Lsi05G005800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ribonuclease 3-like protein 2
Location	chr05: 7180075 .. 7183918 (-)
RNA-Seq Expression	Lsi05G005800
Synteny	Lsi05G005800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCCATATAATTTAAATTATTGGGTTTATAATTCTTTAAATTTTAGATTTAGGGGGCAACATTGGTTTGGATTGAATGATTAAACTAAAAATTGTTGGGTTTGAATTTGAGTTGAAATTTGAGTCTTGACCAGTTGAACTCAACTAAGATCAAAAGAAAAGAGACAAAGGAAATCAGGTTTTGTTTTGAAGTAGCAGCCCAGCCCCTGGCCCCTTCCCTCACAATTTCTCTCTCTCTCTCCCCGATCTCAAGAAGCCGCCGCGCGCAGCCCCTCTCCGTCGCAGTCCTCAGATCACCGCCGCCGGAGAGGTATCAGTTCTCTTTCGTTGCCGCCGCCGCTGTTGTACTCCTACTTTCAGCTTCAGGAAGATGGAATCCTCCGTCGTAGCAGCTGAGCGCATTCTTTCCTATAATTTCAAGAACAAGAAGCTTCTAGAAGAAGCCTTCACCCACTCCTCCTACCTCGACTCTGCCTCCTATGAGCGCCTCGAGTTTATCGGCGATTCAGCTATTGGCCTCGCTATTACCAATTACTTCTTTCTTGCTTATCCGGACCTCCATCAGGGCCAACTATCTTTACTTAGGGCTGCTAACATTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCGCCATGGATTGTATAACTATGTTAGACGCAACGCCGCCGCTCTCGATGATAAGGTTCTCAAATTAACCTTCGCTTTTCGTTTGTTCTCTTTCTATTTGTGCCAACCAGCTTTGATTTTCCCCTGATTTTAACTTTATTTCCGTTTTTTGATTGTCTAGGTTAGAGAGTTTGTCGATTCCGTCGCCTTAGAAGACAACTCAGTAGTTCCGTATGGTGGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTAGCTGGTGCTGTATATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGGTGAGTTCTTAGTTACATTTGAAGTATGATTATTACTACTTTACTAGCTAGACACCAATTAGTTTTTTTTGTTTTCAATCTTTTGTAGATTATTAGGGGTTTGTTAGAGCCTATCTATACTCTTGAAGACTTACAGGTAGAGCCCCAACCTGTAACTGTGCTCTTTGAAATTTGCCAAAAAAATGGGAAGCAGGTAGATATCAAGAATTGGAAAAACAGTACGAAGAACATCGCAAGTGTCTATGTCGATGGTAATTTTGTTGCTTCCGGTTCTTCAATGCAAAAGGAAATTGCAAGGCTTAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAAAATTAGAACAGTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAACATAAGCTACATGATTTTTGTTGCAAGAAAAAGTGGCCGAAACCAAACTACAGGTATATGATATTTGAGATGTTACATACTTGCATTGTTTGAACTTTGGACTCTGAATTAGGAGGTAGTTTATCTGTTGTAGTTGTAGATTTTCCATTTGCAAGTGTGCACTCTAACTTATATATTTGCTTTCTAACCAAGTGGTAAATTGAATTCTTCAATAATTTAGAATGAAATGCACTTTTTTTAAAGCTTGCCTGCTTCAATAGTAATCTTGAAGATTATAATCTTATATCTTCATCAAACTACTTTCAATCCTTCACTTCACTTCATGAAAATGTTCTTTTATCTCAAATTTTAAGACACTTTTTAGTGGTCACTGGTCAATACTCACCTGCACTGGCTTCTGTTTTCTTTTGTAAGTACCTGCACATGTGAGGAAAATACGTAGATTGTATGGGTCCTATGGAATATTGTTTGTTAGAGCGTCTCGGAGAGTAACGTACATATACCATTTTGGGCAGTAGGGGAAATTATCTTTTGGCTAAATCATTTTGTAATTGTTCTCTGTATGAGATCTTGGAGAGGAAGGGGAGCGGTGTCGAATTCTCCCCCTACTTGTTGATAAACAAATTGAGGCTAAAGCCTATCTATCACATTTACTTACCATATAGTTATTTGACTATCTTTTTCCCTTTCTCCGTATCCTCCTTTTTTCGAATGTGTTGTAGCACTAACTACTTTATGGATTTCTTATTTGCAGTACTGAGAAAGATTTAGGACCTTCACATGAAAGGAAATTTGTTTGCTCTGTTAAAATTTCCACTTCTTCTGGTACGCTCTATATGATGGGAGATGAGAAGTCAAGAGTAAAGGATGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGCTTTACAGGAAAGAAACTATCTCTAATTCATATATATATATTAATTATTCAATAGGGCAGAACCCGAGTTCCCTTGAACCCAATCAATTCCTATCTCCAATTCCCTTGAACCAAACGACTCCTAAAACAAAGTTAGAGGCTATCTCCTACCGACCGACAACTAGGAGAAGAAATGTAGAAATGAAGGAGAGATCAAATGACTTTTTCTTTCTTTTCGCCTAAAAAAAATGAACTGCTTCCAGACTTTTTATATGGTCTGTACAATGTGGTAGATCATTTTATTTATCGAGTTGAAAGTAACTTTACTTATTCCTTATGTCAACAAAATCACAAAAGAATTTCGTGTTTCAATTCACCAACTTCTTCTTTTGTCCAATCAATTTCTTAACTTGAATCATAGTATCTCGAAACCTAGTCAAATTTATCTTCAAATTCTGCCCATCTATATAGATAGCTCTACTAGCAAAGTAACCCTTGTCAAATATTGATTGAGGGTCTTTAATAACCGTATGATTTTCCCCATATTTATCCCATAAAGAACTCTCCTTTGCCTCAATCTTATACTCCAAATACTCAAGCTCCATCTCAGCCGCTGGCTGCCCAAACAAAAAGGTAGAAGGCCAATCAAGCCCCAACGGCACCACCTGCACGACCACCGCTCCGGCCGCCAAAAACACCTCATTTGTCAGACCGGCCCCATGCGCCCCAACGATCACACTACACATGTTAACAACCGACGAAAACTTGTCCAAATTCGACATTCTTTGTGGCGTTGTCGTCATCACTTCGAACCCAACTTCCTTCATCATCTCAACCATTTCCCCTTCATTCGAAAACCTCCTTGATTTTTGACGTGATATCAACATTACCATTGGCTTTTTCCCACTCACGATGATTTCCCTCACATTCCTCACTTTTAAATTGTATGTTTGTCTTAGGAAACTCCGAAAGTCTGACATCGAATAACCTCCTGGAATATCGGTGTTGTTCAACGATAAAATGTTGTGGAACTTGAGTCCTATGATGCCTCCATTGAAGCAGTGAACAGCTCCATCTTCAGCTGGATTTATGACATTGTAACGAGATAAACTGGAGAGAATTCGGTTGTATTTTCGGACCCACCAAGGTTTGTGATCGGTAACAAGAAACCGAACCCGAGTTCGTAAGTGGTAAGAAGTGATGAACAAAGGAATGATGGTCTCGTCGAAGTCATGGAATAGGTTTCCGGTGAAGCCGCCGGTGGAGAAGATGAGGACAGGAACATTATGGATGAATTGACAAAGAGGTAAAAGGGTTTTGTTTGGTTGGAATATTATTTGAAGTGGAGTAACATCTCTTAAGGTAATTTTGTCTTCTTGTCTTGCATATGGATGAATTGAGATTGGAGAAATATTTGTTTGTTGAGTGTCATTATTGGTTGAGATGTAAAATTTAAGGTTGGTGTTGTTGATTCTTGTTGGGTTGTTTGTCAAACACACTTTGGAATGCAAATCTGTGTGACAAGAAAATCCTGTTTTTTGTAGTTGCTTACGATCCTCACCTACATGTAACCAATCAACAAATAATATTTAACTTCACTACGTTGT

