Lsi05G005210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G005210
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	A2L_zn_ribbon domain-containing protein
Location	chr05: 6525408 .. 6527612 (+)
RNA-Seq Expression	Lsi05G005210
Synteny	Lsi05G005210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAACCCCATACTACAGGCAACCACAAGTGAAATTGGTGGTTGGCGCGAATTAGACCGAAAACGTGACGTGTCCAAACGTAGACCGGCCTAAGCCGATCCACCCGAACCACTTCCTCCGCTATTTCCCTCTTGCTCTCTCCCTTCTGCAACCCAATCATGGAAGCTTTACCCGTACCCCCAATTTCTAATCCTCTTTTCCCATTCACTCTTCGTCGTTCCAGTACTTTTCCCCTCAAACCGCGCTCAATTTCGATCCAAAATCGAAGACGAACAGCCGCGTTTGCTGCCATTGACGGCGCTTCGCTTGCACCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGGTAATGCGAATGATTTTCGATCATTTGTGCAGTTTCTTTTGATTCTATATCACTCTTATCTGATCGGTTCTGATGTTGGTTTTAGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGAGTTTTTGGGACTTTTTCAACTGATTTGTTGTTTTGTTCTGTTTGTGTTTTCTTAGCATGATTTGAATTCAAAATTGTAGATTGCGCAAAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTACAAATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGGAGTATTTCTGTTCGTAATTTAGGGATAGTTTTTTTTAGAGTGTTTCTATAACCATTGCAAGATGTGAGAAATACATCCTTAACTAAGGTTAGAGGTTTGTTTTGAATTTGAATCATCATCATGAACTGAAAAAGAAGTGTTGTCAATGAATATTTGTGGAAAAAAATCATATTAAATATTTAAATGAACAAATAAGCTTATTATTAATCAATTTTAACTTTTTCATTCAGGTAAAGCATTAAATTTAAAATTGTCAACCATTAGTGTGATTAAATTAAATTGAAACACTTATAAAAAATTGATAAATGTTTAGCTATAATGTTTTAACTCTTTATTCCAAATAAGAAACATTTATAAGTAATATGGTATTTTGTAACTTTTGCTATAAACAAAGTCGAAAAACAAACTAAAAAGAGTACAGCTTAAGACTAACATAAGCTATAAACAATGTTGAAAAAGAAACTAAAAATCTTTAATGGGTTTGGTTTAGTTTTCAAGTGACCATTATATAGCAAAACAGCAGTAGCAAGACCACCGATTAGCACCCCACTGCCGTCCATAGAGGTGTGAAAATAATGCTTTAATTCCCAGCCGTCTGATTTCAGGACCTTTCAACCACTGCCTACGGACAACCTTCTCTTCCATTCCGATTTTAGCCTAAGAACTAGAGAGTGCCGAGGGAGAAAGGGGCTGGATGTGTGATTGAAGGAAAGGGAAGGGAACGACCATGAAAGGGAGAGATTAAAGAAAGAAATTGAGTAAAATAGATTCAATTTTCATATTTACAGAGATTGAGGGTTTGATTTTGACATTTATTAAAGTTTGAAGGTTGGGTCTAATTTTTCAATGGAAAGTTTAGGGGTTCAATTGTTATCTACCACCATATTTCATAGATGGTTTTTGCAATTTGCCCCAAAAAAACATGAGTTCTTCCTTGTTTTCGACACTTATCGGTTGGACAGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAGCATGATATGTCTCTTTTGAAAGCTGTATAATTCCACATATTTCAAAGAAAATGGTTCAGGATCTTCTTTGTTGATTTCCAGGCAAGACGAGCAACAAAGGAAGCAATCTATTCGTTGAGTGTATGTACTTGAGGTATATAACTATTTACAAGTTCACCAAGTTTTTATTAATTACATGCTCAATCAAATGGTTAAATGTTGCTAGATGATTGTTTCCTGGTTAGATATCCCTATCGTGCATAGTTTTTGTAATGTCATTTTCTCCCTCAACATAATTTATAACATGTATAAAAAGATTAAACATTCTTTAATCTATCAACTTAAGCTTCTAAGTTTGATAGTGATTTAATTATACAATAAAGCTAGGCCTTTCTTTCCTCCTTGCGTGACGAGCATGTTAAATCAGAAGATTAATTTTGATTGAGTGGGATATTGTGTAACAAAATTTGTAGTCTCTGGCTGATTTCTATTAGCATCATGTTTTGATGGCAAGAA

