Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAACCCAAAAGTTTTCTTCGACATCTTGATTGGGAAGATGAAAGCAGGCCGGATTGTCATGGAGCTTTTTGCAGACACAACTCCGAAAACTGCAGAGAATTTTCGAGCCCTCTGCACTGGGGAGAAGGGGATTGGAAGATCTGGGAAGCTTCTGCACTATAAAGGATCAACGTTTCACCGAATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTTACAAAAGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAGCACACGGGACCGGGTGTTCTATCGATGGCGAATGCTGGGCCGAACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTAGATGGTTATAATGTGGTACAGGAGATGGAGAAGGTGGGATCAGATAGTGGGAAGACTTCACAACCAGTTGTGATAGAGGACTGTGGGCAGATAGCTGAGAGTTGA
mRNA sequence
ATGTCCAACCCAAAAGTTTTCTTCGACATCTTGATTGGGAAGATGAAAGCAGGCCGGATTGTCATGGAGCTTTTTGCAGACACAACTCCGAAAACTGCAGAGAATTTTCGAGCCCTCTGCACTGGGGAGAAGGGGATTGGAAGATCTGGGAAGCTTCTGCACTATAAAGGATCAACGTTTCACCGAATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTTACAAAAGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAGCACACGGGACCGGGTGTTCTATCGATGGCGAATGCTGGGCCGAACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTAGATGGTTATAATGTGGTACAGGAGATGGAGAAGGTGGGATCAGATAGTGGGAAGACTTCACAACCAGTTGTGATAGAGGACTGTGGGCAGATAGCTGAGAGTTGA
Coding sequence (CDS)
ATGTCCAACCCAAAAGTTTTCTTCGACATCTTGATTGGGAAGATGAAAGCAGGCCGGATTGTCATGGAGCTTTTTGCAGACACAACTCCGAAAACTGCAGAGAATTTTCGAGCCCTCTGCACTGGGGAGAAGGGGATTGGAAGATCTGGGAAGCTTCTGCACTATAAAGGATCAACGTTTCACCGAATAATCCCCAACTTCATGTGCCAAGGAGGAGATTTTACAAAAGGTAATGGAACAGGAGGAGAATCAATCTATGGCTTGAAATTTGCAGATGAAAACTTCAAGATGAAGCACACGGGACCGGGTGTTCTATCGATGGCGAATGCTGGGCCGAACACCAATGGTTCTCAGTTCTTCATTTGCACTGAGAAGACTTCATGGCTGGATGGGAAGCATGTTGTGTTTGGGAAAGTTGTAGATGGTTATAATGTGGTACAGGAGATGGAGAAGGTGGGATCAGATAGTGGGAAGACTTCACAACCAGTTGTGATAGAGGACTGTGGGCAGATAGCTGAGAGTTGA
Protein sequence
MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTFHRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIAES
Homology
BLAST of Lag0035550 vs. NCBI nr
Match:
XP_022156642.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Momordica charantia])
HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 165/171 (96.49%), Postives = 169/171 (98.83%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGS+F
Sbjct: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSSF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKM+HTGPGVLSMANAGPNTNGSQFF
Sbjct: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMRHTGPGVLSMANAGPNTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQI 172
ICTEKT WLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTS+ VVIEDCGQ+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSETVVIEDCGQV 171
BLAST of Lag0035550 vs. NCBI nr
Match:
XP_022988225.1 (peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima] >XP_022988226.1 peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima])
HSP 1 Score: 346.3 bits (887), Expect = 1.6e-91
Identity = 164/174 (94.25%), Postives = 168/174 (96.55%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKG+GRSGKLLHYKGSTF
Sbjct: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF
Sbjct: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIAES 175
ICTEKT WLDGKHVVFGKVVDGY+VV+ ME VGSDSG T Q VVIEDCGQ+AES
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGSTKQTVVIEDCGQVAES 174
BLAST of Lag0035550 vs. NCBI nr
Match:
XP_022961274.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita moschata])
HSP 1 Score: 345.9 bits (886), Expect = 2.0e-91
Identity = 163/174 (93.68%), Postives = 168/174 (96.55%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKG+GRSGKLLHYKGSTF
Sbjct: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPG+LSMANAGPNTNGSQFF
Sbjct: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIAES 175
ICTEKT WLDGKHVVFGKVVDGY+VV+ ME VGSDSG T Q VVIEDCGQ+AES
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGSTKQTVVIEDCGQVAES 174
BLAST of Lag0035550 vs. NCBI nr
Match:
KAG7033434.1 (Peptidyl-prolyl cis-trans isomerase CYP19-3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 345.9 bits (886), Expect = 2.0e-91
Identity = 163/174 (93.68%), Postives = 168/174 (96.55%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKG+GRSGKLLHYKGSTF
Sbjct: 49 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTF 108
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPG+LSMANAGPNTNGSQFF
Sbjct: 109 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGPNTNGSQFF 168
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIAES 175
ICTEKT WLDGKHVVFGKVVDGY+VV+ ME VGSDSG T Q VVIEDCGQ+AES
Sbjct: 169 ICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGSTKQTVVIEDCGQVAES 222
BLAST of Lag0035550 vs. NCBI nr
Match:
XP_023532122.1 (peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 345.1 bits (884), Expect = 3.5e-91
Identity = 163/174 (93.68%), Postives = 169/174 (97.13%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKG+GRSGKLLHYKGSTF
Sbjct: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGMGRSGKLLHYKGSTF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPG+LSMANAGPNTNGSQFF
Sbjct: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIAES 175
ICTEKT WLDGKHVVFGKVVDGY+VV+ ME VGSDSG TSQ VVIEDCGQ+AE+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYSVVKAMENVGSDSGITSQTVVIEDCGQVAEN 174
BLAST of Lag0035550 vs. ExPASy Swiss-Prot
Match:
Q38867 (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana OX=3702 GN=CYP19-3 PE=2 SV=2)
HSP 1 Score: 315.1 bits (806), Expect = 5.0e-85
Identity = 144/171 (84.21%), Postives = 157/171 (91.81%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
M+NPKVFFDILIGKMKAGR+VMELFAD TP+TA NFRALCTGE GIG++GK LHYKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HRIIP FMCQGGDFT+GNGTGGESIYG KF DENFK+KHTGPG+LSMAN+GPNTNGSQFF
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQI 172
ICTEKTSWLDGKHVVFGKVVDGYNVV+ ME VGSD G S+ VVIEDCG++
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
BLAST of Lag0035550 vs. ExPASy Swiss-Prot
Match:
O49886 (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1)
HSP 1 Score: 302.0 bits (772), Expect = 4.4e-81
Identity = 139/172 (80.81%), Postives = 154/172 (89.53%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
MSNPKVFFD+ I AGRIVMEL+ADTTP+TAENFRALCTGEKG+GRSGK LHYKGSTF
Sbjct: 1 MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HR+IPNFMCQGGDFT GNGTG ESIYG KFADENF +HTGPG+LSMANAG TNGSQFF
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIA 173
ICTEKT WLDGKHVVFGKV++G NVV+++EKVGS SGKTS+PV I DCGQ++
Sbjct: 121 ICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172
BLAST of Lag0035550 vs. ExPASy Swiss-Prot
Match:
Q38900 (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana OX=3702 GN=CYP19-1 PE=2 SV=1)
HSP 1 Score: 300.8 bits (769), Expect = 9.8e-81
Identity = 137/171 (80.12%), Postives = 156/171 (91.23%), Query Frame = 0
Query: 2 SNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTFH 61
+NPKV+FD+ +G AGRIVMEL+ADTTP+TAENFRALCTGE+GIG+ GK LHYKGS+FH
Sbjct: 3 TNPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFH 62
Query: 62 RIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFFI 121
R+IP FMCQGGDFT GNGTGGESIYG KF DENF KHTGPG+LSMANAG NTNGSQFFI
Sbjct: 63 RVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFI 122
Query: 122 CTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIA 173
CTEKTSWLDGKHVVFG+VV+G NVV+++EKVGSDSG+TS+PVVI DCGQI+
Sbjct: 123 CTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
BLAST of Lag0035550 vs. ExPASy Swiss-Prot
Match:
Q8W171 (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1)
HSP 1 Score: 300.8 bits (769), Expect = 9.8e-81
Identity = 137/170 (80.59%), Postives = 154/170 (90.59%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
M NPKVFFD+ IG AGRIVMEL+AD TP+TAENFRALCTGEKG+GRSGK LHYKGS+F
Sbjct: 1 MPNPKVFFDMTIGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HR+IP+FMCQGGDFT GNGTGGESIYG KFADENF KHTGPG+LSMANAGP TNGSQFF
Sbjct: 61 HRVIPSFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQ 171
ICTEKT WLDGKHVVFG+V++G NVV+++EKVGS SG+TS+PVVI +CGQ
Sbjct: 121 ICTEKTEWLDGKHVVFGQVIEGLNVVKDIEKVGSGSGRTSKPVVIANCGQ 170
BLAST of Lag0035550 vs. ExPASy Swiss-Prot
Match:
Q39613 (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 5.4e-79
Identity = 135/172 (78.49%), Postives = 153/172 (88.95%), Query Frame = 0
Query: 1 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKLLHYKGSTF 60
M NP+VFFD+ +G AGRIVMELFADTTP+TAENFRALCTGEKG GRSGK LHYK S+F
Sbjct: 1 MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60
Query: 61 HRIIPNFMCQGGDFTKGNGTGGESIYGLKFADENFKMKHTGPGVLSMANAGPNTNGSQFF 120
HR+IP FMCQGGDFT GNGTGGESIYG KFADENF KHTGPG+LSMANAGPNTNGSQFF
Sbjct: 61 HRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFF 120
Query: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVQEMEKVGSDSGKTSQPVVIEDCGQIA 173
ICT KT WLDGKHVVFG+VV+G +VV+ +EKVGS SG+T++ VV+EDCGQ++
Sbjct: 121 ICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022156642.1 | 1.4e-92 | 96.49 | peptidyl-prolyl cis-trans isomerase CYP19-3 [Momordica charantia] | [more] |
XP_022988225.1 | 1.6e-91 | 94.25 | peptidyl-prolyl cis-trans isomerase CYP19-3-like [Cucurbita maxima] >XP_02298822... | [more] |
XP_022961274.1 | 2.0e-91 | 93.68 | peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita moschata] | [more] |
KAG7033434.1 | 2.0e-91 | 93.68 | Peptidyl-prolyl cis-trans isomerase CYP19-3, partial [Cucurbita argyrosperma sub... | [more] |
XP_023532122.1 | 3.5e-91 | 93.68 | peptidyl-prolyl cis-trans isomerase CYP19-3 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Q38867 | 5.0e-85 | 84.21 | Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana OX=3702 GN=C... | [more] |
O49886 | 4.4e-81 | 80.81 | Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus OX=3873 PE=2 SV=1 | [more] |
Q38900 | 9.8e-81 | 80.12 | Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana OX=3702 GN=C... | [more] |
Q8W171 | 9.8e-81 | 80.59 | Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max OX=3847 GN=Cyp1 PE=2 SV=1 | [more] |
Q39613 | 5.4e-79 | 78.49 | Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus OX=4058 GN=PCKR1 PE=1... | [more] |