mRNA sequence

GATCCATATAATTTAAATTATTGGGTTTATAATTCTTTAAATTTTAGATTTAGGGGGCAACATTGGTTTGGATTGAATGATTAAACTAAAAATTGTTGGGTTTGAATTTGAGTTGAAATTTGAGTCTTGACCAGTTGAACTCAACTAAGATCAAAAGAAAAGAGACAAAGGAAATCAGGTTTTGTTTTGAAGTAGCAGCCCAGCCCCTGGCCCCTTCCCTCACAATTTCTCTCTCTCTCTCCCCGATCTCAAGAAGCCGCCGCGCGCAGCCCCTCTCCGTCGCAGTCCTCAGATCACCGCCGCCGGAGAGGTATCAGTTCTCTTTCGTTGCCGCCGCCGCTGTTGTACTCCTACTTTCAGCTTCAGGAAGATGGAATCCTCCGTCGTAGCAGCTGAGCGCATTCTTTCCTATAATTTCAAGAACAAGAAGCTTCTAGAAGAAGCCTTCACCCACTCCTCCTACCTCGACTCTGCCTCCTATGAGCGCCTCGAGTTTATCGGCGATTCAGCTATTGGCCTCGCTATTACCAATTACTTCTTTCTTGCTTATCCGGACCTCCATCAGGGCCAACTATCTTTACTTAGGGCTGCTAACATTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCGCCATGGATTGTATAACTATGTTAGACGCAACGCCGCCGCTCTCGATGATAAGGTTAGAGAGTTTGTCGATTCCGTCGCCTTAGAAGACAACTCAGTAGTTCCGTATGGTGGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTAGCTGGTGCTGTATATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGTTAGAGCCTATCTATACTCTTGAAGACTTACAGGTAGAGCCCCAACCTGTAACTGTGCTCTTTGAAATTTGCCAAAAAAATGGGAAGCAGGTAGATATCAAGAATTGGAAAAACAGTACGAAGAACATCGCAAGTGTCTATGTCGATGGTAATTTTGTTGCTTCCGGTTCTTCAATGCAAAAGGAAATTGCAAGGCTTAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAAAATTAGAACAGTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAACATAAGCTACATGATTTTTGTTGCAAGAAAAAGTGGCCGAAACCAAACTACAGTACTGAGAAAGATTTAGGACCTTCACATGAAAGGAAATTTGTTTGCTCTGTTAAAATTTCCACTTCTTCTGGTACGCTCTATATGATGGGAGATGAGAAGTCAAGAGTAAAGGATGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGCTTTACAGGAAAGAAACTATCTCTAATTCATATATATATATTAATTATTCAATAGGGCAGAACCCGAGTTCCCTTGAACCCAATCAATTCCTATCTCCAATTCCCTTGAACCAAACGACTCCTAAAACAAAGTTAGAGGCTATCTCCTACCGACCGACAACTAGGAGAAGAAATGTAGAAATGAAGGAGAGATCAAATGACTTTTTCTTTCTTTTCGCCTAAAAAAAATGAACTGCTTCCAGACTTTTTATATGGTCTGTACAATGTGGTAGATCATTTTATTTATCGAGTTGAAAGTAACTTTACTTATTCCTTATGTCAACAAAATCACAAAAGAATTTCGTGTTTCAATTCACCAACTTCTTCTTTTGTCCAATCAATTTCTTAACTTGAATCATAGTATCTCGAAACCTAGTCAAATTTATCTTCAAATTCTGCCCATCTATATAGATAGCTCTACTAGCAAAGTAACCCTTGTCAAATATTGATTGAGGGTCTTTAATAACCGTATGATTTTCCCCATATTTATCCCATAAAGAACTCTCCTTTGCCTCAATCTTATACTCCAAATACTCAAGCTCCATCTCAGCCGCTGGCTGCCCAAACAAAAAGGTAGAAGGCCAATCAAGCCCCAACGGCACCACCTGCACGACCACCGCTCCGGCCGCCAAAAACACCTCATTTGTCAGACCGGCCCCATGCGCCCCAACGATCACACTACACATGTTAACAACCGACGAAAACTTGTCCAAATTCGACATTCTTTGTGGCGTTGTCGTCATCACTTCGAACCCAACTTCCTTCATCATCTCAACCATTTCCCCTTCATTCGAAAACCTCCTTGATTTTTGACGTGATATCAACATTACCATTGGCTTTTTCCCACTCACGATGATTTCCCTCACATTCCTCACTTTTAAATTGTATGTTTGTCTTAGGAAACTCCGAAAGTCTGACATCGAATAACCTCCTGGAATATCGGTGTTGTTCAACGATAAAATGTTGTGGAACTTGAGTCCTATGATGCCTCCATTGAAGCAGTGAACAGCTCCATCTTCAGCTGGATTTATGACATTGTAACGAGATAAACTGGAGAGAATTCGGTTGTATTTTCGGACCCACCAAGGTTTGTGATCGGTAACAAGAAACCGAACCCGAGTTCGTAAGTGGTAAGAAGTGATGAACAAAGGAATGATGGTCTCGTCGAAGTCATGGAATAGGTTTCCGGTGAAGCCGCCGGTGGAGAAGATGAGGACAGGAACATTATGGATGAATTGACAAAGAGGTAAAAGGGTTTTGTTTGGTTGGAATATTATTTGAAGTGGAGTAACATCTCTTAAGGTAATTTTGTCTTCTTGTCTTGCATATGGATGAATTGAGATTGGAGAAATATTTGTTTGTTGAGTGTCATTATTGGTTGAGATGTAAAATTTAAGGTTGGTGTTGTTGATTCTTGTTGGGTTGTTTGTCAAACACACTTTGGAATGCAAATCTGTGTGACAAGAAAATCCTGTTTTTTGTAGTTGCTTACGATCCTCACCTACATGTAACCAATCAACAAATAATATTTAACTTCACTACGTTGT