mRNA sequence

ATTAACCCCATACTACAGGCAACCACAAGTGAAATTGGTGGTTGGCGCGAATTAGACCGAAAACGTGACGTGTCCAAACGTAGACCGGCCTAAGCCGATCCACCCGAACCACTTCCTCCGCTATTTCCCTCTTGCTCTCTCCCTTCTGCAACCCAATCATGGAAGCTTTACCCGTACCCCCAATTTCTAATCCTCTTTTCCCATTCACTCTTCGTCGTTCCAGTACTTTTCCCCTCAAACCGCGCTCAATTTCGATCCAAAATCGAAGACGAACAGCCGCGTTTGCTGCCATTGACGGCGCTTCGCTTGCACCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTATTGCGCAAAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTACAAATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGGAGTATTTCTGTTCGTAATTTAGGGATAGTTTTTTTTAGAGTGTTTCTATAACCATTGCAAGATGTGAGAAATACATCCTTAACTAAGGTTAGAGGTTTGTTTTGAATTTGAATCATCATCATGAACTGAAAAAGAAGTGTTGTCAATGAATATTTGTGGAAAAAAATCATATTAAATATTTAAATGAACAAATAAGCTTATTATTAATCAATTTTAACTTTTTCATTCAGGTAAAGCATTAAATTTAAAATTGTCAACCATTAGTGTGATTAAATTAAATTGAAACACTTATAAAAAATTGATAAATGTTTAGCTATAATGTTTTAACTCTTTATTCCAAATAAGAAACATTTATAAGTAATATGGTATTTTGTAACTTTTGCTATAAACAAAGTCGAAAAACAAACTAAAAAGAGTACAGCTTAAGACTAACATAAGCTATAAACAATGTTGAAAAAGAAACTAAAAATCTTTAATGGGTTTGGTTTAGTTTTCAAGTGACCATTATATAGCAAAACAGCAGTAGCAAGACCACCGATTAGCACCCCACTGCCGTCCATAGAGGTGTGAAAATAATGCTTTAATTCCCAGCCGTCTGATTTCAGGACCTTTCAACCACTGCCTACGGACAACCTTCTCTTCCATTCCGATTTTAGCCTAAGAACTAGAGAGTGCCGAGGGAGAAAGGGGCTGGATGTGTGATTGAAGGAAAGGGAAGGGAACGACCATGAAAGGGAGAGATTAAAGAAAGAAATTGAGTAAAATAGATTCAATTTTCATATTTACAGAGATTGAGGGTTTGATTTTGACATTTATTAAAGTTTGAAGGTTGGGTCTAATTTTTCAATGGAAAGTTTAGGGGTTCAATTGTTATCTACCACCATATTTCATAGATGGTTTTTGCAATTTGCCCCAAAAAAACATGAGTTCTTCCTTGTTTTCGACACTTATCGGTTGGACAGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAGCATGATATGTCTCTTTTGAAAGCTGTATAATTCCACATATTTCAAAGAAAATGGTTCAGGATCTTCTTTGTTGATTTCCAGGCAAGACGAGCAACAAAGGAAGCAATCTATTCGTTGAGTGTATGTACTTGAGGTATATAACTATTTACAAGTTCACCAAGTTTTTATTAATTACATGCTCAATCAAATGGTTAAATGTTGCTAGATGATTGTTTCCTGGTTAGATATCCCTATCGTGCATAGTTTTTGTAATGTCATTTTCTCCCTCAACATAATTTATAACATGTATAAAAAGATTAAACATTCTTTAATCTATCAACTTAAGCTTCTAAGTTTGATAGTGATTTAATTATACAATAAAGCTAGGCCTTTCTTTCCTCCTTGCGTGACGAGCATGTTAAATCAGAAGATTAATTTTGATTGAGTGGGATATTGTGTAACAAAATTTGTAGTCTCTGGCTGATTTCTATTAGCATCATGTTTTGATGGCAAGAA

Coding sequence (CDS)

ATGGAAGCTTTACCCGTACCCCCAATTTCTAATCCTCTTTTCCCATTCACTCTTCGTCGTTCCAGTACTTTTCCCCTCAAACCGCGCTCAATTTCGATCCAAAATCGAAGACGAACAGCCGCGTTTGCTGCCATTGACGGCGCTTCGCTTGCACCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTATTGCGCAAAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTACAAATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGGAGTATTTCTGTTCGTAATTTAG

Protein sequence

MEALPVPPISNPLFPFTLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASLAPDPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECGNSFFLHTGVFLFVI

Homology

[Close]

BLAST of Lsi05G005210 vs. ExPASy TrEMBL
Match: A0A0A0L7H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061530 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 5.4e-39
Identity = 91/115 (79.13%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF-TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASLAP-DPSQVE 60
           MEAL    +SNPL    TL  S+TFPLKPRS SI NRRRT AFAAIDGASL P D +QV+
Sbjct: 1   MEAL----VSNPLITHPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPADSTQVQ 60

Query: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECG 114
           ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVL +DDYFRCPECG
Sbjct: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECG 111

[Close]

BLAST of Lsi05G005210 vs. ExPASy TrEMBL
Match: A0A1S3BLU9 (uncharacterized protein LOC103491051 OS=Cucumis melo OX=3656 GN=LOC103491051 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.9e-36
Identity = 90/115 (78.26%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF-TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGA-SLAPDPSQVE 60
           MEAL    ISNPL    TLRRS     KPRS S+ NRRRT AFAAIDGA SLA D +QVE
Sbjct: 1   MEAL----ISNPLITHPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVE 60

Query: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECG 114
           ITWQIFVGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL +DDYFRCP+CG
Sbjct: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCG 106

[Close]

BLAST of Lsi05G005210 vs. ExPASy TrEMBL
Match: A0A6J1FBA7 (uncharacterized protein LOC111442262 OS=Cucurbita moschata OX=3662 GN=LOC111442262 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.9e-34
Identity = 86/121 (71.07%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 1   MEALPVPPISNPL-FPFTLRRS----STFPLKPRSISIQNRRRTAAFAAIDGASL---AP 60
           MEAL +P  ++P  FP T   S    S FPL  RS S+  RRRT  FAAIDGASL   A 
Sbjct: 1   MEAL-LPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAAA 60

Query: 61  DPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPEC 114
           DP+QVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL + DYFRCPEC
Sbjct: 61  DPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPEC 120

[Close]

BLAST of Lsi05G005210 vs. ExPASy TrEMBL
Match: A0A6J1L2M2 (uncharacterized protein LOC111498537 OS=Cucurbita maxima OX=3661 GN=LOC111498537 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-33
Identity = 86/122 (70.49%), Postives = 91/122 (74.59%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF------TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASL---A 60
           MEAL   PIS   F F      + R  S FPL  RS S+  RRRT  FAAIDGASL   A
Sbjct: 1   MEAL--LPISTSPFRFLPTANASPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAA 60

Query: 61  PDPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPE 114
            DP+QVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL + DYFRCPE
Sbjct: 61  ADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPE 120

[Close]

BLAST of Lsi05G005210 vs. ExPASy TrEMBL
Match: A0A6J1DN65 (uncharacterized protein LOC111022135 OS=Momordica charantia OX=3673 GN=LOC111022135 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27
Identity = 74/115 (64.35%), Postives = 84/115 (73.04%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPFTLRRSSTFPLKPRSISIQNRRRTAAFAAIDGAS--LAPDPSQVE 60
           MEAL   PISN LF FT         KP + SI NRR     AAI+ A+     DPSQ++
Sbjct: 1   MEAL--APISNSLFRFT---------KPLN-SIPNRRPKTTIAAINDAASQQQADPSQLQ 60

Query: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECG 114
           ITWQI VGAIAGVTPFVVAGIEF+KRI+AQ+RC+ECGGSGLVL  DDYFRCP+CG
Sbjct: 61  ITWQIAVGAIAGVTPFVVAGIEFTKRIVAQQRCEECGGSGLVLMEDDYFRCPQCG 103

[Close]

BLAST of Lsi05G005210 vs. NCBI nr
Match: XP_038903334.1 (uncharacterized protein LOC120089955 [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 7.7e-48
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPFTLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASLAPDPSQVEIT 60
           MEALP+PPISNPLFPF  RRSSTFPLKPRS SIQNRRRTA +AAIDGASL  D  QVEIT
Sbjct: 1   MEALPLPPISNPLFPF--RRSSTFPLKPRSNSIQNRRRTATYAAIDGASLTADSIQVEIT 60

Query: 61  WQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECG 114
           WQIFVGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL +DDYFRCPECG
Sbjct: 61  WQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPECG 111

[Close]

BLAST of Lsi05G005210 vs. NCBI nr
Match: XP_004149576.1 (uncharacterized protein LOC101220311 [Cucumis sativus] >KGN56051.1 hypothetical protein Csa_011367 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 1.1e-38
Identity = 91/115 (79.13%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF-TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASLAP-DPSQVE 60
           MEAL    +SNPL    TL  S+TFPLKPRS SI NRRRT AFAAIDGASL P D +QV+
Sbjct: 1   MEAL----VSNPLITHPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPADSTQVQ 60

Query: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECG 114
           ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVL +DDYFRCPECG
Sbjct: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECG 111

[Close]

BLAST of Lsi05G005210 vs. NCBI nr
Match: XP_008449071.1 (PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 4.0e-36
Identity = 90/115 (78.26%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF-TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGA-SLAPDPSQVE 60
           MEAL    ISNPL    TLRRS     KPRS S+ NRRRT AFAAIDGA SLA D +QVE
Sbjct: 1   MEAL----ISNPLITHPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAADSTQVE 60

Query: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCPECG 114
           ITWQIFVGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL +DDYFRCP+CG
Sbjct: 61  ITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCG 106

[Close]

BLAST of Lsi05G005210 vs. NCBI nr
Match: KAG7028282.1 (hypothetical protein SDJN02_09463, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.8 bits (390), Expect = 4.8e-34
Identity = 87/123 (70.73%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF------TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASL---- 60
           MEAL   PIS   F F      +LR  S+FPL  RS S+  RRRT  FAAIDGASL    
Sbjct: 1   MEAL--LPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAA 60

Query: 61  APDPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCP 114
           A DP+QVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL + DYFRCP
Sbjct: 61  AADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCP 120

[Close]

BLAST of Lsi05G005210 vs. NCBI nr
Match: KAG6596745.1 (hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.8 bits (390), Expect = 4.8e-34
Identity = 87/123 (70.73%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 1   MEALPVPPISNPLFPF------TLRRSSTFPLKPRSISIQNRRRTAAFAAIDGASL---- 60
           MEAL   PIS   F F      +LR  S+FPL  RS S+  RRRT  FAAIDGASL    
Sbjct: 1   MEAL--LPISTSPFRFPPTANASLRPVSSFPLNLRSNSLNKRRRTHTFAAIDGASLAAAA 60

Query: 61  APDPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKRCKECGGSGLVLTNDDYFRCP 114
           A DP+QVEITWQI VGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVL + DYFRCP
Sbjct: 61  AADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCP 120

[Close]

BLAST of Lsi05G005210 vs. TAIR 10
Match: AT5G55570.1 (unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 31  ISIQNRRRTAAFAAIDGASLAPDPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIIAQKR 90
           +++ NRR     A  + A    +  + EITWQI VG IAG+ PFVVAG+EFSKRIIAQKR
Sbjct: 47  MTMSNRRLKTTSALSELADTVAETGKSEITWQIIVGTIAGIIPFVVAGVEFSKRIIAQKR 106

Query: 91  CKECGGSGLVLTNDDYFRCPECG 114
           C+ECGG+GLV  +  YFRCPECG
Sbjct: 107 CEECGGTGLVSRDKKYFRCPECG 129

The following BLAST results are available for this feature:

BLAST of Lsi05G005210 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G005210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7H1	5.4e-39	79.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061530 PE=4 SV=1	[more]
A0A1S3BLU9	1.9e-36	78.26	uncharacterized protein LOC103491051 OS=Cucumis melo OX=3656 GN=LOC103491051 PE=...	[more]
A0A6J1FBA7	8.9e-34	71.07	uncharacterized protein LOC111442262 OS=Cucurbita moschata OX=3662 GN=LOC1114422...	[more]
A0A6J1L2M2	1.5e-33	70.49	uncharacterized protein LOC111498537 OS=Cucurbita maxima OX=3661 GN=LOC111498537...	[more]
A0A6J1DN65	2.1e-27	64.35	uncharacterized protein LOC111022135 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Lsi05G005210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903334.1	7.7e-48	88.50	uncharacterized protein LOC120089955 [Benincasa hispida]	[more]
XP_004149576.1	1.1e-38	79.13	uncharacterized protein LOC101220311 [Cucumis sativus] >KGN56051.1 hypothetical ...	[more]
XP_008449071.1	4.0e-36	78.26	PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]	[more]
KAG7028282.1	4.8e-34	70.73	hypothetical protein SDJN02_09463, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6596745.1	4.8e-34	70.73	hypothetical protein SDJN03_09925, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi05G005210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55570.1	1.4e-23	59.04	unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014900	Viral late gene transcription factor 3 , zinc ribbon	PFAM	PF08792	A2L_zn_ribbon	coord: 88..116 e-value: 2.8E-7 score: 30.1
None	No IPR available	PANTHER	PTHR36809	TRANSMEMBRANE PROTEIN	coord: 30..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G005210.1	Lsi05G005210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane