Lcy03g000080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g000080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	methyl-CpG-binding domain protein 4-like protein
Location	Chr03: 243870 .. 250535 (-)
RNA-Seq Expression	Lcy03g000080
Synteny	Lcy03g000080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATAATTTAGCCAAAAATAAATAAGGTGATTTCAGTCAAATAGCTGATAGCTCACAAGAGAAGCGCGCCAAGTTTATGAACCGATCATTTTCCCGTTACGAGGCTAATCGCGCCCCGGTGAATGCTCTTCCTTTCCTGCAGCCGCCATGATTTCCAACCTCTCCTCTCCTTCATCTTCTTCATATCCCGACGATTTGTTTTCTCAATTCGCCTTTCGAGGTACTTCCTGCTCCAGATTTCGCTTTCCTTCTTCCAAATGTCCCGCCAAATCGAATCAAGAAAACCCTACGGCGGAAAATCTTACCCAAAAGAGGAGGATTCTCATGGCGCAGGCCACTCCAATTTCAGCTCTCCAGGATCTCCAAAATTCAGAACCTAATCAACAGAAACAATCCTTTTGGCATGAGATTCCCATTTTGTCTATTGAGGATCTTCAAGAAGTTCCACCCGATCACCAGTCTTCTCAACCGAAGCGTAACATTCCGGTATTACCCCTAGAGGATCCCCGAGAAGTTTCGCCTAACACCCAATCTTCAGAAGCGGAGAGAGGTTTAGCGCACGAACCTCCTATATTAACTCTAGAGGATCTTCAAAATGCGAAAGCAGACCATCAACCGGCAAAAAAACCTCCACTGGCGCGTAGGGTCTTACAATTTTACCGGAAGTTCGGATTTGATCAACAAATGGTGCAAAGAACTCCGCCTTCTGTCCGAAATTCAGTACCAGTTCAACAAGGTGTACGTGTAGTTTCGCGTTATTTCCAGAATTCAAAATCATCTCAACAAGGAGAACGAATTGTCTCACGCTACTTTCAAAACCCGGAGGTTGTACAAGCAGCCCATAATGAGGATGGGGATGCCAATTTCACGGAGCAGCCAAGCAAAAGATCGATGGTGGGGGACTACAGCAAAAGGAGGAGGAAAGACGTAGCTCCCAGCTCTGATAATTCAAAAGCAAATCAACATTCAATGGGAAAGACTTCGCGCTCTGTTCAAAAGTCAGGAAGAGATAAACGAGTGCGAATTGTTTCGCGCTATTTCCAAAATTCAGAAAAGAGTCATGAAGCAGAGCAAAATGTTTCACGTACTTTACAAAATTTAAATTCAAATCAACAAGGAGAGCGAGTAGTCTCACGTTTCTTTCAAAATTCAGCAAAACAACAAGTAGTGAACAATGAGCAAGAGGTTGTAGAGCAGCCAAATCAGTGTGTAAAACCTGTTAAAAGAATCCGTGAACCGGCCAAAGAAAGGAAACAGAGGGATAAAAGTTCTGCCAGGCCTAGATCCAATCTTCCTGCTGCCGAGTTGTTTTTGGAAGCTTATAGAAGAAAATCCGCAGATGATACATGGAAGCCTCCTCCCTCTGGAATTCGCCTTCTCCAACAGGATCATGCGTACGACCCTTGGAGGGTTCTAGTCATATGTATGCTCCTTAACCGTACATCTGGGCAGCAGGTATTTACCATCCGCTATCCTATTACTCGATCTTGTATGCAATTTCCAATTTCATACCGTACTATATTTTCCCCATAGCACATAAACTTGATTGGTTTTCATTACAGTTTTGCTACTCCACGACTATGCAGCAGTATTGGACTTTCATATATGAAGTTCAACGACATCTTTGAATTGAATAAACAAGAAAAGTGGATAAACATTATCTCATATCAACCTACTCAGTTACCATATTCACTTTGTCCTTTGAAGATATTCTGTTAGGTATCAAGAGTATTCTTTACGTATGGAATTATAGTATTCTCCAATACTCACTTCCCTTCCCAAATCACAACATACCATCAGCTACCTATCTAATTCATATTTCCTGGGTCCCACAGTAATGCAATATGCACAATACCAAGTAGTAGACCTACCCCTCACTTTGTTACGTGAATATACTTTAAGAACGGGTGGGGGGTCTATTAGTTTACAAAGAATTGTTTTGGGGAATTTGGAGGGACAGGAACCAAAGGTTAATTGAAGAGGATAATAGGCTGAAACTAATTAGGCATCAAACTTCAACTTTGTTGCTATTTCTAGTGAATTTTATTAGGTATCCAGAATACTATAATTCCATACATCAAAGAATACTCTTATTAGACATCTCCTTTTGGGGAATAGGGAAATCTTTTGTGGCAGGCTGGAATTTGTGCTATTGTTTGGGTGTGTGGGGTGATTGGGTGAGAGAAACAATAGGAGTATAGGACCTTTAGGGGGATGGATAGAAAATATTATGTTTCTCTTTAGGCGTTGGTGACGCATCTTTTTTGTAATTTTCCTATAGGTCTCATTCTAGCCCCTTTATCTAATACGATCTCTTTTTGGGGGCTTTTTTTTTTTTTTTTTTTGGGTATGTTCTTATATTCTTTCTTTTTTTTTTTCCTCAATGGAAGTATGGTTCTTTATTGGAAAAAAAAAAATTAGGCATCAAACATCAACTTGCTATTTCTAGTGAATTTTGTATTATTCTTCAAGCGTGATTAATTGAACTCTTGTTCCCTTGTTTTCTTGTAAACTCTTGAAGGGATTTATTTATTTTTTGGTTGTAAGTTGTAACTGTTCAAATATCAATGAAAACTTTGTCTTGTGTTTGAAAGAAAATCTAAAAAATTTTAGTCTGACCTGTCATTTTCATAATTGCAGGCAAAAGACGTGATACCTAAACTCTTCACTTTGTGTCCTAATCCAAAGGCTGCTTTGGAGGTATCACATGAGCAGATAGAAGATATTATACGACCTCTTGGTTTTCAAAGAAAAAGATCGCGCACAATGCAACGATTGTCTGAGATGTATTTACAAGAAAGTTGGAGTCATGTCACTCAGCTTCCTGGCGTTGGCAAGTAATTTAGACTATCCTTATACACTTTTTGGTTTGCTTTTCTGTTTTTCTATCTGTTCGGTGCTGATTTTAGTGGTGTTCCAAGATGAATTCATCCATCATTAAAGCCTTATGGTGGTGGTGAAACACAAGCACCTTCTCATTTATCATGTATGGCTGCTTGGGAATATGTCTGCTTTCTCTTAATATGGAATGGAAGGGGGAGGGGTAGTGGTTTTGGATGACATTAGGTGTTTGTTAGGGTCCCGATACTAATCCCTACTAAGCTGCACACTAAACTCAAATAATGCACCAGAAAACAGAATAATAGATAATATAGGTCCTTAATAGGACGGTTCCATTCATCGACTTCAGTGTTCATAGAATACACAGAGAGACGAAGTAGCTTACCACCTTTCGAGAGGATGACACTCTCCTAACTCTATCTCACTGGACAGAGATACAAAATCACATAAAACAAGCATAAAAACTTAAGATAATAACAGAAAGACTTAAATACTCGATGGAACACTGAACACATCATGGAGAGGGTGAATTTCCACTTCTAACCCTCCTTACATAAGTATTAATCACGAGGCCTTACAGTGTTATTTTCTTTTCCCTTTTGGCTCGCAAAAGAACTTTTCTTCCTTGTCTTTCGGATACACCTAGGCAAAAGTATTCTTATTCTTCAAAAACCAAACCAGCCATTTGTTAGACCCCCAACCATAAGGACTGATGCTACAAGGGGCAATAAGGGAATTTCTTCCTAAGTCTCATGTGTCTGTTTGTATCCCTTACTGTACGGTTTGTTTTGGATTTTAGGTTAGTCTTTTTAGCTCGGGGAGGGAGCTGGGTTATGTTTTATGTCTTATTTTATGTTGTTGATCTTTTGATGATCTTAACTAGAAGGAGAGAACCACCCTCTCGAAATGCGAGTGTTTGTTGTCATTCAGCCTTTAGGCTATTTTGGAGATCAATACTAAATTGTAAGGAAGATACCTTACACGTTAGCGTTTTTGTGTGGACTACCAAGCACTAAACAATGTCACCATCCTAAACAAATTTTCGATTCCAGTAGCGGAGGAACTGCTTGACGAACTCCATGGATCAAGAATATACTCAAAGATTGACTTTAAGTCCAAACACCATCAAATTCGGGTGCACGAGGAGGACATCTCGAAAACATCTTTTTGCTCTCACAAGGGTCACTGCGAATTTCTGGTTATGCCCTTTGGTCTTACCAATCCCCTGCTGCATTTCAAGCGTTGATGAAATGAATATTCAAACCATTCCTCCGAAGATTTGTCCTAGTGTTCTTTTATGACATCTTGGTATACAGTCCGAACCTTGAATCTCATGTGACCCACTTGTTAAATATACTAAATAGACAATACTAAATGACAAAAATAATAAATTTTAAAAGTGAAATACATTAAACTCATTTTTTGAAGCATACAAATGCATAAACTTATTGATTTTGAATTTTCTTCTTGCTAAGAAGACGAACACGGACACAGACACGCCAACAACACGACACGGACATGGCGACACGTCAATTTCTAAAAATATGGGACACGATACGTTGTGGACACGTTATTAATTTTATATATACATACATATATATATATATATATATATATATGTTGTCATAGTAATATTTCTAAATAAATCAACCATACAAATTTAATATAACAAAACAATATGTGCTTCATTAATAATTTAATAGCTAATACTTAATACATAAACGATTATGCTAAGCATTGTTGTCCAACATAAAATTACAATACAAGTTCAAAGTACTAGAAAGAAATTACATCTTACACATAAAACAAACTAAAACTTTTAGAGTTTTATGTTTTAAACTATAAAAATGGGTTGGGCAATCAAAGGAGGGAGAGATGCAATTGGGTGGCCTTTTTAATTGTATTTCAGGCGGGTTGGGCTTTGGGCTACAGAAAGCAAGTTCTGATTTGGTGTGTCTGGAACGTGTTCAAATTTTTTTTTTTTAAAAAGCCACGCAAAATAGCGTGTTCGACACATGTCAGGCATGTGTGGGAGCAAATCCATGTCAGATACGTGTCTGACACGGACGCTTCATACAAAATGAAGTGTCCGTGCTTCCTAGCGCTCTTGTATAAAAATGATATATATATATATATATATATATATATTTTAAAAAATGTATATTTTACTAAACGTATCCATGTCTTGCCTGTATCCTAGATTTAAAAAAAATGACGCGTCACCGGGTCCGTGTTGTGCCTTAACTGTGTCTCGTGTCCATATCCATACTTCTTAGGACTTATACACACCTTGAAAACACGTTGTTGGATACCCTGGGGCAATAGGAGACCTATGCTAGAAGGGGCAATAGGGGAATTTCCTCCTAAGTCTCATGTGTTCATTTGTAGTCATTATTGTACGGTCTATTTTGTGCTTTTGGGTTAGTCTTTTTAGCTCGGGGAGAGAACTGGAGTTATGTTTTATGTCTTATTATATGTTGTTGATCTTTTGGTGATCTTAACTGTAAGGAGCAAACTGCTCTCTCGAAAGGGGAATGATTGTTGTAATTCAGTCTTTAGGTTCTTTTGGAGATCAATACTAAATCGTAGGGAAGATACCTTATGCCATGGATACTTTCATAATTTAAGCTTATGTTGGTTTGGAAAATATTTTAGTCAACCTAATATTTTTGGTGTAAGAGTGTATAAAGAGTGAGGAAATGTGTCCTCAGAAATAGCCTTAGGAAATTAGTCGGGGCCTAGGGGAGCACACATACTAATATATAGTAACGAAATATGCACGTGAAGGTAGGTTGGTTTTTGTGTGAGTGGGTGGGAGAGAAGTTAGCACTCTTGATCGGACTAGACTAGTGAATGTACTCTTTACTTCATGTTACGTGCATGTTGAGGGTACTTTTGGCTTAAGTTAGTAAATTGGGGGAGTGAAGGAATCTCTAGAATCTTTCCCTGGATTTGTTCGTACTTGTTTACTTCTGAGTGTTAGTTGGAACACTATGCAGTCTACCTTGTTTCAGAGGTTTGAGAATTTATGGGAGCTATGTATTTGAGAGCTTAGGGAAACAATAGTTACTTGGATTACCTCAGTTTGCATATTTCTTCTTTTGTTTCTTATTGTTCTATAGATATTATGATATTGGCCTTCTTTGAATCATGTTGCTTTACATAAATAAATTCCAACAGATATGTCCTCGCATTACCAACTTTTATTGGCTTGTCCAGCCCGACTTTCTACGTTTTATTATTGAGCTTAGTACTTGTGCTAAAGTTTAGATTCATTTGAGACAGGTACGGAGCTGATGCACATGCAATATTCTGCACTGGATATTGGAATGAAGTACTACCTAAAGATCACATGCTTAATTATTATTGGGAGTTTCTCCACAGCATAAAACATTTGCTCTGATCTTATCTGATTGTAGATGGTTTTGTACGAGAGCGGAAGTTGTAGATTTCAGGGTCTACTTCCTATATATATTTTGGATCGTTACTTTGACAGAGATTCTTTTGTGCTCTCGTTTTTGTAAATGTTCTATTGGGTGGAAGGGCCCCTAGGAAGGGGTTTGGTTGGGAACTATTTGAATTTGTTTACGCTCTGTGGGGCCCCTTATTATTAACACATATGCTGGGAAGGGGAGAAATGGAAATTCTCCTCCAACAGCTAATTAGACTGTAGCTTGTACTGTTTTATGTTGTCTGGAAAGATCTGGGGTTGGTAAGGAGGGTAGCTTACCAGTTGACCTAGGACTGGATCTCTTGTAACAAGACAGGCTGTAACCTTCGCTTTTGATTATCAGTTTAGTAAAGAAGGAAGGTACCTTACATGCG

mRNA sequence

TTATAATTTAGCCAAAAATAAATAAGGTGATTTCAGTCAAATAGCTGATAGCTCACAAGAGAAGCGCGCCAAGTTTATGAACCGATCATTTTCCCGTTACGAGGCTAATCGCGCCCCGGTGAATGCTCTTCCTTTCCTGCAGCCGCCATGATTTCCAACCTCTCCTCTCCTTCATCTTCTTCATATCCCGACGATTTGTTTTCTCAATTCGCCTTTCGAGGTACTTCCTGCTCCAGATTTCGCTTTCCTTCTTCCAAATGTCCCGCCAAATCGAATCAAGAAAACCCTACGGCGGAAAATCTTACCCAAAAGAGGAGGATTCTCATGGCGCAGGCCACTCCAATTTCAGCTCTCCAGGATCTCCAAAATTCAGAACCTAATCAACAGAAACAATCCTTTTGGCATGAGATTCCCATTTTGTCTATTGAGGATCTTCAAGAAGTTCCACCCGATCACCAGTCTTCTCAACCGAAGCGTAACATTCCGGTATTACCCCTAGAGGATCCCCGAGAAGTTTCGCCTAACACCCAATCTTCAGAAGCGGAGAGAGGTTTAGCGCACGAACCTCCTATATTAACTCTAGAGGATCTTCAAAATGCGAAAGCAGACCATCAACCGGCAAAAAAACCTCCACTGGCGCGTAGGGTCTTACAATTTTACCGGAAGTTCGGATTTGATCAACAAATGGTGCAAAGAACTCCGCCTTCTGTCCGAAATTCAGTACCAGTTCAACAAGGTGTACGTGTAGTTTCGCGTTATTTCCAGAATTCAAAATCATCTCAACAAGGAGAACGAATTGTCTCACGCTACTTTCAAAACCCGGAGGTTGTACAAGCAGCCCATAATGAGGATGGGGATGCCAATTTCACGGAGCAGCCAAGCAAAAGATCGATGGTGGGGGACTACAGCAAAAGGAGGAGGAAAGACGTAGCTCCCAGCTCTGATAATTCAAAAGCAAATCAACATTCAATGGGAAAGACTTCGCGCTCTGTTCAAAAGTCAGGAAGAGATAAACGAGTGCGAATTGTTTCGCGCTATTTCCAAAATTCAGAAAAGAGTCATGAAGCAGAGCAAAATGTTTCACGTACTTTACAAAATTTAAATTCAAATCAACAAGGAGAGCGAGTAGTCTCACGTTTCTTTCAAAATTCAGCAAAACAACAAGTAGTGAACAATGAGCAAGAGGTTGTAGAGCAGCCAAATCAGTGTGTAAAACCTGTTAAAAGAATCCGTGAACCGGCCAAAGAAAGGAAACAGAGGGATAAAAGTTCTGCCAGGCCTAGATCCAATCTTCCTGCTGCCGAGTTGTTTTTGGAAGCTTATAGAAGAAAATCCGCAGATGATACATGGAAGCCTCCTCCCTCTGGAATTCGCCTTCTCCAACAGGATCATGCGTACGACCCTTGGAGGGTTCTAGTCATATGTATGCTCCTTAACCGTACATCTGGGCAGCAGGCAAAAGACGTGATACCTAAACTCTTCACTTTGTGTCCTAATCCAAAGGCTGCTTTGGAGGTATCACATGAGCAGATAGAAGATATTATACGACCTCTTGGTTTTCAAAGAAAAAGATCGCGCACAATGCAACGATTGTCTGAGATGTATTTACAAGAAAGTTGGAGTCATGTCACTCAGCTTCCTGGCGTTGGCAAGTACGGAGCTGATGCACATGCAATATTCTGCACTGGATATTGGAATGAAGTACTACCTAAAGATCACATGCTTAATTATTATTGGGAGTTTCTCCACAGCATAAAACATTTGCTCTGATCTTATCTGATTGTAGATGGTTTTGTACGAGAGCGGAAGTTGTAGATTTCAGGGTCTACTTCCTATATATATTTTGGATCGTTACTTTGACAGAGATTCTTTTGTGCTCTCGTTTTTGTAAATGTTCTATTGGGTGGAAGGGCCCCTAGGAAGGGGTTTGGTTGGGAACTATTTGAATTTGTTTACGCTCTGTGGGGCCCCTTATTATTAACACATATGCTGGGAAGGGGAGAAATGGAAATTCTCCTCCAACAGCTAATTAGACTGTAGCTTGTACTGTTTTATGTTGTCTGGAAAGATCTGGGGTTGGTAAGGAGGGTAGCTTACCAGTTGACCTAGGACTGGATCTCTTGTAACAAGACAGGCTGTAACCTTCGCTTTTGATTATCAGTTTAGTAAAGAAGGAAGGTACCTTACATGCG

Coding sequence (CDS)

ATGATTTCCAACCTCTCCTCTCCTTCATCTTCTTCATATCCCGACGATTTGTTTTCTCAATTCGCCTTTCGAGGTACTTCCTGCTCCAGATTTCGCTTTCCTTCTTCCAAATGTCCCGCCAAATCGAATCAAGAAAACCCTACGGCGGAAAATCTTACCCAAAAGAGGAGGATTCTCATGGCGCAGGCCACTCCAATTTCAGCTCTCCAGGATCTCCAAAATTCAGAACCTAATCAACAGAAACAATCCTTTTGGCATGAGATTCCCATTTTGTCTATTGAGGATCTTCAAGAAGTTCCACCCGATCACCAGTCTTCTCAACCGAAGCGTAACATTCCGGTATTACCCCTAGAGGATCCCCGAGAAGTTTCGCCTAACACCCAATCTTCAGAAGCGGAGAGAGGTTTAGCGCACGAACCTCCTATATTAACTCTAGAGGATCTTCAAAATGCGAAAGCAGACCATCAACCGGCAAAAAAACCTCCACTGGCGCGTAGGGTCTTACAATTTTACCGGAAGTTCGGATTTGATCAACAAATGGTGCAAAGAACTCCGCCTTCTGTCCGAAATTCAGTACCAGTTCAACAAGGTGTACGTGTAGTTTCGCGTTATTTCCAGAATTCAAAATCATCTCAACAAGGAGAACGAATTGTCTCACGCTACTTTCAAAACCCGGAGGTTGTACAAGCAGCCCATAATGAGGATGGGGATGCCAATTTCACGGAGCAGCCAAGCAAAAGATCGATGGTGGGGGACTACAGCAAAAGGAGGAGGAAAGACGTAGCTCCCAGCTCTGATAATTCAAAAGCAAATCAACATTCAATGGGAAAGACTTCGCGCTCTGTTCAAAAGTCAGGAAGAGATAAACGAGTGCGAATTGTTTCGCGCTATTTCCAAAATTCAGAAAAGAGTCATGAAGCAGAGCAAAATGTTTCACGTACTTTACAAAATTTAAATTCAAATCAACAAGGAGAGCGAGTAGTCTCACGTTTCTTTCAAAATTCAGCAAAACAACAAGTAGTGAACAATGAGCAAGAGGTTGTAGAGCAGCCAAATCAGTGTGTAAAACCTGTTAAAAGAATCCGTGAACCGGCCAAAGAAAGGAAACAGAGGGATAAAAGTTCTGCCAGGCCTAGATCCAATCTTCCTGCTGCCGAGTTGTTTTTGGAAGCTTATAGAAGAAAATCCGCAGATGATACATGGAAGCCTCCTCCCTCTGGAATTCGCCTTCTCCAACAGGATCATGCGTACGACCCTTGGAGGGTTCTAGTCATATGTATGCTCCTTAACCGTACATCTGGGCAGCAGGCAAAAGACGTGATACCTAAACTCTTCACTTTGTGTCCTAATCCAAAGGCTGCTTTGGAGGTATCACATGAGCAGATAGAAGATATTATACGACCTCTTGGTTTTCAAAGAAAAAGATCGCGCACAATGCAACGATTGTCTGAGATGTATTTACAAGAAAGTTGGAGTCATGTCACTCAGCTTCCTGGCGTTGGCAAGTACGGAGCTGATGCACATGCAATATTCTGCACTGGATATTGGAATGAAGTACTACCTAAAGATCACATGCTTAATTATTATTGGGAGTTTCTCCACAGCATAAAACATTTGCTCTGA

Protein sequence

MISNLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILMAQATPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDPREVSPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQMVQRTPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGDANFTEQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNSEKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRIREPAKERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIKHLL

Homology

[Close]

BLAST of Lcy03g000080 vs. ExPASy Swiss-Prot
Match: Q0IGK1 (Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana OX=3702 GN=MBD4L PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 8.1e-49
Identity = 131/336 (38.99%), Postives = 177/336 (52.68%), Query Frame = 0


Query: 198 VRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGDANFTEQPSKRSMVGDYSKRR 257
           VR VS YFQ S  SQQ +              +  +++G +    +  + S     S   
Sbjct: 146 VRRVSPYFQGSTVSQQSKEGCDS--------DSVCSKEGCSKVQAKVPRVSPYFQASTIS 205

Query: 258 RKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNSEKSHEAEQNVSRTLQN 317
           + D    S +     +  G + R V       +VR VS YFQ S  S +  Q   + L+N
Sbjct: 206 QCDSDIVSSSQSGRNYRKGSSKRQV-------KVRRVSPYFQESTVSEQPNQ-APKGLRN 265

Query: 318 LNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRIREPAKERKQRDKSSAR 377
                +    VSR+F     Q                      + E  KE+ +  + +  
Sbjct: 266 YFKVVK----VSRYFHADGIQ----------------------VNESQKEKSRNVRKTPI 325

Query: 378 PRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTSGQQA 437
               L  ++   + Y RK+ D+TW PP S   LLQ+DH +DPWRVLVICMLLN+TSG Q 
Sbjct: 326 VSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQT 385

Query: 438 KDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQRLSEMYLQESWSHVTQL 497
           + VI  LF LC + K A EV  E+IE++I+PLG Q+KR++ +QRLS  YLQESW+HVTQL
Sbjct: 386 RGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQESWTHVTQL 439

Query: 498 PGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFL 534
            GVGKY ADA+AIFC G W+ V P DHMLNYYW++L
Sbjct: 446 HGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 439

[Close]

BLAST of Lcy03g000080 vs. ExPASy Swiss-Prot
Match: O95243 (Methyl-CpG-binding domain protein 4 OS=Homo sapiens OX=9606 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.7e-25
Identity = 51/140 (36.43%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 394 RKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKA 453
           R+ A   W PP S   L+Q+   +DPW++L+  + LNRTSG+ A  V+ K     P+ + 
Sbjct: 431 RRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWKFLEKYPSAEV 490

Query: 454 ALEVSHEQIEDIIRPLGFQRKRSRTMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCT 513
           A       + ++++PLG    R++T+ + S+ YL + W +  +L G+GKYG D++ IFC 
Sbjct: 491 ARTADWRDVSELLKPLGLYDLRAKTIVKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCV 550

Query: 514 GYWNEVLPKDHMLNYYWEFL 534
             W +V P+DH LN Y ++L
Sbjct: 551 NEWKQVHPEDHKLNKYHDWL 570

[Close]

BLAST of Lcy03g000080 vs. ExPASy Swiss-Prot
Match: Q9Z2D7 (Methyl-CpG-binding domain protein 4 OS=Mus musculus OX=10090 GN=Mbd4 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.9e-24
Identity = 49/140 (35.00%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 394 RKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKA 453
           R+ +   W PP S   L+Q+   +DPW++L+  + LNRTSG+ A  V+ +     P+ + 
Sbjct: 405 RRKSFKKWTPPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEV 464

Query: 454 ALEVSHEQIEDIIRPLGFQRKRSRTMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCT 513
           A       + ++++PLG    R++T+ + S+ YL + W +  +L G+GKYG D++ IFC 
Sbjct: 465 ARAADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGIGKYGNDSYRIFCV 524

Query: 514 GYWNEVLPKDHMLNYYWEFL 534
             W +V P+DH LN Y ++L
Sbjct: 525 NEWKQVHPEDHKLNKYHDWL 544

[Close]

BLAST of Lcy03g000080 vs. ExPASy Swiss-Prot
Match: Q7LX22 (Thymine/uracil-DNA glycosylase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) OX=178306 GN=PAE3199 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.1e-08
Identity = 33/97 (34.02%), Postives = 52/97 (53.61%), Query Frame = 0


Query: 416 AYDPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKR 475
           A DPW VLV  +LL +T+ +Q  D+  +     P+P    + S E+I+ II+PLG +  R
Sbjct: 36  AGDPWAVLVAALLLRKTTVKQVVDIYREFLRRYPSPARLADASVEEIKAIIQPLGMEHVR 95

Query: 476 SRTMQRLSEMYLQESWSHV-------TQLPGVGKYGA 506
           +  +++LSE  ++     +         LPGVG Y A
Sbjct: 96  ATLLKKLSEELVRRFNGQIPCDRDALKSLPGVGDYAA 132

[Close]

BLAST of Lcy03g000080 vs. ExPASy Swiss-Prot
Match: Q9YDP0 (Thymine-DNA glycosylase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) OX=272557 GN=APE_0875.1 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-07
Identity = 29/93 (31.18%), Postives = 49/93 (52.69%), Query Frame = 0


Query: 418 DPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSR 477
           DPW +LV   LL +T+ +Q   V  +     PNPKA      +++ ++IRPLG + +R++
Sbjct: 35  DPWAILVAAFLLRKTTARQVVRVYEEFLRRYPNPKALASAREDEVRELIRPLGIEHQRAK 94

Query: 478 TMQRLSEMY-------LQESWSHVTQLPGVGKY 504
            +  L++         +  S   + +LPGVG Y
Sbjct: 95  HLIELAKHIEARYGGRIPCSKEKLKELPGVGDY 127

[Close]

BLAST of Lcy03g000080 vs. ExPASy TrEMBL
Match: A0A6J1EZJ4 (methyl-CpG-binding domain protein 4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437878 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 3.2e-218
Identity = 403/544 (74.08%), Postives = 455/544 (83.64%), Query Frame = 0


Query: 1   MISNLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILM 60
           M  NLS PSSSS+PD LFSQFAF+G S SRFRFP SKCP++SN++NPT E+ TQKR  LM
Sbjct: 7   MNPNLSPPSSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQKRTTLM 66

Query: 61  AQATPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDP 120
           AQ +PIS L+ LQ SE N QK +   EIPIL IEDLQ+         PKR    L +ED 
Sbjct: 67  AQNSPISTLEVLQTSESNHQKTAAGQEIPILCIEDLQD--------NPKRGSSTLTVEDV 126

Query: 121 REVSPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQM 180
           +EVSP T +SE ER L HEPPILTLED+QNAK+DHQPA +PPLARRVL+FYR+FGFD+Q+
Sbjct: 127 QEVSPKTPTSERERVLVHEPPILTLEDIQNAKSDHQPAIEPPLARRVLRFYRQFGFDEQI 186

Query: 181 VQRTPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHN----EDG 240
           VQ+TPPSVRNS+PVQ+  RVVSR+FQ SKS+QQGERIVSRYFQ+ E+ +AAHN    ED 
Sbjct: 187 VQKTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDEDE 246

Query: 241 DANFTEQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSR 300
           D N T+QP KRS VG Y KRRRKDVA SSDNSKA Q S+ K+SR V++SG DKRVR VSR
Sbjct: 247 DVNVTDQPIKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRFVKESGTDKRVRFVSR 306

Query: 301 YFQNSEKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVK 360
           YFQNSEK+ E E  VS  LQN  + QQGER+VSRFFQ S +Q+VVNN+QEV++ P+QC K
Sbjct: 307 YFQNSEKNPEVEIEVSPPLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAK 366

Query: 361 PVKRIREPAKERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHA 420
            VKRIR+PAKERK RDK SARPR+ L A ELFLEAYRRKS+DDTWKPPPSGIRLLQQDHA
Sbjct: 367 SVKRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHA 426

Query: 421 YDPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRS 480
           YDPWRVLVICMLLNRT+GQQAK+VIPKLFTLCP+PK+ALEVS EQIEDIIRPLG QRKRS
Sbjct: 427 YDPWRVLVICMLLNRTTGQQAKEVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRS 486

Query: 481 RTMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSI 540
            T+QRLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW EVLPKDHMLNYYWEFLHSI
Sbjct: 487 LTIQRLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSI 542

[Close]

BLAST of Lcy03g000080 vs. ExPASy TrEMBL
Match: A0A6J1HWM5 (methyl-CpG-binding domain protein 4-like protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468538 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 3.5e-196
Identity = 365/483 (75.57%), Postives = 409/483 (84.68%), Query Frame = 0


Query: 60  MAQATPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLED 119
           MA  +PIS L+ LQ SE N QK +  HEIPIL IE LQ+         PKR I  L +ED
Sbjct: 1   MALNSPISTLEVLQTSEANHQKTAAGHEIPILCIEYLQD--------DPKREISTLTVED 60

Query: 120 PREVSPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQ 179
            +EVSP T +SE ER LAHEPPILTLEDLQNAK+DHQPA KPPLARRVL+F R+FGFD+Q
Sbjct: 61  VQEVSPKTPTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFCRQFGFDEQ 120

Query: 180 MVQRTPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHN--EDGD 239
           +VQ+TPPSVRNS+PVQ+  RVVSR+FQ SKS+QQGERIVSRYFQ+ E+ +AAHN  ED D
Sbjct: 121 IVQKTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDDD 180

Query: 240 ANFTEQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRY 299
            N T+QP KRS VG Y KRRRKDVA SSDNSKA Q S+ K+SRS++KSG DKRVRIVSRY
Sbjct: 181 VNVTDQPFKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRSIKKSGTDKRVRIVSRY 240

Query: 300 FQNSEKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKP 359
           FQNSEK+ E E  VS +LQN  +NQQ ERVVSRFFQ S + +VVNN+QEV++ P+QC K 
Sbjct: 241 FQNSEKNPEVEIEVSPSLQNSKTNQQEERVVSRFFQKSEEHEVVNNQQEVIQLPSQCAKS 300

Query: 360 VKRIREPAKERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAY 419
           VKRIR+PAKERK RDK SA+PR+ L A ELFLEAYRRKS+DDTWKPPPSGIRLLQQDHAY
Sbjct: 301 VKRIRKPAKERKVRDKVSAKPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAY 360

Query: 420 DPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSR 479
           DPWRVLVICMLLNRT+GQQAK+VIPKLFTLCP+PK+ALEVS EQIEDIIRPLG QRKRS 
Sbjct: 361 DPWRVLVICMLLNRTTGQQAKEVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRSL 420

Query: 480 TMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIK 539
           T+QRLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW EVLPKDHMLNYYWEFLHSIK
Sbjct: 421 TIQRLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSIK 475

Query: 540 HLL 541
           HLL
Sbjct: 481 HLL 475

[Close]

BLAST of Lcy03g000080 vs. ExPASy TrEMBL
Match: A0A1S3CCU6 (methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo OX=3656 GN=LOC103499353 PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 4.2e-173
Identity = 354/540 (65.56%), Postives = 390/540 (72.22%), Query Frame = 0


Query: 4   NLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILMAQA 63
           NL+ PSSSSYP DLFS+F FRGTS SRFRFP    P+KS  +NP     +        Q 
Sbjct: 10  NLTPPSSSSYPHDLFSEFVFRGTSRSRFRFP----PSKSAHQNPNPYQDS-------TQH 69

Query: 64  TPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDPREV 123
           +PIS L DLQ SEPN                        H  S          L  P   
Sbjct: 70  SPISTLYDLQTSEPNNH----------------------HNKS----------LASP--- 129

Query: 124 SPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQMVQR 183
                SSEA+     EPPILTLEDLQN K   Q  KKP LARRVL FYR+FGFD++++Q 
Sbjct: 130 -----SSEAD-----EPPILTLEDLQNGKLPLQSPKKPSLARRVLSFYREFGFDKKLLQA 189

Query: 184 TPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNED--GDANFT 243
           T  SV NS PVQ+G RVVSRYFQNS+S+QQ ERIVSRYF+     +AAH ED   D N T
Sbjct: 190 TSHSVLNSEPVQEGTRVVSRYFQNSRSTQQRERIVSRYFKKSVKERAAHYEDENDDGNLT 249

Query: 244 EQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNS 303
           EQPSKRS     SKRRRKDV PSS NSK N HSMGKTSRSVQKS  D R RIVS YFQ S
Sbjct: 250 EQPSKRS-----SKRRRKDVDPSSVNSKTNHHSMGKTSRSVQKSRTDTRARIVSGYFQYS 309

Query: 304 EKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRI 363
           EKS E ++ VS +LQN  SNQQ E++VSRFF  S KQQ VNN++E  EQ NQC K VKR+
Sbjct: 310 EKSLEMDREVSPSLQNSKSNQQEEKMVSRFFLKSGKQQAVNNQEEATEQLNQCAKSVKRV 369

Query: 364 REPAKERKQRDK-SSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPW 423
           R+P  ERKQ++K SS +PR+ L AAELFLEAYRRKS DDTWKPPPSG RLLQ DHAYDPW
Sbjct: 370 RKPVNERKQKNKTSSTKPRTTLTAAELFLEAYRRKSPDDTWKPPPSGTRLLQHDHAYDPW 429

Query: 424 RVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQ 483
           RVLVICMLLNRTSG+QAK+VIPKLF+LCPNPKA LEVS EQIEDIIRPLG  RKRSRTM 
Sbjct: 430 RVLVICMLLNRTSGRQAKEVIPKLFSLCPNPKATLEVSREQIEDIIRPLGLYRKRSRTMH 488

Query: 484 RLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIKHLL 541
           RLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW+EV PKDHMLNYYW+FLHSIKHLL
Sbjct: 490 RLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWSEVEPKDHMLNYYWDFLHSIKHLL 488

[Close]

BLAST of Lcy03g000080 vs. ExPASy TrEMBL
Match: A0A5D3CU57 (Methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00130 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 4.0e-160
Identity = 334/528 (63.26%), Postives = 374/528 (70.83%), Query Frame = 0


Query: 4   NLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILMAQA 63
           NL+ PSSSSYP DLFS+F FRGTS SRFRFP    P+KS  +NP     +        Q 
Sbjct: 10  NLTPPSSSSYPHDLFSEFVFRGTSRSRFRFP----PSKSAHQNPNPYQDS-------TQH 69

Query: 64  TPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDPREV 123
           +PIS L DLQ SEPN                        H  S          L  P   
Sbjct: 70  SPISTLYDLQTSEPNNH----------------------HNKS----------LASP--- 129

Query: 124 SPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQMVQR 183
                SSEA+     EPPILTLEDLQN K   Q  KKP LARRVL FYR+FGFD++++Q 
Sbjct: 130 -----SSEAD-----EPPILTLEDLQNGKLPLQSPKKPSLARRVLSFYREFGFDKKLLQA 189

Query: 184 TPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNED--GDANFT 243
           T  SV NS PVQ+G RVVSRYFQNS+S+QQ ERIVSRYF+     +AAH ED   D N T
Sbjct: 190 TSHSVLNSEPVQEGTRVVSRYFQNSRSTQQRERIVSRYFKKSVKERAAHYEDENDDGNLT 249

Query: 244 EQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNS 303
           EQPSKRS     SKRRRKDV PSS NSK N HSMGKTSRSVQKS  D R RIVS YFQ S
Sbjct: 250 EQPSKRS-----SKRRRKDVDPSSVNSKTNHHSMGKTSRSVQKSRTDTRARIVSGYFQYS 309

Query: 304 EKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRI 363
           EKS E ++ VS +LQN  SNQQ E++VSRFF  S KQQ VNN++E  EQ NQC K VKR+
Sbjct: 310 EKSLEMDREVSPSLQNSKSNQQEEKMVSRFFLKSGKQQAVNNQEEATEQLNQCAKSVKRV 369

Query: 364 REPAKERKQRDK-SSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPW 423
           R+P  ERKQ++K SS +PR+ L AAELFLEAYRRKS DDTWKPPPSG RLLQ DHAYDPW
Sbjct: 370 RKPVNERKQKNKTSSTKPRTTLTAAELFLEAYRRKSPDDTWKPPPSGTRLLQHDHAYDPW 429

Query: 424 RVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQ 483
           RVLVICMLLNRTSG+QAK+VIPKLF+LCPNPKA LEVS EQIEDIIRPLG  RKRSRTM 
Sbjct: 430 RVLVICMLLNRTSGRQAKEVIPKLFSLCPNPKATLEVSREQIEDIIRPLGLYRKRSRTMH 476

Query: 484 RLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNY 529
           RLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYWN  + +  ++++
Sbjct: 490 RLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWNGFVREAEVVDF 476

[Close]

BLAST of Lcy03g000080 vs. ExPASy TrEMBL
Match: A0A0A0KRW9 (ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G630730 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 9.3e-149
Identity = 312/512 (60.94%), Postives = 356/512 (69.53%), Query Frame = 0


Query: 4   NLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILMAQA 63
           NL+ PSSSSYP DLFS+F FRGTS SRFRFP    P+KS Q++P     +        Q 
Sbjct: 10  NLTPPSSSSYPHDLFSEFVFRGTSRSRFRFP----PSKSAQQDPNPYQDS-------TQH 69

Query: 64  TPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDPREV 123
           +P+S L DLQ  EP+                        H  S                 
Sbjct: 70  SPLSTLHDLQTPEPSNH----------------------HNESL---------------A 129

Query: 124 SPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQMVQR 183
           SP+++         HEPPILTLEDLQN K   Q  K+P LARRVL FYR+FGFD++++Q 
Sbjct: 130 SPSSE--------VHEPPILTLEDLQNGKLPRQSPKQPSLARRVLSFYREFGFDKKLLQA 189

Query: 184 TPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGD--ANFT 243
           T  SV NSVP Q+G RVVSRYFQNS+S+QQ +RIVSRYFQ     + AH ED +   N T
Sbjct: 190 TSHSVLNSVPAQEGTRVVSRYFQNSRSTQQSKRIVSRYFQESVKERTAHYEDENDGGNLT 249

Query: 244 EQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNS 303
           EQPSKRS     SKRRRKDV P SDNSK N HS+GKT+RSVQKSG D +VRIVS YFQ+ 
Sbjct: 250 EQPSKRS-----SKRRRKDVTPGSDNSKTNHHSVGKTARSVQKSGTDTQVRIVSGYFQSY 309

Query: 304 EKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRI 363
           EKS E ++ VS +LQN  SNQQ E+VVSRFF  S KQQ VNN++E  EQ NQC K VKR+
Sbjct: 310 EKSLEMDREVSPSLQNSKSNQQEEKVVSRFFLKSGKQQAVNNQEEATEQLNQCAKSVKRL 369

Query: 364 REPAKERKQRDK-SSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPW 423
           R+P  ERK++DK SS +PR+ L AAELFLEAYRRKS  DTWKPP SG RLLQ DHAYDPW
Sbjct: 370 RKPVNERKEKDKTSSTKPRTTLTAAELFLEAYRRKSPYDTWKPPTSGTRLLQHDHAYDPW 429

Query: 424 RVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQ 483
           RVLVICMLLNRTSGQQAK+VIPKLF+LCPNPKA LEVS EQIEDIIRPLGF RKRSRTM 
Sbjct: 430 RVLVICMLLNRTSGQQAKEVIPKLFSLCPNPKATLEVSREQIEDIIRPLGFYRKRSRTMH 460

Query: 484 RLSEMYLQESWSHVTQLPGVGKYGADAHAIFC 513
           RLSEMYL+ESWSHVTQLPGVGKY A    + C
Sbjct: 490 RLSEMYLKESWSHVTQLPGVGKYLAYPCTLSC 460

[Close]

BLAST of Lcy03g000080 vs. NCBI nr
Match: KAG7022375.1 (Methyl-CpG-binding domain protein 4-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 790.4 bits (2040), Expect = 9.7e-225
Identity = 410/534 (76.78%), Postives = 457/534 (85.58%), Query Frame = 0


Query: 7   SPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILMAQATPI 66
           SP SSS+PD LFSQFAF+G S SRFRFP SKCP++SN++NPT E+ TQKR  LMAQ +PI
Sbjct: 12  SPPSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQKRSSLMAQNSPI 71

Query: 67  SALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDPREVSPN 126
           S L+ LQ SE N QK + WHEIPIL IEDLQ+         PKR I  L +ED +EVSP 
Sbjct: 72  STLEVLQTSEANHQKTAAWHEIPILCIEDLQD--------DPKREISTLTIEDVQEVSPK 131

Query: 127 TQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQMVQRTPP 186
           T +SE ER  AHEPPILTLEDLQNAK+DHQPA KPPLARRVL+FYR+FGFD+Q+VQ+TPP
Sbjct: 132 TPTSERERVSAHEPPILTLEDLQNAKSDHQPAMKPPLARRVLRFYRQFGFDEQIVQKTPP 191

Query: 187 SVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGDANFTEQPSK 246
            VRNS+PVQ   RVVSR+FQ SKS+QQGERIVSRYFQ+ E+ QA+HNED D N T+QP K
Sbjct: 192 PVRNSMPVQLDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQASHNEDEDVNATDQPIK 251

Query: 247 RSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNSEKSHE 306
           RS VG+Y KRRRKDVAPSSDNSKA Q S+ K+SRSV+KSG DKRVRIVSRYFQNSEK+ E
Sbjct: 252 RSGVGEYRKRRRKDVAPSSDNSKAYQRSIRKSSRSVKKSGTDKRVRIVSRYFQNSEKNPE 311

Query: 307 AEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRIREPAK 366
            E  VS +LQN  +NQQGERVVSRFFQ S +Q+VVNN+QEV +QP+QC K VKRIR+PAK
Sbjct: 312 VEIEVSPSLQNSKTNQQGERVVSRFFQKSEEQEVVNNQQEVTQQPSQCAKSVKRIRKPAK 371

Query: 367 ERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPWRVLVIC 426
           ERK RDK SARPR+ L A ELFLEAYRRKS DDTWKPPPSGIRLLQQDHAYDPWRVLVIC
Sbjct: 372 ERKVRDKVSARPRTTLSADELFLEAYRRKSPDDTWKPPPSGIRLLQQDHAYDPWRVLVIC 431

Query: 427 MLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQRLSEMY 486
           MLLNRT+GQQAK+VIPKLFTLCP+PK+ALEVS EQIEDIIRPLG QRKRS T+QRLSEMY
Sbjct: 432 MLLNRTTGQQAKEVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRSLTIQRLSEMY 491

Query: 487 LQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIKHLL 541
           L+ESWSHVTQLPGVGKYGADAHAIFCTGYW EVLPKDHMLNYYWEFLHSIKHLL
Sbjct: 492 LKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSIKHLL 537

[Close]

BLAST of Lcy03g000080 vs. NCBI nr
Match: XP_022931728.1 (methyl-CpG-binding domain protein 4-like protein [Cucurbita moschata])

HSP 1 Score: 767.7 bits (1981), Expect = 6.7e-218
Identity = 403/544 (74.08%), Postives = 455/544 (83.64%), Query Frame = 0


Query: 1   MISNLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILM 60
           M  NLS PSSSS+PD LFSQFAF+G S SRFRFP SKCP++SN++NPT E+ TQKR  LM
Sbjct: 7   MNPNLSPPSSSSFPDFLFSQFAFQGCSSSRFRFPPSKCPSESNRQNPTPEDFTQKRTTLM 66

Query: 61  AQATPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDP 120
           AQ +PIS L+ LQ SE N QK +   EIPIL IEDLQ+         PKR    L +ED 
Sbjct: 67  AQNSPISTLEVLQTSESNHQKTAAGQEIPILCIEDLQD--------NPKRGSSTLTVEDV 126

Query: 121 REVSPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQM 180
           +EVSP T +SE ER L HEPPILTLED+QNAK+DHQPA +PPLARRVL+FYR+FGFD+Q+
Sbjct: 127 QEVSPKTPTSERERVLVHEPPILTLEDIQNAKSDHQPAIEPPLARRVLRFYRQFGFDEQI 186

Query: 181 VQRTPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHN----EDG 240
           VQ+TPPSVRNS+PVQ+  RVVSR+FQ SKS+QQGERIVSRYFQ+ E+ +AAHN    ED 
Sbjct: 187 VQKTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDEDE 246

Query: 241 DANFTEQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSR 300
           D N T+QP KRS VG Y KRRRKDVA SSDNSKA Q S+ K+SR V++SG DKRVR VSR
Sbjct: 247 DVNVTDQPIKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRFVKESGTDKRVRFVSR 306

Query: 301 YFQNSEKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVK 360
           YFQNSEK+ E E  VS  LQN  + QQGER+VSRFFQ S +Q+VVNN+QEV++ P+QC K
Sbjct: 307 YFQNSEKNPEVEIEVSPPLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAK 366

Query: 361 PVKRIREPAKERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHA 420
            VKRIR+PAKERK RDK SARPR+ L A ELFLEAYRRKS+DDTWKPPPSGIRLLQQDHA
Sbjct: 367 SVKRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHA 426

Query: 421 YDPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRS 480
           YDPWRVLVICMLLNRT+GQQAK+VIPKLFTLCP+PK+ALEVS EQIEDIIRPLG QRKRS
Sbjct: 427 YDPWRVLVICMLLNRTTGQQAKEVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRS 486

Query: 481 RTMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSI 540
            T+QRLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW EVLPKDHMLNYYWEFLHSI
Sbjct: 487 LTIQRLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSI 542

[Close]

BLAST of Lcy03g000080 vs. NCBI nr
Match: XP_023529473.1 (methyl-CpG-binding domain protein 4-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 761.9 bits (1966), Expect = 3.7e-216
Identity = 403/542 (74.35%), Postives = 451/542 (83.21%), Query Frame = 0


Query: 1   MISNLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILM 60
           M  NLS PSSSS+PD       F     SRFRFP SKCP+ SN +NPT E+ TQKR  LM
Sbjct: 7   MNPNLSPPSSSSFPD-------FSVQCSSRFRFPPSKCPSDSNPQNPTPEDFTQKRTTLM 66

Query: 61  AQATPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDP 120
           AQ +PIS L+ LQ SE N QK +  HEIPIL IEDLQ+         PKR    L +ED 
Sbjct: 67  AQNSPISTLEVLQTSESNHQKTAVGHEIPILCIEDLQD--------NPKRGTSTLTVEDV 126

Query: 121 REVSPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQM 180
           ++VSP T +SE ER LAHEPPILTLEDLQNAK+DHQPA KPPLARRVL+FYR+FGFD+Q+
Sbjct: 127 QQVSPKTPTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFYRQFGFDEQI 186

Query: 181 VQRTPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHN--EDGDA 240
           VQ+TPPSVRNS+PVQ+  RVVSR+FQ SKS+QQGERIVSRYFQ+ E+ QAAHN  ED D 
Sbjct: 187 VQKTPPSVRNSMPVQRDERVVSRHFQESKSTQQGERIVSRYFQHSEIEQAAHNEDEDEDV 246

Query: 241 NFTEQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYF 300
           N T+QP KRS VG+Y KRRRKDVA SSDNSKA Q S+ K+SRSV+KSG+DKRVRIVSRYF
Sbjct: 247 NVTDQPIKRSRVGEYRKRRRKDVASSSDNSKAYQRSIRKSSRSVKKSGKDKRVRIVSRYF 306

Query: 301 QNSEKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPV 360
           QNSEK+ E E  VS +LQN  + QQGER+VSRFFQ S +Q+VVNN+QEV++ P+QC K V
Sbjct: 307 QNSEKNPEVEIEVSPSLQNSKTKQQGERIVSRFFQKSEEQEVVNNQQEVIQLPSQCAKSV 366

Query: 361 KRIREPAKERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYD 420
           KRIR+PAKERK RDK SARPR+ L A ELFLEAYRRKS+DDTWKPPPSGIRLLQQDHAYD
Sbjct: 367 KRIRKPAKERKVRDKVSARPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAYD 426

Query: 421 PWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRT 480
           PWRVLVICMLLNRT+GQQAKDVIPKLFTLCP+PK+ALEVS EQIEDIIRPLG QRKRS T
Sbjct: 427 PWRVLVICMLLNRTTGQQAKDVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRSLT 486

Query: 481 MQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIKH 540
           +QRLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW EVLPKDHMLNYYWEFLHSIKH
Sbjct: 487 IQRLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSIKH 533

[Close]

BLAST of Lcy03g000080 vs. NCBI nr
Match: XP_022969557.1 (methyl-CpG-binding domain protein 4-like protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 694.5 bits (1791), Expect = 7.2e-196
Identity = 365/483 (75.57%), Postives = 409/483 (84.68%), Query Frame = 0


Query: 60  MAQATPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLED 119
           MA  +PIS L+ LQ SE N QK +  HEIPIL IE LQ+         PKR I  L +ED
Sbjct: 1   MALNSPISTLEVLQTSEANHQKTAAGHEIPILCIEYLQD--------DPKREISTLTVED 60

Query: 120 PREVSPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQ 179
            +EVSP T +SE ER LAHEPPILTLEDLQNAK+DHQPA KPPLARRVL+F R+FGFD+Q
Sbjct: 61  VQEVSPKTPTSERERVLAHEPPILTLEDLQNAKSDHQPAIKPPLARRVLRFCRQFGFDEQ 120

Query: 180 MVQRTPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHN--EDGD 239
           +VQ+TPPSVRNS+PVQ+  RVVSR+FQ SKS+QQGERIVSRYFQ+ E+ +AAHN  ED D
Sbjct: 121 IVQKTPPSVRNSMPVQRDERVVSRHFQESKSNQQGERIVSRYFQHSEIERAAHNEDEDDD 180

Query: 240 ANFTEQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRY 299
            N T+QP KRS VG Y KRRRKDVA SSDNSKA Q S+ K+SRS++KSG DKRVRIVSRY
Sbjct: 181 VNVTDQPFKRSRVGQYRKRRRKDVASSSDNSKAYQRSIRKSSRSIKKSGTDKRVRIVSRY 240

Query: 300 FQNSEKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKP 359
           FQNSEK+ E E  VS +LQN  +NQQ ERVVSRFFQ S + +VVNN+QEV++ P+QC K 
Sbjct: 241 FQNSEKNPEVEIEVSPSLQNSKTNQQEERVVSRFFQKSEEHEVVNNQQEVIQLPSQCAKS 300

Query: 360 VKRIREPAKERKQRDKSSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAY 419
           VKRIR+PAKERK RDK SA+PR+ L A ELFLEAYRRKS+DDTWKPPPSGIRLLQQDHAY
Sbjct: 301 VKRIRKPAKERKVRDKVSAKPRTTLSADELFLEAYRRKSSDDTWKPPPSGIRLLQQDHAY 360

Query: 420 DPWRVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSR 479
           DPWRVLVICMLLNRT+GQQAK+VIPKLFTLCP+PK+ALEVS EQIEDIIRPLG QRKRS 
Sbjct: 361 DPWRVLVICMLLNRTTGQQAKEVIPKLFTLCPDPKSALEVSQEQIEDIIRPLGLQRKRSL 420

Query: 480 TMQRLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIK 539
           T+QRLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW EVLPKDHMLNYYWEFLHSIK
Sbjct: 421 TIQRLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWTEVLPKDHMLNYYWEFLHSIK 475

Query: 540 HLL 541
           HLL
Sbjct: 481 HLL 475

[Close]

BLAST of Lcy03g000080 vs. NCBI nr
Match: XP_008460559.1 (PREDICTED: methyl-CpG-binding domain protein 4-like protein [Cucumis melo])

HSP 1 Score: 617.8 bits (1592), Expect = 8.6e-173
Identity = 354/540 (65.56%), Postives = 390/540 (72.22%), Query Frame = 0


Query: 4   NLSSPSSSSYPDDLFSQFAFRGTSCSRFRFPSSKCPAKSNQENPTAENLTQKRRILMAQA 63
           NL+ PSSSSYP DLFS+F FRGTS SRFRFP    P+KS  +NP     +        Q 
Sbjct: 10  NLTPPSSSSYPHDLFSEFVFRGTSRSRFRFP----PSKSAHQNPNPYQDS-------TQH 69

Query: 64  TPISALQDLQNSEPNQQKQSFWHEIPILSIEDLQEVPPDHQSSQPKRNIPVLPLEDPREV 123
           +PIS L DLQ SEPN                        H  S          L  P   
Sbjct: 70  SPISTLYDLQTSEPNNH----------------------HNKS----------LASP--- 129

Query: 124 SPNTQSSEAERGLAHEPPILTLEDLQNAKADHQPAKKPPLARRVLQFYRKFGFDQQMVQR 183
                SSEA+     EPPILTLEDLQN K   Q  KKP LARRVL FYR+FGFD++++Q 
Sbjct: 130 -----SSEAD-----EPPILTLEDLQNGKLPLQSPKKPSLARRVLSFYREFGFDKKLLQA 189

Query: 184 TPPSVRNSVPVQQGVRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNED--GDANFT 243
           T  SV NS PVQ+G RVVSRYFQNS+S+QQ ERIVSRYF+     +AAH ED   D N T
Sbjct: 190 TSHSVLNSEPVQEGTRVVSRYFQNSRSTQQRERIVSRYFKKSVKERAAHYEDENDDGNLT 249

Query: 244 EQPSKRSMVGDYSKRRRKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNS 303
           EQPSKRS     SKRRRKDV PSS NSK N HSMGKTSRSVQKS  D R RIVS YFQ S
Sbjct: 250 EQPSKRS-----SKRRRKDVDPSSVNSKTNHHSMGKTSRSVQKSRTDTRARIVSGYFQYS 309

Query: 304 EKSHEAEQNVSRTLQNLNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRI 363
           EKS E ++ VS +LQN  SNQQ E++VSRFF  S KQQ VNN++E  EQ NQC K VKR+
Sbjct: 310 EKSLEMDREVSPSLQNSKSNQQEEKMVSRFFLKSGKQQAVNNQEEATEQLNQCAKSVKRV 369

Query: 364 REPAKERKQRDK-SSARPRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPW 423
           R+P  ERKQ++K SS +PR+ L AAELFLEAYRRKS DDTWKPPPSG RLLQ DHAYDPW
Sbjct: 370 RKPVNERKQKNKTSSTKPRTTLTAAELFLEAYRRKSPDDTWKPPPSGTRLLQHDHAYDPW 429

Query: 424 RVLVICMLLNRTSGQQAKDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQ 483
           RVLVICMLLNRTSG+QAK+VIPKLF+LCPNPKA LEVS EQIEDIIRPLG  RKRSRTM 
Sbjct: 430 RVLVICMLLNRTSGRQAKEVIPKLFSLCPNPKATLEVSREQIEDIIRPLGLYRKRSRTMH 488

Query: 484 RLSEMYLQESWSHVTQLPGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFLHSIKHLL 541
           RLSEMYL+ESWSHVTQLPGVGKYGADAHAIFCTGYW+EV PKDHMLNYYW+FLHSIKHLL
Sbjct: 490 RLSEMYLKESWSHVTQLPGVGKYGADAHAIFCTGYWSEVEPKDHMLNYYWDFLHSIKHLL 488

[Close]

BLAST of Lcy03g000080 vs. TAIR 10
Match: AT3G07930.3 (DNA glycosylase superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 5.7e-50
Identity = 131/336 (38.99%), Postives = 177/336 (52.68%), Query Frame = 0


Query: 198 VRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGDANFTEQPSKRSMVGDYSKRR 257
           VR VS YFQ S  SQQ +              +  +++G +    +  + S     S   
Sbjct: 146 VRRVSPYFQGSTVSQQSKEGCDS--------DSVCSKEGCSKVQAKVPRVSPYFQASTIS 205

Query: 258 RKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNSEKSHEAEQNVSRTLQN 317
           + D    S +     +  G + R V       +VR VS YFQ S  S +  Q   + L+N
Sbjct: 206 QCDSDIVSSSQSGRNYRKGSSKRQV-------KVRRVSPYFQESTVSEQPNQ-APKGLRN 265

Query: 318 LNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRIREPAKERKQRDKSSAR 377
                +    VSR+F     Q                      + E  KE+ +  + +  
Sbjct: 266 YFKVVK----VSRYFHADGIQ----------------------VNESQKEKSRNVRKTPI 325

Query: 378 PRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTSGQQA 437
               L  ++   + Y RK+ D+TW PP S   LLQ+DH +DPWRVLVICMLLN+TSG Q 
Sbjct: 326 VSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQT 385

Query: 438 KDVIPKLFTLCPNPKAALEVSHEQIEDIIRPLGFQRKRSRTMQRLSEMYLQESWSHVTQL 497
           + VI  LF LC + K A EV  E+IE++I+PLG Q+KR++ +QRLS  YLQESW+HVTQL
Sbjct: 386 RGVISDLFGLCTDAKTATEVKEEEIENLIKPLGLQKKRTKMIQRLSLEYLQESWTHVTQL 439

Query: 498 PGVGKYGADAHAIFCTGYWNEVLPKDHMLNYYWEFL 534
            GVGKY ADA+AIFC G W+ V P DHMLNYYW++L
Sbjct: 446 HGVGKYAADAYAIFCNGNWDRVKPNDHMLNYYWDYL 439

[Close]

BLAST of Lcy03g000080 vs. TAIR 10
Match: AT3G07930.2 (DNA glycosylase superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 9.0e-11
Identity = 71/239 (29.71%), Postives = 102/239 (42.68%), Query Frame = 0


Query: 198 VRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGDANFTEQPSKRSMVGDYSKRR 257
           VR VS YFQ S  SQQ +              +  +++G +    +  + S     S   
Sbjct: 146 VRRVSPYFQGSTVSQQSKEGCDS--------DSVCSKEGCSKVQAKVPRVSPYFQASTIS 205

Query: 258 RKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNSEKSHEAEQNVSRTLQN 317
           + D    S +     +  G + R V       +VR VS YFQ S  S +  Q   + L+N
Sbjct: 206 QCDSDIVSSSQSGRNYRKGSSKRQV-------KVRRVSPYFQESTVSEQPNQ-APKGLRN 265

Query: 318 LNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRIREPAKERKQRDKSSAR 377
                +    VSR+F     Q                      + E  KE+ +  + +  
Sbjct: 266 YFKVVK----VSRYFHADGIQ----------------------VNESQKEKSRNVRKTPI 325

Query: 378 PRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTSGQQ 437
               L  ++   + Y RK+ D+TW PP S   LLQ+DH +DPWRVLVICMLLN+TSG Q
Sbjct: 326 VSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTSGAQ 342

[Close]

BLAST of Lcy03g000080 vs. TAIR 10
Match: AT3G07930.1 (DNA glycosylase superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.7e-09
Identity = 69/236 (29.24%), Postives = 100/236 (42.37%), Query Frame = 0


Query: 198 VRVVSRYFQNSKSSQQGERIVSRYFQNPEVVQAAHNEDGDANFTEQPSKRSMVGDYSKRR 257
           VR VS YFQ S  SQQ +              +  +++G +    +  + S     S   
Sbjct: 146 VRRVSPYFQGSTVSQQSKEGCDS--------DSVCSKEGCSKVQAKVPRVSPYFQASTIS 205

Query: 258 RKDVAPSSDNSKANQHSMGKTSRSVQKSGRDKRVRIVSRYFQNSEKSHEAEQNVSRTLQN 317
           + D    S +     +  G + R V       +VR VS YFQ S  S +  Q   + L+N
Sbjct: 206 QCDSDIVSSSQSGRNYRKGSSKRQV-------KVRRVSPYFQESTVSEQPNQ-APKGLRN 265

Query: 318 LNSNQQGERVVSRFFQNSAKQQVVNNEQEVVEQPNQCVKPVKRIREPAKERKQRDKSSAR 377
                +    VSR+F     Q                      + E  KE+ +  + +  
Sbjct: 266 YFKVVK----VSRYFHADGIQ----------------------VNESQKEKSRNVRKTPI 325

Query: 378 PRSNLPAAELFLEAYRRKSADDTWKPPPSGIRLLQQDHAYDPWRVLVICMLLNRTS 434
               L  ++   + Y RK+ D+TW PP S   LLQ+DH +DPWRVLVICMLLN+TS
Sbjct: 326 VSPVLSLSQKTDDVYLRKTPDNTWVPPRSPCNLLQEDHWHDPWRVLVICMLLNKTS 339

The following BLAST results are available for this feature:

BLAST of Lcy03g000080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IGK1	8.1e-49	38.99	Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana OX=3702...	[more]
O95243	3.7e-25	36.43	Methyl-CpG-binding domain protein 4 OS=Homo sapiens OX=9606 GN=MBD4 PE=1 SV=1	[more]
Q9Z2D7	6.9e-24	35.00	Methyl-CpG-binding domain protein 4 OS=Mus musculus OX=10090 GN=Mbd4 PE=1 SV=1	[more]
Q7LX22	4.1e-08	34.02	Thymine/uracil-DNA glycosylase OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM...	[more]
Q9YDP0	2.0e-07	31.18	Thymine-DNA glycosylase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JC...	[more]

BLAST of Lcy03g000080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZJ4	3.2e-218	74.08	methyl-CpG-binding domain protein 4-like protein OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1HWM5	3.5e-196	75.57	methyl-CpG-binding domain protein 4-like protein isoform X1 OS=Cucurbita maxima ...	[more]
A0A1S3CCU6	4.2e-173	65.56	methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5D3CU57	4.0e-160	63.26	Methyl-CpG-binding domain protein 4-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0KRW9	9.3e-149	60.94	ENDO3c domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G630730 PE=4...	[more]

BLAST of Lcy03g000080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022375.1	9.7e-225	76.78	Methyl-CpG-binding domain protein 4-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022931728.1	6.7e-218	74.08	methyl-CpG-binding domain protein 4-like protein [Cucurbita moschata]	[more]
XP_023529473.1	3.7e-216	74.35	methyl-CpG-binding domain protein 4-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022969557.1	7.2e-196	75.57	methyl-CpG-binding domain protein 4-like protein isoform X1 [Cucurbita maxima]	[more]
XP_008460559.1	8.6e-173	65.56	PREDICTED: methyl-CpG-binding domain protein 4-like protein [Cucumis melo]	[more]

BLAST of Lcy03g000080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07930.3	5.7e-50	38.99	DNA glycosylase superfamily protein	[more]
AT3G07930.2	9.0e-11	29.71	DNA glycosylase superfamily protein	[more]
AT3G07930.1	1.7e-09	29.24	DNA glycosylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.30	Hypothetical protein; domain 2	coord: 390..540 e-value: 4.3E-46 score: 158.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..376
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..141
None	No IPR available	PANTHER	PTHR15074:SF0	METHYL-CPG-BINDING DOMAIN PROTEIN 4-RELATED	coord: 181..538
IPR003265	HhH-GPD domain	PFAM	PF00730	HhH-GPD	coord: 426..501 e-value: 4.6E-6 score: 27.0
IPR045138	Methyl-CpG binding protein MeCP2/MBD4	PANTHER	PTHR15074	METHYL-CPG-BINDING PROTEIN	coord: 181..538
IPR011257	DNA glycosylase	SUPERFAMILY	48150	DNA-glycosylase	coord: 406..534

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g000080.1	Lcy03g000080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006284	base-excision repair
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003677	DNA binding