Coding sequence (CDS)

ATGGAATCCTCCGTCGTAGCAGCTGAGCGCATTCTTTCCTATAATTTCAAGAACAAGAAGCTTCTAGAAGAAGCCTTCACCCACTCCTCCTACCTCGACTCTGCCTCCTATGAGCGCCTCGAGTTTATCGGCGATTCAGCTATTGGCCTCGCTATTACCAATTACTTCTTTCTTGCTTATCCGGACCTCCATCAGGGCCAACTATCTTTACTTAGGGCTGCTAACATTAGCACCGAGAAGCTTGCTCGTGTTGCAGTCCGCCATGGATTGTATAACTATGTTAGACGCAACGCCGCCGCTCTCGATGATAAGGTTAGAGAGTTTGTCGATTCCGTCGCCTTAGAAGACAACTCAGTAGTTCCGTATGGTGGGTTGGTGAAGGCTCCTAAAGTTCTTGCTGACATTGTGGAATCTGTAGCTGGTGCTGTATATGTAGATGTTAATTTTGATCTTCAAAAACTATGGGTGATTATTAGGGGTTTGTTAGAGCCTATCTATACTCTTGAAGACTTACAGGTAGAGCCCCAACCTGTAACTGTGCTCTTTGAAATTTGCCAAAAAAATGGGAAGCAGGTAGATATCAAGAATTGGAAAAACAGTACGAAGAACATCGCAAGTGTCTATGTCGATGGTAATTTTGTTGCTTCCGGTTCTTCAATGCAAAAGGAAATTGCAAGGCTTAATGCTGCCAGAGAAGCTCTCATCAAATTGTCGGATTCTATGGATACCAAAATTAGAACAGTTGTAACTATTGATGGTATCGATGAATCGTTTGAGATTGAAGGGGCAAAACATAAGCTACATGATTTTTGTTGCAAGAAAAAGTGGCCGAAACCAAACTACAGTACTGAGAAAGATTTAGGACCTTCACATGAAAGGAAATTTGTTTGCTCTGTTAAAATTTCCACTTCTTCTGGTACGCTCTATATGATGGGAGATGAGAAGTCAAGAGTAAAGGATGCAGAGAACTCTGCAGCCTCTTTGATGATTCGTGCTTTACAGGAAAGAAACTATCTCTAA

Protein sequence

MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAYPDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVVPYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTVLFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDSMDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVKISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL

Homology

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BLAST of Lsi05G005800 vs. ExPASy Swiss-Prot
Match: Q9LTQ0 (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 8.5e-105
Identity = 198/337 (58.75%), Postives = 255/337 (75.67%), Query Frame = 0


Query: 4   SVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAYPDL 63
           S+ A E+IL+Y F NK LL+EA TH+S  D  SYERLEFIGDSAIGLAI+NY +L YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVVPYG 123
               LSLLRAAN+STEKLARV++ HGLY+++RRNA +LD+KV+EF ++V  ED+  V YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTVLFE 183
           GLVKAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL+DLQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 ICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C K+ K++DIKNWK+   +IA +Y+D   +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 KIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVKIS- 303
           +    + ID      ++  AK KL++ C KKKWPKP YS E+D      ++FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           T   TLYM GDE+S++K AE+S+A  MIRAL++ +YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]

BLAST of Lsi05G005800 vs. ExPASy Swiss-Prot
Match: Q6ATG6 (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 264.2 bits (674), Expect = 2.0e-69
Identity = 147/276 (53.26%), Postives = 187/276 (67.75%), Query Frame = 0


Query: 9   ERILSYNFKNKKLLEEAFTHSSYLDSA-SYERLEFIGDSAIGLAITNYFFLAYPDLHQGQ 68
           ER+L Y F++ +LLEEA TH S+ D A SY+RLEF+GDSA+GLA +N+ +L  P L  G 
Sbjct: 41  ERLLRYQFRDGRLLEEALTHQSFADDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGPGP 100

Query: 69  LSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALE---DNSVVPYGG 128
           LS LRAANISTEKLARVAVRH LY  +RRN   LD  V +F+++V  E   D S VPYGG
Sbjct: 101 LSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPYGG 160

Query: 129 -LVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTVLFE 188
            +VKAPKVLADIVE++A AVYVD  FDL+KLW + R L EPI T E   ++ QPVT+L E
Sbjct: 161 SVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAE--TIDEQPVTMLHE 220

Query: 189 ICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDSMDT 248
           +CQK+GK    K W+     + +V+V G  V  GSS QK IA+LNAAR+A  KL+ +   
Sbjct: 221 LCQKHGKMAQFKTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDATRKLAGAKKQ 280

