGATTTTGCATTTGGTTTGCTGTGTACTTTCCCACAACTCTTGGAGCTTTGTTGACTGTTTTACCCCTTCTTCTAAGAGACAAAGATGGGATTTCTTGTATGATTCAATTGGAATTTCCAATTTCAA

mRNA sequence

ATGAACAAGGTACTTCCCGCGCTTAGATATGTAGGACCAACCATTGCTTTTGACATGGGGATTGATGGTCTCCTTCTTGCACCACATGCACTCCCCCTCGACTTTGTTGGAGAGATTGAACTCCACGTTTTCAATTTTGTAATTCTTGTCGAGGTTTCGACAGCAGGGGTGGAGATCCAGCTCGTCTTTGTCTCTCTTGCAGTGGTACATAAAGCCATTGATTGTCTTTGTGCAGGCGTCGCAAAACTTTTTGCATTGGTCGTGGCAGGCCTTTGGCGGACTGTGGGAAGAATTCATGAAAAGTTGGCGAGTCTTGTGGAAACATACAAGCTTTGTGAAGATCAAAATTACACTCCTCGCATCGGTAGCGAGGCCCAAAGCCTATTTCCTTGCAGCCATCGCAGGTGTAAGCAAAGTAAAACACCAACGAAACAAGAGGTATAACGATGGATTGCAGGGTAGGGAAGAGTAGAGGAGAGATTTGTGAATATGGGGTTTGCTGGAAGAGTGGATAAGAGATTGGAAAGATTGAACACAGGAATAGCAGAGGTGAAGAGCTTTAAGAAGAATGCAGGAATGGTTATGGGGAATGTTGAATGGAGGCTGTGGGTTTTATATAAGAAATCTGAGGCCATGAGTTTTAGGTAATTTCTTCCGTCTTTGTTCTGAGAAGAAATGCATATAAGTTGTAAAGAAATTTCTAACTCTGGGTTTTGCTTATTCTCAATATTTTCTTTCTTCCTGGGTCCTTACAACTAAATACATTTGATTTTGAGGAGTTTGCTTATTCTCATTAGTTTATTGTTCTTTACATTGTATTTTCACGTCACTTGTGTCTAATATGATGGAATACACACAAATGGATATGCATATGATGTGAATTTGATAGAAATTTCTGTACTCTTGGGATTTTACTCGGTACATTTGTCTTCTCTGCTTTGTTAGTTTGTGTTTTAGTTCATTTAATATTCTAGTTTATTGCTAATCTGACACATTATTTAAACTTTTAGAGAAAATGTGTAAACTCTGTTGTTTGCGGAAGGTTTTGAGAAGGGCCAGCAGTTTCTCTACTATCAATTTTTTAATCTCGCTGTCTGTCGGGAGGTTTTTAGTTCTTTTTTTATTTCTTCTTTTTGTTCTTTTCCATTAAATGAATGAAGATTTTGCATTTGGTTTGCTGTGTACTTTCCCACAACTCTTGGAGCTTTGTTGACTGTTTTACCCCTTCTTCTAAGAGACAAAGATGGGATTTCTTGTATGATTCAATTGGAATTTCCAATTTCAA

Coding sequence (CDS)

ATGAACAAGGTACTTCCCGCGCTTAGATATGTAGGACCAACCATTGCTTTTGACATGGGGATTGATGGTCTCCTTCTTGCACCACATGCACTCCCCCTCGACTTTGTTGGAGAGATTGAACTCCACGTTTTCAATTTTGTAATTCTTGTCGAGGTTTCGACAGCAGGGGTGGAGATCCAGCTCGTCTTTGTCTCTCTTGCAGTGGTACATAAAGCCATTGATTGTCTTTGTGCAGGCGTCGCAAAACTTTTTGCATTGGTCGTGGCAGGCCTTTGGCGGACTGTGGGAAGAATTCATGAAAAGTTGGCGAGTCTTGTGGAAACATACAAGCTTTGTGAAGATCAAAATTACACTCCTCGCATCGGTAGCGAGGCCCAAAGCCTATTTCCTTGCAGCCATCGCAGGTGTAAGCAAAGTAAAACACCAACGAAACAAGAGGTATAA

Protein sequence

MNKVLPALRYVGPTIAFDMGIDGLLLAPHALPLDFVGEIELHVFNFVILVEVSTAGVEIQLVFVSLAVVHKAIDCLCAGVAKLFALVVAGLWRTVGRIHEKLASLVETYKLCEDQNYTPRIGSEAQSLFPCSHRRCKQSKTPTKQEV
Homology
[Close]
BLAST of MELO3C033712 vs. NCBI nr
Match: XP_023550075.1 (uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 48/92 (52.17%), Postives = 57/92 (61.96%), Query Frame = 0 

