Lcy03g000680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g000680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor bHLH149-like
Location	Chr03: 1861435 .. 1862789 (-)
RNA-Seq Expression	Lcy03g000680
Synteny	Lcy03g000680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCTTCCTCTCTTCTCTCACAAACCCCTCTCTCTCTCTCTCTCGCTTCCTCCATTGACGCCCATTCTCAAGCTCCAATCTAACCTCATTTTCATCTCTCTCACTCCATTCTCTCTCCCAAAGGTATTACATATTCTTACAATTCCTTTCATCTCTTTTCATTTATCATAGTTCTGATCCACTTTTCTTGATTTCCGATGTTCATTTCATGTGCGCATTCATATCCGACTGCGCGGTCGAGAGGGAGAATTTCTCTTTCTTTTTTGTGGAAATTCAATTTCGTTTCGAATTAGCATTAGGAAATTGAAAATTCCTGTGTTCTATATTTGTGAAATTTTGCCTGCCTTGAGGATTTATTTGTTTCTGTGATTCTGTTCGCCGAGTTCTACTCTCGTCTAATGCTTTTTTGTTGATTTGATTTGCAGATTGTTTAATCTTGACGCGGTGTGTGTGCTTGTGCTCCTGTATTATTGCTGGATTGGTTTCTCAAGATGGATGCGATTGTTTCTAACCTAGAAGAGCCGAGGAATTCCGATTCGACTGCGCAGCGACCGAGTAAACGCCGAAAAATCGAATCCGAGAATCAAGCGGCGGAGACTCGCGGCGCCGAATCGACGGATTTCGGAAGACGGTGGAGAACAGAGTCGGAGCAACAGATTTACTCTTCGAAACTAGTCGAGGCTCTCCATCGAGTAAACCAGAAATCGGTATCGCCGCCGGCGAGATCTTCGATCGACGGCCGGAAAGTCCGCGAGACGGCGGACCGAGTCCTCGCCGTCGCTGCGAAAGGCAAGACGCGGTGGAGCAGAGCGATGTTGACAAATCGACTCGATCTCAAACTCAAGAAGCTGAAGAAGGCGAAACCGGCAGGAAACTGTAGCCGGCCGAAGAAATTGAAAATTAGGTCCGAGACGAAGAAATTGCCGGCAGTGCAGAGGAAAGTTCGAACTCTCGGGCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTGCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACTGCCGTCGCCGAGCTTCTCGCCGGCGCTCCGGCTGATCGTCAAAGCTTCAGAACGAATTCGTAGAAGCCAGTTCCAACATTTGTAATGCCAGGTGTTTTTTTTTTTTTTTTTCTTTTCCTTTCACGAATATTATTCGTGTATTGTTATGAAATATTTTATTGTACACATTTTAATCTTCAATTTTTTTTTTTTTTTTAATTTCTTGATTGAAAAGTGGTACCTAATTTTGATTCTCTTATTAATATAATAAGAGAAGAAAGACGAGCCCCATGAAATTAGGGATTTAGGGTTTAGTAAT

mRNA sequence

CTCTTCTTCCTCTCTTCTCTCACAAACCCCTCTCTCTCTCTCTCTCGCTTCCTCCATTGACGCCCATTCTCAAGCTCCAATCTAACCTCATTTTCATCTCTCTCACTCCATTCTCTCTCCCAAAGATTGTTTAATCTTGACGCGGTGTGTGTGCTTGTGCTCCTGTATTATTGCTGGATTGGTTTCTCAAGATGGATGCGATTGTTTCTAACCTAGAAGAGCCGAGGAATTCCGATTCGACTGCGCAGCGACCGAGTAAACGCCGAAAAATCGAATCCGAGAATCAAGCGGCGGAGACTCGCGGCGCCGAATCGACGGATTTCGGAAGACGGTGGAGAACAGAGTCGGAGCAACAGATTTACTCTTCGAAACTAGTCGAGGCTCTCCATCGAGTAAACCAGAAATCGGTATCGCCGCCGGCGAGATCTTCGATCGACGGCCGGAAAGTCCGCGAGACGGCGGACCGAGTCCTCGCCGTCGCTGCGAAAGGCAAGACGCGGTGGAGCAGAGCGATGTTGACAAATCGACTCGATCTCAAACTCAAGAAGCTGAAGAAGGCGAAACCGGCAGGAAACTGTAGCCGGCCGAAGAAATTGAAAATTAGGTCCGAGACGAAGAAATTGCCGGCAGTGCAGAGGAAAGTTCGAACTCTCGGGCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTGCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACTGCCGTCGCCGAGCTTCTCGCCGGCGCTCCGGCTGATCGTCAAAGCTTCAGAACGAATTCGTAGAAGCCAGTTCCAACATTTGTAATGCCAGGTGTTTTTTTTTTTTTTTTTCTTTTCCTTTCACGAATATTATTCGTGTATTGTTATGAAATATTTTATTGTACACATTTTAATCTTCAATTTTTTTTTTTTTTTTAATTTCTTGATTGAAAAGTGGTACCTAATTTTGATTCTCTTATTAATATAATAAGAGAAGAAAGACGAGCCCCATGAAATTAGGGATTTAGGGTTTAGTAAT

Coding sequence (CDS)

ATGGATGCGATTGTTTCTAACCTAGAAGAGCCGAGGAATTCCGATTCGACTGCGCAGCGACCGAGTAAACGCCGAAAAATCGAATCCGAGAATCAAGCGGCGGAGACTCGCGGCGCCGAATCGACGGATTTCGGAAGACGGTGGAGAACAGAGTCGGAGCAACAGATTTACTCTTCGAAACTAGTCGAGGCTCTCCATCGAGTAAACCAGAAATCGGTATCGCCGCCGGCGAGATCTTCGATCGACGGCCGGAAAGTCCGCGAGACGGCGGACCGAGTCCTCGCCGTCGCTGCGAAAGGCAAGACGCGGTGGAGCAGAGCGATGTTGACAAATCGACTCGATCTCAAACTCAAGAAGCTGAAGAAGGCGAAACCGGCAGGAAACTGTAGCCGGCCGAAGAAATTGAAAATTAGGTCCGAGACGAAGAAATTGCCGGCAGTGCAGAGGAAAGTTCGAACTCTCGGGCGCCTGGTTCCCGGCTGCCGGAAAATCTCATTCCCGAACCTGCTTGAAGAAGCTACAGATTACATCGCCGCTCTACAGATGCAGGTCCGCGCCATGACTGCCGTCGCCGAGCTTCTCGCCGGCGCTCCGGCTGATCGTCAAAGCTTCAGAACGAATTCGTAG

Protein sequence

MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKLKKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAALQMQVRAMTAVAELLAGAPADRQSFRTNS

Homology

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BLAST of Lcy03g000680 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.2e-36
Identity = 101/201 (50.25%), Postives = 130/201 (64.68%), Query Frame = 0


Query: 4   IVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVE 63
           +V +L     +   + R  K R  E+     E R        +RW+T   QQIY+ KLVE
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESL-KRWKTNRVQQIYACKLVE 60

Query: 64  ALHRVNQKSVSPPARSSID------GRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKL 123
           AL RV Q+S S  + +  D       R++R+TADRVLA +A+G TRWSRA+L +R+  KL
Sbjct: 61  ALRRVRQRS-STTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKL 120

Query: 124 KKLKKAKPA-GNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDY 183
           KK +KAK + GNC   K L   +   KLPAV+RK++ LGRLVPGCRK+S PNLL+EATDY
Sbjct: 121 KKHRKAKKSTGNCKSRKGL-TETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDY 180