Query: 249 KIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKP 280
            + T V     DE  E+   K KL++ C ++ WPKP
Sbjct: 281 VLTTGVGNGLGDEIGELRECKQKLNEQCSRQNWPKP 314

[Close]

BLAST of Lsi05G005800 vs. ExPASy Swiss-Prot
Match: Q9FKF0 (Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.7e-57
Identity = 143/385 (37.14%), Postives = 212/385 (55.06%), Query Frame = 0


Query: 3   SSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAYPD 62
           +SV A E+IL+Y+F NK LL+EA T  S L    ++RLEF GDS + +A TNY    YP+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQKSPL----FDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVVPY 122
           L   +L  LR AN+S EK AR+AV H L++++     +L  KV+ F ++V  ED+  VPY
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDP-VPY 121

Query: 123 GGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQ-PVTVL 182
           GGLVKAPK+LAD +ES+A  V++DVN+D+++LW I R LLEPIYT +DL ++P+ P   L
Sbjct: 122 GGLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTL 181

Query: 183 FEICQKNGKQ-----------------------VDIKNWKNSTKNIASVYVDGNFVASGS 242
           F +  K+G +                       VD+++ K  +  I S  +      S +
Sbjct: 182 FRLADKHGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSEN 241

Query: 243 SMQKEIARLNA-------------AREALIKLSDSMDTKIRT--------------VVTI 302
           S+  E+++                 +  L ++  +   +I+T               + +
Sbjct: 242 SLTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQIQTGSSGNPLTYEMTTKQMVV 301

Query: 303 DGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVKISTSS--GTLY 335
           D      E    + +L + C K KWP+P +S +++ GP +E KFVCSVKI   +  GT +
Sbjct: 302 DKDSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFH 361

[Close]

BLAST of Lsi05G005800 vs. ExPASy Swiss-Prot
Match: Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 6.6e-49
Identity = 127/349 (36.39%), Postives = 195/349 (55.87%), Query Frame = 0


Query: 6    VAAERILSYNFKNKKLLEEAFTHSSYLDS--ASYERLEFIGDSAIGLAITNYFFLAYPDL 65
            V  ER L Y FK K LL EA TH+S   S  + Y+RLEF+GD+ +   IT + F  Y  L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   HQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDN--SVVP 125
              G+L+ LRAA ++ E  ARVAV+H L+ Y+R  ++AL+ ++REFV  V  E +      
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  YG-GLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 185
            +G G  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREAL--IKLS 245
            L E CQ+  + ++ K  ++       V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  DSMDTKIRTVVTIDGIDESFEIEGAKHK----------LHDFCCKKKWPKPNYSTEKDLG 305
            +  ++K + +   +  ++  E E    K          L+D C +K WP P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHERKFVCSVKISTS--SGTLYMMGDEKSRVKDAENSAASLMIRALQE 336
            P+H ++F   V+++TS    T   +G+    VK A++SAA L++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]

BLAST of Lsi05G005800 vs. ExPASy Swiss-Prot
Match: Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 4.3e-48
Identity = 122/330 (36.97%), Postives = 190/330 (57.58%), Query Frame = 0


Query: 11   ILSYNFKNKKLLEEAFTHSSYLDS--ASYERLEFIGDSAIGLAITNYFFLAYPDLHQGQL 70
            +L   F+NK LL EA TH+S   S  + Y+RLEF+GD+ +   IT + F  Y DL  G+L
Sbjct: 1544 VLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTDLPPGRL 1603

Query: 71   SLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALE--DNSVVPYG-GL 130
            + LRAA ++ E  ARVAV+H L+ ++R  ++AL+ ++REFV  V  E        +G G 
Sbjct: 1604 TDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGFNSFGLGD 1663

Query: 131  VKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTVLFEIC 190
             KAPKVL DIVES+AGA+++D  +D   +W + + LL P+ T E L +   PV  L E C
Sbjct: 1664 CKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPM--HPVRELQERC 1723

Query: 191  QKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDSMDTKI 250
            Q+  + ++ K  +        V+VDG  +    + QK++A+  AAR AL+ L +  +T  
Sbjct: 1724 QQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNALVVLKEK-ETAT 1783

Query: 251  RTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVKISTS- 310
            +     DG  ++      +  L+D C +++WP P Y    + GP+H ++FV SV+++TS 
Sbjct: 1784 KKEDERDGEKKNGAQMFTRQTLNDICLRRQWPMPQYRCVNEGGPAHAKRFVYSVRVNTSD 1843

Query: 311  -SGTLYMMGDEKSRVKDAENSAASLMIRAL 334
               T   +G+    VK A++SAA L++  L
Sbjct: 1844 RGWTDECIGEPMPSVKKAKDSAAVLLLELL 1870

[Close]