Query: 1  MNKVLPALRYVGPTIAFDMGIDGLLLAPHALPLDFVGEIELHVFNFVILVEVSTAGVEIQ 60
          MN V+ A+R VGP IA         LAPHALP   + EIELHVFN V + EVS A VE+Q
Sbjct: 1  MNMVVAAVRDVGPPIASAAVFGAPTLAPHALPFHLLVEIELHVFNLVTIFEVSAAWVEVQ 60

Query: 61 LVFVSLAVVHKAIDCLCAGVAKLFALVVAGLW 93
          ++F  LAV H+AID   A VA  + LV A  W
Sbjct: 61 VIF--LAVEHEAIDGFSASVAPYYGLVAAFWW 90

[Close]
BLAST of MELO3C033712 vs. NCBI nr
Match: XP_023550074.1 (uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 48/92 (52.17%), Postives = 57/92 (61.96%), Query Frame = 0 

Query: 1  MNKVLPALRYVGPTIAFDMGIDGLLLAPHALPLDFVGEIELHVFNFVILVEVSTAGVEIQ 60
          MN V+ A+R VGP IA         LAPHALP   + EIELHVFN V + EVS A VE+Q
Sbjct: 1  MNMVVAAVRDVGPPIASAAVFGAPTLAPHALPFHLLVEIELHVFNLVTIFEVSAAWVEVQ 60

Query: 61 LVFVSLAVVHKAIDCLCAGVAKLFALVVAGLW 93
          ++F  LAV H+AID   A VA  + LV A  W
Sbjct: 61 VIF--LAVEHEAIDGFSASVAPYYGLVAAFWW 90

[Close]
BLAST of MELO3C033712 vs. NCBI nr
Match: KAG6578700.1 (hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-05
Identity = 45/96 (46.88%), Postives = 54/96 (56.25%), Query Frame = 0 

Query: 1  MNKVLPALRYVGPTI----AFDMGIDGLLLAPHALPLDFVGEIELHVFNFVILVEVSTAG 60
          MN V+ A+R V P I          +  +LAP+ALP     EIELHVFN V   EVS A 
Sbjct: 1  MNMVVAAVRDVRPPIVSVSVSAAVFEAPILAPYALPFHLHVEIELHVFNLVTFFEVSAAW 60

Query: 61 VEIQLVFVSLAVVHKAIDCLCAGVAKLFALVVAGLW 93
          V++Q  F  LAV H+AID   A VA  +ALV A  W
Sbjct: 61 VKVQFRF--LAVEHEAIDGFSASVAPHYALVAAFWW 94

[Close]
BLAST of MELO3C033712 vs. ExPASy TrEMBL
Match: A0A0A0KU92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G516570 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 75/92 (81.52%), Postives = 78/92 (84.78%), Query Frame = 0 

Query: 1  MNKVLPALRYVGPTIAFDMGIDGLLLAPHALPLDFVGEIELHVFNFVILVEVSTAGVEIQ 60
          MN VLPALRYVGPTI   MGIDG LLAPHALPLDF+ EIELHVFNFVI V+VSTA VEIQ
Sbjct: 1  MNMVLPALRYVGPTIGLAMGIDGPLLAPHALPLDFLVEIELHVFNFVIPVQVSTARVEIQ 60

Query: 61 LVFVSLAVVHKAIDCLCAGVAKLFALVVAGLW 93
          L F  LAVVHKAID LCAGVAKLFA+V AG W
Sbjct: 61 LDFDFLAVVHKAIDRLCAGVAKLFAVVAAGPW 92

[Close]
BLAST of MELO3C033712 vs. ExPASy TrEMBL
Match: A0A0A0KNV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517075 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25
Identity = 71/92 (77.17%), Postives = 74/92 (80.43%), Query Frame = 0 

Query: 1  MNKVLPALRYVGPTIAFDMGIDGLLLAPHALPLDFVGEIELHVFNFVILVEVSTAGVEIQ 60
          MN VLPALRYVGPTIA  M  DG LLAPHALPLDF+ EIE HVFN VI VEVSTAGVEIQ
Sbjct: 1  MNMVLPALRYVGPTIALAMAFDGPLLAPHALPLDFLVEIEHHVFNLVIPVEVSTAGVEIQ 60

Query: 61 LVFVSLAVVHKAIDCLCAGVAKLFALVVAGLW 93
          ++F  LAVVHKAID  CAGVA  FA VVAG W
Sbjct: 61 VIF--LAVVHKAIDRFCAGVANPFAFVVAGPW 90

The following BLAST results are available for this feature:
BLAST of MELO3C033712 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023550075.11.5e-1052.17uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023550074.11.5e-1052.17uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6578700.11.1e-0546.88hypothetical protein SDJN03_23148, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MELO3C033712 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C033712 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KU921.3e-2881.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G516570 PE=4 SV=1[more]
A0A0A0KNV71.0e-2577.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517075 PE=4 SV=1[more]
BLAST of MELO3C033712 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C033712.1MELO3C033712.1mRNA