Query: 184 IAALQMQVRAMTAVAELLAGA 198
           IAAL+MQVRAM A+AELL  A
Sbjct: 181 IAALEMQVRAMEALAELLTAA 198

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BLAST of Lcy03g000680 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           M +++S++E P ++ S   R  KR    S   +  +  + S +   RWR+E +Q+IYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVEALHRV---NQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKL 120
           L +AL +V   +  S S    +   G+ VRE ADR LAV+A+G+T WSRA+L NR+ LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKLKKAK-------------PAGNCSRPKKLKI-RSETKKLPAVQRKVRTLGRLVPGCRK 180
           +K ++ +              + N SR +++ + R   K +P V RKVR LGRLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEATDYIAALQMQVRAMTAVAELLA 196
            S P +LEEATDYI AL+MQVRAM ++ +LL+
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

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BLAST of Lcy03g000680 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31
Identity = 93/210 (44.29%), Postives = 132/210 (62.86%), Query Frame = 0


Query: 4   IVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVE 63
           + + L +P  + S + R  ++RK +S   + E   + S     +WR+E +QQIYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISL-EKWRSEKQQQIYSTKLVH 66

Query: 64  ALH--RVNQKSVSPPARSSI--DGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKK 123
           AL   R++Q+  S  + SSI   GR VRE ADR LAVAA+GKT WSRA+L+  + LK +K
Sbjct: 67  ALRELRISQQP-SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRK 126

Query: 124 LKKAKPAGNCS--------RPKKLK---IRSETKKLPAVQRKVRTLGRLVPGCRKISFPN 183
            K+ + +   +        R KK +   +R + K LPAVQRKV+ L RLVPGCRK S P 
Sbjct: 127 HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEATDYIAALQMQVRAMTAVAELLAGAP 199
           +LEE TDYIAA++MQ+R MTA+   ++ +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

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BLAST of Lcy03g000680 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-23
Identity = 72/174 (41.38%), Postives = 102/174 (58.62%), Query Frame = 0


Query: 23  KRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVEALHRVNQKSVSPPARSSID 82
           +R ++ SE        A      RRWR  + Q++YS KL +AL R  + +          
Sbjct: 45  RRSRVSSEE-------APVRHLSRRWRATTAQKVYSLKLYDALQRSRRSAT--------- 104

Query: 83  GRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKLKKAKPAGNCSRPKKLKIRS-ET 142
              VR+TAD+VLA  A+G TRWSRA+L +R    L++ +  KPA   +   +    S   
Sbjct: 105 ---VRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRR 164

Query: 143 KKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAALQMQVRAMTAVAELLA 196
           +KL AV  +VR LG LVPGCR+ + P LL+E  DYIAAL+MQVRAMTA++++L+
Sbjct: 165 RKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILS 199

[Close]

BLAST of Lcy03g000680 vs. ExPASy TrEMBL
Match: A0A6J1HC54 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111461990 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 175/209 (83.73%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAI SNLEE R+SD T QRP KRRKIESENQAAE   A STD  RRWRTE+EQQIYSSK
Sbjct: 1   MDAIASNLEESRSSDFTEQRPRKRRKIESENQAAEICSARSTDLKRRWRTETEQQIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LVEALHRV +++ SPPA+SSI+GRKVRETAD VLAVAAKGKTRWSRA+LTNRL+LKLKK 
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKKH 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KKAKPAGNC RPKK+KIR ET+KLP VQRKV+TLGRLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKVKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPAD-RQSFRTNS 209
           QMQVRAMTAVAELLAG PAD +QSFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Lcy03g000680 vs. ExPASy TrEMBL
Match: A0A6J1HY72 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111467921 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.9e-82
Identity = 174/209 (83.25%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAI SNLEE R+ D T QRPSK RKIESENQAAE   A STD  RRWRTESEQQIYSSK
Sbjct: 1   MDAIASNLEESRSFDFTEQRPSKCRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LVEALHRV +++ SPPA+SSI+GRKVRETAD VLAVAA+GKTRWSRA+LTNRL+LKLK  
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAEGKTRWSRAILTNRLELKLKNH 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KKAKPAGNC RPKKLKIR ET+KLP VQRKV+TLGRLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKLKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPAD-RQSFRTNS 209
           QMQVRAMTAVAELLAG PAD +QSFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Lcy03g000680 vs. ExPASy TrEMBL
Match: A0A6J1EU06 (transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111437734 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.5e-80
Identity = 169/208 (81.25%), Postives = 184/208 (88.46%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MD I+S LEE RNSDS  +RP KRRKIESEN+ A+  GAESTD   RWRTESEQ IYSSK
Sbjct: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LV+ALHR++QKS SP ARSSI GRKVR+TADRVLAVAAKGKTRWSRA+L+NRLDLKLKK 
Sbjct: 61  LVQALHRISQKSASPLARSSISGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KK KPAGNC   KKL++ S+T+KLPAVQRKVRTL RLVPGCRKISFPNLLEEATDYIAAL
Sbjct: 121 KKVKPAGNCRWTKKLEV-SKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPADRQSFRTNS 209
           QMQVRAMTAVAE+L GAPADRQSFRTNS
Sbjct: 181 QMQVRAMTAVAEILGGAPADRQSFRTNS 207