BLAST of Lsi05G005800 vs. ExPASy TrEMBL
Match: A0A6J1HKS4 (ribonuclease 3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465061 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 290/339 (85.55%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV+A E I+SYNFKNKKLLEEA THSSY++SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           PDL QGQLSLLRAANISTEKLARVAVRHGLY+YVRR A ALDDKVREFVDSVALE+NS V
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT EDL+VEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LFE+CQKNGKQVDIKNW N +K ++SV+VDG FVASGSS  KEIARLNAAREAL KLS +
Sbjct: 181 LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKT 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MD  IRT VTIDGIDESFEIEGAK KLHDFCCKKKWPKPNYSTEKD GPSH+++F CSVK
Sbjct: 241 MDINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           ISTSSG LYM+GDEKSRVKD+ENSAAS+MIRALQE+ YL
Sbjct: 301 ISTSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Lsi05G005800 vs. ExPASy TrEMBL
Match: A0A5D3DKE4 (Ribonuclease 3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold943G00580 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.5e-160
Identity = 294/339 (86.73%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           M SSV+A ERILSY FKNKKLLEEA TH SY DSASYERLEFIGDSAIGLA+TNYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           P+LHQGQLSLLRAAN+STEKLARVAV HGLYNYVRRNAA +D KV+EFVDSVALE +S V
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLE+LQVEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LF++CQ+NGKQVDIKNWKN +KNIASVYVDG FVASGSSMQKEIARLNAAREALIKLS S
Sbjct: 181 LFDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGS 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MDTKI+TVVTI+GIDESFEIEGAK KLHDFCC+KKW KP YS EK LGPSH R+FVCSVK
Sbjct: 241 MDTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           I T  GT Y++GDEKSRVKDAENSAASLMIRALQER +L
Sbjct: 301 IPTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Lsi05G005800 vs. ExPASy TrEMBL
Match: A0A1S3BM12 (ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.5e-160
Identity = 294/339 (86.73%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           M SSV+A ERILSY FKNKKLLEEA TH SY DSASYERLEFIGDSAIGLA+TNYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           P+LHQGQLSLLRAAN+STEKLARVAV HGLYNYVRRNAA +D KV+EFVDSVALE +S V
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLE+LQVEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LF++CQ+NGKQVDIKNWKN +KNIASVYVDG FVASGSSMQKEIARLNAAREALIKLS S
Sbjct: 181 LFDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGS 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MDTKI+TVVTI+GIDESFEIEGAK KLHDFCC+KKW KP YS EK LGPSH R+FVCSVK
Sbjct: 241 MDTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           I T  GT Y++GDEKSRVKDAENSAASLMIRALQER +L
Sbjct: 301 IPTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Lsi05G005800 vs. ExPASy TrEMBL
Match: A0A6J1F189 (ribonuclease 3-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111438633 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.6e-157
Identity = 284/339 (83.78%), Postives = 310/339 (91.45%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV+A E I+SYNFKNKKLLEEA THSSY++SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           PDL QGQLSLLRAANISTEKLARVAVRHGLY+YVRR A ALDDKVREFVDSVALE+NS +
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS-I 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT EDL+VEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LFE+CQKNGKQVDIKNW N +K ++SV+VDG FVASGSS  K IARLNAAREAL K+S +
Sbjct: 181 LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKVIARLNAAREALAKMSKT 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MD  IR  VTIDGIDESFEIEGAK KLHDFCCKKKWPKPNYSTEKD GPSH+++F CSVK
Sbjct: 241 MDINIRAAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           IS  SG LYM+GDEKSRVKD+ENSAAS+MIRALQE+ YL
Sbjct: 301 ISPPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Lsi05G005800 vs. ExPASy TrEMBL
Match: A0A0A0L1E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.4e-156
Identity = 285/339 (84.07%), Postives = 311/339 (91.74%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV+A ERILSYNF NK LLEEA TH SY  SASYERLEF+GDSAIGLA+TNYFFLA 
Sbjct: 1   MESSVIALERILSYNFNNKSLLEEALTHPSYSASASYERLEFVGDSAIGLAVTNYFFLAS 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           P LHQG LSLLRAAN+STEKLARVAV HGLYNYVRR++ A+DDKV+EFVDSVALE +S V
Sbjct: 61  PHLHQGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEFVDSVALEGSS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGG++KAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLE+LQVEPQPVTV
Sbjct: 121 PYGGMMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LF++CQ+NGKQVDIK+WKN + +IASV+VDG FVASGSSMQKEIARLNAAREALIKLSDS
Sbjct: 181 LFQVCQRNGKQVDIKHWKNGSNSIASVHVDGKFVASGSSMQKEIARLNAAREALIKLSDS 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MDT+I+T VTIDGIDESFEIEGAK KLHD C K+KW KPNYS EKDLGPSHER FVCSVK
Sbjct: 241 MDTRIKTFVTIDGIDESFEIEGAKQKLHDVCSKRKWQKPNYSVEKDLGPSHERIFVCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           I+T  GT Y++GDEKSRVKDAENSAASLMIRALQER +L
Sbjct: 301 IATCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Lsi05G005800 vs. NCBI nr
Match: XP_038903239.1 (ribonuclease 3-like protein 2 [Benincasa hispida])

HSP 1 Score: 590.5 bits (1521), Expect = 9.2e-165
Identity = 302/339 (89.09%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV AAERILSYNFKNKKLLEEA THSSY DSASYERLEFIGDSAIGLAI+NYFFLA+
Sbjct: 1   MESSVRAAERILSYNFKNKKLLEEALTHSSYPDSASYERLEFIGDSAIGLAISNYFFLAF 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           PDLHQGQLSLLRAANISTEKLARVAVR GLYNYVRRNAAALDDKVREFVDSVALE+NSV 
Sbjct: 61  PDLHQGQLSLLRAANISTEKLARVAVRLGLYNYVRRNAAALDDKVREFVDSVALENNSVA 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
            YGGLVKAPKVLADIVESVAGAVY+DVNFDLQ+LWVIIRGLLEPIYTLE LQVEPQPVT+
Sbjct: 121 -YGGLVKAPKVLADIVESVAGAVYIDVNFDLQRLWVIIRGLLEPIYTLESLQVEPQPVTL 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LFE+CQKNGKQVDIKNWKN   N+ SVYVDG+FVAS SSMQKEIA+L+AAREAL++LS+ 
Sbjct: 181 LFEVCQKNGKQVDIKNWKNGPNNVVSVYVDGSFVASSSSMQKEIAKLSAAREALVELSNH 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MDT  +TVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKP YSTEKDLGPSHE++FVCSV 
Sbjct: 241 MDTNTKTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPTYSTEKDLGPSHEKRFVCSVI 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           IST S TLYM+GDEKSRVKDAENSAASLMIRALQERNYL
Sbjct: 301 ISTPSDTLYMLGDEKSRVKDAENSAASLMIRALQERNYL 338

[Close]

BLAST of Lsi05G005800 vs. NCBI nr
Match: XP_022965096.1 (ribonuclease 3-like protein 2 [Cucurbita maxima])

HSP 1 Score: 575.9 bits (1483), Expect = 2.3e-160
Identity = 290/339 (85.55%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV+A E I+SYNFKNKKLLEEA THSSY++SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           PDL QGQLSLLRAANISTEKLARVAVRHGLY+YVRR A ALDDKVREFVDSVALE+NS V
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT EDL+VEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LFE+CQKNGKQVDIKNW N +K ++SV+VDG FVASGSS  KEIARLNAAREAL KLS +
Sbjct: 181 LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGTFVASGSSTHKEIARLNAAREALAKLSKT 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MD  IRT VTIDGIDESFEIEGAK KLHDFCCKKKWPKPNYSTEKD GPSH+++F CSVK
Sbjct: 241 MDINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           ISTSSG LYM+GDEKSRVKD+ENSAAS+MIRALQE+ YL
Sbjct: 301 ISTSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Lsi05G005800 vs. NCBI nr
Match: XP_008449146.1 (PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo] >KAA0055862.1 ribonuclease 3-like protein 2 [Cucumis melo var. makuwa] >TYK24086.1 ribonuclease 3-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 574.7 bits (1480), Expect = 5.2e-160
Identity = 294/339 (86.73%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           M SSV+A ERILSY FKNKKLLEEA TH SY DSASYERLEFIGDSAIGLA+TNYFFLAY
Sbjct: 1   MGSSVIAVERILSYKFKNKKLLEEALTHCSYPDSASYERLEFIGDSAIGLALTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           P+LHQGQLSLLRAAN+STEKLARVAV HGLYNYVRRNAA +D KV+EFVDSVALE +S V
Sbjct: 61  PNLHQGQLSLLRAANVSTEKLARVAVTHGLYNYVRRNAATMDAKVKEFVDSVALEGSS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLE+LQVEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEELQVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LF++CQ+NGKQVDIKNWKN +KNIASVYVDG FVASGSSMQKEIARLNAAREALIKLS S
Sbjct: 181 LFDVCQRNGKQVDIKNWKNGSKNIASVYVDGTFVASGSSMQKEIARLNAAREALIKLSGS 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MDTKI+TVVTI+GIDESFEIEGAK KLHDFCC+KKW KP YS EK LGPSH R+FVCSVK
Sbjct: 241 MDTKIKTVVTINGIDESFEIEGAKQKLHDFCCRKKWQKPKYSIEKKLGPSHGRRFVCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           I T  GT Y++GDEKSRVKDAENSAASLMIRALQER +L
Sbjct: 301 IPTCYGTFYIVGDEKSRVKDAENSAASLMIRALQERKHL 338

[Close]

BLAST of Lsi05G005800 vs. NCBI nr
Match: XP_023551903.1 (ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.7 bits (1480), Expect = 5.2e-160
Identity = 290/339 (85.55%), Postives = 314/339 (92.63%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV+A E I+SYNFKNKKLLEEA THSSY++SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           PDL QGQLSLLRAANISTEKLARVAVRHGLY+YVRR A ALDDKVREFVDSVALE+NS V
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT EDL+VEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LFE+CQKNGKQVDIKNW N +K ++SV+VDG FVASGSS  KEIARLNAAREAL KLS +
Sbjct: 181 LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKT 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MD  IRT VTIDGIDESFEIEGAK KLHDFCCKKKWPKPNYSTEKD GPSH+++F CSVK
Sbjct: 241 MDINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           ISTSSG LYM+GDEKSRVKD+ENSAAS+MIRALQE+ YL
Sbjct: 301 ISTSSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Lsi05G005800 vs. NCBI nr
Match: KAG6577457.1 (Ribonuclease 3-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015528.1 Ribonuclease 3-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 571.2 bits (1471), Expect = 5.8e-159
Identity = 288/339 (84.96%), Postives = 313/339 (92.33%), Query Frame = 0


Query: 1   MESSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAY 60
           MESSV+A E I+SYNFKNKKLLEEA THSSY++SASY+RLEFIGDSAIGLA TNYFFLAY
Sbjct: 1   MESSVLAVELIVSYNFKNKKLLEEALTHSSYVESASYQRLEFIGDSAIGLAFTNYFFLAY 60

Query: 61  PDLHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVV 120
           PDL QGQLSLLRAANISTEKLARVAVRHGLY+YVRR A ALDDKVREFVDSVALE+NS V
Sbjct: 61  PDLQQGQLSLLRAANISTEKLARVAVRHGLYHYVRRKAVALDDKVREFVDSVALENNS-V 120

Query: 121 PYGGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 180
           PYGGL+KAPKVLADIVESVAGA+YVDVNFDLQ+LWVIIRGLLEPIYT EDL+VEPQPVTV
Sbjct: 121 PYGGLMKAPKVLADIVESVAGAIYVDVNFDLQRLWVIIRGLLEPIYTPEDLEVEPQPVTV 180

Query: 181 LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDS 240
           LFE+CQKNGKQVDIKNW N +K ++SV+VDG FVASGSS  KEIARLNAAREAL KLS +
Sbjct: 181 LFEVCQKNGKQVDIKNWSNGSKTVSSVFVDGIFVASGSSTHKEIARLNAAREALAKLSKT 240

Query: 241 MDTKIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVK 300
           MD  IRT VTIDGIDESFEIEGAK KLHDFCCKKKWPKPNYSTEKD GPSH+++F CSVK
Sbjct: 241 MDINIRTAVTIDGIDESFEIEGAKQKLHDFCCKKKWPKPNYSTEKDFGPSHDKRFTCSVK 300

Query: 301 ISTSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           IS+ SG LYM+GDEKSRVKD+ENSAAS+MIRALQE+ YL
Sbjct: 301 ISSPSGMLYMVGDEKSRVKDSENSAASMMIRALQEKGYL 338

[Close]

BLAST of Lsi05G005800 vs. TAIR 10
Match: AT3G20420.1 (RNAse THREE-like protein 2 )

HSP 1 Score: 381.7 bits (979), Expect = 6.1e-106
Identity = 198/337 (58.75%), Postives = 255/337 (75.67%), Query Frame = 0


Query: 4   SVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAYPDL 63
           S+ A E+IL+Y F NK LL+EA TH+S  D  SYERLEFIGDSAIGLAI+NY +L YP L
Sbjct: 59  SMEAVEKILNYKFSNKSLLKEAITHTSCTDFPSYERLEFIGDSAIGLAISNYLYLTYPSL 118

Query: 64  HQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVVPYG 123
               LSLLRAAN+STEKLARV++ HGLY+++RRNA +LD+KV+EF ++V  ED+  V YG
Sbjct: 119 EPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDDLSVSYG 178

Query: 124 GLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTVLFE 183
           GLVKAPKVLAD+ ES+AGAVYVDVNFDLQ+LWVI RGLLEPI TL+DLQ +PQPV++LF+
Sbjct: 179 GLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQPVSMLFK 238

Query: 184 ICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREALIKLSDSMDT 243
           +C K+ K++DIKNWK+   +IA +Y+D   +ASG +  K+IARL AA+EAL KLS+    
Sbjct: 239 LCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEALRKLSEVFPV 298

Query: 244 KIRTVVTIDGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVKIS- 303
           +    + ID      ++  AK KL++ C KKKWPKP YS E+D      ++FVCS KI  
Sbjct: 299 E----MVIDEDSVEIQLTHAKTKLNEICLKKKWPKPIYSVEEDRSSVQGKRFVCSAKIKI 358

Query: 304 TSSGTLYMMGDEKSRVKDAENSAASLMIRALQERNYL 340
           T   TLYM GDE+S++K AE+S+A  MIRAL++ +YL
Sbjct: 359 TEEKTLYMKGDEQSKIKKAESSSAYHMIRALRKSHYL 391

[Close]

BLAST of Lsi05G005800 vs. TAIR 10
Match: AT5G45150.1 (RNAse THREE-like protein 3 )

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-58
Identity = 143/385 (37.14%), Postives = 212/385 (55.06%), Query Frame = 0


Query: 3   SSVVAAERILSYNFKNKKLLEEAFTHSSYLDSASYERLEFIGDSAIGLAITNYFFLAYPD 62
           +SV A E+IL+Y+F NK LL+EA T  S L    ++RLEF GDS + +A TNY    YP+
Sbjct: 2   NSVEAVEKILNYSFVNKTLLKEAITQKSPL----FDRLEFFGDSILEVAFTNYICHTYPN 61

Query: 63  LHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVVPY 122
           L   +L  LR AN+S EK AR+AV H L++++     +L  KV+ F ++V  ED+  VPY
Sbjct: 62  LKVKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAEAVRKEDDP-VPY 121

Query: 123 GGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQ-PVTVL 182
           GGLVKAPK+LAD +ES+A  V++DVN+D+++LW I R LLEPIYT +DL ++P+ P   L
Sbjct: 122 GGLVKAPKILADTLESIAATVFIDVNYDVKRLWEIFRSLLEPIYTPDDLLLQPKLPFLTL 181

Query: 183 FEICQKNGKQ-----------------------VDIKNWKNSTKNIASVYVDGNFVASGS 242
           F +  K+G +                       VD+++ K  +  I S  +      S +
Sbjct: 182 FRLADKHGSESTSGIRKMTTSTKILLRNKDCLDVDLEDVKGKSFEICSTELFSLSTVSEN 241

Query: 243 SMQKEIARLNA-------------AREALIKLSDSMDTKIRT--------------VVTI 302
           S+  E+++                 +  L ++  +   +I+T               + +
Sbjct: 242 SLTDEMSQEEVVIDEDSPNVEPEDVKGKLFEICYTRKLQIQTGSSGNPLTYEMTTKQMVV 301

Query: 303 DGIDESFEIEGAKHKLHDFCCKKKWPKPNYSTEKDLGPSHERKFVCSVKISTSS--GTLY 335
           D      E    + +L + C K KWP+P +S +++ GP +E KFVCSVKI   +  GT +
Sbjct: 302 DKDSLHVEPVNGRGELIEICTKNKWPRPIFSVQEEKGPKNEPKFVCSVKIEIPNIEGTFH 361

[Close]

BLAST of Lsi05G005800 vs. TAIR 10
Match: AT1G01040.1 (dicer-like 1 )

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-50
Identity = 127/349 (36.39%), Postives = 195/349 (55.87%), Query Frame = 0


Query: 6    VAAERILSYNFKNKKLLEEAFTHSSYLDS--ASYERLEFIGDSAIGLAITNYFFLAYPDL 65
            V  ER L Y FK K LL EA TH+S   S  + Y+RLEF+GD+ +   IT + F  Y  L
Sbjct: 1560 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1619

Query: 66   HQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDN--SVVP 125
              G+L+ LRAA ++ E  ARVAV+H L+ Y+R  ++AL+ ++REFV  V  E +      
Sbjct: 1620 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1679

Query: 126  YG-GLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 185
            +G G  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1680 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1739

Query: 186  LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREAL--IKLS 245
            L E CQ+  + ++ K  ++       V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1740 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1799

Query: 246  DSMDTKIRTVVTIDGIDESFEIEGAKHK----------LHDFCCKKKWPKPNYSTEKDLG 305
            +  ++K + +   +  ++  E E    K          L+D C +K WP P+Y   K+ G
Sbjct: 1800 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1859

Query: 306  PSHERKFVCSVKISTS--SGTLYMMGDEKSRVKDAENSAASLMIRALQE 336
            P+H ++F   V+++TS    T   +G+    VK A++SAA L++  L +
Sbjct: 1860 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1906

[Close]

BLAST of Lsi05G005800 vs. TAIR 10
Match: AT1G01040.2 (dicer-like 1 )

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-50
Identity = 127/349 (36.39%), Postives = 195/349 (55.87%), Query Frame = 0


Query: 6    VAAERILSYNFKNKKLLEEAFTHSSYLDS--ASYERLEFIGDSAIGLAITNYFFLAYPDL 65
            V  ER L Y FK K LL EA TH+S   S  + Y+RLEF+GD+ +   IT + F  Y  L
Sbjct: 1561 VGLERALKYEFKEKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTSL 1620

Query: 66   HQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDN--SVVP 125
              G+L+ LRAA ++ E  ARVAV+H L+ Y+R  ++AL+ ++REFV  V  E +      
Sbjct: 1621 PPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFVKEVQTESSKPGFNS 1680

Query: 126  YG-GLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTV 185
            +G G  KAPKVL DIVES+AGA+++D   D    W + + LL+P+ T E L +   PV  
Sbjct: 1681 FGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTAAWKVFQPLLQPMVTPETLPM--HPVRE 1740

Query: 186  LFEICQKNGKQVDIKNWKNSTKNIASVYVDGNFVASGSSMQKEIARLNAAREAL--IKLS 245
            L E CQ+  + ++ K  ++       V++DG  V    + QK++A+  AAR AL  +K  
Sbjct: 1741 LQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVGVAQNPQKKMAQKLAARNALAALKEK 1800

Query: 246  DSMDTKIRTVVTIDGIDESFEIEGAKHK----------LHDFCCKKKWPKPNYSTEKDLG 305
            +  ++K + +   +  ++  E E    K          L+D C +K WP P+Y   K+ G
Sbjct: 1801 EIAESKEKHINNGNAGEDQGENENGNKKNGHQPFTRQTLNDICLRKNWPMPSYRCVKEGG 1860

Query: 306  PSHERKFVCSVKISTS--SGTLYMMGDEKSRVKDAENSAASLMIRALQE 336
            P+H ++F   V+++TS    T   +G+    VK A++SAA L++  L +
Sbjct: 1861 PAHAKRFTFGVRVNTSDRGWTDECIGEPMPSVKKAKDSAAVLLLELLNK 1907

[Close]

BLAST of Lsi05G005800 vs. TAIR 10
Match: AT4G15417.1 (RNAse II-like 1 )

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-38
Identity = 96/234 (41.03%), Postives = 146/234 (62.39%), Query Frame = 0


Query: 5   VVAAERILSYNFKNKKLLEEAFTHSSYLD--SASYERLEFIGDSAIGLAITNYFFLAYPD 64
           + + E+IL+Y FK+K LL +AFT +SY+D  S SYE LE +GDS + + I   F   YP 
Sbjct: 29  IESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELLGDSILNMGIIYDFIKLYPK 88

Query: 65  LHQGQLSLLRAANISTEKLARVAVRHGLYNYVRRNAAALDDKVREFVDSVALEDNSVVPY 124
              G L+ LRA N+ TEKLARVAV H LY+Y+R     L++++ EFV+++   +   +  
Sbjct: 89  EAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEEQILEFVEAM---EKYPLHS 148

Query: 125 GGLVKAPKVLADIVESVAGAVYVDVNFDLQKLWVIIRGLLEPIYTLEDLQVEPQPVTVLF 184
            GL+K PKVLADIVES  GA+++D N   + +W +I+ LLEPI  L+  +++  P+T L 
Sbjct: 149 NGLLKVPKVLADIVESTIGAIFMDCN-STETVWKVIKPLLEPIIHLD--KMKSHPMTELN 208

Query: 185 EICQKNGKQVDIKN-WKNSTKNIASVYVDGNFVASG-SSMQKEIARLNAAREAL 235
           E+CQK   ++  K+ W+ +       +++  FV  G   ++KE AR  AA+ A+
Sbjct: 209 EMCQKRNLKLTSKDTWEEN--QTYCFHIEDKFVGCGHHPVKKETARNFAAKNAI 254

The following BLAST results are available for this feature:

BLAST of Lsi05G005800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTQ0	8.5e-105	58.75	Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1	[more]
Q6ATG6	2.0e-69	53.26	Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0...	[more]
Q9FKF0	1.7e-57	37.14	Ribonuclease 3-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=RTL3 PE=2 SV=1	[more]
Q9SP32	6.6e-49	36.39	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV...	[more]
Q8LMR2	4.3e-48	36.97	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL...	[more]

BLAST of Lsi05G005800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKS4	1.1e-160	85.55	ribonuclease 3-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111465061 PE=4 S...	[more]
A0A5D3DKE4	2.5e-160	86.73	Ribonuclease 3-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3BM12	2.5e-160	86.73	ribonuclease 3-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103491097 PE=4 SV=1	[more]
A0A6J1F189	2.6e-157	83.78	ribonuclease 3-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111438633 PE=4...	[more]
A0A0A0L1E2	8.4e-156	84.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192230 PE=4 SV=1	[more]

BLAST of Lsi05G005800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903239.1	9.2e-165	89.09	ribonuclease 3-like protein 2 [Benincasa hispida]	[more]
XP_022965096.1	2.3e-160	85.55	ribonuclease 3-like protein 2 [Cucurbita maxima]	[more]
XP_008449146.1	5.2e-160	86.73	PREDICTED: ribonuclease 3-like protein 2 [Cucumis melo] >KAA0055862.1 ribonuclea...	[more]
XP_023551903.1	5.2e-160	85.55	ribonuclease 3-like protein 2 [Cucurbita pepo subsp. pepo]	[more]
KAG6577457.1	5.8e-159	84.96	Ribonuclease 3-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]

BLAST of Lsi05G005800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20420.1	6.1e-106	58.75	RNAse THREE-like protein 2	[more]
AT5G45150.1	1.2e-58	37.14	RNAse THREE-like protein 3	[more]
AT1G01040.1	4.7e-50	36.39	dicer-like 1	[more]
AT1G01040.2	4.7e-50	36.39	dicer-like 1	[more]
AT4G15417.1	5.4e-38	41.03	RNAse II-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014720	Double-stranded RNA-binding domain	SMART	SM00358	DRBM_3	coord: 263..334 e-value: 7.3E-9 score: 45.4 coord: 177..238 e-value: 0.037 score: 18.8
IPR014720	Double-stranded RNA-binding domain	PFAM	PF00035	dsrm	coord: 263..333 e-value: 3.8E-15 score: 56.3 coord: 177..237 e-value: 1.1E-5 score: 26.0
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 262..335 score: 11.843998
IPR014720	Double-stranded RNA-binding domain	PROSITE	PS50137	DS_RBD	coord: 176..239 score: 10.363144
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 20..171 e-value: 4.5E-34 score: 129.2
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 38..146 e-value: 6.5E-23 score: 81.3
IPR000999	Ribonuclease III domain	PROSITE	PS50142	RNASE_3_2	coord: 5..148 score: 35.87672
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 20..171 e-value: 5.21817E-40 score: 135.433
None	No IPR available	GENE3D	3.30.160.20		coord: 172..243 e-value: 5.3E-8 score: 34.8
None	No IPR available	GENE3D	3.30.160.20		coord: 260..336 e-value: 4.2E-18 score: 67.4
None	No IPR available	PANTHER	PTHR14950:SF49	RIBONUCLEASE 3-LIKE PROTEIN 2-RELATED	coord: 7..330
None	No IPR available	PANTHER	PTHR14950	DICER-RELATED	coord: 7..330
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 130..237
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 262..337
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 1..171 e-value: 5.4E-48 score: 165.2
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 4..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G005800.1	Lsi05G005800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030422	production of siRNA involved in RNA interference
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding