MELO3C025121 (gene) Melon (DHL92) v4

Overview
NameMELO3C025121
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionMagnesium-chelatase subunit chID
Locationchr06: 10610554 .. 10610728 (+)
RNA-Seq ExpressionMELO3C025121
SyntenyMELO3C025121
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCCCAGACCTCACGACCACCGTCCTCTTGTACAGTCCTCGTCACCACCGTGCTCAGTCTTACCACCATCCACGAATCTCCAACTCTGAAGACCACGACTGCCAACATCTTTCTAACCAAGTCGCGTCACCACCGTTGCACCGTCCCAGATCGTCCCAGATCTAGCGTTTCTTTG

mRNA sequence

TGCCCAGACCTCACGACCACCGTCCTCTTGTACAGTCCTCGTCACCACCGTGCTCAGTCTTACCACCATCCACGAATCTCCAACTCTGAAGACCACGACTGCCAACATCTTTCTAACCAAGTCGCGTCACCACCGTTGCACCGTCCCAGATCGTCCCAGATCTAGCGTTTCTTTG

Coding sequence (CDS)

GCCCAGACCTCACGACCACCGTCCTCTTGTACAGTCCTCGTCACCACCGTGCTCAGTCTTACCACCATCCACGAATCTCCAACTCTGAAGACCACGACTGCCAACATCTTTCTAACCAAGTCGCGTCACCACCGTTGCACCGTCCCAGATCGTCCCAGATCTAGCGTTTCTTTG

Protein sequence

AQTSRPPSSCTVLVTTVLSLTTIHESPTLKTTTANIFLTKSRHHRCTVPDRPRSSVSL
Homology
[Close]
BLAST of MELO3C025121 vs. NCBI nr
Match: KAA0062873.1 (magnesium-chelatase subunit chID [Cucumis melo var. makuwa] >TYK22505.1 magnesium-chelatase subunit chID [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 2  QTSRPPSSCTVLVTTVLSLTTIHESPTLKTTTANIFLTKSRHHRCTVPDRPRSSVSL 59
          Q+S PP  C+V        TTIHESPTLKTTT  I LTKSRHHRC VPDRPRSSVSL
Sbjct: 12 QSSPPP--CSV-------FTTIHESPTLKTTTTKICLTKSRHHRCIVPDRPRSSVSL 59

[Close]
BLAST of MELO3C025121 vs. ExPASy TrEMBL
Match: A0A5D3DG24 (Magnesium-chelatase subunit chID OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00020 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.9e-09
Identity = 40/57 (70.18%), Postives = 42/57 (73.68%), Query Frame = 0 

Query: 2  QTSRPPSSCTVLVTTVLSLTTIHESPTLKTTTANIFLTKSRHHRCTVPDRPRSSVSL 59
          Q+S PP  C+V        TTIHESPTLKTTT  I LTKSRHHRC VPDRPRSSVSL
Sbjct: 12 QSSPPP--CSV-------FTTIHESPTLKTTTTKICLTKSRHHRCIVPDRPRSSVSL 59

The following BLAST results are available for this feature:
BLAST of MELO3C025121 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062873.11.2e-0870.18magnesium-chelatase subunit chID [Cucumis melo var. makuwa] >TYK22505.1 magnesiu... [more]
BLAST of MELO3C025121 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C025121 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DG245.9e-0970.18Magnesium-chelatase subunit chID OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
BLAST of MELO3C025121 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C025121.1MELO3C025121.1mRNA