[Close]

BLAST of Lcy03g000680 vs. ExPASy TrEMBL
Match: A0A6J1JFX6 (transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111486520 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.0e-79
Identity = 167/208 (80.29%), Postives = 184/208 (88.46%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAIVS + EPRNSDS  +RP KRRKIESEN+  +  GAESTD   RWRTE EQ IYSSK
Sbjct: 1   MDAIVSKMGEPRNSDSMEKRPCKRRKIESENRMPDIHGAESTDLITRWRTELEQYIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LV+ALHR++QKS  P ARSSI+GRKVR+TADRVLAVAAKGKTRWSRA+L+NRLDLKLKK 
Sbjct: 61  LVQALHRISQKSALPLARSSINGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KK KPAGNC   KKL++  +T+KLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL
Sbjct: 121 KKVKPAGNCRWTKKLEV-PKTRKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPADRQSFRTNS 209
           QMQVRAMTAVAE+LAGAPADRQ+FRTNS
Sbjct: 181 QMQVRAMTAVAEILAGAPADRQNFRTNS 207

[Close]

BLAST of Lcy03g000680 vs. ExPASy TrEMBL
Match: A0A0A0LVP8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G555600 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.0e-66
Identity = 158/211 (74.88%), Postives = 170/211 (80.57%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTA-QRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSS 60
           MD I SNL+   +SD T  QRPSKRRKI S   + +    ES D  RRW TESE +IYSS
Sbjct: 3   MDPISSNLQHLTSSDFTEDQRPSKRRKIHSPEISVD----ESADSIRRWTTESEHRIYSS 62

Query: 61  KLVEALHRVN-QKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTN-RLDLKL 120
           KLV+ALHRV  QKS S P+ SSIDGRKVRETADRVLAVAAKGKTRWSRA+LTN RL  KL
Sbjct: 63  KLVDALHRVTAQKSASLPSGSSIDGRKVRETADRVLAVAAKGKTRWSRAILTNPRLQHKL 122

Query: 121 KKLKKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYI 180
           KK KK K  GNCSR KKLKI+ E +KLP VQRKVRTL RLVPGCRKISFPNLLEEA+DYI
Sbjct: 123 KKQKKVKTVGNCSRAKKLKIKYERRKLPTVQRKVRTLSRLVPGCRKISFPNLLEEASDYI 182

Query: 181 AALQMQVRAMTAVAELLAGAPADRQSFRTNS 209
           +ALQMQVRAMTAVAELLAGAP DRQS RTNS
Sbjct: 183 SALQMQVRAMTAVAELLAGAPGDRQSLRTNS 209

[Close]

BLAST of Lcy03g000680 vs. NCBI nr
Match: XP_023516409.1 (transcription factor bHLH149-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 4.9e-84
Identity = 177/209 (84.69%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAI SNLEE R+SD T QRPSKRRKIESENQAAE   A STD  RRWRTESEQQIYSSK
Sbjct: 1   MDAIASNLEESRSSDFTEQRPSKRRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LVEALHRV +++ SPPA+SSI+GRKVRETAD VLAVAAKGKTRWSRA+LTNRL+LKLK  
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKNH 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KKAKPAGNC RPKKLKIR ET+KLP VQRKV+TLGRLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKLKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPAD-RQSFRTNS 209
           QMQVRAMTAVAELLAG PAD +QSFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Lcy03g000680 vs. NCBI nr
Match: KAG6590495.1 (Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024025.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 176/209 (84.21%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAI SNLEE R+SD T QRP KRRKIESENQAAE   A STD  RRWRTESEQQIYSSK
Sbjct: 1   MDAIASNLEESRSSDFTEQRPRKRRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LVEALHRV +++ SPPA+SSI+GRKVRETAD VLAVAAKGKTRWSRA+LTNRL+LKLKK 
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKKH 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KKAKPAGNC RPKK+KIR ET+KLP VQRKV+TLGRLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKVKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPAD-RQSFRTNS 209
           QMQVRAMTAVAELLAG PAD +QSFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Lcy03g000680 vs. NCBI nr
Match: XP_022961410.1 (transcription factor bHLH149-like [Cucurbita moschata])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 175/209 (83.73%), Postives = 189/209 (90.43%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAI SNLEE R+SD T QRP KRRKIESENQAAE   A STD  RRWRTE+EQQIYSSK
Sbjct: 1   MDAIASNLEESRSSDFTEQRPRKRRKIESENQAAEICSARSTDLKRRWRTETEQQIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LVEALHRV +++ SPPA+SSI+GRKVRETAD VLAVAAKGKTRWSRA+LTNRL+LKLKK 
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAKGKTRWSRAILTNRLELKLKKH 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KKAKPAGNC RPKK+KIR ET+KLP VQRKV+TLGRLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKVKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPAD-RQSFRTNS 209
           QMQVRAMTAVAELLAG PAD +QSFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Lcy03g000680 vs. NCBI nr
Match: XP_022968790.1 (transcription factor bHLH149-like [Cucurbita maxima])

HSP 1 Score: 314.7 bits (805), Expect = 6.0e-82
Identity = 174/209 (83.25%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MDAI SNLEE R+ D T QRPSK RKIESENQAAE   A STD  RRWRTESEQQIYSSK
Sbjct: 1   MDAIASNLEESRSFDFTEQRPSKCRKIESENQAAEICSARSTDLKRRWRTESEQQIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LVEALHRV +++ SPPA+SSI+GRKVRETAD VLAVAA+GKTRWSRA+LTNRL+LKLK  
Sbjct: 61  LVEALHRVTRRTASPPAKSSINGRKVRETADTVLAVAAEGKTRWSRAILTNRLELKLKNH 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KKAKPAGNC RPKKLKIR ET+KLP VQRKV+TLGRLVPGCRKISFPNLL+EATDYIAAL
Sbjct: 121 KKAKPAGNCFRPKKLKIRYETRKLPTVQRKVQTLGRLVPGCRKISFPNLLDEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPAD-RQSFRTNS 209
           QMQVRAMTAVAELLAG PAD +QSFRTNS
Sbjct: 181 QMQVRAMTAVAELLAGTPADQQQSFRTNS 209

[Close]

BLAST of Lcy03g000680 vs. NCBI nr
Match: XP_022931562.1 (transcription factor bHLH149-like [Cucurbita moschata] >KAG7022395.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.8 bits (787), Expect = 7.3e-80
Identity = 169/208 (81.25%), Postives = 184/208 (88.46%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           MD I+S LEE RNSDS  +RP KRRKIESEN+ A+  GAESTD   RWRTESEQ IYSSK
Sbjct: 1   MDVILSKLEELRNSDSMEERPCKRRKIESENRMADFHGAESTDLRTRWRTESEQYIYSSK 60

Query: 61  LVEALHRVNQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKKL 120
           LV+ALHR++QKS SP ARSSI GRKVR+TADRVLAVAAKGKTRWSRA+L+NRLDLKLKK 
Sbjct: 61  LVQALHRISQKSASPLARSSISGRKVRDTADRVLAVAAKGKTRWSRAILSNRLDLKLKKQ 120

