MC01g1489 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1489
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLeucine-rich repeat protein kinase family protein
LocationMC01: 19293619 .. 19293948 (+)
RNA-Seq ExpressionMC01g1489
SyntenyMC01g1489
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATCTCCGAACTGCCATTTTCACCTCCTAATAACATCGTCACTTCCACTCCCAAGGTTCAGAGGGTATCCAAATACACTTCGGACAGACTGCTGGAGAAATTCTTCGATGCCACAGAATTTGGGTTCGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTCCAACGCAATGTCTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCAAAGGAGACTCGAGACTCTGTTGAGCTCGAGGCAAAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTTAATCACACCACTTTCTCTCTCTCTCTATCTAATTAATTTA

mRNA sequence

ATGTCCATCTCCGAACTGCCATTTTCACCTCCTAATAACATCGTCACTTCCACTCCCAAGGTTCAGAGGGTATCCAAATACACTTCGGACAGACTGCTGGAGAAATTCTTCGATGCCACAGAATTTGGGTTCGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTCCAACGCAATGTCTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCAAAGGAGACTCGAGACTCTGTTGAGCTCGAGGCAAAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTTAATCACACCACTTTCTCTCTCTCTCTATCTAATTAATTTA

Coding sequence (CDS)

ATGTCCATCTCCGAACTGCCATTTTCACCTCCTAATAACATCGTCACTTCCACTCCCAAGGTTCAGAGGGTATCCAAATACACTTCGGACAGACTGCTGGAGAAATTCTTCGATGCCACAGAATTTGGGTTCGATTACGAGACAAGTGGCCTCTGGTCTCCCCCTCTCCAACGCAATGTCTATTTGAGCTCTTCGGGTCAAGTTTTCAATCAAACGGATTTGCAAAGGAGACTCGAGACTCTGTTGAGCTCGAGGCAAAAAAGTTGTTTCAAATTCAGAGTAAGCTGCTTAATCACACCACTTTCTCTCTCTCTCTATCTAATTAATTTA

Protein sequence

MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGQVFNQTDLQRRLETLLSSRQKSCFKFRVSCLITPLSLSLYLINL
Homology
BLAST of MC01g1489 vs. NCBI nr
Match: XP_038892892.1 (uncharacterized protein LOC120081796 [Benincasa hispida])

HSP 1 Score: 151 bits (382), Expect = 5.48e-45
Identity = 81/107 (75.70%), Postives = 90/107 (84.11%), Query Frame = 0

Query: 1   MSISELPFSPPNNIVTS---TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQ 60
           MSI +LPFSP N I TS   TPKVQRVSK TSDRLL+KFFDATEFGFDYETSGLWSPPLQ
Sbjct: 1   MSIPQLPFSPSNFIATSNNNTPKVQRVSKSTSDRLLQKFFDATEFGFDYETSGLWSPPLQ 60

Query: 61  RNVYLSSSGQVFNQTDLQRRLETLLSSRQ---KSCFKFRVS-CLITP 100
           R+VYLSSSGQVFNQTDL  +L+T+L+SR+   KSCFKFRV  C + P
Sbjct: 61  RSVYLSSSGQVFNQTDLHTKLQTVLNSRRRRHKSCFKFRVFWCSVRP 107

BLAST of MC01g1489 vs. NCBI nr
Match: KAE8647723.1 (hypothetical protein Csa_003961 [Cucumis sativus])

HSP 1 Score: 140 bits (353), Expect = 9.34e-41
Identity = 73/99 (73.74%), Postives = 79/99 (79.80%), Query Frame = 0

Query: 1  MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNV 60
          MSI ELPFSP N      PKVQRVSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR V
Sbjct: 1  MSIPELPFSPSN------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTV 60

Query: 61 YLSSSGQVFNQTDLQRRLETLLSSRQ---KSCFKFRVSC 96
          YL+SSGQV NQTDL  +L+T+L+SR    KSCFKFR  C
Sbjct: 61 YLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRFKC 93

BLAST of MC01g1489 vs. NCBI nr
Match: KAG6581370.1 (hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140 bits (352), Expect = 1.64e-40
Identity = 75/99 (75.76%), Postives = 84/99 (84.85%), Query Frame = 0

Query: 1  MSISELPFSPPNNIVTS-TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRN 60
          MSI ELPFSP N I TS TP VQ+VSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR+
Sbjct: 1  MSIPELPFSPSNFIATSHTPTVQKVSKATSDRLLQKFFDATEFGFDYERSGLWSPPLQRS 60

Query: 61 VYLSSSGQVFNQTDLQRRLETLLSSRQK---SC-FKFRV 94
          VYLS+SG+VFNQ DL R+LE++LSSR+K    C FKFRV
Sbjct: 61 VYLSASGEVFNQADLHRKLESVLSSRRKREEKCRFKFRV 99

BLAST of MC01g1489 vs. NCBI nr
Match: KAG7034657.1 (hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (349), Expect = 3.76e-39
Identity = 75/100 (75.00%), Postives = 84/100 (84.00%), Query Frame = 0

Query: 1   MSISELPFSPPNNIVTS-TPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRN 60
           MSI ELPFSP N I TS TP VQ+VSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR+
Sbjct: 1   MSIPELPFSPSNFIATSHTPTVQKVSKATSDRLLQKFFDATEFGFDYERSGLWSPPLQRS 60

Query: 61  VYLSSSGQVFNQTDLQRRLETLLSSRQK---SC-FKFRVS 95
           VYLS+SG+VFNQ DL R+LE++LSSR+K    C FKFR S
Sbjct: 61  VYLSASGEVFNQADLHRKLESVLSSRRKREEKCRFKFRGS 100

BLAST of MC01g1489 vs. NCBI nr
Match: KAG7026513.1 (hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124 bits (311), Expect = 2.78e-34
Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 0

Query: 16 TSTPK-VQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNVYLSSSGQVFNQTDL 75
          T+TPK VQRV K TSDRLL+KF DATEFGFDY+TSGLWSPPLQR VYLSSSG+VFN TDL
Sbjct: 6  TATPKLVQRVPKSTSDRLLQKFCDATEFGFDYDTSGLWSPPLQRTVYLSSSGRVFNPTDL 65

Query: 76 QRRLETLLSS----RQKSCFKFRVSCL 97
          QR+LE +LSS    R+ SCFKFR + L
Sbjct: 66 QRKLENVLSSDRSRRETSCFKFRKALL 92

BLAST of MC01g1489 vs. ExPASy TrEMBL
Match: A0A0A0KLQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 1.78e-40
Identity = 73/97 (75.26%), Postives = 79/97 (81.44%), Query Frame = 0

Query: 1  MSISELPFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRNV 60
          MSI ELPFSP N      PKVQRVSK TSDRLL+KFFDATEFGFDYE SGLWSPPLQR V
Sbjct: 1  MSIPELPFSPSN------PKVQRVSKSTSDRLLQKFFDATEFGFDYERSGLWSPPLQRTV 60

Query: 61 YLSSSGQVFNQTDLQRRLETLLSSRQ---KSCFKFRV 94
          YL+SSGQV NQTDL  +L+T+L+SR    KSCFKFRV
Sbjct: 61 YLTSSGQVLNQTDLHTKLQTVLNSRSRTHKSCFKFRV 91

BLAST of MC01g1489 vs. ExPASy TrEMBL
Match: A0A2I4H1F6 (uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 2.58e-24
Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MSISELPFSP----PNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPL 60
           MSI E PFS     P+   TS+ +V+ VSK+ SDRL++KF+D +EFGFDYE SGLWSPP+
Sbjct: 1   MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 60

Query: 61  QRNVYLSSSGQVFNQTDLQRRLETLLSSRQKS------CFKFRVSC 96
           QR V++SSSG++F + D+  +L + L   ++       CF   V C
Sbjct: 61  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLVCC 106

BLAST of MC01g1489 vs. ExPASy TrEMBL
Match: A0A2I4H1H1 (uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 2.97e-24
Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MSISELPFSP----PNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPL 60
           MSI E PFS     P+   TS+ +V+ VSK+ SDRL++KF+D +EFGFDYE SGLWSPP+
Sbjct: 1   MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 60

Query: 61  QRNVYLSSSGQVFNQTDLQRRLETLLSSRQKS------CFKFRVSC 96
           QR V++SSSG++F + D+  +L + L   ++       CF   V C
Sbjct: 61  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLVCC 106

BLAST of MC01g1489 vs. ExPASy TrEMBL
Match: A0A2I4H1I2 (uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012687 PE=4 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 6.41e-24
Identity = 50/106 (47.17%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MSISELPFSP----PNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPL 60
           MSI E PFS     P+   TS+ +V+ VSK+ SDRL++KF+D +EFGFDYE SGLWSPP+
Sbjct: 1   MSIPESPFSSSSPSPSLPQTSSGRVELVSKFVSDRLVQKFYDVSEFGFDYEQSGLWSPPV 60

Query: 61  QRNVYLSSSGQVFNQTDLQRRLETLLSSRQKS------CFKFRVSC 96
           QR V++SSSG++F + D+  +L + L   ++       CF   V C
Sbjct: 61  QRTVFMSSSGKIFTEADILSKLRSALQRHRRGRKHRSLCFNVLVCC 106

BLAST of MC01g1489 vs. ExPASy TrEMBL
Match: A0A6P5XB47 (uncharacterized protein LOC111281365 OS=Durio zibethinus OX=66656 GN=LOC111281365 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.92e-23
Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 1  MSISEL-PFSPPNNIVTSTPKVQRVSKYTSDRLLEKFFDATEFGFDYETSGLWSPPLQRN 60
          MS SE+ P SPPN    S  KVQ VSK  SDRLLEKFFD +E+ FDYE SGLWSPP++R+
Sbjct: 1  MSNSEVFPSSPPNLPEPSPVKVQMVSKSVSDRLLEKFFDVSEYNFDYEKSGLWSPPVRRS 60

Query: 61 VYLSSSGQVFNQTDLQRRLETLL----SSRQKSCF 90
           +LSS+G++F + ++  R ++++    S R+  CF
Sbjct: 61 AFLSSTGRIFTEQEMHERFKSVMDRRRSRRRNICF 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038892892.15.48e-4575.70uncharacterized protein LOC120081796 [Benincasa hispida][more]
KAE8647723.19.34e-4173.74hypothetical protein Csa_003961 [Cucumis sativus][more]
KAG6581370.11.64e-4075.76hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7034657.13.76e-3975.00hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG7026513.12.78e-3474.71hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A0A0KLQ81.78e-4075.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519730 PE=4 SV=1[more]
A0A2I4H1F62.58e-2447.17uncharacterized protein LOC109012687 isoform X3 OS=Juglans regia OX=51240 GN=LOC... [more]
A0A2I4H1H12.97e-2447.17uncharacterized protein LOC109012687 isoform X2 OS=Juglans regia OX=51240 GN=LOC... [more]
A0A2I4H1I26.41e-2447.17uncharacterized protein LOC109012687 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
A0A6P5XB474.92e-2351.58uncharacterized protein LOC111281365 OS=Durio zibethinus OX=66656 GN=LOC11128136... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34287:SF2OS06G0551500 PROTEINcoord: 15..92
NoneNo IPR availablePANTHERPTHR34287OS06G0551500 PROTEIN-RELATEDcoord: 15..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1489.1MC01g1489.1mRNA