Lag0027851 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACCATTAGGGCCGATATTGCAGAATTAGCTAACGCTCTTAAAAACATAACTGTGGTAAGTAATGTTCAGCAGTTGCCAGTGGTGGAGCTTGTTGCAGTTGTAAACCAAGTGGCAGCAAATCTTGTGTCTATTGTGGTGAAAAGCATAATTATGAGTTTTTCCTAACAATCCAACTTCTGTGTTTTTTGTAGGTAATCAAAGGAATAACCCTATTCAAATTTTTATAATTCAGGTTGGTGTAACCACCCAACTTTGCATGGGGAGGGCAAGGAAGCAATTCGCGAGCCCCCAAGCACAACAAAAGGTGGTGAACCAGTTCGAATTTGCTAAATCACAGGCATTGCCCCAACAAAATAAGCTGGCTACCCATCCAAACTCGGGTAATTCTCTGGAGTTAATGATGAAGGATTATATGGCTCGTAATGATGTCTTAATCCAAAGTCACCAAGCTTCATTGAGAGTCCTAGAGTTTCAAGTGGACCAGCTAGCTAATGAGCTGAAGGCACGACTTCCGGGAACATTCCTTCATATATTGAACACCCTATAA ATGTCTACCATTAGGGCCGATATTGCAGAATTAGCTAACGCTCTTAAAAACATAACTGTGGTAAGTAATGTTCAGCAGTTGCCAGTGGTGGAGCTTGTTGCAGTTGTAAACCAAGTGGCAGCAAATCTTGTGTCTATTGTGGTTGGTGTAACCACCCAACTTTGCATGGGGAGGGCAAGGAAGCAATTCGCGAGCCCCCAAGCACAACAAAAGGTGGTGAACCAGTTCGAATTTGCTAAATCACAGGCATTGCCCCAACAAAATAAGCTGGCTACCCATCCAAACTCGGGTAATTCTCTGGAGTTAATGATGAAGGATTATATGGCTCGTAATGATGTCTTAATCCAAAGTCACCAAGCTTCATTGAGAGTCCTAGAGTTTCAAGTGGACCAGCTAGCTAATGAGCTGAAGGCACGACTTCCGGGAACATTCCTTCATATATTGAACACCCTATAA ATGTCTACCATTAGGGCCGATATTGCAGAATTAGCTAACGCTCTTAAAAACATAACTGTGGTAAGTAATGTTCAGCAGTTGCCAGTGGTGGAGCTTGTTGCAGTTGTAAACCAAGTGGCAGCAAATCTTGTGTCTATTGTGGTTGGTGTAACCACCCAACTTTGCATGGGGAGGGCAAGGAAGCAATTCGCGAGCCCCCAAGCACAACAAAAGGTGGTGAACCAGTTCGAATTTGCTAAATCACAGGCATTGCCCCAACAAAATAAGCTGGCTACCCATCCAAACTCGGGTAATTCTCTGGAGTTAATGATGAAGGATTATATGGCTCGTAATGATGTCTTAATCCAAAGTCACCAAGCTTCATTGAGAGTCCTAGAGTTTCAAGTGGACCAGCTAGCTAATGAGCTGAAGGCACGACTTCCGGGAACATTCCTTCATATATTGAACACCCTATAA MSTIRADIAELANALKNITVVSNVQQLPVVELVAVVNQVAANLVSIVVGVTTQLCMGRARKQFASPQAQQKVVNQFEFAKSQALPQQNKLATHPNSGNSLELMMKDYMARNDVLIQSHQASLRVLEFQVDQLANELKARLPGTFLHILNTL Homology
BLAST of Lag0027851 vs. NCBI nr
Match: XP_030504954.1 (uncharacterized protein LOC115719921 [Cannabis sativa]) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-05 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of Lag0027851 vs. NCBI nr
Match: XP_030478190.1 (uncharacterized protein LOC115695250 [Cannabis sativa]) HSP 1 Score: 58.5 bits (140), Expect = 5.6e-05 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0
BLAST of Lag0027851 vs. NCBI nr
Match: XP_023521781.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785639, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 57.8 bits (138), Expect = 9.6e-05 Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Lag0027851 vs. NCBI nr
Match: KAA3473721.1 (retroelement pol polyprotein-like [Gossypium australe]) HSP 1 Score: 57.8 bits (138), Expect = 9.6e-05 Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of Lag0027851 vs. NCBI nr
Match: XP_030502440.1 (uncharacterized protein LOC115717596 [Cannabis sativa]) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-04 Identity = 54/160 (33.75%), Postives = 78/160 (48.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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