Query: 121 KKAKPAGNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDYIAAL 180
           KK KPAGNC   KKL++ S+T+KLPAVQRKVRTL RLVPGCRKISFPNLLEEATDYIAAL
Sbjct: 121 KKVKPAGNCRWTKKLEV-SKTRKLPAVQRKVRTLSRLVPGCRKISFPNLLEEATDYIAAL 180

Query: 181 QMQVRAMTAVAELLAGAPADRQSFRTNS 209
           QMQVRAMTAVAE+L GAPADRQSFRTNS
Sbjct: 181 QMQVRAMTAVAEILGGAPADRQSFRTNS 207

[Close]

BLAST of Lcy03g000680 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 3.7e-37
Identity = 101/201 (50.25%), Postives = 130/201 (64.68%), Query Frame = 0


Query: 4   IVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVE 63
           +V +L     +   + R  K R  E+     E R        +RW+T   QQIY+ KLVE
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESL-KRWKTNRVQQIYACKLVE 60

Query: 64  ALHRVNQKSVSPPARSSID------GRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKL 123
           AL RV Q+S S  + +  D       R++R+TADRVLA +A+G TRWSRA+L +R+  KL
Sbjct: 61  ALRRVRQRS-STTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKL 120

Query: 124 KKLKKAKPA-GNCSRPKKLKIRSETKKLPAVQRKVRTLGRLVPGCRKISFPNLLEEATDY 183
           KK +KAK + GNC   K L   +   KLPAV+RK++ LGRLVPGCRK+S PNLL+EATDY
Sbjct: 121 KKHRKAKKSTGNCKSRKGL-TETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDY 180

Query: 184 IAALQMQVRAMTAVAELLAGA 198
           IAAL+MQVRAM A+AELL  A
Sbjct: 181 IAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of Lcy03g000680 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.3e-33
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           M +++S++E P ++ S   R  KR    S   +  +  + S +   RWR+E +Q+IYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVEALHRV---NQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKL 120
           L +AL +V   +  S S    +   G+ VRE ADR LAV+A+G+T WSRA+L NR+ LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKLKKAK-------------PAGNCSRPKKLKI-RSETKKLPAVQRKVRTLGRLVPGCRK 180
           +K ++ +              + N SR +++ + R   K +P V RKVR LGRLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEATDYIAALQMQVRAMTAVAELLA 196
            S P +LEEATDYI AL+MQVRAM ++ +LL+
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Lcy03g000680 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 9.3e-33
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 0


Query: 1   MDAIVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSK 60
           M +++S++E P ++ S   R  KR    S   +  +  + S +   RWR+E +Q+IYS+K
Sbjct: 1   MASLISDIEPPTSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAK 60

Query: 61  LVEALHRV---NQKSVSPPARSSIDGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKL 120
           L +AL +V   +  S S    +   G+ VRE ADR LAV+A+G+T WSRA+L NR+ LK 
Sbjct: 61  LFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKF 120

Query: 121 KKLKKAK-------------PAGNCSRPKKLKI-RSETKKLPAVQRKVRTLGRLVPGCRK 180
           +K ++ +              + N SR +++ + R   K +P V RKVR LGRLVPGC K
Sbjct: 121 RKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGK 180

Query: 181 ISFPNLLEEATDYIAALQMQVRAMTAVAELLA 196
            S P +LEEATDYI AL+MQVRAM ++ +LL+
Sbjct: 181 QSVPVILEEATDYIQALEMQVRAMNSLVQLLS 212

[Close]

BLAST of Lcy03g000680 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32
Identity = 93/210 (44.29%), Postives = 132/210 (62.86%), Query Frame = 0


Query: 4   IVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVE 63
           + + L +P  + S + R  ++RK +S   + E   + S     +WR+E +QQIYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISL-EKWRSEKQQQIYSTKLVH 66

Query: 64  ALH--RVNQKSVSPPARSSI--DGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKK 123
           AL   R++Q+  S  + SSI   GR VRE ADR LAVAA+GKT WSRA+L+  + LK +K
Sbjct: 67  ALRELRISQQP-SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRK 126

Query: 124 LKKAKPAGNCS--------RPKKLK---IRSETKKLPAVQRKVRTLGRLVPGCRKISFPN 183
            K+ + +   +        R KK +   +R + K LPAVQRKV+ L RLVPGCRK S P 
Sbjct: 127 HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEATDYIAALQMQVRAMTAVAELLAGAP 199
           +LEE TDYIAA++MQ+R MTA+   ++ +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

[Close]

BLAST of Lcy03g000680 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32
Identity = 93/210 (44.29%), Postives = 132/210 (62.86%), Query Frame = 0


Query: 4   IVSNLEEPRNSDSTAQRPSKRRKIESENQAAETRGAESTDFGRRWRTESEQQIYSSKLVE 63
           + + L +P  + S + R  ++RK +S   + E   + S     +WR+E +QQIYS+KLV 
Sbjct: 7   VSNQLLQPTTTSSNSDRSRRKRKKKSSPSSVEKSPSPSISL-EKWRSEKQQQIYSTKLVH 66

Query: 64  ALH--RVNQKSVSPPARSSI--DGRKVRETADRVLAVAAKGKTRWSRAMLTNRLDLKLKK 123
           AL   R++Q+  S  + SSI   GR VRE ADR LAVAA+GKT WSRA+L+  + LK +K
Sbjct: 67  ALRELRISQQP-SSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRK 126

Query: 124 LKKAKPAGNCS--------RPKKLK---IRSETKKLPAVQRKVRTLGRLVPGCRKISFPN 183
            K+ + +   +        R KK +   +R + K LPAVQRKV+ L RLVPGCRK S P 
Sbjct: 127 HKRQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPV 186

Query: 184 LLEEATDYIAALQMQVRAMTAVAELLAGAP 199
           +LEE TDYIAA++MQ+R MTA+   ++ +P
Sbjct: 187 VLEETTDYIAAMEMQIRTMTAILSAVSSSP 214

The following BLAST results are available for this feature:

BLAST of Lcy03g000680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80482	5.2e-36	50.25	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9C8Z9	1.3e-31	41.51	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
Q9LSN7	3.8e-31	44.29	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9M9L6	1.0e-23	41.38	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of Lcy03g000680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HC54	1.2e-83	83.73	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111461990 ...	[more]
A0A6J1HY72	2.9e-82	83.25	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111467921 PE...	[more]
A0A6J1EU06	3.5e-80	81.25	transcription factor bHLH149-like OS=Cucurbita moschata OX=3662 GN=LOC111437734 ...	[more]
A0A6J1JFX6	3.0e-79	80.29	transcription factor bHLH149-like OS=Cucurbita maxima OX=3661 GN=LOC111486520 PE...	[more]
A0A0A0LVP8	1.0e-66	74.88	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G555600 PE=4 S...	[more]

BLAST of Lcy03g000680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516409.1	4.9e-84	84.69	transcription factor bHLH149-like [Cucurbita pepo subsp. pepo]	[more]
KAG6590495.1	1.1e-83	84.21	Transcription factor basic helix-loop-helix 149, partial [Cucurbita argyrosperma...	[more]
XP_022961410.1	2.4e-83	83.73	transcription factor bHLH149-like [Cucurbita moschata]	[more]
XP_022968790.1	6.0e-82	83.25	transcription factor bHLH149-like [Cucurbita maxima]	[more]
XP_022931562.1	7.3e-80	81.25	transcription factor bHLH149-like [Cucurbita moschata] >KAG7022395.1 Transcripti...	[more]

BLAST of Lcy03g000680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09250.1	3.7e-37	50.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.1	9.3e-33	41.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	9.3e-33	41.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G17100.1	2.7e-32	44.29	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	2.7e-32	44.29	sequence-specific DNA binding transcription factors	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	PANTHER	PTHR33124:SF69	TRANSCRIPTION FACTOR BHLH149	coord: 15..203
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 15..203
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 131..180 score: 9.400527
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 138..189 e-value: 1.63668E-17 score: 71.1144
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 133..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g000680.1	Lcy03g000680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding